View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2839_high_3 (Length: 529)

Name: NF2839_high_3
Description: NF2839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2839_high_3
NF2839_high_3
[»] chr4 (55 HSPs)
chr4 (238-410)||(5834824-5834996)
chr4 (14-151)||(5835080-5835217)
chr4 (268-407)||(28376993-28377132)
chr4 (238-407)||(42472521-42472690)
chr4 (265-404)||(8064088-8064227)
chr4 (265-399)||(19738702-19738836)
chr4 (238-407)||(52122811-52122990)
chr4 (265-404)||(5325700-5325839)
chr4 (26-150)||(8063841-8063965)
chr4 (238-407)||(41145609-41145779)
chr4 (265-406)||(53322335-53322476)
chr4 (238-404)||(38492221-38492377)
chr4 (252-394)||(52721274-52721416)
chr4 (26-151)||(3403318-3403443)
chr4 (26-151)||(14795256-14795381)
chr4 (14-123)||(28377174-28377284)
chr4 (272-410)||(55901125-55901263)
chr4 (26-151)||(5325457-5325582)
chr4 (252-404)||(36511899-36512052)
chr4 (26-144)||(52572451-52572564)
chr4 (252-404)||(40694070-40694222)
chr4 (253-404)||(2586336-2586487)
chr4 (26-144)||(31226594-31226712)
chr4 (265-406)||(37992511-37992653)
chr4 (272-397)||(17892255-17892380)
chr4 (265-398)||(46431912-46432045)
chr4 (26-140)||(41145873-41145987)
chr4 (238-328)||(14795078-14795168)
chr4 (26-144)||(53322596-53322714)
chr4 (305-404)||(1176981-1177080)
chr4 (265-395)||(4400477-4400607)
chr4 (343-409)||(14795018-14795084)
chr4 (252-338)||(39957630-39957716)
chr4 (265-405)||(3403564-3403694)
chr4 (287-407)||(47607107-47607226)
chr4 (305-399)||(51858837-51858931)
chr4 (307-395)||(27981905-27981993)
chr4 (252-328)||(31946192-31946268)
chr4 (96-151)||(19738948-19739003)
chr4 (272-335)||(24793717-24793780)
chr4 (238-313)||(31226044-31226119)
chr4 (80-151)||(42472375-42472446)
chr4 (330-407)||(10257697-10257774)
chr4 (293-394)||(21058843-21058944)
chr4 (330-394)||(44121886-44121950)
chr4 (286-349)||(7429192-7429255)
chr4 (284-335)||(21637734-21637785)
chr4 (252-315)||(52572278-52572340)
chr4 (343-396)||(31946262-31946315)
chr4 (286-338)||(42630485-42630537)
chr4 (283-326)||(4119502-4119545)
chr4 (322-405)||(24296497-24296580)
chr4 (323-406)||(51674856-51674939)
chr4 (14-64)||(43509763-43509813)
chr4 (103-151)||(52122682-52122730)
[»] chr3 (69 HSPs)
chr3 (238-406)||(35389748-35389916)
chr3 (14-144)||(28882410-28882540)
chr3 (238-410)||(7327706-7327878)
chr3 (238-397)||(28882630-28882789)
chr3 (14-151)||(22310980-22311117)
chr3 (238-407)||(1679650-1679819)
chr3 (238-409)||(52121175-52121346)
chr3 (14-151)||(35390000-35390137)
chr3 (265-407)||(40497327-40497469)
chr3 (265-406)||(22310703-22310844)
chr3 (18-151)||(50287081-50287213)
chr3 (238-362)||(33239992-33240116)
chr3 (265-409)||(37996790-37996934)
chr3 (250-408)||(55268980-55269134)
chr3 (254-404)||(6134350-6134500)
chr3 (16-150)||(52121414-52121547)
chr3 (265-398)||(25937043-25937176)
chr3 (265-404)||(48122825-48122964)
chr3 (26-144)||(10224895-10225013)
chr3 (265-407)||(28704724-28704866)
chr3 (26-151)||(48123073-48123199)
chr3 (26-151)||(28704986-28705111)
chr3 (265-406)||(42464886-42465027)
chr3 (26-151)||(52505567-52505692)
chr3 (284-404)||(13748445-13748565)
chr3 (265-397)||(52684208-52684340)
chr3 (26-144)||(42464677-42464795)
chr3 (238-348)||(45532932-45533042)
chr3 (26-151)||(1679442-1679567)
chr3 (252-399)||(28968515-28968662)
chr3 (252-407)||(41742038-41742193)
chr3 (265-409)||(10225141-10225274)
chr3 (252-407)||(22611350-22611495)
chr3 (282-394)||(30226430-30226542)
chr3 (265-408)||(52505812-52505954)
chr3 (265-394)||(42229684-42229813)
chr3 (273-396)||(22289708-22289831)
chr3 (265-411)||(53192491-53192627)
chr3 (252-406)||(21157695-21157849)
chr3 (287-396)||(983202-983311)
chr3 (286-406)||(2122702-2122825)
chr3 (265-407)||(2567377-2567508)
chr3 (252-407)||(45347296-45347450)
chr3 (253-395)||(20510123-20510265)
chr3 (265-397)||(1528509-1528630)
chr3 (306-398)||(29915867-29915959)
chr3 (306-398)||(29965020-29965112)
chr3 (286-407)||(30787562-30787683)
chr3 (252-351)||(19421469-19421568)
chr3 (252-394)||(19879069-19879201)
chr3 (40-151)||(25936818-25936929)
chr3 (252-407)||(25700759-25700913)
chr3 (307-407)||(38889101-38889200)
chr3 (355-405)||(19420904-19420954)
chr3 (80-151)||(53192738-53192809)
chr3 (284-386)||(3983715-3983817)
chr3 (284-394)||(39663968-39664078)
chr3 (252-338)||(47642072-47642158)
chr3 (252-396)||(7899684-7899829)
chr3 (335-406)||(21006534-21006605)
chr3 (341-394)||(49419245-49419298)
chr3 (332-396)||(13353232-13353296)
chr3 (252-336)||(25322438-25322522)
chr3 (265-351)||(15768980-15769066)
chr3 (332-397)||(19349636-19349701)
chr3 (355-396)||(47642025-47642066)
chr3 (284-328)||(5271545-5271589)
chr3 (306-338)||(7899669-7899701)
chr3 (119-151)||(45532821-45532853)
[»] chr8 (63 HSPs)
chr8 (238-407)||(32877434-32877603)
chr8 (239-407)||(36483432-36483600)
chr8 (265-407)||(6028484-6028626)
chr8 (238-406)||(2872863-2873030)
chr8 (238-407)||(4245937-4246106)
chr8 (239-408)||(45217173-45217342)
chr8 (265-408)||(22201316-22201459)
chr8 (14-151)||(6028740-6028877)
chr8 (14-151)||(19947706-19947843)
chr8 (265-407)||(34901361-34901503)
chr8 (265-406)||(25022123-25022264)
chr8 (239-407)||(32759370-32759548)
chr8 (265-407)||(16384614-16384756)
chr8 (14-151)||(19436502-19436639)
chr8 (14-151)||(19572651-19572788)
chr8 (265-407)||(43771683-43771825)
chr8 (240-409)||(37668577-37668746)
chr8 (265-395)||(19947976-19948105)
chr8 (26-150)||(34901115-34901239)
chr8 (238-410)||(13422202-13422384)
chr8 (265-407)||(28876544-28876687)
chr8 (14-144)||(42949326-42949456)
chr8 (26-151)||(4246176-4246301)
chr8 (18-134)||(25022417-25022537)
chr8 (26-151)||(45216966-45217091)
chr8 (14-147)||(32877710-32877842)
chr8 (408-513)||(27508197-27508304)
chr8 (26-151)||(43771438-43771563)
chr8 (238-410)||(12580495-12580677)
chr8 (26-144)||(28876311-28876429)
chr8 (26-151)||(5539669-5539794)
chr8 (26-151)||(36483684-36483804)
chr8 (26-138)||(32638681-32638793)
chr8 (254-397)||(32424928-32425071)
chr8 (238-395)||(32638818-32638965)
chr8 (287-408)||(37372255-37372376)
chr8 (429-513)||(10716071-10716155)
chr8 (284-407)||(38388664-38388787)
chr8 (270-336)||(42949198-42949264)
chr8 (272-399)||(5818297-5818424)
chr8 (275-398)||(27886196-27886319)
chr8 (275-398)||(27944854-27944977)
chr8 (26-151)||(37668830-37668949)
chr8 (277-407)||(29355620-29355750)
chr8 (272-398)||(27968109-27968237)
chr8 (272-398)||(28025095-28025223)
chr8 (291-406)||(3891960-3892075)
chr8 (26-145)||(12580272-12580386)
chr8 (265-406)||(19436272-19436399)
chr8 (265-406)||(19572421-19572548)
chr8 (272-350)||(17702549-17702627)
chr8 (332-406)||(40412433-40412507)
chr8 (328-397)||(7411643-7411712)
chr8 (252-398)||(20182380-20182525)
chr8 (291-387)||(30804750-30804846)
chr8 (317-399)||(32686-32768)
chr8 (287-328)||(5539500-5539541)
chr8 (265-310)||(40412508-40412553)
chr8 (284-328)||(12357954-12357998)
chr8 (284-328)||(12359082-12359126)
chr8 (272-336)||(24100179-24100243)
chr8 (96-151)||(16384877-16384932)
chr8 (360-404)||(28737255-28737299)
[»] chr7 (73 HSPs)
chr7 (238-404)||(1043023-1043189)
chr7 (14-151)||(19510762-19510899)
chr7 (262-406)||(19510518-19510662)
chr7 (265-409)||(40095642-40095786)
chr7 (14-144)||(8028953-8029083)
chr7 (252-407)||(25969391-25969547)
chr7 (265-409)||(27353913-27354057)
chr7 (269-407)||(26773695-26773833)
chr7 (265-407)||(34238152-34238294)
chr7 (265-407)||(48163402-48163544)
chr7 (14-151)||(16564085-16564221)
chr7 (14-151)||(16601441-16601577)
chr7 (238-395)||(34122569-34122726)
chr7 (14-151)||(4291804-4291945)
chr7 (238-410)||(27397999-27398171)
chr7 (238-407)||(38262993-38263172)
chr7 (238-406)||(11829684-11829862)
chr7 (265-407)||(16850780-16850922)
chr7 (284-393)||(9250420-9250529)
chr7 (26-150)||(40095907-40096031)
chr7 (238-406)||(4291507-4291664)
chr7 (14-123)||(1042912-1043021)
chr7 (34-151)||(26773449-26773565)
chr7 (238-408)||(39520793-39520952)
chr7 (26-144)||(39521026-39521144)
chr7 (238-406)||(42896997-42897154)
chr7 (265-406)||(27555348-27555489)
chr7 (265-396)||(26845875-26846006)
chr7 (28-151)||(36660717-36660838)
chr7 (238-399)||(36202740-36202891)
chr7 (253-406)||(44960102-44960255)
chr7 (265-360)||(8028738-8028833)
chr7 (26-145)||(11829955-11830069)
chr7 (272-406)||(33454065-33454199)
chr7 (266-407)||(47238597-47238728)
chr7 (238-329)||(36660550-36660640)
chr7 (305-399)||(23079059-23079153)
chr7 (241-328)||(16564325-16564421)
chr7 (241-328)||(16601241-16601337)
chr7 (286-406)||(38064590-38064710)
chr7 (284-407)||(21409385-21409508)
chr7 (287-393)||(11058360-11058466)
chr7 (272-397)||(35159869-35159994)
chr7 (265-407)||(24956244-24956387)
chr7 (257-334)||(47720143-47720220)
chr7 (282-394)||(8056330-8056438)
chr7 (284-395)||(1363010-1363121)
chr7 (80-151)||(34238403-34238474)
chr7 (254-407)||(554858-555001)
chr7 (252-398)||(44269729-44269874)
chr7 (265-390)||(18113918-18114043)
chr7 (355-398)||(16564427-16564470)
chr7 (355-398)||(16601192-16601235)
chr7 (80-151)||(26843779-26843850)
chr7 (103-150)||(27397865-27397912)
chr7 (284-395)||(49015068-49015175)
chr7 (285-338)||(19820863-19820916)
chr7 (284-336)||(23311787-23311839)
chr7 (305-341)||(23970076-23970112)
chr7 (252-336)||(26973118-26973202)
chr7 (282-330)||(38064736-38064784)
chr7 (103-151)||(42897226-42897274)
chr7 (113-144)||(34122430-34122461)
chr7 (252-395)||(40041385-40041527)
chr7 (252-326)||(21179911-21179985)
chr7 (272-390)||(23970112-23970230)
chr7 (317-395)||(48153620-48153698)
chr7 (305-338)||(15878374-15878407)
chr7 (343-404)||(15878401-15878462)
chr7 (286-326)||(7416689-7416729)
chr7 (356-404)||(36758066-36758114)
chr7 (356-404)||(36767590-36767638)
chr7 (103-151)||(38265024-38265072)
[»] scaffold0250 (2 HSPs)
scaffold0250 (238-409)||(5507-5678)
scaffold0250 (14-151)||(5781-5918)
[»] chr1 (63 HSPs)
chr1 (238-409)||(13012944-13013115)
chr1 (14-151)||(31653146-31653283)
chr1 (265-407)||(37346827-37346969)
chr1 (14-144)||(14334415-14334545)
chr1 (238-404)||(20409506-20409672)
chr1 (14-151)||(13012720-13012857)
chr1 (265-409)||(6916853-6916997)
chr1 (14-150)||(37346686-37346822)
chr1 (265-404)||(37104120-37104259)
chr1 (265-408)||(52895692-52895835)
chr1 (265-407)||(38330424-38330566)
chr1 (238-408)||(1036455-1036635)
chr1 (14-151)||(43189894-43190031)
chr1 (265-407)||(28949220-28949362)
chr1 (265-407)||(31653381-31653523)
chr1 (265-407)||(43189652-43189794)
chr1 (238-408)||(1043223-1043403)
chr1 (238-395)||(28659252-28659409)
chr1 (265-407)||(3426845-3426987)
chr1 (26-151)||(8132419-8132544)
chr1 (26-150)||(6916608-6916732)
chr1 (26-150)||(38330687-38330811)
chr1 (26-150)||(52895447-52895571)
chr1 (238-360)||(14334204-14334326)
chr1 (253-406)||(48715192-48715345)
chr1 (252-407)||(9781639-9781794)
chr1 (265-407)||(8132180-8132322)
chr1 (408-513)||(39212596-39212702)
chr1 (26-151)||(3427109-3427234)
chr1 (282-406)||(3708274-3708399)
chr1 (26-151)||(25256862-25256987)
chr1 (272-399)||(5984232-5984359)
chr1 (265-407)||(2364674-2364816)
chr1 (238-399)||(30323720-30323882)
chr1 (25-151)||(30323966-30324091)
chr1 (26-151)||(28659052-28659177)
chr1 (238-407)||(38948729-38948908)
chr1 (252-394)||(29167957-29168099)
chr1 (26-151)||(5984433-5984558)
chr1 (238-395)||(25256625-25256781)
chr1 (272-407)||(34432369-34432504)
chr1 (305-407)||(2472873-2472975)
chr1 (265-395)||(36367681-36367801)
chr1 (253-399)||(41675956-41676102)
chr1 (286-396)||(14167092-14167202)
chr1 (305-406)||(29861799-29861900)
chr1 (265-399)||(32381038-32381172)
chr1 (265-395)||(40776004-40776134)
chr1 (284-396)||(10822410-10822523)
chr1 (80-151)||(28948745-28948816)
chr1 (284-407)||(34096550-34096673)
chr1 (250-351)||(24851527-24851628)
chr1 (306-390)||(9528859-9528943)
chr1 (80-151)||(20409318-20409389)
chr1 (265-394)||(41027925-41028053)
chr1 (287-359)||(2222980-2223052)
chr1 (112-151)||(38948987-38949026)
chr1 (252-402)||(33039615-33039764)
chr1 (285-397)||(10763668-10763778)
chr1 (253-326)||(38218461-38218534)
chr1 (354-398)||(38218404-38218448)
chr1 (356-406)||(24849362-24849412)
chr1 (103-151)||(1043489-1043537)
[»] chr6 (29 HSPs)
chr6 (14-151)||(31740546-31740683)
chr6 (238-406)||(32130611-32130779)
chr6 (14-151)||(32130389-32130526)
chr6 (265-407)||(1036805-1036947)
chr6 (238-410)||(7188731-7188900)
chr6 (265-394)||(31195848-31195977)
chr6 (256-408)||(3212473-3212625)
chr6 (252-395)||(8356967-8357110)
chr6 (26-150)||(1036560-1036684)
chr6 (266-406)||(25834476-25834616)
chr6 (253-407)||(26327152-26327305)
chr6 (26-151)||(7188524-7188649)
chr6 (287-407)||(27083982-27084102)
chr6 (284-410)||(234300-234426)
chr6 (284-395)||(32017986-32018097)
chr6 (252-394)||(19128163-19128305)
chr6 (253-406)||(6708008-6708161)
chr6 (242-397)||(31741124-31741267)
chr6 (286-406)||(3299139-3299259)
chr6 (296-404)||(13607795-13607903)
chr6 (287-408)||(10894584-10894694)
chr6 (103-151)||(8357208-8357256)
chr6 (272-395)||(11105295-11105418)
chr6 (343-397)||(31079619-31079673)
chr6 (284-389)||(22989332-22989437)
chr6 (284-389)||(23798960-23799065)
chr6 (332-396)||(7254938-7255002)
chr6 (306-398)||(13061325-13061417)
chr6 (284-329)||(10894519-10894564)
[»] chr5 (55 HSPs)
chr5 (238-407)||(1639735-1639903)
chr5 (238-407)||(32728661-32728830)
chr5 (239-407)||(10656817-10656984)
chr5 (238-407)||(32707773-32707952)
chr5 (252-409)||(30777487-30777645)
chr5 (265-407)||(39690742-39690884)
chr5 (18-151)||(5985812-5985945)
chr5 (252-407)||(26716270-26716425)
chr5 (252-407)||(26986010-26986165)
chr5 (34-151)||(10657091-10657208)
chr5 (249-408)||(9792315-9792474)
chr5 (265-406)||(30918376-30918517)
chr5 (265-406)||(32624875-32625016)
chr5 (26-151)||(33830010-33830135)
chr5 (253-397)||(30284574-30284718)
chr5 (252-406)||(1795390-1795545)
chr5 (26-144)||(26794737-26794855)
chr5 (282-404)||(33829753-33829875)
chr5 (26-151)||(12852359-12852484)
chr5 (238-395)||(41392654-41392821)
chr5 (26-144)||(30918608-30918726)
chr5 (26-151)||(1639526-1639651)
chr5 (252-399)||(26691621-26691768)
chr5 (252-399)||(26961353-26961500)
chr5 (238-407)||(12852116-12852276)
chr5 (265-409)||(26794983-26795116)
chr5 (285-396)||(11906226-11906337)
chr5 (294-396)||(22774562-22774664)
chr5 (282-394)||(3934784-3934896)
chr5 (268-376)||(5986050-5986158)
chr5 (252-399)||(17138220-17138366)
chr5 (252-406)||(5612408-5612562)
chr5 (26-151)||(9792550-9792670)
chr5 (272-395)||(34032378-34032501)
chr5 (272-398)||(5721993-5722119)
chr5 (285-407)||(6243168-6243279)
chr5 (241-328)||(7977317-7977404)
chr5 (285-395)||(14836390-14836500)
chr5 (286-394)||(15066148-15066256)
chr5 (306-406)||(35746271-35746371)
chr5 (80-151)||(39690267-39690338)
chr5 (252-351)||(43357725-43357824)
chr5 (284-336)||(21251533-21251585)
chr5 (80-151)||(7977488-7977559)
chr5 (306-395)||(41233388-41233477)
chr5 (282-394)||(42366099-42366211)
chr5 (353-404)||(7629070-7629121)
chr5 (80-151)||(32625134-32625205)
chr5 (112-151)||(41392535-41392574)
chr5 (287-380)||(1920860-1920953)
chr5 (252-402)||(27938165-27938311)
chr5 (285-336)||(27085432-27085483)
chr5 (284-365)||(9653804-9653885)
chr5 (285-369)||(3701233-3701317)
chr5 (103-151)||(32707644-32707692)
[»] chr2 (56 HSPs)
chr2 (14-151)||(18301232-18301369)
chr2 (14-151)||(5371212-5371349)
chr2 (265-407)||(7876711-7876853)
chr2 (14-144)||(12819459-12819589)
chr2 (272-407)||(38602308-38602443)
chr2 (253-407)||(16561797-16561951)
chr2 (238-408)||(33324814-33324994)
chr2 (238-407)||(18300969-18301148)
chr2 (265-408)||(40308876-40309019)
chr2 (265-407)||(4170481-4170623)
chr2 (238-404)||(22484267-22484433)
chr2 (252-405)||(2319274-2319427)
chr2 (265-407)||(7807353-7807495)
chr2 (238-407)||(20536772-20536931)
chr2 (265-398)||(6497628-6497761)
chr2 (265-407)||(6124170-6124312)
chr2 (252-396)||(4355333-4355477)
chr2 (26-150)||(6124437-6124561)
chr2 (252-407)||(28746622-28746773)
chr2 (15-151)||(20536975-20537110)
chr2 (252-396)||(35996651-35996794)
chr2 (252-407)||(1776402-1776557)
chr2 (252-397)||(34146187-34146332)
chr2 (26-150)||(40308582-40308705)
chr2 (252-398)||(35342323-35342470)
chr2 (26-151)||(22484515-22484641)
chr2 (26-151)||(4170259-4170379)
chr2 (26-151)||(6497409-6497529)
chr2 (265-398)||(8482896-8483029)
chr2 (287-404)||(22570937-22571054)
chr2 (252-404)||(44156597-44156750)
chr2 (252-407)||(4561785-4561941)
chr2 (429-508)||(12150798-12150877)
chr2 (284-397)||(14217152-14217265)
chr2 (238-301)||(5371057-5371120)
chr2 (252-407)||(31236152-31236307)
chr2 (285-387)||(40497384-40497486)
chr2 (283-404)||(24585530-24585650)
chr2 (287-395)||(1005522-1005629)
chr2 (272-394)||(25933575-25933697)
chr2 (332-406)||(45159344-45159418)
chr2 (80-151)||(7876964-7877035)
chr2 (265-404)||(21104482-21104621)
chr2 (287-393)||(12206036-12206142)
chr2 (252-336)||(3563908-3563992)
chr2 (303-407)||(5588104-5588208)
chr2 (80-151)||(16562059-16562130)
chr2 (253-396)||(3545547-3545691)
chr2 (287-395)||(37134299-37134407)
chr2 (112-151)||(22571200-22571239)
chr2 (296-395)||(43214581-43214682)
chr2 (362-404)||(3563851-3563893)
chr2 (344-398)||(14824154-14824208)
chr2 (355-407)||(12819298-12819350)
chr2 (103-151)||(33325080-33325128)
chr2 (103-151)||(38602133-38602181)
[»] scaffold0640 (2 HSPs)
scaffold0640 (238-408)||(8034-8214)
scaffold0640 (103-151)||(7900-7948)
[»] scaffold0060 (2 HSPs)
scaffold0060 (265-407)||(30423-30565)
scaffold0060 (26-144)||(30181-30299)
[»] scaffold0037 (2 HSPs)
scaffold0037 (241-410)||(27746-27905)
scaffold0037 (26-144)||(27523-27646)
[»] scaffold0005 (3 HSPs)
scaffold0005 (26-151)||(44350-44475)
scaffold0005 (238-328)||(44563-44653)
scaffold0005 (355-409)||(44659-44713)
[»] scaffold0112 (2 HSPs)
scaffold0112 (238-404)||(42028-42183)
scaffold0112 (27-144)||(41822-41939)
[»] scaffold0177 (1 HSPs)
scaffold0177 (239-410)||(25494-25654)
[»] scaffold0285 (1 HSPs)
scaffold0285 (253-397)||(13257-13400)
[»] scaffold0240 (1 HSPs)
scaffold0240 (284-406)||(10598-10720)
[»] scaffold0406 (1 HSPs)
scaffold0406 (239-328)||(13932-14017)


Alignment Details
Target: chr4 (Bit Score: 133; Significance: 6e-69; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 238 - 410
Target Start/End: Complemental strand, 5834996 - 5834824
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  5834996 cacaagtatccgtgcgtatcgggacgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagcatcg 5834897  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
    || ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||    
T  5834896 ggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggagcttcacagctt 5834824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 5835217 - 5835080
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||  |    
T  5835217 gaagcactatatccaaagtggaaggggaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttctgtggtatgat 5835118  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    || ||||||||||||||||||||||||||||| |||||    
T  5835117 gtaggtcgtactggcaccaaagaaagataaaggaaatg 5835080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 28377132 - 28376993
Alignment:
Q  268 ggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagggga 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | ||||| |||| ||    
T  28377132 ggaaaattattttcttaaaaaataaaatttaatatttggatactctcccggtacgtatcgaaaagtatcgggtaggtatcggtgcaggatacacaggaga 28377033  T
Q  368 tacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  28377032 tacgatacgtcatccattttgaagtatcggggcttcacag 28376993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 238 - 407
Target Start/End: Original strand, 42472521 - 42472690
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  42472521 cacaagtatccgtgcgtatcgggatgtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtattgggaagtatcg 42472620  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || | ||||||||| | ||||||||||| ||||  |||| |||||||||||||||||||||  |||||||    
T  42472621 ggcaagtatcggtgcaggatacgcagggaatacagtacgtcatccattttgaagtatcgggacttcacag 42472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 8064088 - 8064227
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  8064088 atcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 8064187  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||| |||| |||||||||||||||||||||| ||||    
T  8064188 ggatacggtacgtcatccattttgaagtatcggggcttca 8064227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 399
Target Start/End: Complemental strand, 19738836 - 19738702
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  19738836 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 19738737  T
Q  365 ggatacgatacgacatccattttgaagtatcgggg 399  Q
    ||||||| |||| ||||||||||||||||||||||    
T  19738736 ggatacggtacgtcatccattttgaagtatcgggg 19738702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 238 - 407
Target Start/End: Original strand, 52122811 - 52122990
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    ||||||||||||||||||||| |||| ||||||||          |||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  52122811 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 52122910  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | |||||||||| ||||||||||| | ||||||||||||||||  |||| |||||||||||||||||||||| |||||||    
T  52122911 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcacag 52122990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 5325700 - 5325839
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  5325700 atcggataattattttttttaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 5325799  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    |||||| ||||| |||||||||| ||||||||||| ||||    
T  5325800 ggatacaatacgtcatccattttaaagtatcggggcttca 5325839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 8063841 - 8063965
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  8063841 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 8063940  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    |||||||||||||||||||| ||||    
T  8063941 ggcaccaaagaaagataaaggaaat 8063965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 41145779 - 41145609
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttctta-aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    ||||| |||| ||||||||||| | | |||||| ||| ||||| ||  |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  41145779 cacaattatctgtgcgtatcggaaagtatcggataataatttttttttaaaaataaaatttaatatttggatactctccgaatacgtatcggaaagtatc 41145680  T
Q  337 gggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||  |||||||| || | ||||||||||||||||  |||| |||||||||||||||||||||| |||||||    
T  41145679 ggacaggtatcgatgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcacag 41145609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 53322476 - 53322335
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |  |||||| ||| | ||||||||      
T  53322476 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgagccggtatcagtgcaggatacgcaaa 53322377  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  53322376 ggatacgatacgtcatccattttgaagtatcggggcttcaca 53322335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 38492221 - 38492377
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||          ||||||    
T  38492221 cacaagtatccgtgcgtatcgggatgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatac----------gtatcg 38492310  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    || ||||||||||| | ||||||||||||||||  |||| |||||||||||||||||||||| ||||    
T  38492311 ggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttca 38492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 252 - 394
Target Start/End: Complemental strand, 52721416 - 52721274
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||| | | |||||| ||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||| ||||||| || || ||||||||    
T  52721416 cgtatcggaaagtatcggataattattttataaaaaaataaaatttaatatttggatactctccgaatacgtatcgggaagtatcaggcagatatcggtg 52721317  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtat 394  Q
     | |||||||||||||||||||||| |||| ||||||||||||    
T  52721316 caggatacgcaggggatacgatacgtcatctattttgaagtat 52721274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 3403318 - 3403443
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || |||||| | ||||||||||||||    
T  3403318 ccaaagtggacggcaaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 3403417  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    | |||||||||||||||||| |||||    
T  3403418 gacaccaaagaaagataaaggaaatg 3403443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 14795381 - 14795256
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||| |||| ||||| |||||| | |||||| |||||| | ||||||||||||||    
T  14795381 ccaaagtggacgatgaccactttggaagaaaaagttgaaaccctaatttcttaataagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 14795282  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
     ||||||||||||||||||| |||||    
T  14795281 agcaccaaagaaagataaaggaaatg 14795256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 28377284 - 28377174
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaatt-ttttaaaaaggggaagatgaagttggttctgtggtatag 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||| || |||||||| |    
T  28377284 gaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaatcctaatttttttagaaaggggaagatgaaattgtttatgtggtatgg 28377185  T
Q  113 tgtgggtcgta 123  Q
    ||||| |||||    
T  28377184 tgtggatcgta 28377174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 272 - 410
Target Start/End: Original strand, 55901125 - 55901263
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| || |||||||||||||||| || ||||| | ||| |||||||||||  |||||||||||| ||||||||| | ||||| |||||||||||    
T  55901125 aattattttttttaaaaataaaatttaatcttcggatattttcctgatacgtatcgagaagtatcgggtatgtatcggtgcaggatacacaggggatacg 55901224  T
Q  372 atacgacatccattttgaagtatcggggtttcacagctt 410  Q
    ||||| |||| ||||| |||||||||||||||| |||||    
T  55901225 atacgtcatctattttaaagtatcggggtttcatagctt 55901263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 5325457 - 5325582
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||| |||  ||||| |||||| | |||||| |||||| | ||||||||||||||    
T  5325457 ccaaagtggacgatgaccactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 5325556  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    || ||||||||||||||||| |||||    
T  5325557 ggtaccaaagaaagataaaggaaatg 5325582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 252 - 404
Target Start/End: Original strand, 36511899 - 36512052
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaa-aataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||| ||| | |||||| ||||||||| |||||| ||||||||||||| || ||||||||| | ||||||||||||||||||||||| | |||||||     
T  36511899 cgtatcaggaagtatcggataattatttttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaagtatcggc 36511998  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    | | |||||||| ||||||| ||||| || ||||||||||||||||||| ||||    
