View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2838_high_9 (Length: 262)
Name: NF2838_high_9
Description: NF2838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2838_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 76 - 249
Target Start/End: Complemental strand, 43055371 - 43055198
Alignment:
| Q |
76 |
gatctgcgtttattacacttcacaacaaaaattgtatactgtttaggcacaatgtataatcaaaacgacataggttccacttaattaattaattaaataa |
175 |
Q |
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| T |
43055371 |
gatctgcgtttattacacttcacaacaaaaattgtatactgtttaggcacaatgtataatcaaaacgacataggttccacttaattaattaattaaataa |
43055272 |
T |
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| Q |
176 |
tttgttaattatcagaaaaagagcaacagtttcattcaattcaattcaagtcaagtcaaattctcttctctgct |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
43055271 |
tttgttaattatcagaaaaagagcaacagtttcattcaattcaattcaagtcaagtcaaattatcttctctgct |
43055198 |
T |
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