T  36511999 gcaggatacgcacgggatacaatacgtcaaccattttgaagtatcggggcttca 36512052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 52572564 - 52572451
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || ||||     ||||||||||||||    
T  52572564 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtg-----gtgtgggtcgtact 52572470  T
Q  126 ggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||    
T  52572469 ggcaccaaagaaagataaa 52572451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 404
Target Start/End: Complemental strand, 40694222 - 40694070
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | ||| || ||||||||| | ||||||||||||||||| ||  |||||||||| |||||||||||| |||||||    |||||||||||    
T  40694222 cgtatcgggaagtatcagataattattttataaaaaaataaaatttaatcttcagatactctcctgatacgtatcgggaagtatcaatcaggtatcggtg 40694123  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
     |  ||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  40694122 cagaatacgcatgggatacgatacatcatccattttgaagtatcggggcttca 40694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 253 - 404
Target Start/End: Complemental strand, 2586487 - 2586336
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | || ||| ||||||||| | |||||| ||| |||||| || ||||||||| | ||||||||| ||||||||||||| |||| ||||||     
T  2586487 gtatcgggaagtataggataattattttttaaaaaaacaaattttaatcttcggatactcttctgatacgtattggaaagtatcgggcaggtgtcggtga 2586388  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    | ||||| ||||||||||| |||| |||||||||| ||||||||||| ||||    
T  2586387 aggatactcaggggatacggtacgtcatccattttaaagtatcggggcttca 2586336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 31226712 - 31226594
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||| | | |||||| |||||| | |||||| |||||| |  |||||| ||||||    
T  31226712 ccaaagtggacggcgaccactttgaaagaaaaagttgaaaacctaatttctcagaaagggaaagatgcaattggttgtgtggtgtgatgtgggccgtact 31226613  T
Q  126 ggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||    
T  31226612 ggcaccaaagaaagataaa 31226594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 265 - 406
Target Start/End: Original strand, 37992511 - 37992653
Alignment:
Q  265 atcggaaaattattttcttaaaa-aataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcag 363  Q
    |||||| ||||||||| |||||| ||||||||||||| |||||||||||| | |||||||||||||||||||| |  | ||||||||| ||||| ||||     
T  37992511 atcggataattatttttttaaaaaaataaaatttaatctttggatactcttctgatacgtatcggaaagtatcagacatgtatcggtgcaagatccgcaa 37992610  T
Q  364 gggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||| ||||| | |||||||||||||| ||| | ||||||    
T  37992611 gggatacaatacgtcttccattttgaagtaccggagcttcaca 37992653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 397
Target Start/End: Complemental strand, 17892380 - 17892255
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| ||  ||||||||||||||| || ||||||||| | ||||| |||||| |||||||||| ||||||||||||| |||||||| | ||||||    
T  17892380 aattatttttttttaaaataaaatttaatcttcggatactcttctgatacatatcgggaagtatcgggcaggtatcggtgtatgatacgcatgagatacg 17892281  T
Q  372 atacgacatccattttgaagtatcgg 397  Q
     |||| | ||||||||||||||||||    
T  17892280 gtacgtcgtccattttgaagtatcgg 17892255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 398
Target Start/End: Original strand, 46431912 - 46432045
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| ||  ||||||||||||||| |||||||||||||  |||||||||||| ||||||| |  |||||||| || | |||| ||||     
T  46431912 atcggataattatttttttttaaaataaaatttaatctttggatactctcttgatacgtatcgggaagtatcagtcaggtatcgttgcaggatatgcaga 46432011  T
Q  365 ggatacgatacgacatccattttgaagtatcggg 398  Q
    |||||||||||| ||||| |||||||||||||||    
T  46432012 ggatacgatacgtcatccgttttgaagtatcggg 46432045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 41145987 - 41145873
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| | | |||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || |||||| | ||||||||||||||    
T  41145987 ccaaagtggacgacaaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 41145888  T
Q  126 ggcaccaaagaaaga 140  Q
    | ||| |||||||||    
T  41145887 gacactaaagaaaga 41145873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 14795168 - 14795078
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    |||||||||||||| ||||||||| | |||||| ||||||||| | ||| || ||||||||||||||||||||||||| ||||||||||||    
T  14795168 cacaagtatccgtgtgtatcgggatgtatcggataattattttttaaaagaaaaaaatttaatatttggatactctccggatacgtatcgg 14795078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 53322714 - 53322596
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| || ||| | ||| || ||||   | |||||| |||||||    
T  53322714 ccaaactggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaaaatgcaattgtttgtgtgtcgtggtgtggttcgtact 53322615  T
Q  126 ggcaccaaagaaagataaa 144  Q
     ||||||||||||||||||    
T  53322614 tgcaccaaagaaagataaa 53322596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 1177080 - 1176981
Alignment:
Q  305 ggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||||| | ||||| ||||||||||||||||| |||||| |||| | |||||| ||||||||||||||| || | ||||||||||||||||| ||||    
T  1177080 ggatactcttctgatacatatcggaaagtatcgggcaggtatgggtgcaggatacgtaggggatacgatacgtcaactattttgaagtatcggggcttca 1176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 395
Target Start/End: Complemental strand, 4400607 - 4400477
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || |||||||||||||||||||  |||||||||| |||||||||||| ||||||| |  | ||||||||  | ||||| ||||    
T  4400607 atcggataattattttttttaaaaataaaatttaatattctgatactctcctgatacgtatcgggaagtatcagacaagtatcggttcatgatacacagg 4400508  T
Q  365 ggatacgatacgacatccattttgaagtatc 395  Q
     ||||||||    ||| ||||||||||||||    
T  4400507 agatacgatttatcattcattttgaagtatc 4400477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 14795084 - 14795018
Alignment:
Q  343 gtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    ||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  14795084 gtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 14795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 39957716 - 39957630
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    |||||||| | | |||||| ||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||  |||||||||    
T  39957716 cgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatattcggatactctccggatacgtatcgagaagtatcgg 39957630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 405
Target Start/End: Original strand, 3403564 - 3403694
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| ||  |||||||||||||||||||||||||||||| |||||          |||||||| || |||| ||| | ||||| ||||    
T  3403564 atcggataattatttttttttaaaataaaatttaatatttggatactctccggatac----------gtatcgggaagatatcagtgcaggatacacagg 3403653  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcac 405  Q
    ||||||| |||| ||||||||||||||||| |||| |||||    
T  3403654 ggatacggtacgtcatccattttgaagtattggggcttcac 3403694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 407
Target Start/End: Complemental strand, 47607226 - 47607107
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| ||  ||| |||||| |||||||||| | || |||| || || ||||| || | |||||||||| ||||||||| | |||||||||    
T  47607226 aaataaaatttaatcttcagatgctctcctgatacgtatcaggaaatatcaggcagatatcg-tgcaggatacgcaggagatacgatatgtcatccattt 47607128  T
Q  387 tgaagtatcggggtttcacag 407  Q
    ||||||||||||| |||||||    
T  47607127 tgaagtatcggggcttcacag 47607107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 51858931 - 51858837
Alignment:
Q  305 ggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaag-atacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
    ||||||||||| |||||||||||| ||||||| |  |||||||| || ||| ||||||||| ||||||||||| |||||||||| |||||||||||    
T  51858931 ggatactctcctgatacgtatcgggaagtatcagacaggtatcg-tgcaaggatacgcaggagatacgatacgtcatccattttaaagtatcgggg 51858837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 27981993 - 27981905
Alignment:
Q  307 atactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    ||||||||  ||||||||||| |||||||| |  || |||||||| | ||| |||||| ||||||||||| ||||||||||||||||||    
T  27981993 atactctcttgatacgtatcgaaaagtatcagacagatatcggtggaggatgcgcaggagatacgatacgtcatccattttgaagtatc 27981905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 31946192 - 31946268
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    |||||||||| | |||||| ||||||||| || |||||||||||||||| || ||||||||| | ||||||||||||    
T  31946192 cgtatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgg 31946268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 19739003 - 19738948
Alignment:
Q  96 ttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  19739003 ttggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaagaaaatg 19738948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 24793717 - 24793780
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtat 335  Q
    ||||||||| ||||||||||||||||||| || ||||||||| | ||||||||||| |||||||    
T  24793717 aattatttttttaaaaaataaaatttaatcttcggatactcttctgatacgtatcgaaaagtat 24793780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 31226119 - 31226044
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactct 313  Q
    ||||||||||| |||||||||| |   | |||| ||||||||| | ||||||||||||||||||||||||||||||    
T  31226119 cacaagtatccatgcgtatcggaaaatagcggataattattttttgaaaaaataaaatttaatatttggatactct 31226044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 42472375 - 42472446
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | ||||||||||||| ||||| ||||||||||||||||||||    
T  42472375 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcactaaagaaagataaagaaaatg 42472446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 10257774 - 10257697
Alignment:
Q  330 aagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||||||| |||||||| |  |  |||||||| |||||||||||  |||||||||||||||||||||| |||||||    
T  10257774 aagtatcgggcaggtatcgatacagaatacgcagcggatacgatacatcatccattttgaagtatcggggcttcacag 10257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 21058944 - 21058843
Alignment:
Q  293 aatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagt 392  Q
    |||||||| |||||||||||||| |||||||||||| || |||| |  | ||||||||| | ||||| ||| ||||||| |||| ||| |||||| ||||    
T  21058944 aatttaatctttggatactctccagatacgtatcgggaaatatcagacatgtatcggtgcaggatacacagtggatacgctacgtcattcattttaaagt 21058845  T
Q  393 at 394  Q
    ||    
T  21058844 at 21058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 44121886 - 44121950
Alignment:
Q  330 aagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtat 394  Q
    |||||||||| ||||||||||| | |||||||||  ||||||||||| | |||||||||||||||    
T  44121886 aagtatcgggcaggtatcggtgcaggatacgcagaagatacgatacgtcgtccattttgaagtat 44121950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 7429255 - 7429192
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcgg 349  Q
    |||||| ||||||||  ||||||||||| ||||||||||||||  |||||| ||||||||||||    
T  7429255 aaaatagaatttaatcattggatactcttccgatacgtatcggggagtatcaggtaggtatcgg 7429192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 21637785 - 21637734
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtat 335  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||||    
T  21637785 aaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtat 21637734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 52572340 - 52572278
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcc 315  Q
    |||||||| | | |||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  52572340 cgtatcggaaagtatcggataattatttttttaaaaa-taaaatttaatatttggatactctcc 52572278  T

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Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 31946262 - 31946315
Alignment:
Q  343 gtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
    ||||||||| | ||||||||||| |||||||||| |||||||||| ||||||||    
T  31946262 gtatcggtgcaggatacgcagggaatacgatacgtcatccattttaaagtatcg 31946315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 42630485 - 42630537
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||| ||||||    
T  42630485 aaaataaaatttaatcttcggatattctcctgatacgtatcggaaaatatcgg 42630537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 4119502 - 4119545
Alignment:
Q  283 taaaaaataaaatttaatatttggatactctcccgatacgtatc 326  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  4119502 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 4119545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 405
Target Start/End: Complemental strand, 24296580 - 24296497
Alignment:
Q  322 gtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcac 405  Q
    |||||| |||||||| |  | ||||||||||| |||||||||  |||||| |||| |||||||||| || |||||| |||||||    
T  24296580 gtatcgaaaagtatcagacaagtatcggtgtatgatacgcagatgatacggtacgtcatccattttaaactatcggagtttcac 24296497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 406
Target Start/End: Complemental strand, 51674939 - 51674856
Alignment:
Q  323 tatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||||||||||||  | ||||| ||| |  ||| ||||| ||||||||||| |||| ||||||||||||||| | ||||||    
T  51674939 tatcggaaagtatcggacaagtatcagtgcagaatatgcaggagatacgatacgtcatctattttgaagtatcggcgcttcaca 51674856  T

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Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 43509763 - 43509813
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaa 64  Q
    |||||| |||||||||||||||||||||||| | || |||||||| |||||    
T  43509763 gaagcattatatccaaagtggaaggcgaccattctgaaagaaaaaattgaa 43509813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 52122682 - 52122730
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  52122682 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatg 52122730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 6e-69; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 238 - 406
Target Start/End: Complemental strand, 35389916 - 35389748
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35389916 cacaagtatccgtgcgtatcgggatgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcg 35389817  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    || ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  35389816 ggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 35389748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 28882410 - 28882540
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  28882410 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttttgtggtatagt 28882509  T
Q  114 gtgggtcgtactggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||||||||||||||    
T  28882510 gtgggtcgtactggcaccaaagaaagataaa 28882540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 238 - 410
Target Start/End: Complemental strand, 7327878 - 7327706
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||| ||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  7327878 cacaagtatccgtgcgtatcgggatgtatcggataattattttttaaaaaaataaaatttaatatttggatactatccggatacgtatcgggaagtatcg 7327779  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
    || ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  7327778 ggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 7327706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 238 - 397
Target Start/End: Original strand, 28882630 - 28882789
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28882630 cacaagtatctgtgcgtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 28882729  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
    || |  |||||||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  28882730 ggcatatatcggtgcatgatacgcaggggatacggtacgtcatccattttgaagtatcgg 28882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 22311117 - 22310980
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||    
T  22311117 gaagcactatatccaaagtggaaggcgaccattttgaaagaaaaagttgaaaccctaattttttaacaaggggaagatgaaattgtttctgtggtatggt 22311018  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||||||||||||||| |||||    
T  22311017 gtgggtcgtactggcaccaaagaaagataaaggaaatg 22310980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 238 - 407
Target Start/End: Original strand, 1679650 - 1679819
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  1679650 cacaagtatccgtgcgtatcgggatgtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcg 1679749  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || ||||||||||| | |||| |||| ||||||| ||||  ||||||||||||||||||||| |||||||    
T  1679750 ggcaggtatcggtgcaggatatgcagtggatacggtacgttatccattttgaagtatcggggcttcacag 1679819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 409
Target Start/End: Complemental strand, 52121346 - 52121175
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||| ||||| | | | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  52121346 cacaagtatccgtgtgtatcagaaagtatcgaaaaattatttttttaaaaaataaaatttaatatttggatactctcccgatacgtatcgagaagtatcg 52121247  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    |  ||||||  ||| | |||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  52121246 gacaggtattagtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacagct 52121175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 35390137 - 35390000
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||    
T  35390137 gaagcactatatccaaagtggaaggcgaccattttagaaaaaaaagttgaaaccctaattttttaaaatggggaagatgaaattgtttctgtggtatggt 35390038  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||| ||||||| ||||||||||||||||||| |||||    
T  35390037 gtggatcgtactcgcaccaaagaaagataaaggaaatg 35390000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 40497469 - 40497327
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||| | ||||||||||    
T  40497469 atcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgcagg 40497370  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  40497369 ggatacggtacgtcatccattttgaagtatcggggcttcacag 40497327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 22310844 - 22310703
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||| || ||||||||||| | ||||| ||||    
T  22310844 atcggaaaattattttcttaaaaaataaaatttaatattttgatactctatcgatacgtatcgggaagtatcaggcaggtatcggtgcaggatacacagg 22310745  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||| |||| |||||||| ||||||||||||| ||||||    
T  22310744 ggatacggtacgtcatccattgtgaagtatcggggcttcaca 22310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 50287081 - 50287213
Alignment:
Q  18 cactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgg 117  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| ||| || |||||||| ||||||    
T  50287081 cactatatccaaagtggcaggcgaccattttggaagaaaaagttgaaactctaattttttaaaaagggaaagatgaaattgtttttgtggtatggtgtgg 50287180  T
Q  118 gtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||| ||||||||||||||||||| |||||    
T  50287181 gtcgtact-gcaccaaagaaagataaaggaaatg 50287213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 33240116 - 33239992
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  33240116 cacaagtatccgtgcgtattgggacgtatcggtaaattattttcttaaaaaataaaatataatatttggatactctcccgatacgtatcgggaagtatcg 33240017  T
Q  338 ggtaggtatcggtgtaagatacgca 362  Q
    || |||||||| || | ||||||||    
T  33240016 ggcaggtatcgatgcaggatacgca 33239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 265 - 409
Target Start/End: Original strand, 37996790 - 37996934
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| || ||||||| |||| |||||| | ||||||||||    
T  37996790 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaaatatcgggcaggtctcggtgcaggatacgcagg 37996889  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    ||||||| |||| |||||||||| ||||||||||| |||||||||    
T  37996890 ggatacggtacgtcatccattttaaagtatcggggcttcacagct 37996934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 250 - 408
Target Start/End: Original strand, 55268980 - 55269134
Alignment:
Q  250 tgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcgg 349  Q
    |||||||||||| | |||||| ||||||||| | ||||||||||||||||| || ||||||||||| |||||||||||| |||||||    ||||||||     
T  55268980 tgcgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatc----aggtatcga 55269075  T
Q  350 tgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    || | |||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  55269076 tgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacagc 55269134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 254 - 404
Target Start/End: Original strand, 6134350 - 6134500
Alignment:
Q  254 tatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgta 353  Q
    |||||||| | |||||| ||||||||| ||||||||||| ||||||| || ||||||||||| ||||| |||||| ||||||| |||| ||||||||| |    
T  6134350 tatcgggaagtatcggataattatttttttaaaaaataatatttaatcttcggatactctcctgatacatatcgggaagtatcaggtatgtatcggtgca 6134449  T
Q  354 agatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
     |||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  6134450 ggatacgcaggggatacgatacgtcatccattttgaagtatcagggcttca 6134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 52121547 - 52121414
Alignment:
Q  16 agcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgt 115  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||| ||  |||    
T  52121547 agcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttctatgg-atgatgt 52121449  T
Q  116 gggtcgtactggcaccaaagaaagataaagaaaat 150  Q
     ||||||||| | ||||||||||||||||| ||||    
T  52121448 tggtcgtactagaaccaaagaaagataaaggaaat 52121414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 265 - 398
Target Start/End: Original strand, 25937043 - 25937176
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||| ||| || |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |||| |||||| ||||||||||    
T  25937043 atcggataattaatttttttaaaaataaaatttaatatttagatactctccagatacgtatcggaaagtatcgggcatgtattggtgtaggatacgcagg 25937142  T
Q  365 ggatacgatacgacatccattttgaagtatcggg 398  Q
     ||||||||||| |||||||||| ||||||||||    
T  25937143 agatacgatacgtcatccattttaaagtatcggg 25937176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 48122964 - 48122825
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||  |||||||||||| || ||||||| | ||||||||| | |||| |||||    
T  48122964 atcggataattattttttaaaaaaataaaatttaatatttggatactctctggatacgtatcgggaaatatcgggcatgtatcggtgcaggatatgcagg 48122865  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||| |||| |||||||||||||||||||||| ||||    
T  48122864 ggatacggtacgtcatccattttgaagtatcggggcttca 48122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 10224895 - 10225013
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  10224895 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtttggtgtgggtcgtact 10224994  T
Q  126 ggcaccaaagaaagataaa 144  Q
    ||||||||| |||||||||    
T  10224995 ggcaccaaataaagataaa 10225013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 28704866 - 28704724
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||| |||||||| ||| | |||| |||||    
T  28704866 atcggataattattttttaaaaaaataaaatttaatattttgatactctccggatacatattggaaagtatcggataggtatcagtgcaggatatgcagg 28704767  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||| ||||||||||| |||||||    
T  28704766 ggatacggtacgtcatccattttaaagtatcggggcttcacag 28704724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 48123199 - 48123073
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||||| ||||||||||||||    
T  48123199 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtatggtgtgggtcgtact 48123100  T
Q  126 -ggcaccaaagaaagataaagaaaatg 151  Q
      ||||||||||||||||||| |||||    
T  48123099 aagcaccaaagaaagataaaggaaatg 48123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 28705111 - 28704986
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| || |||||| | |||||| |||| | | ||||||||||||||    
T  28705111 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaaaggaaagatgcaattggttgtgtgatgtggtgtgggtcgtact 28705012  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  28705011 ggcaccaaagaaagataaaggaaatg 28704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 265 - 406
Target Start/End: Original strand, 42464886 - 42465027
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||| ||||||| |||||||||||||||||| | |||||||||||| |||||||||| ||||||||||| | |||||||||     
T  42464886 atcggataattattttttaaaacaataaaaattaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaga 42464985  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||  |||| |||||||||||||||||||||| ||||||    
T  42464986 ggatacagtacgtcatccattttgaagtatcggggcttcaca 42465027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 52505567 - 52505692
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| |||  ||||| |||||| | |||||| |||||| | ||||||||||||||    
T  52505567 ccaaagtggacggtgaccactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 52505666  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  52505667 ggcaccaaagaaagataaaggaaatg 52505692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 13748445 - 13748565
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    ||||||||||||||||| || ||||||||| | ||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||| || |||    
T  13748445 aaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgatacgtcaacca 13748544  T
Q  384 ttttgaagtatcggggtttca 404  Q
    |||||||||||||||| ||||    
T  13748545 ttttgaagtatcggggcttca 13748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 265 - 397
Target Start/End: Complemental strand, 52684340 - 52684208
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || ||||||||||||||||||| |||||||||||  |||||||||||||||||||||  ||||||||||| | |||||||| |    
T  52684340 atcggataattattttttttaaaaataaaatttaatattcggatactctcctaatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcatg 52684241  T
Q  365 ggatacgatacgacatccattttgaagtatcgg 397  Q
     ||||||||||| |||| |||||||||||||||    
T  52684240 agatacgatacgtcatctattttgaagtatcgg 52684208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 42464677 - 42464795
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||| |||||  | |||||| |||||| | ||||||||||||||    
T  42464677 ccaaagtggacggcgaccacttaggaagaaaaagttgaaaccctaatttcttagaaagggaaagatccaattggttgtgtggtgtggtgtgggtcgtact 42464776  T
Q  126 ggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||    
T  42464777 ggcaccaaagaaagataaa 42464795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 238 - 348
Target Start/End: Original strand, 45532932 - 45533042
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||||||||||||| |||| |||||| ||||||||| || ||||||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  45532932 cacaagtatccgtgcgtatcgagacgtatcggataattattttttttaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcg 45533031  T
Q  338 ggtaggtatcg 348  Q
    || ||||||||    
T  45533032 ggcaggtatcg 45533042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 1679442 - 1679567
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||| ||| |||||| |||||| | ||||||  ||||| | ||||||||||||||    
T  1679442 ccaaagtggacggcgatcactttggaagaaaaagttggaaccctaatttcttagaaagggaaagatgcaattggttgggtggtgtggtgtgggtcgtact 1679541  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  1679542 ggcaccaaagaaagataaaggaaatg 1679567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 28968662 - 28968515
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||| || |||||||||||||||| || ||||||||| | |||||||||||| |||||||||| |||||||||||    
T  28968662 cgtatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcgggcaggtatcggtg 28968563  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
     | |||||| |  ||||| | |||| ||||||||||||||||||||||    
T  28968562 caggatacgtaaaggatatggtacgtcatccattttgaagtatcgggg 28968515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 41742038 - 41742193
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | | |||| ||||||||| || |||||||||||||||| || ||||||||||| |||| ||||||| ||||||| || |||||||||||    
T  41742038 cgtatcgggaagtaccggataattattttttttaaaaataaaatttaatcttcggatactctccagatatgtatcgggaagtatcaggaaggtatcggtg 41742137  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     | ||||| ||| |||||| ||||| |||||||||||||||||||| | |||||||    
T  41742138 caggatacacagaggatacaatacgtcatccattttgaagtatcggcgcttcacag 41742193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 265 - 409
Target Start/End: Original strand, 10225141 - 10225274
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||           ||||||||| | ||||||||||    
T  10225141 atcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggaaa-----------gtatcggtgcaggatacgcagg 10225229  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    |||||||||||| |||||||||| ||||||| ||| |||||||||    
T  10225230 ggatacgatacgtcatccattttaaagtatcagggcttcacagct 10225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 22611350 - 22611495
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||| | | |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||          |||||||| |||||||||||    
T  22611350 cgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatac----------gtatcgggcaggtatcggtg 22611439  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     | || |||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  22611440 caggaaacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 22611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 282 - 394
Target Start/End: Complemental strand, 30226542 - 30226430
Alignment:
Q  282 ttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatc 381  Q
    ||||||||||||||||||| || ||||||||||  |||||||||| |||||||||||| ||||||||||| | ||||||||| |||||||||| | ||||    
T  30226542 ttaaaaaataaaatttaatcttcggatactctcttgatacgtatcagaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgataagtcatc 30226443  T
Q  382 cattttgaagtat 394  Q
    |||||||||||||    
T  30226442 cattttgaagtat 30226430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 265 - 408
Target Start/End: Original strand, 52505812 - 52505954
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||| | |||||||||||| || |||||||  |||||||||| | |||||||| |    
T  52505812 atcggataattatttttttgaaaaataaaatttaatatttggatactcttcggatacgtatcgggaaatatcgggccggtatcggtgcaggatacgca-g 52505910  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    ||||||  |||  |||||||||| ||||||||||| ||||||||    
T  52505911 ggatacagtacatcatccatttttaagtatcggggcttcacagc 52505954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 42229813 - 42229684
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || |||||||||||||||| || ||||||||| | |||||||||| | |||||||||| ||||||||||| | ||||||||||    
T  42229813 atcggataattattttttttaaaaataaaatttaattttcggatactcttctgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagg 42229714  T
Q  365 ggatacgatacgacatccattttgaagtat 394  Q
    |||||  ||||| |||| ||||||||||||    
T  42229713 ggatataatacgtcatctattttgaagtat 42229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 273 - 396
Target Start/End: Original strand, 22289708 - 22289831
Alignment:
Q  273 attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacga 372  Q
    |||||||| | || |||||||||||||| || ||||||||||| |||||||||| | |||||||  | |||||| |||| | ||||||||||||||||||    
T  22289708 attattttttaaagaaataaaatttaatcttcggatactctcctgatacgtatcaggaagtatcatgcaggtattggtgcaggatacgcaggggatacga 22289807  T
Q  373 tacgacatccattttgaagtatcg 396  Q
    |||| |||||||||||||||||||    
T  22289808 tacgtcatccattttgaagtatcg 22289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 411
Target Start/End: Complemental strand, 53192627 - 53192491
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||||          ||||| ||||||||||| | ||||| ||||    
T  53192627 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgta----------tcgggcaggtatcggtgcaggatactcagg 53192538  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagcttc 411  Q
    | ||||| |||| |||||||||||||||||||||| |||| ||||||    
T  53192537 gtatacggtacgtcatccattttgaagtatcggggcttcagagcttc 53192491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 252 - 406
Target Start/End: Original strand, 21157695 - 21157849
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||| ||| | |||||| ||||||||| | ||||||||||||||||| || ||||||||||| | |||||||| |||||||||||| || ||||  ||    
T  21157695 cgtatcaggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaatg 21157794  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
     | ||| | ||| | |||||||||| |||||||||||||||||| ||| ||||||    
T  21157795 caggatgcacagagaatacgatacgtcatccattttgaagtatctgggcttcaca 21157849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 396
Target Start/End: Complemental strand, 983311 - 983202
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||| |  || |||| ||| || |||| |||||||||||||||| |||||||||    
T  983311 aaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacagatatcagtgcaaaatacacaggggatacgatacgtcatccattt 983212  T
Q  387 tgaagtatcg 396  Q
    |||| |||||    
T  983211 tgaattatcg 983202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 286 - 406
Target Start/End: Complemental strand, 2122825 - 2122702
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgc---aggggatacgatacgacatcc 382  Q
    ||||||||||||||| || |||| |||||| |||||||||||| ||||||| || | ||||||||| | |||||||   ||||||||| ||||| |||||    
T  2122825 aaaataaaatttaatcttcggattctctcctgatacgtatcgggaagtatcaggcaagtatcggtgcatgatacgcaggaggggatacaatacgtcatcc 2122726  T
Q  383 attttgaagtatcggggtttcaca 406  Q
    ||||||||||||||||| ||||||    
T  2122725 attttgaagtatcggggcttcaca 2122702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 2567377 - 2567508
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||||| ||           ||||||||| | ||||||||||    
T  2567377 atcggataattatttttttaaaaaataaaatttaatattcggatactctctggatacgtatcgggaa-----------gtatcggtgcaggatacgcagg 2567465  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
      |||||||||| ||||||||||||||||||||| ||||||||    
T  2567466 aaatacgatacgtcatccattttgaagtatcgggatttcacag 2567508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 45347450 - 45347296
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaa-taaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||| ||| | |||||| ||||||||| | |||||| ||||||||||| || ||||||||| | ||||||||||| ||||||||||| ||||||| ||    
T  45347450 cgtatcaggaagtatcggataattattttttaaaaaaaataaaatttaatcttcggatactcttcggatacgtatcgaaaagtatcgggcaggtatcagt 45347351  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | | |||| ||||||||||||||| | || ||||||||||||||||| | |||||||    
T  45347350 gcaggata-gcaggggatacgata-gtcaaccattttgaagtatcggagcttcacag 45347296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 395
Target Start/End: Original strand, 20510123 - 20510265
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | ||| || ||||||||| || |||||||||||||||| ||  |||| ||||  ||||||||| ||||||||||    ||||||||||      
T  20510123 gtatcgggaagtatcagataattattttttttaaaaataaaatttaatcttcagatattctcttgatacgtattggaaagtatcaaacaggtatcggtac 20510222  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    |||||||||| |||||||||| || ||||||||||||||||||    
T  20510223 aagatacgcacgggatacgatgcgtcatccattttgaagtatc 20510265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 265 - 397
Target Start/End: Complemental strand, 1528630 - 1528509
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||          ||||| |||||||| || | ||||||||||    
T  1528630 atcggataattatttttttaaaaa-taaaatttaatatttggatactctccggatacgta----------tcgggcaggtatcgatgcatgatacgcagg 1528542  T
Q  365 ggatacgatacgacatccattttgaagtatcgg 397  Q
    ||||| |||||| ||||||||||||||||||||    
T  1528541 ggatatgatacgtcatccattttgaagtatcgg 1528509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 29915959 - 29915867
Alignment:
Q  306 gatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    |||||| ||| |||||||||||| ||||||| |  ||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||    
T  29915959 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcggg 29915867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 29965112 - 29965020
Alignment:
Q  306 gatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    |||||| ||| |||||||||||| ||||||| |  ||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||    
T  29965112 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcggg 29965020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 30787562 - 30787683
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccatt 385  Q
    ||||||||||||||| || ||||||||||| |||||||||||  |||| ||    | ||||| ||  | |||||||||||||||||||||| |||| |||    
T  30787562 aaaataaaatttaatcttcggatactctcctgatacgtatcgagaagtgtcaaacaagtatcagtacaggatacgcaggggatacgatacgtcatcgatt 30787661  T
Q  386 ttgaagtatcggggtttcacag 407  Q
    |||||||||||||| |||||||    
T  30787662 ttgaagtatcggggcttcacag 30787683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 19421568 - 19421469
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||| ||| | ||||||||||||||||| || ||||||||||| |||||||||||| ||||||| |  |||||||||||    
T  19421568 cgtatcgggaagtatcggataattactttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcggtg 19421469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 394
Target Start/End: Original strand, 19879069 - 19879201
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||| ||||||||||||||| ||| || |||||||||||  |||| ||||||          | |||||||||||    
T  19879069 cgtatcgggaagtatcggataattatttttttaaaaaataaaattgaatcttcggatactctccttatacatatcgg----------gcaggtatcggtg 19879158  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtat 394  Q
     | ||||||||||||||||| |||| |||||||||||||||||    
T  19879159 caggatacgcaggggatacggtacgtcatccattttgaagtat 19879201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 25936818 - 25936929
Alignment:
Q  40 gaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaag 139  Q
    |||||||||| || ||||||||||||||||||||| ||| |||||| |||||| | ||| || |||||| |  ||||||||||||| ||||||||||  |    
T  25936818 gaccactttgaaataaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttatgtggtgtgatgtgggtcgtactagcaccaaagatgg 25936917  T
Q  140 ataaagaaaatg 151  Q
    |||||| |||||    
T  25936918 ataaaggaaatg 25936929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 25700913 - 25700759
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaa-aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||||| | |||||| |||||||||   || ||||||||||||||| || ||||||||||| |||||||||  | ||||||| || ||||||||||    
T  25700913 cgtatcgggaagtatcggataattattttaaaaataaaataaaatttaatcttcggatactctcctgatacgtattaggaagtatcaggcaggtatcggt 25700814  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | | ||||||||| |||||| |||   ||||||  ||||||||||| || |||||||    
T  25700813 gcaggatacgcagaggatacaatatatcatcca--ttgaagtatcgaggcttcacag 25700759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 38889101 - 38889200
Alignment:
Q  307 atactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||||| ||||||||||||||| |||| || || |||||||| | ||| || || |||||||||||| |||||||||||||||||| ||| ||||||    
T  38889101 atactctcctgatacgtatcggaaattatcaggcagatatcggtgcaggat-cgtagaggatacgatacgtcatccattttgaagtatcagggcttcaca 38889199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 19420954 - 19420904
Alignment:
Q  355 gatacgcaggggatacgatacgacatccattttgaagtatcggggtttcac 405  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  19420954 gatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcac 19420904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 53192809 - 53192738
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | ||||||||||||| |||||||||||||||||||| |||||    
T  53192809 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaaggaaatg 53192738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 3983817 - 3983715
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||||| |  | ||||||||| | ||||| | | ||||||  |||| ||||||    
T  3983817 aaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaagtatcggtgcaggatacacggaggatacagtacgtcatcca 3983718  T
Q  384 ttt 386  Q
    |||    
T  3983717 ttt 3983715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 394
Target Start/End: Complemental strand, 39664078 - 39663968
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    ||||||||||| ||||| || | ||||| | | ||||||||||||||||||||||  ||||||||||| | ||||||||| | |||  ||||  || |||    
T  39664078 aaaaaataaaaattaatcttcgaatactattctgatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcagagaatagaatacatcaacca 39663979  T
Q  384 ttttgaagtat 394  Q
    |||||||||||    
T  39663978 ttttgaagtat 39663968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 47642158 - 47642072
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    |||||||||| | ||| || ||||||||| ||| ||||||||||||||| || ||||||||| | ||||||||| || |||||||||    
T  47642158 cgtatcgggaagtatcagataattatttttttataaaataaaatttaatcttcggatactcttctgatacgtattgggaagtatcgg 47642072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 396
Target Start/End: Original strand, 7899684 - 7899829
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaa-aataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||||| | |||||| |||||||||  ||||| ||||||||||||| || ||||||||| | |||||||||||| || ||||  | || ||| |||    
T  7899684 cgtatcgggaagtatcggataattatttttgtaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaaatatcaagcagatataggt 7899783  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
    | | |||||| | | |||||  | || |||||||||||||||||||    
T  7899784 gcaggatacgtaagagatacatttcgtcatccattttgaagtatcg 7899829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 21006534 - 21006605
Alignment:
Q  335 tcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||| |||||||| || |||||||||| | |||| |||||| ||| |||||||||||||||||| ||||||    
T  21006534 tcgggcaggtatcgatgcaagatacgcatgagatatgatacgtcattcattttgaagtatcggggcttcaca 21006605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 49419298 - 49419245
Alignment:
Q  341 aggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtat 394  Q
    |||||||| || | |||||||| ||||||||||||| |||||||||||||||||    
T  49419298 aggtatcgatgcaggatacgcaagggatacgatacgtcatccattttgaagtat 49419245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 13353232 - 13353296
Alignment:
Q  332 gtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
    |||||||| || |||||| | | |||||||||| ||||||||||| |||||||||| ||||||||    
T  13353232 gtatcgggcagatatcggcgcaggatacgcaggagatacgatacgtcatccattttaaagtatcg 13353296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 25322438 - 25322522
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    ||||| |||| | |||||| |||||||||   | |||||||||||||||  || |||||||| ||||||||||||| ||||||||    
T  25322438 cgtattgggaagtatcggataattattttaaaataaaataaaatttaatggtttgatactcttccgatacgtatcgaaaagtatc 25322522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 351
Target Start/End: Complemental strand, 15769066 - 15768980
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||| |||| |||| |||||||||  |||||||| || |||||||||   ||||||||||| ||||||||| | | |||||||||    
T  15769066 atcggataattgtttttttaaaaaatttaatttaattttcggatactcttgtgatacgtatcgaaaagtatcgcgcatgtatcggtg 15768980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 19349636 - 19349701
Alignment:
Q  332 gtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
    |||||||| ||||||| ||| | | ||| |||| ||||||||||| || |||||||||||||||||    
T  19349636 gtatcgggcaggtatcagtgcaggttacacaggagatacgatacgtcaaccattttgaagtatcgg 19349701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 396
Target Start/End: Complemental strand, 47642066 - 47642025
Alignment:
Q  355 gatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
    |||||||| |||||||| |||| |||||||||||||||||||    
T  47642066 gatacgcatgggatacggtacgtcatccattttgaagtatcg 47642025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 5271589 - 5271545
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||    
T  5271589 aaaaaataaaatttaatctccggatactctcctgatacgtatcgg 5271545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 7899669 - 7899701
Alignment:
Q  306 gatactctcccgatacgtatcggaaagtatcgg 338  Q
    ||||||||||||||||||||||| |||||||||    
T  7899669 gatactctcccgatacgtatcgggaagtatcgg 7899701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 45532821 - 45532853
Alignment:
Q  119 tcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||||||||||||||||| |||||    
T  45532821 tcgtactggcaccaaagaaagataaaggaaatg 45532853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 4e-67; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 32877603 - 32877434
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||| ||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32877603 cacaagtatccgtgcgtatcaggatgtatcggaaaattatttttttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcg 32877504  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  32877503 ggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacag 32877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 239 - 407
Target Start/End: Complemental strand, 36483600 - 36483432
Alignment:
Q  239 acaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    |||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  36483600 acaagtattcgtgcgtatcgggacgtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcggaaagtatcgg 36483501  T
Q  339 gtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  36483500 gcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 36483432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 6028626 - 6028484
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| | ||||||||||    
T  6028626 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcggaaagtatcgggcagatatcggtgcaggatacgcagg 6028527  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  6028526 ggatacggtacgtcatccattttgaagtatcggggcttcacag 6028484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 238 - 406
Target Start/End: Original strand, 2872863 - 2873030
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||||||||||||| |||| |||||| ||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  2872863 cacaagtatccgtgcgtatcgagacgtatcggataatcatttt-ttaaaaaataaaatttcatatttggatactctccggatacgtatcgggaagtatcg 2872961  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    || ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  2872962 ggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 2873030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 4246106 - 4245937
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  4246106 cacaagtatccgtgcgtatcgggatgtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcg 4246007  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || ||||||||||| | |||| |||||||||||| |||| |||| ||||||||| ||||||| |||||||    
T  4246006 ggcaggtatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagcatcggggcttcacag 4245937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 239 - 408
Target Start/End: Original strand, 45217173 - 45217342
Alignment:
Q  239 acaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    ||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  45217173 acaagtatccgtgcgtatcgggatgtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggaaaatatcgg 45217272  T
Q  339 gtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
      ||||||||||| | |||||||||||||||| |||   |||||||||| ||||||||||| ||||||||    
T  45217273 acaggtatcggtgcaggatacgcaggggatacaatatatcatccattttaaagtatcggggcttcacagc 45217342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 265 - 408
Target Start/End: Original strand, 22201316 - 22201459
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  22201316 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 22201415  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    |||||||||||| |||||||||||||||||||||  ||||||||    
T  22201416 ggatacgatacgtcatccattttgaagtatcgggacttcacagc 22201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 6028877 - 6028740
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||    
T  6028877 gaagcactatatccaaagtggaaggcgaccatcttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttctatggtatggt 6028778  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||| ||||||| |||||||||| |||||    
T  6028777 gtgggtcgtactgacaccaaataaagataaaggaaatg 6028740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 19947706 - 19947843
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||    
T  19947706 gaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaatatgaaattgtttctgtggtatggt 19947805  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||| || |||||||||| ||||||| |||||    
T  19947806 gtgggtcgtattgacaccaaagaatgataaaggaaatg 19947843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 34901361 - 34901503
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  34901361 atcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 34901460  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  34901461 ggatacggtacgtcatccattttgaagtatcggggcttcacag 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 25022264 - 25022123
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| | ||||||||||    
T  25022264 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagg 25022165  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
     |||||| || | ||||||||||||||||| |||| ||||||    
T  25022164 agatacggtatgtcatccattttgaagtattggggcttcaca 25022123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 239 - 407
Target Start/End: Complemental strand, 32759548 - 32759370
Alignment:
Q  239 acaagtatccgtgcgtatcgggacgcatcggaa----------aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    ||||||||||||||||||||||||| |||||||          ||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  32759548 acaagtatccgtgcgtatcgggacgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccagatacgtatcgg 32759449  T
Q  329 aaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     |||||||||| ||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||| || |||||||    
T  32759448 gaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgaggcttcacag 32759370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 16384756 - 16384614
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||| | ||||| ||||    
T  16384756 atcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatactcagg 16384657  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  16384656 ggatacggtacgtcatccattttgaagtatcggggcttcacag 16384614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 19436639 - 19436502
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||    
T  19436639 gaagcactatatctaaagtggaaggcgaccattttgaaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttctatggtatggt 19436540  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||| |||  ||||||||||||||||||| |||||    
T  19436539 gtgggtcatacctgcaccaaagaaagataaaggaaatg 19436502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 19572788 - 19572651
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||    
T  19572788 gaagcactatatctaaagtggaaggcgaccattttgaaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttctatggtatggt 19572689  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||| |||  ||||||||||||||||||| |||||    
T  19572688 gtgggtcatacctgcaccaaagaaagataaaggaaatg 19572651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 43771683 - 43771825
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||| | |||||||||  | ||||||||| | ||||||||||    
T  43771683 atcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgcagg 43771782  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  43771783 ggatacggtacgtcatccattttgaagtatcggggtttcacag 43771825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 240 - 409
Target Start/End: Complemental strand, 37668746 - 37668577
Alignment:
Q  240 caagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcggg 339  Q
    |||||||| ||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||| | |||  ||| ||||||| ||||||| |     
T  37668746 caagtatctgtgcgtatcgggacgtatcggataattattttttaaaaaaataaaatttaatatttggatattatccgtatatgtatcgggaagtatcaga 37668647  T
Q  340 taggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
     || ||| |||| ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  37668646 cagatattggtgcaagatacgcagggaatacggtacgtcatccattttgaagtatcggggtttcacagct 37668577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 265 - 395
Target Start/End: Original strand, 19947976 - 19948105
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||| | ||||||||||| | ||||||||||    
T  19947976 atcggaaaattattttcttaaaaaataaagtt-aatatttggatactctcccggtacgtatcgggaagtatcgagcaggtatcggtgcaggatacgcagg 19948074  T
Q  365 ggatacgatacgacatccattttgaagtatc 395  Q
    ||||| |||||| ||||||||||||||||||    
T  19948075 ggatatgatacgtcatccattttgaagtatc 19948105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 34901115 - 34901239
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  34901115 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 34901214  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    |||||||||||||||||||| ||||    
T  34901215 ggcaccaaagaaagataaaggaaat 34901239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 238 - 410
Target Start/End: Complemental strand, 13422384 - 13422202
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    |||||||||||||||||||||||| | ||||||||          |||||||| | | ||||||||||||||||||||||||||||||  ||||||||||    
T  13422384 cacaagtatccgtgcgtatcgggatgtatcggaaagtattggataattattttttaacaaaataaaatttaatatttggatactctccgtatacgtatcg 13422285  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
    | ||||||| || ||||||||||| | |||| |||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  13422284 ggaagtatcaggcaggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 13422202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 28876544 - 28876687
Alignment:
Q  265 atcggaaaattattttctt-aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcag 363  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||||||  |||||||||||  |||||||||| ||||||||||| | |||||||||    
T  28876544 atcggataattattttttttaaaaaataaaatttaatatttggatactctctggatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcag 28876643  T
Q  364 gggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||||  |||| |||||||||||||||||||||| |||||||    
T  28876644 gggatacagtacgtcatccattttgaagtatcggggcttcacag 28876687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 42949456 - 42949326
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||| ||||| |||||||||| ||| || |||||||| ||    
T  42949456 gaagcactatatccaaagtggaagacgaccattttgaaagaaaaagttgaaaccttaatttttttaaaagaggaagatgaaattgtttatgtggtatggt 42949357  T
Q  114 gtgggtcgtactggcaccaaagaaagataaa 144  Q
    |||| ||||||||||||| ||||||||||||    
T  42949356 gtggatcgtactggcacccaagaaagataaa 42949326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 4246301 - 4246176
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  4246301 ccaaagtggacggcgaccactttggaagaaaaagttggaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 4246202  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  4246201 ggcaccaaagaaagataaaggaaatg 4246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 25022537 - 25022417
Alignment:
Q  18 cactatatccaaagtggaaggcgaccactttggaag----aaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||| |||||||     ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| ||    
T  25022537 cactatatccaaagtggaaggcgaccattttggaaagaaaaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggt 25022438  T
Q  114 gtgggtcgtactggcaccaaa 134  Q
    |||||||||||||||||||||    
T  25022437 gtgggtcgtactggcaccaaa 25022417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 45216966 - 45217091
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| |||  ||||| |||||| | |||||| |||||| | ||||||||||||||    
T  45216966 ccaaagtggacggtgaccactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 45217065  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  45217066 ggcaccaaagaaagataaaggaaatg 45217091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 32877842 - 32877710
Alignment:
Q  14 gaagcactatatccaaagt----ggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggta 109  Q
    |||||||||||||||||||     ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||       
T  32877842 gaagcactatatccaaagttgaaagaaggtgaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttctgtg--- 32877746  T
Q  110 tagtgtgggtcgtactggcaccaaagaaagataaagaa 147  Q
      ||||||||||||||||||||||||||||||||||||    
T  32877745 --gtgtgggtcgtactggcaccaaagaaagataaagaa 32877710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 408 - 513
Target Start/End: Original strand, 27508197 - 27508304
Alignment:
Q  408 cttcattccaatatcgcatcggtaaattacatttgacattacatctacatcttcaa-ttttttccgtcaattaccggtatcttcaagcctttcctt-gaa 505  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||||||| |||    
T  27508197 cttcattccaatatcgcatcggtaaactacatttgacattacatctacatcttcaattttttttcgtcaattacagggatcttcaagcctttccttggaa 27508296  T
Q  506 gcacatat 513  Q
    ||||||||    
T  27508297 gcacatat 27508304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 43771438 - 43771563
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  43771438 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 43771537  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    | ||||||||| |||||||| |||||    
T  43771538 gacaccaaagatagataaaggaaatg 43771563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 238 - 410
Target Start/End: Original strand, 12580495 - 12580677
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    |||||||||||||||||||||||| | ||||||||          ||||| || | |||||||||||||||||||||||||||||||| |||||||||||    
T  12580495 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcagataattatattttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 12580594  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
    | ||||||| |  || |||||||| | |||||||||| |||||| |||  |||| ||||||||||||||||| ||||||||||    
T  12580595 ggaagtatcagacagttatcggtgcaggatacgcaggagatacggtacatcatctattttgaagtatcggggcttcacagctt 12580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 28876311 - 28876429
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | |||||||||||| |    
T  28876311 ccaaagtggacggccaccactttgaaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtatt 28876410  T
Q  126 ggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||    
T  28876411 ggcaccaaagaaagataaa 28876429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 5539794 - 5539669
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| || |||||||||||||||||||||||||||  |||||| ||  |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  5539794 ccaaagtggacggtgaccactttggaagaaaaagttgaaactttaatttcttggaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 5539695  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  5539694 ggcaccaaagaaagataaaggaaatg 5539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 36483804 - 36483684
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || ||||     ||||||||||||||    
T  36483804 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtg-----gtgtgggtcgtact 36483710  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  36483709 ggcaccaaagaaagataaaggaaatg 36483684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 32638681 - 32638793
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||| | ||| || |||||| | ||||||||||||||    
T  32638681 ccaaagtggacggcgaccactttggaagaaaatgttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 32638780  T
Q  126 ggcaccaaagaaa 138  Q
    |||||||||||||    
T  32638781 ggcaccaaagaaa 32638793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 254 - 397
Target Start/End: Complemental strand, 32425071 - 32424928
Alignment:
Q  254 tatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgta 353  Q
    |||||||| | |||||| ||||||||| || |||||||||||||||| || ||||||||| | |||||||||||  ||||||| |  ||||||||||| |    
T  32425071 tatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgtgaagtatcagacaggtatcggtgca 32424972  T
Q  354 agatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
     |||||||| |||||||| |||| ||||||||||||||||||||    
T  32424971 ggatacgcaagggatacggtacgtcatccattttgaagtatcgg 32424928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 238 - 395
Target Start/End: Original strand, 32638818 - 32638965
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||  ||||||||||| | | ||| || ||||||||| |||||||||||||||||||||||||||||||||| |||||          ||||||    
T  32638818 cacaagtatttgtgcgtatcggaaagtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatac----------gtatcg 32638907  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    || ||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||    
T  32638908 ggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 408
Target Start/End: Complemental strand, 37372376 - 37372255
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| || ||||||||||| |||||||||||| ||||||| |  ||||||| ||| | |||||||||| ||||||||||| |||||||||    
T  37372376 aaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcagtgcaggatacgcaggagatacgatacgtcatccattt 37372277  T
Q  387 tgaagtatcggggtttcacagc 408  Q
    ||||||||||| | ||||||||    
T  37372276 tgaagtatcggagcttcacagc 37372255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 429 - 513
Target Start/End: Complemental strand, 10716155 - 10716071
Alignment:
Q  429 gtaaattacatttgacattacatctacatcttcaattttttccgtcaattaccggtatcttcaagcctttccttgaagcacatat 513  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||||    
T  10716155 gtaaactacatttgacattacatctacatcttcaatttttttcgtcaattaccggtatcttcaagcctttcttagaggcacatat 10716071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 284 - 407
Target Start/End: Complemental strand, 38388787 - 38388664
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    ||||||||||||||||| || ||||||| ||| || ||||||||  |||||||||  ||||||||||| | ||||||||| |||||| ||||  ||||||    
T  38388787 aaaaaataaaatttaatcttcggatactttcctgacacgtatcgagaagtatcggacaggtatcggtgcaggatacgcagaggatacaatacagcatcca 38388688  T
Q  384 ttttgaagtatcggggtttcacag 407  Q
    ||||||||||||||||||||||||    
T  38388687 ttttgaagtatcggggtttcacag 38388664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 42949264 - 42949198
Alignment:
Q  270 aaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42949264 aaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgaaaagtatc 42949198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 5818297 - 5818424
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| || |||||||||||||||| ||  |||||||||| ||||| |||||| || ||||  | ||||||||||| | |||||||| | ||||||    
T  5818297 aattattttttttaaaaataaaatttaatcttcagatactctcctgatacatatcgggaaatatcatgcaggtatcggtgcaggatacgcaagtgatacg 5818396  T
Q  372 atacgacatccattttgaagtatcgggg 399  Q
    ||||| ||||||||||||||||||||||    
T  5818397 atacgtcatccattttgaagtatcgggg 5818424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 275 - 398
Target Start/End: Complemental strand, 27886319 - 27886196
Alignment:
Q  275 tattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgata 374  Q
    |||||| || ||||||||| |||||| || ||||||||||| |||||||||||| |||||||    ||||||||||| | |||| |||||| |||| |||    
T  27886319 tattttttttaaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaata 27886220  T
Q  375 cgacatccattttgaagtatcggg 398  Q
    || |||||||||||||||||||||    
T  27886219 cgtcatccattttgaagtatcggg 27886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 275 - 398
Target Start/End: Complemental strand, 27944977 - 27944854
Alignment:
Q  275 tattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgata 374  Q
    |||||| || ||||||||| |||||| || ||||||||||| |||||||||||| |||||||    ||||||||||| | |||| |||||| |||| |||    
T  27944977 tattttttttaaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaata 27944878  T
Q  375 cgacatccattttgaagtatcggg 398  Q
    || |||||||||||||||||||||    
T  27944877 cgtcatccattttgaagtatcggg 27944854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 37668949 - 37668830
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||| | |||||| | ||| || ||||     ||||||||||||||    
T  37668949 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaaattcttataaagagaaagatgcaattgtttgtgtg-----gtgtgggtcgtact 37668855  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||| ||||||||| |||||    
T  37668854 ggcaccaaag-aagataaaggaaatg 37668830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 407
Target Start/End: Complemental strand, 29355750 - 29355620
Alignment:
Q  277 ttttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacg 376  Q
    |||| ||||||| ||||||||||| || ||||||||||| | |||||||||| |||||||  | || ||||| || | ||||| ||||||||| |||| |    
T  29355750 tttttttaaaaattaaaatttaatcttcggatactctcctgctacgtatcgggaagtatcaagcagctatcgatgcaggatacccaggggatatgatatg 29355651  T
Q  377 acatccattttgaagtatcggggtttcacag 407  Q
     |||||||||||||||||| ||| |||||||    
T  29355650 tcatccattttgaagtatcagggcttcacag 29355620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 398
Target Start/End: Complemental strand, 27968237 - 27968109
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatac--tctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggata 369  Q
    ||||||||| |||||||||||| |||||| || ||||||  ||||| |||||||||||| ||||||| |  ||||||||||| | |||| |||||| |||    
T  27968237 aattatttttttaaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaata 27968138  T
Q  370 cgatacgacatccattttgaagtatcggg 398  Q
    | ||||| |||| ||||| ||||||||||    
T  27968137 caatacgtcatctatttttaagtatcggg 27968109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 398
Target Start/End: Complemental strand, 28025223 - 28025095
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatac--tctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggata 369  Q
    ||||||||| |||||||||||| |||||| || ||||||  ||||| |||||||||||| ||||||| |  ||||||||||| | |||| |||||| |||    
T  28025223 aattatttttttaaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaata 28025124  T
Q  370 cgatacgacatccattttgaagtatcggg 398  Q
    | ||||| |||| ||||| ||||||||||    
T  28025123 caatacgtcatctatttttaagtatcggg 28025095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 406
Target Start/End: Complemental strand, 3892075 - 3891960
Alignment:
Q  291 aaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaa 390  Q
    |||||||||| || | |||||||| |||||||||| |||||||||| |  | ||||||||| | |||||| ||| ||||  ||||| |||||||||||||    
T  3892075 aaaatttaatcttcgaatactctctcgatacgtattggaaagtatcagacaagtatcggtgcatgatacgtaggagatataatacgtcatccattttgaa 3891976  T
Q  391 gtatcggggtttcaca 406  Q
    | ||||||||||||||    
T  3891975 gaatcggggtttcaca 3891960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 12580272 - 12580386
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||  |||||| | ||| || ||||     |||||| |||||||    
T  12580272 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaaggaaaagatgcaattgtttgtgtg-----gtgtggatcgtact 12580366  T
Q  126 ggcaccaaagaaagataaag 145  Q
    ||| ||||||| ||||||||    
T  12580367 ggctccaaagagagataaag 12580386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 19436399 - 19436272
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    ||||| ||||||||||||||||||||||||||||||||||| |              ||||||| |||||||||  ||||||||||| | |||||||| |    
T  19436399 atcgggaaattattttcttaaaaaataaaatttaatatttgaa--------------gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaag 19436314  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||| |||| |||||||||||||||||||| | ||||||    
T  19436313 ggatacggtacgtcatccattttgaagtatcggagcttcaca 19436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 19572548 - 19572421
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    ||||| ||||||||||||||||||||||||||||||||||| |              ||||||| |||||||||  ||||||||||| | |||||||| |    
T  19572548 atcgggaaattattttcttaaaaaataaaatttaatatttgaa--------------gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaag 19572463  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||| |||| |||||||||||||||||||| | ||||||    
T  19572462 ggatacggtacgtcatccattttgaagtatcggagcttcaca 19572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 17702627 - 17702549
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||||  |||||||||||||||||| ||  ||||||||||||||||||||||   ||||||||| ||||||||||    
T  17702627 aattatttttataaaaaataaaatttaattttcagatactctcccgatacgtatcgaggagtatcgggaaggtatcggt 17702549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 40412507 - 40412433
Alignment:
Q  332 gtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    |||||||| ||||| ||||| | |||||||||||||||||||||  ||||||||||||||||| |||| ||||||    
T  40412507 gtatcgggcaggtaacggtgcaggatacgcaggggatacgatacatcatccattttgaagtattggggcttcaca 40412433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 7411712 - 7411643
Alignment:
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
    |||||||||||| |||||||| || | ||||| ||| |||||||||||| ||||||||||||||||||||    
T  7411712 gaaagtatcgggcaggtatcgatgcaggatacacagtggatacgatacgccatccattttgaagtatcgg 7411643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 398
Target Start/End: Complemental strand, 20182525 - 20182380
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||  ||||||||| ||||||| ||||||||||| ||  |||||||| | ||||||||||| |||||||| |  || |||  |||    
T  20182525 cgtatcgggaagtatcggttaattatttttttaaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatcagacagatat-agtg 20182427  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
     | |||| ||| |||||||  |||| ||||||| |||||||||||||    
T  20182426 caggatatgcacgggataccgtacgtcatccatcttgaagtatcggg 20182380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 30804750 - 30804846
Alignment:
Q  291 aaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccatttt 387  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||| | |  ||| | || ||||||||||||  |||| ||||| |||| |||||    
T  30804750 aaaaattaatattcggatactctcctgatacgtatcggaaagtatcgagcaaatattgatgcaagatacgcaggatatacaatacgtcatctatttt 30804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 32768 - 32686
Alignment:
Q  317 gatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
    |||||||||| |||||||||||| || ||||| || | ||||| ||| ||||| |||||| || ||||||| |||||||||||    
T  32768 gatacgtatcagaaagtatcgggcagatatcgatgcaggatacacagaggatatgatacgtcaaccattttaaagtatcgggg 32686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 5539541 - 5539500
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  5539541 aaataaaatttaatatttggatactctccggatacatatcgg 5539500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 40412553 - 40412508
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatac 310  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  40412553 atcggataattatttttttaaaaaataaaatttaatattcggatac 40412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 12357998 - 12357954
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    |||||||||||||||||||||||||||| | | ||||||||||||    
T  12357998 aaaaaataaaatttaatatttggatactatgctgatacgtatcgg 12357954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 12359126 - 12359082
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    |||||||||||||||||||||||||||| | | ||||||||||||    
T  12359126 aaaaaataaaatttaatatttggatactatgctgatacgtatcgg 12359082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 24100179 - 24100243
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    ||||||||| | ||||| ||||||||||| || ||||||||||| ||||| ||||||||| ||||    
T  24100179 aattattttttaaaaaattaaaatttaatcttcggatactctcctgatacatatcggaaaatatc 24100243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 16384932 - 16384877
Alignment:
Q  96 ttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| |||||||||||||||||||| |||||    
T  16384932 ttggttgtgtggtgtggtgtggatcgtacgggcaccaaagaaagataaaggaaatg 16384877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 28737299 - 28737255
Alignment:
Q  360 gcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||||||| ||||| ||||||||||||| |||||||| ||||    
T  28737299 gcaggggatacaatacgtcatccattttgaaatatcggggcttca 28737255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 1043023 - 1043189
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1043023 cacaagtatccgtgcgtattgagacgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatca 1043122  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    || |||||||| || | |||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  1043123 ggcaggtatcgatgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttca 1043189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 19510899 - 19510762
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||    
T  19510899 gaagcactatatccaaagtggaaggcaaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttctgtggtatggt 19510800  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||||||||||||||| |||||    
T  19510799 gtgggtcgtactggcaccaaagaaagataaaggaaatg 19510762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 262 - 406
Target Start/End: Complemental strand, 19510662 - 19510518
Alignment:
Q  262 cgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||||||||| | ||||| ||| | ||||| |    
T  19510662 cgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactcacccgatacatatcaggaagtatcgggcatgtatcagtgcatgatacac 19510563  T
Q  362 aggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  19510562 aggggatacgatacgtcatccattttgaagtatcggggtttcaca 19510518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 265 - 409
Target Start/End: Complemental strand, 40095786 - 40095642
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  40095786 atcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 40095687  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||    
T  40095686 ggatacggtacgtcatccattttgaagtatcggggcttcacagct 40095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 8029083 - 8028953
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| |||| ||    
T  8029083 gaagtactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttctgtcgtatggt 8028984  T
Q  114 gtgggtcgtactggcaccaaagaaagataaa 144  Q
    ||||||||||||| |||||||||||||||||    
T  8028983 gtgggtcgtactgacaccaaagaaagataaa 8028953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 25969547 - 25969391
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaa-taaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||| | | |||||| ||||||||| | |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  25969547 cgtatcggaaagtatcggataattattttataaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggt 25969448  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | | |||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  25969447 gcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacag 25969391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 265 - 409
Target Start/End: Complemental strand, 27354057 - 27353913
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  27354057 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 27353958  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    | ||||| |||| |||||||||||||||||||||| |||||||||    
T  27353957 gaatacggtacgtcatccattttgaagtatcggggcttcacagct 27353913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 269 - 407
Target Start/End: Original strand, 26773695 - 26773833
Alignment:
Q  269 gaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggat 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||| | |||||||| |||||    
T  26773695 gaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgagaagtatcgggcagatatcggtgcaggatacgcaagggat 26773794  T
Q  369 acgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||||| |||| ||||| ||||||||||| |||||||    
T  26773795 acgatacgtcatcaattttaaagtatcggggcttcacag 26773833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 34238294 - 34238152
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| |  |||||||||    
T  34238294 atcggataattattttttttaaaaataaaatttaatatttggatactctccgaatacgtatcggaaagtatcgggcaggtatcggtgcagaatacgcagg 34238195  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  34238194 ggatacggtacgtcatccattttgaagtatcggggcttcacag 34238152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 48163544 - 48163402
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  48163544 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 48163445  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| || ||||||||||||||||||| |||||||    
T  48163444 ggatacggtacgtcacccattttgaagtatcggggcttcacag 48163402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 16564085 - 16564221
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||| ||    
T  16564085 gaagcactatatccaaagtggaaggcgaccattttgaaagaaaaagttgaaaccctaatttttt-aaaaggggaagatgaaattgtttttgtggtatggt 16564183  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||| ||| |||||||||||||||||||||||| |||||    
T  16564184 gtgagtcttactggcaccaaagaaagataaaggaaatg 16564221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 16601577 - 16601441
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||| ||    
T  16601577 gaagcactatatccaaagtggaaggcgaccattttgaaagaaaaagttgaaaccctaatttttt-aaaaggggaagatgaaattgtttttgtggtatggt 16601479  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||| ||| |||||||||||||||||||||||| |||||    
T  16601478 gtgagtcttactggcaccaaagaaagataaaggaaatg 16601441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 395
Target Start/End: Original strand, 34122569 - 34122726
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||| |||||||||||| | || ||| |||||||||   |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  34122569 cacaagtatccatgcgtatcgggatgtattggataattatttttaaaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcg 34122668  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    || ||||||||||| | ||||||||| ||||||| |||| ||||||||||||||||||    
T  34122669 ggcaggtatcggtgcaggatacgcagaggatacggtacgtcatccattttgaagtatc 34122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 4291945 - 4291804
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccac----tttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggta 109  Q
    ||||||||| |||||||||||||||||||||     ||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||| |||||    
T  4291945 gaagcactacatccaaagtggaaggcgaccatgcattttggaagaaaaagttgaaaccctagtattttaaaaaggggaagatgaaattgtttctatggta 4291846  T
Q  110 tagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    | |||||||||||||||||||||||||||||||||| |||||    
T  4291845 tggtgtgggtcgtactggcaccaaagaaagataaaggaaatg 4291804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 238 - 410
Target Start/End: Original strand, 27397999 - 27398171
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||||||||||| | |||| |||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  27397999 cacaagtatccgtgcgtattgagacgtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacatattggaaagtatcg 27398098  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
     | ||||||| ||| | ||||||||||||||||  |||| |||||||||| ||||||| ||| |||| |||||    
T  27398099 agcaggtatcagtgcaggatacgcaggggatacagtacgtcatccattttaaagtatccgggcttcatagctt 27398171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 38263172 - 38262993
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    ||||||||||||||||||||| |||| ||||||||          |||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  38263172 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 38263073  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||||||||| |||||||| || | ||||||||| | ||||| |||| |||||||||||||||||||||| |||||||    
T  38263072 gaaagtatcgggcaggtatcgatgcaggatacgcagagaatacggtacgtcatccattttgaagtatcggggcttcacag 38262993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 238 - 406
Target Start/End: Complemental strand, 11829862 - 11829684
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    |||||||||||||||||||||||||| ||||||||          |||||||| || ||||||||||||||||||||||||||||||| ||||||||| |    
T  11829862 cacaagtatccgtgcgtatcgggacgtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtattg 11829763  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    | ||||||| || || |||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  11829762 ggaagtatcaggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 11829684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 16850922 - 16850780
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||| | ||||| ||||    
T  16850922 atcggataattatttttttaaaaaataaaatttaatatttggatactcttcagatacgtatcggaaagtatcgggcaagtatcggtgcatgatacacagg 16850823  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | ||||| |||| ||||||||||||| |||||||| |||||||    
T  16850822 gaatacggtacgtcatccattttgaaatatcggggcttcacag 16850780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 9250420 - 9250529
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | |||||||||||||||||||||| ||||||    
T  9250420 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatcca 9250519  T
Q  384 ttttgaagta 393  Q
    ||||||||||    
T  9250520 ttttgaagta 9250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 40096031 - 40095907
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  40096031 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 40095932  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    |||||||||||||||||||| ||||    
T  40095931 ggcaccaaagaaagataaaggaaat 40095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 406
Target Start/End: Complemental strand, 4291664 - 4291507
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||           ||||||||||| ||||||||    
T  4291664 cacaagtatccatgcgtatcgggacgtatcggaaaattattttcttaaaaaataaaatttaatatttgg-----------atacgtatcgggaagtatcg 4291576  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    |  ||||||||||| | ||||||||||||||||| |||  |||||||||| ||||||||||| ||||||    
T  4291575 gacaggtatcggtgcaggatacgcaggggatacggtacatcatccattttaaagtatcggggcttcaca 4291507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 1042912 - 1043021
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || |||||||| ||    
T  1042912 gaagcactatatccaaagtggaaggcgatcattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttatgtggtatggt 1043011  T
Q  114 gtgggtcgta 123  Q
    ||||||||||    
T  1043012 gtgggtcgta 1043021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 26773449 - 26773565
Alignment:
Q  34 gaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaa 133  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  26773449 gaaggcgaccattttggaagaaaaagttgaaaccctaattttt-agaaaggggaagatgaaattgtttctgtggtgtggtgtgggtcgtactggcaccaa 26773547  T
Q  134 agaaagataaagaaaatg 151  Q
    |||||||||||| |||||    
T  26773548 agaaagataaaggaaatg 26773565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 39520952 - 39520793
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||| |||||||||   |||||||||||||||||||||||||||||||| |||||||||||| ||          
T  39520952 cacaagtatccgtgcgtatcgggatgtatcggataattatttttaaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaa------ 39520859  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
         ||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  39520858 -----gtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 39520793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 39521144 - 39521026
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  39521144 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 39521045  T
Q  126 ggcaccaaagaaagataaa 144  Q
     ||||||||||||||||||    
T  39521044 agcaccaaagaaagataaa 39521026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 406
Target Start/End: Complemental strand, 42897154 - 42896997
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||| | | |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||          
T  42897154 cacaagtatccgtgcgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaa------ 42897061  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
         ||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  42897060 -----gtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 42896997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 265 - 406
Target Start/End: Original strand, 27555348 - 27555489
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||| |  ||||||||     
T  27555348 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcaga 27555447  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    | ||||| |||| |||||||||||||||||| ||| ||||||    
T  27555448 gaatacggtacgtcatccattttgaagtatcagggcttcaca 27555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 265 - 396
Target Start/End: Original strand, 26845875 - 26846006
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||||||  ||||||||||| |||||| ||| ||||||||||| | |||||||| |    
T  26845875 atcggataattattttttttaaaaataaaatttaatatttggatactctccaaatacgtatcgggaagtattgggcaggtatcggtgcaggatacgcatg 26845974  T
Q  365 ggatacgatacgacatccattttgaagtatcg 396  Q
     |||||| |||  |||||||||||||||||||    
T  26845975 agatacggtacatcatccattttgaagtatcg 26846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 36660838 - 36660717
Alignment:
Q  28 aaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactgg 127  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||  | |||||| | ||||||||| ||||||    
T  36660838 aaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattg--tttgtggtgtggtgtgggtcatactgg 36660741  T
Q  128 caccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||| |||||    
T  36660740 caccaaagaaagataaaggaaatg 36660717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 238 - 399
Target Start/End: Original strand, 36202740 - 36202891
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||| ||||||||||| | | ||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||          ||||||    
T  36202740 cacaagtatctgtgcgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatac----------gtatcg 36202829  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
    || ||| ||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||    
T  36202830 ggcaggcatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggg 36202891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 253 - 406
Target Start/End: Original strand, 44960102 - 44960255
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | ||| || |||||||||   ||||||||||||||||| |||||||||||| | ||||| |||||| ||||||| |  |||| || |||     
T  44960102 gtatcgggaagtatccgataattatttttacaaaaaataaaatttaatctttggatactcttctgatacatatcgggaagtatcagacaggtgtcagtgc 44960201  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    | |||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  44960202 aggatacgcaggggatacgatacgtcatccattttgaagtatcggagcttcaca 44960255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 8028833 - 8028738
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacg 360  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||| | ||||||    
T  8028833 atcggaaaattatttttttaaaatataaaatttaatatttggatactctcccgatacgtatcaggaagtatcgggccggtatcggtgcaggatacg 8028738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 11830069 - 11829955
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || ||||     |||||| |||||||    
T  11830069 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtg-----gtgtggatcgtact 11829975  T
Q  126 ggcaccaaagaaagataaag 145  Q
    ||||||||||||||||||||    
T  11829974 ggcaccaaagaaagataaag 11829955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 272 - 406
Target Start/End: Complemental strand, 33454199 - 33454065
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| ||||||||||||||||||| || ||||||| ||| |||||||||||  ||||||| |  |  |||| ||| | |||||||||||||||||    
T  33454199 aattatttttttaaaaaataaaatttaatcttcggatactttcctgatacgtatcgagaagtatctgacatatatcagtgcaggatacgcaggggatacg 33454100  T
Q  372 atacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||| ||||||||||||| |||||||| ||||||    
T  33454099 atacgtcatccattttgaaatatcggggcttcaca 33454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 266 - 407
Target Start/End: Original strand, 47238597 - 47238728
Alignment:
Q  266 tcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggg 365  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||          | ||||||||||| || ||||||||||    
T  47238597 tcggataattattttttaaaaaaataaaatttaatatttggatactctccagatacatatcgg----------gcaggtatcggtgcaatatacgcaggg 47238686  T
Q  366 gatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||||||  |||||||||||||||||||||| |||||||    
T  47238687 gatacgatacatcatccattttgaagtatcggggcttcacag 47238728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 36660640 - 36660550
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgga 329  Q
    |||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||||    
T  36660640 cacaagtatccgtgtgtatcgggacgtatcggataattatttt-ttaaaaaataaaatttaatatttgaatactctctggatacgtatcgga 36660550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 305 - 399
Target Start/End: Original strand, 23079059 - 23079153
Alignment:
Q  305 ggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| |  | ||||||||||||||||| || | ||||||||||||||||||||||    
T  23079059 ggatactctcctgatacgtatcgggaagtatcgggtaggtatcgatccaggatacgcaggggatacggtatgtcatccattttgaagtatcgggg 23079153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 16564325 - 16564421
Alignment:
Q  241 aagtatccgtgcgtatcgggacgcatcggaaa---------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    ||||||||||||||||||||||| ||||||||         |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16564325 aagtatccgtgcgtatcgggacgtatcggaaagtatcataaattattttattaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 16564421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 16601337 - 16601241
Alignment:
Q  241 aagtatccgtgcgtatcgggacgcatcggaaa---------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    ||||||||||||||||||||||| ||||||||         |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16601337 aagtatccgtgcgtatcgggacgtatcggaaagtatcataaattattttattaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 16601241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 406
Target Start/End: Complemental strand, 38064710 - 38064590
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccatt 385  Q
    |||||| |||||||| || ||||||||||| ||||||||||||||||||||||  ||||||| ||| | |||||||| | |||||| || | ||||||||    
T  38064710 aaaatataatttaatcttcggatactctcctgatacgtatcggaaagtatcggtcaggtatcagtgcatgatacgcatgagatacgttatgtcatccatt 38064611  T
Q  386 ttgaagtatcggggtttcaca 406  Q
    || ||||||||||| ||||||    
T  38064610 ttaaagtatcggggcttcaca 38064590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 284 - 407
Target Start/End: Complemental strand, 21409508 - 21409385
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| | ||||| || ||||||| ||| | ||||  |||| ||||||||||| ||||||    
T  21409508 aaaaaataaaatttaatctttggatactctcctgatacgtatcgggatgtatcaggcaggtatcagtgcaggatatacaggagatacgatacgtcatcca 21409409  T
Q  384 ttttgaagtatcggggtttcacag 407  Q
    |||| ||||||  ||| |||||||    
T  21409408 tttttaagtatgagggcttcacag 21409385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 11058466 - 11058360
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    ||||||||||||||| |  ||||||||||| ||||||||| ||||||||| |  || |||||||| | ||||||||||||||||| |||| |||||||||    
T  11058466 aaataaaatttaataatctgatactctcccaatacgtatctgaaagtatcagacagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 11058367  T
Q  387 tgaagta 393  Q
    |||||||    
T  11058366 tgaagta 11058360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 272 - 397
Target Start/End: Complemental strand, 35159994 - 35159869
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| ||  ||||||||||||||| || ||||||||||| |||||||||||| ||||||  |  | ||||||||| |  ||| ||||||||||||    
T  35159994 aattatttttttttaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtattagacaagtatcggtgcagaatatgcaggggatacg 35159895  T
Q  372 atacgacatccattttgaagtatcgg 397  Q
    ||||  ||||||||||||||||||||    
T  35159894 atacatcatccattttgaagtatcgg 35159869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 24956387 - 24956244
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| |||||||||  |  ||||||||||||||| || ||||||||||  |||||||||||||||||||| || | |||||  || | |||| | |||    
T  24956387 atcggataattatttttctttaaaataaaatttaatcttcggatactctcttgatacgtatcggaaagtatcaggcatgtatcaatgcatgatatgtagg 24956288  T
Q  365 ggatacgatacgacatccattttgaagtatc-ggggtttcacag 407  Q
    |||||||||||| |||| ||||||||||||| |||| |||||||    
T  24956287 ggatacgatacgtcatcaattttgaagtatctggggcttcacag 24956244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 47720143 - 47720220
Alignment:
Q  257 cgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagta 334  Q
    ||||||| |||||| ||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  47720143 cgggacgtatcggataattattttttaaaaaaataaaatttaatattcggatactctccggatacgtatcgggaagta 47720220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 8056330 - 8056438
Alignment:
Q  282 ttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatc 381  Q
    ||||||||||||||||||| ||  |||||||||| |||||||||||||||||| |    ||  ||||||  ||||||||||  ||||||| |||| ||||    
T  8056330 ttaaaaaataaaatttaatcttcagatactctcctgatacgtatcggaaagtacc----agacatcggtacaagatacgcaaaggatacggtacgtcatc 8056425  T
Q  382 cattttgaagtat 394  Q
    |||||||||||||    
T  8056426 cattttgaagtat 8056438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 395
Target Start/End: Original strand, 1363010 - 1363121
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||  |||||||  | | ||||| ||| ||||||| |||||||||   | |  ||||||    
T  1363010 aaaaaataaaatttcatattcggatactctcctgatacgtatcgagaagtatcaagcatgtatcagtgcaagatacacaggggataatgttcatcatcca 1363109  T
Q  384 ttttgaagtatc 395  Q
    ||||||||||||    
T  1363110 ttttgaagtatc 1363121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 34238474 - 34238403
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | ||||||  ||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  34238474 aaagggaaagatgcaattggttgcgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaagaaaatg 34238403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 254 - 407
Target Start/End: Original strand, 554858 - 555001
Alignment:
Q  254 tatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgta 353  Q
    |||||||| | |||||| |||||||||   ||||||||||||||||| || | ||||||||| |||||||||| | |||          ||||||||| |    
T  554858 tatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcgaatactctcctgatacgtatcaggaag----------gtatcggtgca 554947  T
Q  354 agatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     ||||| |||||||||||||||| |||| |||||  |||||||||| |||||||    
T  554948 ggatacacaggggatacgatacgtcatctattttagagtatcggggcttcacag 555001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 398
Target Start/End: Complemental strand, 44269874 - 44269729
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||  ||||||||| ||||||| ||||||||||| ||  |||||||| | ||||||||||| |||||||| |  || |||  |||    
T  44269874 cgtatcgggaagtatcggttaattatttttttaaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatcagacagatat-agtg 44269776  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
     | |||| ||| |||||||  |||| ||||||| |||||||||||||    
T  44269775 caggatatgcacgggataccgtacgtcatccatcttgaagtatcggg 44269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 390
Target Start/End: Original strand, 18113918 - 18114043
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| | ||||||| || |||||||||||||||| ||  |||||||||| ||||| |||| | ||||||| || || |||||||| | |||||  ||     
T  18113918 atcggatacttattttttttaaaaataaaatttaatcttcagatactctcctgatacatatcaggaagtatcaggcagatatcggtgcaggatacataga 18114017  T
Q  365 ggatacgatacgacatccattttgaa 390  Q
    ||||| | |||| |||||||||||||    
T  18114018 ggatatggtacgtcatccattttgaa 18114043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 16564427 - 16564470
Alignment:
Q  355 gatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  16564427 gatacgcaggggatacggtacgtcatccattttgaagtatcggg 16564470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 16601235 - 16601192
Alignment:
Q  355 gatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  16601235 gatacgcaggggatacggtacgtcatccattttgaagtatcggg 16601192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 26843779 - 26843850
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | ||| || |||||| | ||||||||||||| |||||||||||||||||||| |||||    
T  26843779 aaagggaaagatgcaattgattgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaaggaaatg 26843850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 27397865 - 27397912
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaat 150  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||||    
T  27397865 tgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaat 27397912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 395
Target Start/End: Original strand, 49015068 - 49015175
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||||||||||||||  ||||||||||| | |||||||||||||     || |  ||||||||||||| ||||| || | |||||| || | ||||||    
T  49015068 aaaaaataaaatttaatcgttggatactcttctgatacgtatcgga----ttcagacaggtatcggtgtatgatacacatgagatacggtatgtcatcca 49015163  T
Q  384 ttttgaagtatc 395  Q
    ||||||||||||    
T  49015164 ttttgaagtatc 49015175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 338
Target Start/End: Original strand, 19820863 - 19820916
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    |||| ||||||||||| || ||||||||||| ||||| ||||||||||||||||    
T  19820863 aaaattaaaatttaatcttcggatactctcctgatacatatcggaaagtatcgg 19820916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 23311839 - 23311787
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    ||||||||||||||||| || ||||||||||| ||||| |||||| |||||||    
T  23311839 aaaaaataaaatttaatcttcggatactctcctgatacatatcgggaagtatc 23311787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 23970076 - 23970112
Alignment:
Q  305 ggatactctcccgatacgtatcggaaagtatcgggta 341  Q
    ||||||||||| |||||||||||||||||||||||||    
T  23970076 ggatactctcctgatacgtatcggaaagtatcgggta 23970112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 26973202 - 26973118
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    |||||||||| | |||||| ||||||||    |||||| |||||||||| || ||||||||| | ||||||||||| ||||||||    
T  26973202 cgtatcgggaagtatcggataattatttaaaaaaaaaaaaaaatttaatcttcggatactcttctgatacgtatcgaaaagtatc 26973118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 38064784 - 38064736
Alignment:
Q  282 ttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaa 330  Q
    ||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  38064784 ttaaaaaataaaatttaatcttcggatactctcttgatacgtatcggaa 38064736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 42897274 - 42897226
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | ||| ||||||||| ||||||||||||||||||||||||||    
T  42897274 tgtggtgtggtgcgggtcgtacgggcaccaaagaaagataaagaaaatg 42897226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 144
Target Start/End: Original strand, 34122430 - 34122461
Alignment:
Q  113 tgtgggtcgtactggcaccaaagaaagataaa 144  Q
    ||||||||||||||||||||||||||||||||    
T  34122430 tgtgggtcgtactggcaccaaagaaagataaa 34122461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 40041527 - 40041385
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    ||||||||||   |||||| ||||||||| || |||| ||||||||||| || ||||||||||| ||||||||||   ||||||| |  | ||||| ||     
T  40041527 cgtatcgggaaatatcggataattattttttttaaaa-taaaatttaatcttcggatactctcctgatacgtatcaagaagtatcagacatgtatcagta 40041429  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
     | |||||| ||| ||||||||||  |||| |||||||| ||||    
T  40041428 caggatacgtaggagatacgatacatcatctattttgaaatatc 40041385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 21179985 - 21179911
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatc 326  Q
    |||||||||| | |||||| ||||||| | ||  ||||||||||||||| || ||||||||||| ||||| ||||    
T  21179985 cgtatcgggaagtatcggataattattattttttaaaataaaatttaatcttcggatactctcctgatacatatc 21179911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 23970112 - 23970230
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| | | ||||||||||||||| ||  |||||||| |  ||||||||| | ||||||| |  || ||||| || | |||||||||||||||      
T  23970112 aattattttttaagaaaataaaatttaatcttcagatactcttctaatacgtatcaggaagtatcagacagatatcgatgcatgatacgcaggggatata 23970211  T
Q  372 atacgacatccattttgaa 390  Q
    ||||| |||||||| ||||    
T  23970212 atacgtcatccattatgaa 23970230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 395
Target Start/End: Complemental strand, 48153698 - 48153620
Alignment:
Q  317 gatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    ||||||||||||||| ||| | | ||||||||||| |  ||||| || |||||||||||  |||||||||| |||||||    
T  48153698 gatacgtatcggaaaatattgagcaggtatcggtgcagaatacggagaggatacgatacatcatccattttaaagtatc 48153620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 15878374 - 15878407
Alignment:
Q  305 ggatactctcccgatacgtatcggaaagtatcgg 338  Q
    ||||||||||| ||||||||||||||||||||||    
T  15878374 ggatactctcctgatacgtatcggaaagtatcgg 15878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 404
Target Start/End: Original strand, 15878401 - 15878462
Alignment:
Q  343 gtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    |||||||| || |||||| |||||||||| |||  ||||| |||||||||||||||| ||||    
T  15878401 gtatcggtataggatacgtaggggatacggtacatcatccgttttgaagtatcggggcttca 15878462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 7416729 - 7416689
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatc 326  Q
    ||||||||||||||| || ||||||||||| ||||||||||    
T  7416729 aaaataaaatttaatcttcggatactctcctgatacgtatc 7416689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 36758066 - 36758114
Alignment:
Q  356 atacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||| ||||    
T  36758066 atacgcaggggatacgatacatcattcattttgaagtattggggcttca 36758114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 36767590 - 36767638
Alignment:
Q  356 atacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||| ||||    
T  36767590 atacgcaggggatacgatacatcattcattttgaagtattggggcttca 36767638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 38265072 - 38265024
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  38265072 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatg 38265024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 238 - 409
Target Start/End: Complemental strand, 5678 - 5507
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5678 cacaagtatccgtgcgtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcg 5579  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    || ||||||||||| | ||||||||||||||||| |||| | |||||||||||||||||||| || ||||||    
T  5578 ggcaggtatcggtgcaggatacgcaggggatacggtacgtcgtccattttgaagtatcggggctttacagct 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 5918 - 5781
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||||||||||||| |||||||||||||||||||||||| ||| || |||||||| ||    
T  5918 gaagcactatatccaaagtggaaggcaaccattttgaaagaaaaagttgaaaccctcattttttaaaaaggggaagatgaaattgtttatgtggtatggt 5819  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  5818 gtgggtcatactggcaccaaagaaagataaaggaaatg 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 238 - 409
Target Start/End: Original strand, 13012944 - 13013115
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13012944 cacaagaatcagtgcgtatcgggacgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcg 13013043  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    || ||||||| ||| | ||||| |||||||||||||| | ||||||||||||||||| |||| |||||||||    
T  13013044 ggcaggtatcagtgcatgatacacaggggatacgatatgtcatccattttgaagtattggggcttcacagct 13013115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 31653146 - 31653283
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| ||    
T  31653146 gaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaacctaattttttaaaaaggggaagatgaaattgtttctgtggtatggt 31653245  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||||||||||||||| |||||    
T  31653246 gtgggtcgtactggcaccaaagaaagataaaggaaatg 31653283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 37346827 - 37346969
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  37346827 atcggaaaattattttcttaaaaaataaaatttaatatttggatactcccccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 37346926  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  37346927 ggatacggtacgtcatccattttgaagtatcggggcttcacag 37346969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 14334545 - 14334415
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||    
T  14334545 gaagcaccatatccaaagtggaaggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttctgtggtatggt 14334446  T
Q  114 gtgggtcgtactggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||||||||||||||    
T  14334445 gtgggtcgtactggcaccaaagaaagataaa 14334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 20409506 - 20409672
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||| ||||| ||||||||||||| | |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  20409506 cacacgtatctgtgcgtatcgggatgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcg 20409605  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    || ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  20409606 ggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 20409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 13012720 - 13012857
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||    
T  13012720 gaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttctgtggtatggt 13012819  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||| ||||| |||||||||||||| |||||    
T  13012820 gtgggtcgtaccggcacaaaagaaagataaaggaaatg 13012857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 265 - 409
Target Start/End: Original strand, 6916853 - 6916997
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  6916853 atcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 6916952  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||    
T  6916953 ggatacggtacgtcatccattttgaagtatcggggcttcacagct 6916997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 37346686 - 37346822
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| ||    
T  37346686 gaagcactatatccaaagtggaaggcaaccattttgaaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttgtgtggtatggt 37346785  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaat 150  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  37346786 gtgggtcatactggcaccaaagaaagataaaggaaat 37346822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 37104259 - 37104120
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| | ||||||||||    
T  37104259 atcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagg 37104160  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  37104159 ggatacgatacgtcatccattttgaagtatcggggcttca 37104120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 265 - 408
Target Start/End: Original strand, 52895692 - 52895835
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  52895692 atcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 52895791  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||    
T  52895792 ggatacggtacgtcatccattttgaagtatcggggcttcacagc 52895835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 38330566 - 38330424
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  38330566 atcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 38330467  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  38330466 ggatacggtacgtcatccattttgaagtatcggggcttcacag 38330424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 1036635 - 1036455
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    ||||||||||||||||||||| |||| ||||||||          |||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  1036635 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcg 1036536  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    |||||||||||| ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||  ||| ||||||||    
T  1036535 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatgagggcttcacagc 1036455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 43190031 - 43189894
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||    
T  43190031 gaagcactatatccaaagtggaaagcgaccattttgaaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttctgtggtatggt 43189932  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||| ||||||||| ||||||| |||||||||| |||||    
T  43189931 gtgagtcgtactgacaccaaataaagataaaggaaatg 43189894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 28949220 - 28949362
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| | ||||||||||    
T  28949220 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagg 28949319  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  28949320 ggatacggtacgtcatccattttgaagtatcggggcttcacag 28949362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 31653381 - 31653523
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| | ||||| || |    
T  31653381 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcagatatcggtgcatgatacacaag 31653480  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||||||||   ||||||||||||||||| ||| |||||||    
T  31653481 ggatacgatacattatccattttgaagtatcagggcttcacag 31653523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 43189794 - 43189652
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||| ||||||||||| | ||||||||||    
T  43189794 atcggaaaattattttcttaaaaaaaaaaatttaatatttggatactctcctgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcagg 43189695  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||  |||||||||||||||||||||  |||||||    
T  43189694 ggatacggtacatcatccattttgaagtatcgggtcttcacag 43189652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 1043403 - 1043223
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    ||||||||||||||||||||| |||| ||||||||          |||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  1043403 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 1043304  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    | |||||||||| ||||||||||| | ||||||||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  1043303 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttcacagc 1043223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 238 - 395
Target Start/End: Original strand, 28659252 - 28659409
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||| ||| |||||||| ||| |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28659252 cacaagtattcgtacgtatcggaacgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcg 28659351  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    || | ||||||||| | ||||||||||| ||||  |||| |||||||||| |||||||    
T  28659352 ggcatgtatcggtgcatgatacgcagggaataccgtacgtcatccattttaaagtatc 28659409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 3426987 - 3426845
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||  | ||||||||| | ||||||||||    
T  3426987 atcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgcagg 3426888  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||| ||||| |||||||||| ||||||||||| |||||||    
T  3426887 ggatacaatacgtcatccattttaaagtatcggggcttcacag 3426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 8132544 - 8132419
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  8132544 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 8132445  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  8132444 ggcaccaaagaaagataaaggaaatg 8132419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 6916608 - 6916732
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  6916608 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 6916707  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    |||||||||||||||||||| ||||    
T  6916708 ggcaccaaagaaagataaaggaaat 6916732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 38330811 - 38330687
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  38330811 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 38330712  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    |||||||||||||||||||| ||||    
T  38330711 ggcaccaaagaaagataaaggaaat 38330687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 52895447 - 52895571
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  52895447 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 52895546  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    |||||||||||||||||||| ||||    
T  52895547 ggcaccaaagaaagataaaggaaat 52895571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 14334326 - 14334204
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  14334326 cacaagtatccgtgcgtattgggatatatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccaatacgtatcggggagtatcg 14334227  T
Q  338 ggtaggtatcggtgtaagatacg 360  Q
    |  ||||||||||| ||||||||    
T  14334226 gacaggtatcggtgcaagatacg 14334204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 406
Target Start/End: Original strand, 48715192 - 48715345
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | ||| || ||||||||| | ||| ||||||||||||| || ||| ||||||| |||||||||||| ||||||||||  |||||||||||    
T  48715192 gtatcgggaagtatctgataattattttttaaaacaataaaatttaatcttcggacactctcctgatacgtatcgggaagtatcgggccggtatcggtgt 48715291  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    | |||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  48715292 aggatacgcaggagatacgatacaatatccattttgaagtatcggggtttcaca 48715345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 9781794 - 9781639
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| |||||||||   |||||| |||| ||||| || ||||||||| | ||||||||||||||||||||||| |||||||||||    
T  9781794 cgtatcgggaagtatcggataattattttaaaaaaaaaaaaaaattaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtg 9781695  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     | |||||||||||||||||||||| || ||||||||||||||| ||| |||||||    
T  9781694 caggatacgcaggggatacgatacgtcaaccattttgaagtatcagggcttcacag 9781639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 8132322 - 8132180
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||||||||   | ||||||||| | ||||||||||    
T  8132322 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgaacatgtatcggtgcaggatacgcagg 8132223  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||| ||||||||||||||| | |||||||    
T  8132222 ggatacggtacgtcatctattttgaagtatcggagcttcacag 8132180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 408 - 513
Target Start/End: Complemental strand, 39212702 - 39212596
Alignment:
Q  408 cttcattccaatatcgcatcggtaaattacatttgacattacatctacatcttcaattttttccgtcaattaccggtatc-ttcaagcctttccttgaag 506  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  39212702 cttcattccaatatcgcattggtaaactacaattgacattacatctacatcttcaattttttccgtcaattaccggtatctttaaagcctttctttgaag 39212603  T
Q  507 cacatat 513  Q
    |||||||    
T  39212602 cacatat 39212596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 3427234 - 3427109
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  3427234 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 3427135  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||| |||||||| |||||    
T  3427134 ggcaccaaagatagataaaggaaatg 3427109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 282 - 406
Target Start/End: Original strand, 3708274 - 3708399
Alignment:
Q  282 ttaaaaaataaaa-tttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacat 380  Q
    ||||||||||||| ||||||||| | ||||||||| ||||||||||| ||||||||||| | |||| |||||| |||| |||| |||||||||||| |||    
T  3708274 ttaaaaaataaaaatttaatattcgaatactctcctgatacgtatcgaaaagtatcgggcatgtattggtgtaggatatgcagaggatacgatacgtcat 3708373  T
Q  381 ccattttgaagtatcggggtttcaca 406  Q
    ||||||||||||||||||||||||||    
T  3708374 ccattttgaagtatcggggtttcaca 3708399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 25256987 - 25256862
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || |||||| | || |||||||||||    
T  25256987 ccaaagtggacggcgactactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtatgggtcgtact 25256888  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  25256887 ggcaccaaagaaagataaaggaaatg 25256862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 272 - 399
Target Start/End: Complemental strand, 5984359 - 5984232
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||||  | | ||||||||| |  |||||||||||||||     
T  5984359 aattatttttttaaaaaataaaatttaatatttggatactctccagatacgtattgggaagtatcaagcatgtatcggtgcagaatacgcaggggataca 5984260  T
Q  372 atacgacatccattttgaagtatcgggg 399  Q
     |||| ||||||||||||||||||||||    
T  5984259 gtacgtcatccattttgaagtatcgggg 5984232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 2364816 - 2364674
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| |||||||||   ||||||||||||||||| || ||||||||| | ||||||||||||||||||| ||| |||||||| || | ||||||||||    
T  2364816 atcggataattatttttaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtattgggcaggtatcgatgcaggatacgcagg 2364717  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||| | ||||  ||||||||||||||||| |||||||||||    
T  2364716 ggatatggtacgttatccattttgaagtatctgggtttcacag 2364674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 238 - 399
Target Start/End: Complemental strand, 30323882 - 30323720
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaa-taaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    ||||||| || ||||||||||| |   |||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  30323882 cacaagtgtctgtgcgtatcggaaaatatcggataattatttttttaaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatc 30323783  T
Q  337 gggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
    ||| || |||| ||| | ||||| ||| | ||||| | || ||||||||||||||||||||||    
T  30323782 gggcagatatcagtgcaggatacacagagaatacgttgcgtcatccattttgaagtatcgggg 30323720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 30324091 - 30323966
Alignment:
Q  25 tccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtac 124  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||| | ||| || |||||| | ||||||| |||||    
T  30324091 tccaaagtggacggcgaccactttggaagaaaa-gttgaaaccctaatttcttataaagggaaagatgcaattgtttgtgtggtgtggtgtgggccgtac 30323993  T
Q  125 tggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||||||||||| |||||    
T  30323992 tggcaccaaagaaagataaaggaaatg 30323966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 28659052 - 28659177
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || |||||| | ||||||||||||||    
T  28659052 ccaaagtggacggcacccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 28659151  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||| |||||||| |||||    
T  28659152 ggcaccaaagatagataaaggaaatg 28659177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 38948908 - 38948729
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    |||||||||||||||||||||||| | ||||||||          |||||||| | |||||||||||||||||||||||||| ||| | |||||||||||    
T  38948908 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcgtataattattttttaaaaaaataaaatttaatatttggatattcttcggatacgtatcg 38948809  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
      |||||| ||| || |||||||| | ||||||||||||||||| |||| |||||||||| ||||||||| | |||||||    
T  38948808 agaagtattgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatcggagcttcacag 38948729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 394
Target Start/End: Complemental strand, 29168099 - 29167957
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | ||| || ||||||||| | ||||||| ||||||||| || ||||||||||| |||||||| ||| |||||||  | |||||||||||    
T  29168099 cgtatcgggaagtatcagataattattttttaaaaaaattaaatttaatcttcggatactctcctgatacgtaacgggaagtatcatgcaggtatcggtg 29168000  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtat 394  Q
     | ||||||||||||||| |||||| |||||||||||||||||    
T  29167999 caggatacgcaggggatatgatacgtcatccattttgaagtat 29167957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 5984558 - 5984433
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||  |||||| | ||| || |||||| | |||||||||||||     
T  5984558 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttataaaggaaaagatgcaattgtttgtgtggtgtggtgtgggtcgtacc 5984459  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    | ||||||||||| |||||| |||||    
T  5984458 gacaccaaagaaaaataaaggaaatg 5984433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 395
Target Start/End: Complemental strand, 25256781 - 25256625
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||| |   |||  | |||||||||   |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  25256781 cacaagtatccgtgcgtatcggaaaatatcttataattattttaa-aaaaaataaaatttaatatttgaatactctccggatacgtatcgggaagtatcg 25256683  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    |  ||||||||||| |  |||||||| ||||||  |||| ||||||||||||| ||||    
T  25256682 gacaggtatcggtgcagaatacgcagaggatacagtacgtcatccattttgaaatatc 25256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 407
Target Start/End: Original strand, 34432369 - 34432504
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||| | || |||||||||||||||| || ||||||||||| |||||||||| | ||||||| || || || | ||| | ||||||||||||||||     
T  34432369 aattattatttttaaaaataaaatttaatcttcggatactctcctgatacgtatcaggaagtatcaggcagataccagtgcatgatacgcaggggataca 34432468  T
Q  372 atacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||| |||||||||||||||||||| | |||||||    
T  34432469 atacgtcatccattttgaagtatcggagcttcacag 34432504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 305 - 407
Target Start/End: Original strand, 2472873 - 2472975
Alignment:
Q  305 ggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||||||| |||||||||||||||||||| || ||||| ||||| | |||| ||||||||||||||||| |||| ||||||||||||||| | ||||    
T  2472873 ggatactctcctgatacgtatcggaaagtatcaggcaggtaccggtgcaggatatgcaggggatacgatacgtcatctattttgaagtatcggagcttca 2472972  T
Q  405 cag 407  Q
    |||    
T  2472973 cag 2472975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 265 - 395
Target Start/End: Original strand, 36367681 - 36367801
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||          |||||||| ||||||||||| | ||||||||||    
T  36367681 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatac----------gtatcgggcaggtatcggtgcaggatacgcagg 36367770  T
Q  365 ggatacgatacgacatccattttgaagtatc 395  Q
    ||||||  |||| ||||||||||||||||||    
T  36367771 ggatacagtacgtcatccattttgaagtatc 36367801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 399
Target Start/End: Original strand, 41675956 - 41676102
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | || ||| ||||||||| | ||||||||||||||||| || ||||||||| || |||| |||  | |||||||||  |||||||||||     
T  41675956 gtatcgggaagtattggataattattttttaaaaaaataaaatttaatcttcggatactcttccaatacatattaggaagtatcggacaggtatcggtgc 41676055  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
    | |||||||||| |||||| |||| |||||||||| || ||||||||    
T  41676056 atgatacgcaggagatacggtacgtcatccattttaaaatatcgggg 41676102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 396
Target Start/End: Complemental strand, 14167202 - 14167092
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccatt 385  Q
    ||||||||||||||| || ||||||||| | |||||||||| | ||||||| |  || |||||||| | |||||||||| ||||||||| | ||||||||    
T  14167202 aaaataaaatttaatcttcggatactcttctgatacgtatcaggaagtatcagacagatatcggtgcaggatacgcaggtgatacgataagtcatccatt 14167103  T
Q  386 ttgaagtatcg 396  Q
    |||||||||||    
T  14167102 ttgaagtatcg 14167092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 29861900 - 29861799
Alignment:
Q  305 ggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||||| | ||||||||||||||||||||||| |||| | |||| | |||||| ||| ||||| ||||| || ||||||||||||||||||| ||||    
T  29861900 ggatactcttctgatacgtatcggaaagtatcgggcaggtgtgggtgcatgatacgtaggagatacaatacgtcaaccattttgaagtatcggggcttca 29861801  T
Q  405 ca 406  Q
    ||    
T  29861800 ca 29861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 399
Target Start/End: Original strand, 32381038 - 32381172
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||| || ||||||||||| ||||||||| || ||||||| |  |  ||| |||| | |||| |||||    
T  32381038 atcggataattattttttaaaaaaataaaatttaatcttcggatactctcctgatacgtattgggaagtatcagacaaatattggtgcatgatatgcagg 32381137  T
Q  365 ggatacgatacgacatccattttgaagtatcgggg 399  Q
    ||||||| ||   |||||||||| |||||||||||    
T  32381138 ggatacggtatatcatccattttaaagtatcgggg 32381172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 395
Target Start/End: Complemental strand, 40776134 - 40776004
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| |||| |||| | ||||||||||||||||| || |||||||| || |||||||||||  |||||||  | || ||| |||| | ||||||||||    
T  40776134 atcggataattgttttttaaaaaaataaaatttaatcttcggatactcgcctgatacgtatcgagaagtatcatgcagatattggtgcaggatacgcagg 40776035  T
Q  365 ggatacgatacgacatccattttgaagtatc 395  Q
    ||||||  |||| | ||||||||||||||||    
T  40776034 ggatacattacgtcttccattttgaagtatc 40776004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 396
Target Start/End: Complemental strand, 10822523 - 10822410
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcgg-tgtaagatacgcaggggatacgatacgacatcc 382  Q
    ||||||||||||||||| || ||||||||||| || | ||||||| ||||||| |  || |||||| || | ||||||||||| ||| |||||| |||||    
T  10822523 aaaaaataaaatttaatcttcggatactctcctgagatgtatcgggaagtatcagacagatatcgggtgcaggatacgcagggaatatgatacgtcatcc 10822424  T
Q  383 attttgaagtatcg 396  Q
    ||||||||||||||    
T  10822423 attttgaagtatcg 10822410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 28948745 - 28948816
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  28948745 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtaccggcaccaaagaaagataaagaaaatg 28948816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 407
Target Start/End: Original strand, 34096550 - 34096673
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||| ||| |||||| ||  |||||||| | ||| |||||  |||||||||| | || |||||||| | |||||||||||||||||||||| ||  ||    
T  34096550 aaaaaaaaaagtttaatcttcagatactcttctgatgcgtattagaaagtatcgcgcagatatcggtgcaggatacgcaggggatacgatacgtcaatca 34096649  T
Q  384 ttttgaagtatcggggtttcacag 407  Q
    ||||||| |||||||| |||||||    
T  34096650 ttttgaaatatcggggcttcacag 34096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 351
Target Start/End: Complemental strand, 24851628 - 24851527
Alignment:
Q  250 tgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcgg 349  Q
    |||||||||||| | |||||| ||||||||| | ||||||||||||||||| |||||||||||||  |||| ||||  | ||||||| |  |||||||||    
T  24851628 tgcgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatctttggatactctcttgatatgtattaggaagtatcagacaggtatcgg 24851529  T
Q  350 tg 351  Q
    ||    
T  24851528 tg 24851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 9528859 - 9528943
Alignment:
Q  306 gatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaa 390  Q
    |||||| |||||||||||||||| |||||||    ||||||||||| ||||||| || ||||||| ||||| |||||||||||||    
T  9528859 gatactatcccgatacgtatcgggaagtatcaaacaggtatcggtgcaagatacacaagggatacaatacgtcatccattttgaa 9528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 20409318 - 20409389
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | ||| || |||||| | |||||||||||||||||||||||||||||||||| |||||    
T  20409318 aaagggaaagatgtaattgattgtgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaatg 20409389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 41027925 - 41028053
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| |||| |||| |||||||||||||||||||  | |||||||||||| ||||||||||||  |||| ||| | ||||||||| |  ||||| |      
T  41027925 atcggacaattgtttttttaaaaaataaaatttaattgtcggatactctcccaatacgtatcggagcgtat-gggcatgtatcggtgcagaatacgtatc 41028023  T
Q  365 ggatacgatacgacatccattttgaagtat 394  Q
     |||| |||||| |||| ||||||||||||    
T  41028024 tgatatgatacgtcatcaattttgaagtat 41028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 2222980 - 2223052
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatac 359  Q
    |||||||||||||| ||  |||||||||| ||||||||||||||| |||| |  ||||||||||||| |||||    
T  2222980 aaataaaatttaatcttcagatactctcctgatacgtatcggaaaatatcagacaggtatcggtgtaggatac 2223052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 38949026 - 38948987
Alignment:
Q  112 gtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  38949026 gtgtgggtcgtactggcaccaaagaaagataaaggaaatg 38948987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 402
Target Start/End: Complemental strand, 33039764 - 33039615
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||| ||  ||| || |||||||| || ||||||||||  ||||  ||||||  ||||| |   |||||||||||    
T  33039764 cgtatcgggaagtatcggataattatttttttttaaa-tataatttaattttcggatactctcttgatatatatcggggagtattgaacaggtatcggtg 33039666  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggttt 402  Q
     | |||||||| ||||||| ||| |  ||||||||| ||||||||||||||    
T  33039665 caggatacgcaagggatacaatatgttatccattttaaagtatcggggttt 33039615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 10763778 - 10763668
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccat 384  Q
    ||||| |||| ||||| || ||||||||| | ||||||||||  ||| ||||||| || ||| |||| | |||  ||||||||||||||||| || ||||    
T  10763778 aaaaaaaaaaattaatcttcggatactcttctgatacgtatcaaaaaatatcgggcagatattggtgcaggat--gcaggggatacgatacgtcaaccat 10763681  T
Q  385 tttgaagtatcgg 397  Q
    ||| |||||||||    
T  10763680 tttaaagtatcgg 10763668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 38218534 - 38218461
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatc 326  Q
    ||||||||| | |||| | ||||||||| | ||||||||||||||||| || ||||||||| | ||||||||||    
T  38218534 gtatcgggaagtatcgaataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatc 38218461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 38218448 - 38218404
Alignment:
Q  354 agatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||    
T  38218448 agatacgcaagggatacggtacgtcatccattttgaagtatcggg 38218404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 406
Target Start/End: Complemental strand, 24849412 - 24849362
Alignment:
Q  356 atacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    |||||||||||||||| |||| |||| ||||||||||||||| | ||||||    
T  24849412 atacgcaggggatacggtacgtcatctattttgaagtatcggagcttcaca 24849362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 1043537 - 1043489
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  1043537 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatg 1043489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 31740546 - 31740683
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || |||||| | ||    
T  31740546 gaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttatgtggtgtggt 31740645  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31740646 gtgggtcgtactggcaccaaagaaagataaagaaaatg 31740683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 238 - 406
Target Start/End: Original strand, 32130611 - 32130779
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  32130611 cacaagtatccgtgcgtatcgggacgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcctgatacgtatcgggaaatatcg 32130710  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
       ||||||| ||| | ||||||||||||||||| |||| ||| |||||| ||||||||||| ||||||    
T  32130711 aacaggtatcagtgcaggatacgcaggggatacggtacgtcattcattttaaagtatcggggcttcaca 32130779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 32130389 - 32130526
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||    
T  32130389 gaagcactatatccaaagtggaaggcgactattttggaaaaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttctgtggtatggt 32130488  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||| |||||||||||||||||||||||||||| |||||    
T  32130489 gtgtgtcgtactggcaccaaagaaagataaaggaaatg 32130526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 1036805 - 1036947
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  1036805 atcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagg 1036904  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  1036905 ggatacggtacgtcatccattttgaagtatcggggcttcacag 1036947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 238 - 410
Target Start/End: Original strand, 7188731 - 7188900
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||| | |||||||     
T  7188731 cacaagtatccgtgcgtatcgggatgtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatca 7188830  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
    || ||||||||||| | ||||||||||||||||| |   ||||||||||||||||||||||| |||| |||||    
T  7188831 ggcaggtatcggtgcaggatacgcaggggatacggt---acatccattttgaagtatcggggcttcagagctt 7188900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 31195848 - 31195977
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  31195848 atcggataattatttttttaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 31195947  T
Q  365 ggatacgatacgacatccattttgaagtat 394  Q
    |||||||||||| |||||||||||||||||    
T  31195948 ggatacgatacgtcatccattttgaagtat 31195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 256 - 408
Target Start/End: Complemental strand, 3212625 - 3212473
Alignment:
Q  256 tcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaag 355  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || |||||||| | |    
T  3212625 tcgggacgtatcggataattattttataaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcagatatcggtgcagg 3212526  T
Q  356 atacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    |||| || || |||||||||| |||||||||||||||||||||| ||||||||    
T  3212525 atacacaaggaatacgatacgtcatccattttgaagtatcggggcttcacagc 3212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 8357110 - 8356967
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||| | | |||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| |||||||||  |||||||||||    
T  8357110 cgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcggacaggtatcggtg 8357011  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
     | ||||||||||||||||| |||| ||||||||||||||||||    
T  8357010 caggatacgcaggggatacggtacgtcatccattttgaagtatc 8356967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 1036560 - 1036684
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  1036560 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 1036659  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    |||||||||||||||||||| ||||    
T  1036660 ggcaccaaagaaagataaaggaaat 1036684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 266 - 406
Target Start/End: Original strand, 25834476 - 25834616
Alignment:
Q  266 tcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggg 365  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||  || |||| || | ||||| ||| | |||||||| ||    
T  25834476 tcggaaaattattttattaaaaaataaaatttaatatttggatactgtcctgatacgtatcgagaaatatcaggcatgtatcagtgcaggatacgcacgg 25834575  T
Q  366 gatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  25834576 gatacgatacgtcatccaatttgaagtatcggggtttcaca 25834616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 26327305 - 26327152
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | |||||| ||||||||| || |||||||||||||||| || ||||||||||   ||||||||||| |||||||||| |||||||||||     
T  26327305 gtatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactctctt-atacgtatcgggaagtatcgggcaggtatcggtgc 26327207  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | ||||| |||| ||||||||||| |||||||||||||||||||||| |||||||    
T  26327206 aggatacacaggagatacgatacgtcatccattttgaagtatcggggcttcacag 26327152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 7188524 - 7188649
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||  || ||||||||||||||||||||||||||||||||||| |||  ||||| |||||| | |||||| |||||| | ||||||||||||||    
T  7188524 ccaaagtggttggtgaccactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 7188623  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||||||||||||||||    
T  7188624 ggcaccaaagaaagataaagaaaatg 7188649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 407
Target Start/End: Complemental strand, 27084102 - 27083982
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| ||||||||||||||  |||||||| || |||||| | | ||||||||||| | |||||||||||||||||||||| |||||||||    
T  27084102 aaataaaatttaatctttggatactctccttatacgtattgggaagtattgagcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattt 27084003  T
Q  387 tgaagtatcggggtttcacag 407  Q
    ||||||||||||| |||||||    
T  27084002 tgaagtatcggggcttcacag 27083982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 284 - 410
Target Start/End: Complemental strand, 234426 - 234300
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||| |||| ||||| || ||||||||| | ||||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||| || |||    
T  234426 aaaaaaaaaaagttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggagatacgatacgtcaacca 234327  T
Q  384 ttttgaagtatcggggtttcacagctt 410  Q
    |||||||||||||||| |||| |||||    
T  234326 ttttgaagtatcggggcttcagagctt 234300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 284 - 395
Target Start/End: Complemental strand, 32018097 - 32017986
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    ||||||||||||||||||||   ||||||| | ||||||||| ||||||||||||| || |||||||| | |||||||||||||||||||||| ||||||    
T  32018097 aaaaaataaaatttaatattcatatactctacggatacgtataggaaagtatcgggcagatatcggtgcaggatacgcaggggatacgatacgtcatcca 32017998  T
Q  384 ttttgaagtatc 395  Q
    ||||||||||||    
T  32017997 ttttgaagtatc 32017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 394
Target Start/End: Complemental strand, 19128305 - 19128163
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| |||||||||   ||||||||||||||||| || ||||||||| | |||||||||||||||||||||||  ||||| ||||    
T  19128305 cgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcgggtattggtg 19128206  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtat 394  Q
     | ||||| |||||||||||||||| || ||||||| ||||||    
T  19128205 caggatacacaggggatacgatacgtcaaccattttaaagtat 19128163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 253 - 406
Target Start/End: Original strand, 6708008 - 6708161
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | |||||| ||||||||| ||  ||||||| ||||||| || ||||||||||| ||||| ||| |||||||||| || |||||||||||     
T  6708008 gtatcgggaagtatcggataattatttttttttaaaataatatttaatcttcggatactctcctgatacatattggaaagtatcaggaaggtatcggtgc 6708107  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    | ||||| |||||||||| ||| | |||||||||| ||||||||||| ||||||    
T  6708108 atgatacacaggggatacaatatgtcatccattttaaagtatcggggcttcaca 6708161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 397
Target Start/End: Original strand, 31741124 - 31741267
Alignment:
Q  242 agtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggta 341  Q
    ||||| |||||||||||| | | ||||||||||||| ||||||||||||||||||| ||||||  | |||||||||||||          |||||||| |    
T  31741124 agtattcgtgcgtatcggaaagtatcggaaaattatcttcttaaaaaataaaatttgatattt--agactctcccgatac----------gtatcgggca 31741211  T
Q  342 ggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
    ||||||| || | ||| || ||||||||||||||| ||||||||||||||||||||    
T  31741212 ggtatcgatgcatgatgcgtaggggatacgatacgtcatccattttgaagtatcgg 31741267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 286 - 406
Target Start/End: Complemental strand, 3299259 - 3299139
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccatt 385  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||| ||||  | ||||||||||| | |||| |||| ||||||| |||  |||| |||    
T  3299259 aaaataaaatttaatctttaaatactctccagatacgtatcggaaaatatcatgcaggtatcggtgcaggatatgcagaggatacggtacatcatctatt 3299160  T
Q  386 ttgaagtatcggggtttcaca 406  Q
    |||||||||| ||| ||||||    
T  3299159 ttgaagtatcagggcttcaca 3299139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 13607795 - 13607903
Alignment:
Q  296 ttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    ||||| || ||||||||||| |||||||||| |||| |||  || ||||||| ||| | |||| |||| |||||||||||| ||||||||||||||||||    
T  13607795 ttaatcttcggatactctcctgatacgtatcagaaattattaggcaggtatcagtgcaggatatgcagaggatacgatacgtcatccattttgaagtatc 13607894  T
Q  396 ggggtttca 404  Q
     ||| ||||    
T  13607895 agggattca 13607903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 408
Target Start/End: Original strand, 10894584 - 10894694
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| |||||||||||||| |||||||||| |          | ||||||||||| | ||||||| ||||||||| |||| |||||||||    
T  10894584 aaataaaatttaatctttggatactctcctgatacgtatcag----------gcaggtatcggtgcatgatacgc-ggggatacggtacgtcatccattt 10894672  T
Q  387 tgaagtatcggggtttcacagc 408  Q
    ||||||||| ||| ||||||||    
T  10894673 tgaagtatcagggcttcacagc 10894694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 8357256 - 8357208
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||    
T  8357256 tgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaatg 8357208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 395
Target Start/End: Complemental strand, 11105418 - 11105295
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| | ||||||||||||||||| || | ||| ||| | |||||||||| ||||||||||   | |||||| || | ||||||||  | |||||    
T  11105418 aattattttttaaaaaaataaaatttaatcttcgaatattcttctgatacgtatcagaaagtatcgaacatgtatcgatgcaggatacgcaaagaatacg 11105319  T
Q  372 atacgacatccattttgaagtatc 395  Q
     |||| |||||||||| |||||||    
T  11105318 gtacgtcatccattttaaagtatc 11105295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 31079673 - 31079619
Alignment:
Q  343 gtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
    ||||||||| | |||||||||||||||| ||||| |||||||||| |||||||||    
T  31079673 gtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcgg 31079619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 22989332 - 22989437
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||||||||||||||  |  |||||| ||||||||||||| |||||||||| ||||| |||| ||| |  ||||||| | ||| | ||| | ||||||    
T  22989332 aaaaaataaaatttaatcatctgatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgcaagagatgcaatatgtcatcca 22989431  T
Q  384 ttttga 389  Q
    ||||||    
T  22989432 ttttga 22989437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 23799065 - 23798960
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||||||||||||||  |  |||||| ||||||||||||| |||||||||| ||||| |||| ||| |  ||||||| | ||| | ||| | ||||||    
T  23799065 aaaaaataaaatttaatcatctgatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgcaagagatgcaatatgtcatcca 23798966  T
Q  384 ttttga 389  Q
    ||||||    
T  23798965 ttttga 23798960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 7255002 - 7254938
Alignment:
Q  332 gtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
    |||||||| | ||||||||| | ||||| |||||||||||||||  | |||||||||||||||||    
T  7255002 gtatcgggcatgtatcggtgcatgatacacaggggatacgatacatcgtccattttgaagtatcg 7254938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 13061325 - 13061417
Alignment:
Q  306 gatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    ||||||||||  ||||||||| ||||||||| || || ||||| || | ||||||||| | ||| | |||| ||| |||||||||||||||||    
T  13061325 gatactctcctaatacgtatcagaaagtatcaggcagatatcgatgcaggatacgcagagaatatggtacgtcattcattttgaagtatcggg 13061417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 10894519 - 10894564
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcgga 329  Q
    |||||| |||||||||| || ||||||||||| |||||||||||||    
T  10894519 aaaaaacaaaatttaatcttcggatactctcctgatacgtatcgga 10894564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 238 - 407
Target Start/End: Original strand, 1639735 - 1639903
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  1639735 cacaagtatccgtgcgtatcgggacgtatcggataattatttttttaaaa-ataaaatttaatatttggatactcttcggatacgtatcgggaagtatcg 1639833  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || ||||||||||| | ||||||||||||||||  |||| |||||||||||||||||||||| |||||||    
T  1639834 ggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcacag 1639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 238 - 407
Target Start/End: Original strand, 32728661 - 32728830
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||| ||||||||||||||| || ||| ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  32728661 cacaagtatcagtgcgtatcgggacgtattggataattatttttttaaaaaataaaatctaatatttggatactctccggatacgtatcgggaagtatcg 32728760  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || |||||||| || |||||||||||||||||| ||||  |||| ||||||||||||||| | |||||||    
T  32728761 ggcaggtatcgatgcaagatacgcaggggatacaatacatcatcaattttgaagtatcggagcttcacag 32728830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 239 - 407
Target Start/End: Complemental strand, 10656984 - 10656817
Alignment:
Q  239 acaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    ||||||||  ||||||||| ||| | ||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||  |||||||||    
T  10656984 acaagtatatgtgcgtatcaggatgtatcagaaaattattttcttaaaaaaataaatt-aatatttggatactctcccgatacgtatcgagaagtatcgg 10656886  T
Q  339 gtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  10656885 gcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcggggcttcacag 10656817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 238 - 407
Target Start/End: Original strand, 32707773 - 32707952
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    ||||||||||||||||||||| |||| ||||||||          |||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  32707773 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 32707872  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | |||||||||| ||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  32707873 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 32707952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 252 - 409
Target Start/End: Original strand, 30777487 - 30777645
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaa-aataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||| | | |||||| ||||||||| | |||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  30777487 cgtatcggaaagtatcggataattattttataaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggt 30777586  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    | | |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  30777587 gcaggatacgcaagggatacgatacgtcatccattttgaagtatcggggcttcacagct 30777645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 39690742 - 39690884
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| | ||||||||||    
T  39690742 atcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagg 39690841  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  39690842 ggatacggtacgtcatccattttgaagtatcggggcttcacag 39690884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 5985812 - 5985945
Alignment:
Q  18 cactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgg 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||| ||| || |||||||| |||||     
T  5985812 cactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccccaatttttaagaaaggggaagatgaaattgtttatgtggtatggtgtga 5985911  T
Q  118 gtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||||||||||||||||| ||||||    
T  5985912 gtcgtactggcaccaaagaaagataaaaaaaatg 5985945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 26716425 - 26716270
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||| | ||||||||||||||||| || ||||||||| | |||||||||||| ||||||| || |||||||||||    
T  26716425 cgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtg 26716326  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || |||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  26716325 taggatacgcaggggatacgatacgtcatccattttgaagtatcgaggcttcacag 26716270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 26986165 - 26986010
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||| | ||||||||||||||||| || ||||||||| | |||||||||||| ||||||| || |||||||||||    
T  26986165 cgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtg 26986066  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || |||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  26986065 taggatacgcaggggatacgatacgtcatccattttgaagtatcgaggcttcacag 26986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 10657208 - 10657091
Alignment:
Q  34 gaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaa 133  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  10657208 gaaggcgaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttctgtggtgtggtgtgggtcgtactggcaccaa 10657109  T
Q  134 agaaagataaagaaaatg 151  Q
    |||||||||||| |||||    
T  10657108 agaaagataaaggaaatg 10657091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 249 - 408
Target Start/End: Complemental strand, 9792474 - 9792315
Alignment:
Q  249 gtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcg 348  Q
    ||||||||||||| | || ||| ||||||||| | |||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||    
T  9792474 gtgcgtatcgggatgtattggataattattttttaaaaaaataaaatttaatatttggatactctctggatacgtatcgggaagtatcgggcaggtatcg 9792375  T
Q  349 gtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
     || | ||||| ||||||||||| |||| |||||||||| ||||||||||| ||||||||    
T  9792374 atgcaggatacacaggggatacggtacgtcatccattttaaagtatcggggcttcacagc 9792315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 30918517 - 30918376
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||| ||||||| ||||||||| ||||||||||  ||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  30918517 atcggataattattttttaaaacaataaaaattaatattttgatactctccgaatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 30918418  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    |||||| ||||| |||||||||||||||||||||| ||||||    
T  30918417 ggatacaatacgtcatccattttgaagtatcggggcttcaca 30918376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 32625016 - 32624875
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||| |  ||||||||||| |||||||||| |||||||| || ||||||| ||||    
T  32625016 atcggataattattttttaaaaaaataaaatttaatatttggatactcttcgaatacgtatcgggaagtatcgggcaggtatcgatgcaagatacacagg 32624917  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    ||||||| |||| ||||||||||||| |||||||| ||||||    
T  32624916 ggatacggtacgtcatccattttgaaatatcggggcttcaca 32624875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 33830135 - 33830010
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  33830135 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 33830036  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    | |||||||||||||||||| |||||    
T  33830035 gacaccaaagaaagataaaggaaatg 33830010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 253 - 397
Target Start/End: Original strand, 30284574 - 30284718
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||||| | |||||| ||||||||| ||  ||||||||||||||| || ||||||||||| |||||||||||| ||||||| || |||||||||||     
T  30284574 gtatcgggaagtatcggataattatttttttttaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggtatcggtgc 30284673  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
    | ||||||||||||||||| |||| ||||||||||||||||||||    
T  30284674 aggatacgcaggggatacggtacgtcatccattttgaagtatcgg 30284718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 252 - 406
Target Start/End: Complemental strand, 1795545 - 1795390
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaa-taaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||||| | |||||| |||||||||   |||||| ||||||||||| || ||||||||| | ||||||||||||||||||||||| ||||||||||    
T  1795545 cgtatcgggaagtatcggataattatttttaaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggt 1795446  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    | | |||||| ||||||||||||||| || ||||||||||||||||||| ||||||    
T  1795445 gcaggatacggaggggatacgatacgtcaaccattttgaagtatcggggcttcaca 1795390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 26794737 - 26794855
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  26794737 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtttggtgtgggtcgtact 26794836  T
Q  126 ggcaccaaagaaagataaa 144  Q
    ||||||||| |||||||||    
T  26794837 ggcaccaaataaagataaa 26794855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 282 - 404
Target Start/End: Complemental strand, 33829875 - 33829753
Alignment:
Q  282 ttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatc 381  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| || | ||||||||| | ||||||||||||||||| |||| ||||    
T  33829875 ttaaaaaaaaaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcatgtatcggtgcaggatacgcaggggatacggtacgtcatc 33829776  T
Q  382 cattttgaagtatcggggtttca 404  Q
    |||||||||||||||||| ||||    
T  33829775 cattttgaagtatcggggcttca 33829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 12852484 - 12852359
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  12852484 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 12852385  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
     |||| |||||||||||||| |||||    
T  12852384 agcactaaagaaagataaaggaaatg 12852359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 395
Target Start/End: Original strand, 41392654 - 41392821
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    |||||||||||||||||||||||| | ||||||||          |||||||| ||  ||||||||||||||||||||||||||| || ||||| |||||    
T  41392654 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcagattattatttttttttaaaataaaatttaatatttggatactccccggatacatatcg 41392753  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    | |||||||||| ||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||    
T  41392754 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 41392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 30918726 - 30918608
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||| |||||  | |||||| |||||| | ||||||||||||||    
T  30918726 ccaaagtggacggcgaccacttaggaagaaaaagttgaaaccctaatttcttagaaagggaaagatccaattggttgtgtggtgtggtgtgggtcgtact 30918627  T
Q  126 ggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||    
T  30918626 ggcaccaaagaaagataaa 30918608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 1639526 - 1639651
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| ||| |||||| |||||| | ||| || |||||| | |||||| |||||||    
T  1639526 ccaaagtggacggcgaccactttggaagaaaaaattgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtggatcgtact 1639625  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  1639626 ggcaccaaagaaagataaaggaaatg 1639651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 26691768 - 26691621
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| |||||||||   ||||||||||||||||| || ||||||||||  |||||||||||| ||||||| |  |||||||||||    
T  26691768 cgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtg 26691669  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
     |  ||||||||||||||||||||| |||| |||||||||||||||||    
T  26691668 cagaatacgcaggggatacgatacgtcatctattttgaagtatcgggg 26691621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 26961500 - 26961353
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| |||||||||   ||||||||||||||||| || ||||||||||  |||||||||||| ||||||| |  |||||||||||    
T  26961500 cgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtg 26961401  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
     |  ||||||||||||||||||||| |||| |||||||||||||||||    
T  26961400 cagaatacgcaggggatacgatacgtcatctattttgaagtatcgggg 26961353  T

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Target: chr5; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 12852276 - 12852116
Alignment:
Q  238 cacaagtatccgtgcgtatcggg--acgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtat 335  Q
    |||||||||||||||||||||||  | | |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||| | ||        
T  12852276 cacaagtatccgtgcgtatcgggggatgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaa---- 12852181  T
Q  336 cgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
           ||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  12852180 -------gtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 12852116  T

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Target: chr5; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 265 - 409
Target Start/End: Original strand, 26794983 - 26795116
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||           ||||||||| | ||||||||||    
T  26794983 atcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggaaa-----------gtatcggtgcaggatacgcagg 26795071  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    |||||||||||| |||||||||| ||||||| ||| |||||||||    
T  26795072 ggatacgatacgtcatccattttaaagtatcagggcttcacagct 26795116  T

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Target: chr5; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 285 - 396
Target Start/End: Complemental strand, 11906337 - 11906226
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccat 384  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||  || |||||||| | ||||||||||| |||| ||||| |||||||    
T  11906337 aaaaataaaatttaatattcggatactctccggatacgtatcgggaagtatcggacagatatcggtgcaggatacgcagggaatacaatacgtcatccat 11906238  T
Q  385 tttgaagtatcg 396  Q
    ||||||||||||    
T  11906237 tttgaagtatcg 11906226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 294 - 396
Target Start/End: Complemental strand, 22774664 - 22774562
Alignment:
Q  294 atttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagta 393  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| | |||| ||||||||||||||||| || ||||||| |||||    
T  22774664 atttaatatttggatactctctcgatacgtatcggaaagtatcgggcagatatcggtgcaggatatgcaggggatacgatacgccaaccattttaaagta 22774565  T
Q  394 tcg 396  Q
    |||    
T  22774564 tcg 22774562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 3934784 - 3934896
Alignment:
Q  282 ttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatc 381  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||| ||||||| ||||||||||||||   |||||||||||||||  ||||| ||||    
T  3934784 ttaaaaaataaaatttaatcttcggatactctcctgatacgtatcggtaagtatcaggtaggtatcggtgcgggatacgcaggggatataatacgtcatc 3934883  T
Q  382 cattttgaagtat 394  Q
    |||||| ||||||    
T  3934884 cattttaaagtat 3934896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 268 - 376
Target Start/End: Original strand, 5986050 - 5986158
Alignment:
Q  268 ggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagggga 367  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |  ||||| || | |||||||||| ||    
T  5986050 ggaaaattatttttttaaaaaataaaatttaatatttggatactctcccaatacgtatcagaaagtatcggacatatatcgatgcaggatacgcaggaga 5986149  T
Q  368 tacgatacg 376  Q
    ||| |||||    
T  5986150 taccatacg 5986158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 399
Target Start/End: Original strand, 17138220 - 17138366
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | ||| || ||||| ||| | ||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| || |  ||||||||    
T  17138220 cgtatcgggaagtatcagataattactttttaaaaaaataaaatttaatcttcggatattctcctgatacgtatcgggaagtatcaggcaattatcggtg 17138319  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcgggg 399  Q
     | |||||||||||||||| ||||| |||| |||||||||||||||||    
T  17138320 caggatacgcaggggatac-atacgtcatctattttgaagtatcgggg 17138366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 252 - 406
Target Start/End: Original strand, 5612408 - 5612562
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||| ||| | |||||| ||||||||| | ||||||||||||||||| || ||||||||||| | |||||||| |||||||||||| || ||||  ||    
T  5612408 cgtatcaggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaatg 5612507  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
     | ||| | ||| | |||||||||| |||||||||||||||||| ||| ||||||    
T  5612508 caggatgcacagagaatacgatacgtcatccattttgaagtatctgggcttcaca 5612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 9792670 - 9792550
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||| | || | | ||||     ||||||||||||||    
T  9792670 ccaaagtggacggcgaccactttggaagaaaaagttggaaccctaatttcttagaaagggaaagatgcaattagctgtgtg-----gtgtgggtcgtact 9792576  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    | |||||||||||||||||| |||||    
T  9792575 gacaccaaagaaagataaaggaaatg 9792550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 272 - 395
Target Start/End: Complemental strand, 34032501 - 34032378
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| ||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||  | ||||||||||  | |||||||| ||||| ||    
T  34032501 aattatttttttaaaaaataaaaattaatcttcggatactctcctgatacgtatcgggaagtatcaagcaggtatcggtagatgatacgcaagggattcg 34032402  T
Q  372 atacgacatccattttgaagtatc 395  Q
    ||||  |||| |||||||||||||    
T  34032401 atacatcatctattttgaagtatc 34032378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 272 - 398
Target Start/End: Complemental strand, 5722119 - 5721993
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| || |||||||||||||||| || ||||||| ||| |||| |||| |  |||||||||| | ||||| ||| | |||||||||||||||||    
T  5722119 aattattttttttaaaaataaaatttaatcttcggatactttcctgatatgtattgagaagtatcgggcatgtatcagtgcaggatacgcaggggatacg 5722020  T
Q  372 atacgacatccattttgaagtatcggg 398  Q
    ||||| |||| ||||| || |||||||    
T  5722019 atacgtcatcaattttaaaatatcggg 5721993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 285 - 407
Target Start/End: Original strand, 6243168 - 6243279
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccat 384  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||           ||||||||| | ||||||||| |||||| ||||| |||||||    
T  6243168 aaaaataaaatttaatattcggatactctccggatacgtatcggaaa-----------gtatcggtgcaggatacgcagaggatacaatacgtcatccat 6243256  T
Q  385 tttgaagtatcggggtttcacag 407  Q
    ||||||||||||| | |||||||    
T  6243257 tttgaagtatcggagcttcacag 6243279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 7977404 - 7977317
Alignment:
Q  241 aagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    |||||||| ||||||||| || | |||||| ||||||||| | ||||||||||||||||||||| ||||||||||  |||||||||||    
T  7977404 aagtatccatgcgtatcgtgatgtatcggataattattttttaaaaaaataaaatttaatatttagatactctccgaatacgtatcgg 7977317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 14836500 - 14836390
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccat 384  Q
    ||||| |||| |||||||| ||||||||| | ||||||||||||||| ||||||  |  ||||| || | |||||||||||||||| ||||| || ||||    
T  14836500 aaaaaaaaaaattaatattcggatactcttctgatacgtatcggaaaatatcggacaaatatcgatgcaggatacgcaggggatacaatacgtcaaccat 14836401  T
Q  385 tttgaagtatc 395  Q
    |||||||||||    
T  14836400 tttgaagtatc 14836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 15066256 - 15066148
Alignment:
Q  286 aaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccatt 385  Q
    |||||||||||||||  |  |||||||| ||||||||||||||||| ||||||| || |||||||| |  |||| || ||||||||||||  |||| |||    
T  15066256 aaaataaaatttaatcatctgatactcttccgatacgtatcggaaaatatcgggcagatatcggtgcagaatacacatgggatacgatacatcatctatt 15066157  T
Q  386 ttgaagtat 394  Q
    |||||||||    
T  15066156 ttgaagtat 15066148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 406
Target Start/End: Original strand, 35746271 - 35746371
Alignment:
Q  306 gatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcac 405  Q
    |||||||||| |||||||||||||||||||  || |||||||| || | |||||| ||| ||||| ||||| |||| ||||||||||||||| | |||||    
T  35746271 gatactctcctgatacgtatcggaaagtattaggcaggtatcgatgcatgatacgtaggagatacaatacgtcatctattttgaagtatcggagcttcac 35746370  T
Q  406 a 406  Q
    |    
T  35746371 a 35746371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 39690267 - 39690338
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  39690267 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtaccggcaccaaagaaagataaagaaaatg 39690338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 252 - 351
Target Start/End: Original strand, 43357725 - 43357824
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||| | ||||||||||||||||| || |||||||||    ||||||||||||||||||| |  |||||||||||    
T  43357725 cgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttttaatacgtatcggaaagtatcagacaggtatcggtg 43357824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 21251585 - 21251533
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  21251585 aaaaaattaaatttaatattcggatactctcctgatacgtatcggaaagtatc 21251533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 7977559 - 7977488
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | ||||||||||||| |||||||||||||||||||| |||||    
T  7977559 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaaggaaatg 7977488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 41233477 - 41233388
Alignment:
Q  306 gatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatc 395  Q
    |||||||||| |||||||||||| ||||||| |  | |||||| || | |||||| |||  |||||||||| ||||||||||||||||||    
T  41233477 gatactctcctgatacgtatcgggaagtatcagacatgtatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaagtatc 41233388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 42366099 - 42366211
Alignment:
Q  282 ttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatc 381  Q
    ||||||||||| | ||||| || ||||| ||||| |||| |||| || || ||||||| ||||||| ||| | ||||||||||||||||  |||  ||||    
T  42366099 ttaaaaaataataattaatcttcggatattctcctgataggtattgggaaatatcgggcaggtatcagtgcaggatacgcaggggatacagtacatcatc 42366198  T
Q  382 cattttgaagtat 394  Q
     ||||||||||||    
T  42366199 tattttgaagtat 42366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 7629121 - 7629070
Alignment:
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||| ||||    
T  7629121 aagatacgcaggggatacgatacgtcatccattttgaggtatcagggcttca 7629070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 32625205 - 32625134
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | |||||||||||||  ||||||||||||||||||| |||||    
T  32625205 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgagcaccaaagaaagataaaggaaatg 32625134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 41392535 - 41392574
Alignment:
Q  112 gtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  41392535 gtgtgggtcgtactggcaccaaagaaagataaaggaaatg 41392574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 1920953 - 1920860
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacat 380  Q
    |||| ||||||||| || |||||||||||| ||||||||||| |||||||  | || |||||||| | ||||||||  ||||||  ||||||||    
T  1920953 aaatgaaatttaatcttcggatactctcccaatacgtatcgggaagtatcatgcagatatcggtgcatgatacgcaatggataccgtacgacat 1920860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 402
Target Start/End: Complemental strand, 27938311 - 27938165
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    ||||| |||| | |||||| ||||||||| | ||||||||||||||||| || ||||||||| | |||||  |     |  ||||| | | |||||||||    
T  27938311 cgtattgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatactgac----acatatcgagcatgtatcggtg 27938216  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggttt 402  Q
     | |||||||| | ||||| ||||| |||||||||||||||||||| ||||    
T  27938215 catgatacgcatgagatacaatacgtcatccattttgaagtatcggagttt 27938165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 27085483 - 27085432
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    |||||||||||||||| |  ||||||||||  ||||||||||||||||||||    
T  27085483 aaaaataaaatttaatttccggatactctcttgatacgtatcggaaagtatc 27085432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 365
Target Start/End: Complemental strand, 9653885 - 9653804
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggg 365  Q
    |||||||||||||||||  |   ||||||| |||||||||||||| |||||||||| |  |||||||| |  ||||||||||    
T  9653885 aaaaaataaaatttaatcatccaatactcttccgatacgtatcgggaagtatcgggcaaatatcggtgcagaatacgcaggg 9653804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 3701317 - 3701233
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggata 369  Q
    |||||||||||||||| ||  |||||||||| || || |||| | ||||||| |  || |||||||| | |||||||||||||||    
T  3701317 aaaaataaaatttaatcttcagatactctcctgaaacatatcaggaagtatcagacagatatcggtgcaggatacgcaggggata 3701233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 32707644 - 32707692
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  32707644 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatg 32707692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 3e-55; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 18301369 - 18301232
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||    
T  18301369 gaagcactgtatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaattttttagaaaggggaagatgaaattgtttctgtggtatggt 18301270  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18301269 gtgggtcgtactggcaccaaagaaagataaaggaaatg 18301232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 5371349 - 5371212
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| ||    
T  5371349 gaagcactatatccaaagtggaaggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggt 5371250  T
Q  114 gtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  5371249 gtgggtcgtactgacaccaaagaaagataaaggaaatg 5371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 7876853 - 7876711
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  7876853 atcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagg 7876754  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  7876753 ggatacggtacgtcatccattttgaagtatcggggcttcacag 7876711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 12819589 - 12819459
Alignment:
Q  14 gaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagt 113  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||  |    
T  12819589 gaagcactatatccaaagtggaaggcgaccattttggaagaaaaggttgaaaccctaattttttaaaaaggggaagatgaaattgtttctgtggtatgat 12819490  T
Q  114 gtgggtcgtactggcaccaaagaaagataaa 144  Q
    ||||||||||| |||||||||||||||||||    
T  12819489 gtgggtcgtaccggcaccaaagaaagataaa 12819459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 272 - 407
Target Start/End: Original strand, 38602308 - 38602443
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | |||||||||||||||||    
T  38602308 aattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacg 38602407  T
Q  372 atacgacatccattttgaagtatcggggtttcacag 407  Q
     |||| |||||||||||||||||||||| |||||||    
T  38602408 gtacgtcatccattttgaagtatcggggcttcacag 38602443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 16561951 - 16561797
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||||| | |||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||     
T  16561951 gtatcggaaagcatcggacaattattttataaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgc 16561852  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |  ||||||| |||||||| |||| |||||||||||||||||||||| |||||||    
T  16561851 agaatacgcaagggatacggtacgtcatccattttgaagtatcggggcttcacag 16561797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 33324994 - 33324814
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    ||||||||||||||||||||| |||| ||||||||          |||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  33324994 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 33324895  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    | |||||||||| ||||||||||| | ||||||||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  33324894 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttcacagc 33324814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 18301148 - 18300969
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    |||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18301148 cacaagtatccgtgcgtatcgggacgtatcggaaagtatcgaaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 18301049  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
      ||||||| |  ||||||||||| |  |||| |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  18301048 agaagtatcagacaggtatcggtgcagaatacacaggggatacgatacgtcatccattttgaagtatcagggcttcacag 18300969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 265 - 408
Target Start/End: Original strand, 40308876 - 40309019
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | |||||||| |    
T  40308876 atcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcatg 40308975  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    ||||||| |||| |||| ||||||||||||||||| ||||||||    
T  40308976 ggatacggtacgtcatctattttgaagtatcggggcttcacagc 40309019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 4170481 - 4170623
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| | ||||||||||    
T  4170481 atcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcagg 4170580  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||||| |||| |||||||||||||||||||| | |||||||    
T  4170581 ggatacggtacgtcatccattttgaagtatcggagcttcacag 4170623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 238 - 404
Target Start/End: Complemental strand, 22484433 - 22484267
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||| |||||||||||| | |||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  22484433 cacaagtatccatgcgtatcgggatgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcg 22484334  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    |  || ||||| || | ||||||||||| ||||| |||  |||||||||||||||||||||| ||||    
T  22484333 gacagatatcgatgcaggatacgcagggaatacggtacatcatccattttgaagtatcggggcttca 22484267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 252 - 405
Target Start/End: Complemental strand, 2319427 - 2319274
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||||| |||||| ||||||||| | ||||||||||||||||| || ||||||||| | |||||||||| | |||||||  | | |||||||||    
T  2319427 cgtatcgggacgtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcaggaagtatcaagcaagtatcggtg 2319328  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcac 405  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2319327 caagatacgcaggggatacgatacgtcatccattttgaagtatcggggtttcac 2319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 7807353 - 7807495
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||   ||||||||||  ||||||||||||    
T  7807353 atcggatagttattttttaaaaaaataaaatttaatatttggatactttccggatacgtatcgggaagtatcgaacaggtatcggtacaagatacgcagg 7807452  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  7807453 ggatacgatacgtcatccattttgaagtatcggggcttcacag 7807495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 20536931 - 20536772
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    |||||||||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||          |||    
T  20536931 cacaagtatccgtgcgtatcgggacgtatcggaaatttattttttttaaaaataaaatttaatatttggatactcttccgatacgta----------tcg 20536842  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    || | ||||||||| | |||| ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  20536841 ggcaagtatcggtgcaggatatgcaggggatacgatacgtcatccattttgaagtatcggggcttcacag 20536772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 265 - 398
Target Start/End: Original strand, 6497628 - 6497761
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| |  ||||||||||| | ||||||||||    
T  6497628 atcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagaatcagacaggtatcggtgcaggatacgcagg 6497727  T
Q  365 ggatacgatacgacatccattttgaagtatcggg 398  Q
    ||||||| |||| |||||||||||||||||||||    
T  6497728 ggatacggtacgtcatccattttgaagtatcggg 6497761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 6124312 - 6124170
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||  | ||||||||| | ||||| ||||    
T  6124312 atcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacacagg 6124213  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    |||||| ||||| |||||||||| ||||||||||| |||||||    
T  6124212 ggatacaatacgtcatccattttaaagtatcggggcttcacag 6124170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 396
Target Start/End: Complemental strand, 4355477 - 4355333
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||| ||| ||||||||||||||||||| |||| ||||||||| |||||||||||| |||||||  | |||||||||||    
T  4355477 cgtatcgggaagtatcggataattagttttttaaaaaataaaatttaatctttgcatactctcctgatacgtatcgggaagtatcaagcaggtatcggtg 4355378  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
     |  |||||||||| |||||||||| |||||||||||||||||||    
T  4355377 cagaatacgcagggaatacgatacgtcatccattttgaagtatcg 4355333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 6124561 - 6124437
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||||||||    
T  6124561 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 6124462  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    ||||||||||| |||||||| ||||    
T  6124461 ggcaccaaagatagataaaggaaat 6124437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 28746622 - 28746773
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||    |||||| |||| ||||| || ||||||||| | ||||||||||| ||||||||||| |||||||||||    
T  28746622 cgtatcgggaagtatcggataattattt----aaaaaaaaaaaattaatcttcggatactcttctgatacgtatcgaaaagtatcgggcaggtatcggtg 28746717  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     | |||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  28746718 caggatacgcaggggatacgatacgtcaaccattttgaagtatcggggcttcacag 28746773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 20537110 - 20536975
Alignment:
Q  15 aagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtg 114  Q
    |||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||| ||||||||||||||| ||| || | |||| | |||    
T  20537110 aagcactatatccaaagtggaaggcgaccattttgaaaaaaaaaattgaaaccctaattttttagaaaggggaagatgaaattgtttgtttggtttggtg 20537011  T
Q  115 tgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||| ||| | |||||||||||||||| |||||    
T  20537010 tgggtcgt-ctgtccccaaagaaagataaaggaaatg 20536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 252 - 396
Target Start/End: Complemental strand, 35996794 - 35996651
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||| ||||||||| ||||||||||||||||||| || | ||||||||| ||||||||||| |||||||||   |||||||||||    
T  35996794 cgtatcgggaagtatcggataattatttt-ttaaaaaataaaatttaatcttcgaatactctcctgatacgtatcgaaaagtatcgaacaggtatcggtg 35996696  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
     |||||||||||||||||| ||||  ||| |||||||||||||||    
T  35996695 caagatacgcaggggatacaatacatcattcattttgaagtatcg 35996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 1776402 - 1776557
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||| |  ||| |||| ||||||||||||||||||| || ||||||||| | |||||||||||||||  |||||| |||||||||||    
T  1776402 cgtatcgggaagtatcgaatgattttttttttaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaatgatcgggcaggtatcggtg 1776501  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     |  ||||||| ||||||||||||| || ||||||||||||||||||| |||||||    
T  1776502 cagaatacgcaagggatacgatacgtcaaccattttgaagtatcggggcttcacag 1776557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 252 - 397
Target Start/End: Complemental strand, 34146332 - 34146187
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||| ||| | |||||| ||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| ||||||| || || ||||||||    
T  34146332 cgtatcaggaagtatcggataattattttttttaaaaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcaggcagatatcggtg 34146233  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
     |  ||||||||  ||||||||||| |||||||||| |||||||||    
T  34146232 cagaatacgcagaagatacgatacgtcatccattttaaagtatcgg 34146187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 40308582 - 40308705
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| || |||||| | |||||| |||| | | ||||||||||||||    
T  40308582 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaa-ggaaagatgcaattggttgtgtgatgtggtgtgggtcgtact 40308680  T
Q  126 ggcaccaaagaaagataaagaaaat 150  Q
    ||||| |||||||||||||| ||||    
T  40308681 ggcactaaagaaagataaaggaaat 40308705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 398
Target Start/End: Complemental strand, 35342470 - 35342323
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttctta-aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||||| | ||| || ||||||||| ||  |||||||||||||||| || |||||||||   |||||||||||| ||||||| |||||||||||||    
T  35342470 cgtatcgggaagtatcagataattatttttttttaaaaataaaatttaatcttcggatactcttttgatacgtatcgggaagtatcaggtaggtatcggt 35342371  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    | | |||||||| |||||||| |||| |||||||||||||||||||||    
T  35342370 gcaggatacgcaagggatacggtacgtcatccattttgaagtatcggg 35342323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 22484641 - 22484515
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatg-aagttggttctgtggtatagtgtgggtcgtac 124  Q
    |||||||||| || |||||||||||||||||||||||||||| |||||| |||  ||||| |||||| || | |||| |||||| | |||||||||||||    
T  22484641 ccaaagtggacggtgaccactttggaagaaaaagttgaaaccttaatttcttagtaagggaaagatgtaattgggttgtgtggtgtggtgtgggtcgtac 22484542  T
Q  125 tggcaccaaagaaagataaagaaaatg 151  Q
    ||||||||||||||||||||| |||||    
T  22484541 tggcaccaaagaaagataaaggaaatg 22484515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 4170259 - 4170379
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||| || ||||     ||||||||||||||    
T  4170259 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtg-----gtgtgggtcgtact 4170353  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    | |||||||||||||||||| |||||    
T  4170354 gacaccaaagaaagataaaggaaatg 4170379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 6497409 - 6497529
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| | ||  || ||||     ||||||||||||||    
T  6497409 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattttttgtgtg-----gtgtgggtcgtact 6497503  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||| |||||    
T  6497504 ggcaccaaagaaagataaaggaaatg 6497529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 265 - 398
Target Start/End: Original strand, 8482896 - 8483029
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| | ||||||||||||||||| || ||||||||| | |||||||||||||||||||| |  || |||||||| | ||||||||      
T  8482896 atcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcagacagatatcggtgcaggatacgcaaa 8482995  T
Q  365 ggatacgatacgacatccattttgaagtatcggg 398  Q
    |||||||||||| ||| |||||||||||||||||    
T  8482996 ggatacgatacgtcattcattttgaagtatcggg 8483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 22571054 - 22570937
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||||||||||||||| || |||||||||| | |||||||||| ||||||||||| | ||||||||| ||||||| |||| |||| ||||    
T  22571054 aaataaaatttaatatttggatactccccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatctattt 22570955  T
Q  387 tgaagtatcggggtttca 404  Q
    ||||||||| ||| ||||    
T  22570954 tgaagtatctgggcttca 22570937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 404
Target Start/End: Complemental strand, 44156750 - 44156597
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaa-taaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||| ||| | |||||| ||||||||| | |||||| ||||||||||| || ||||||||||| |||||||||||| ||||||| |  | |||||| |    
T  44156750 cgtatcaggaagtatcggataattattttttaaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacatgtatcgat 44156651  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    | | |||||||||||||||||||| | |||||||||||||||||||||| ||||    
T  44156650 gcatgatacgcaggggatacgatatgtcatccattttgaagtatcggggattca 44156597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 4561941 - 4561785
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaa-taaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggt 350  Q
    |||||||||| | ||| || ||||||||| |||||||| ||||||||||| || ||||||||| | |||| ||||||| |||||||||| ||||||||||    
T  4561941 cgtatcgggaagtatcagataattatttttttaaaaaaataaaatttaatcttcggatactcttctgatatgtatcgggaagtatcgggcaggtatcggt 4561842  T
Q  351 gtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    | | ||||| || || |||||||||| ||||||||||||||||| || | |||||||    
T  4561841 gcaggatacacaaggaatacgatacgtcatccattttgaagtattggagcttcacag 4561785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 429 - 508
Target Start/End: Original strand, 12150798 - 12150877
Alignment:
Q  429 gtaaattacatttgacattacatctacatcttcaattttttccgtcaattaccggtatcttcaagcctttccttgaagca 508  Q
    ||||| ||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||| |||||||||    
T  12150798 gtaaactacatttgacattacatctacatcttcaatttttttcatccattaccggtatcttcaagccttttcttgaagca 12150877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 14217152 - 14217265
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    |||||| |||||||||| ||| |||||||||| ||||||||||||||||||||    || |||||||| |  ||||||||||||||| ||||| ||||||    
T  14217152 aaaaaaaaaaatttaatctttagatactctccagatacgtatcggaaagtatcaaacagatatcggtgcagaatacgcaggggatacaatacgtcatcca 14217251  T
Q  384 ttttgaagtatcgg 397  Q
    ||||||||||||||    
T  14217252 ttttgaagtatcgg 14217265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 5371120 - 5371057
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaata 301  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5371120 cacaagtatccgtgtgtatcgggacgtatcggaaaattattttcttaaaaaataaaatttaata 5371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 31236152 - 31236307
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    |||||||||| | |||||   |||||||| | ||||| ||||||||||| || ||||||||||| |||||||||||| || ||||  | |||| | ||||    
T  31236152 cgtatcgggaagtatcggctgattattttttaaaaaattaaaatttaatcttcggatactctcctgatacgtatcgggaaatatcatgcaggtgtgggtg 31236251  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
     | |||||||||||||||| |||||  ||||||||| ||||||||||| |||||||    
T  31236252 caggatacgcaggggatacaatacgttatccattttaaagtatcggggcttcacag 31236307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 40497384 - 40497486
Alignment:
Q  285 aaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccat 384  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||| |  |||||||  || ||||||||||||||||| | |||| |||||||    
T  40497384 aaaaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacaggtatcactgcaagatacgcaggggataaggtacgtcatccat 40497483  T
Q  385 ttt 387  Q
    |||    
T  40497484 ttt 40497486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 283 - 404
Target Start/End: Complemental strand, 24585650 - 24585530
Alignment:
Q  283 taaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcc 382  Q
    ||||||| |||| ||||| ||||||||| |||| |||||||||| | ||||||| |  ||||||||||| | |||||||| ||||||||||||  |||||    
T  24585650 taaaaaaaaaaaattaatctttggatacactcctgatacgtatctggaagtatcagacaggtatcggtgcaggatacgca-gggatacgatacatcatcc 24585552  T
Q  383 attttgaagtatcggggtttca 404  Q
    ||||||||||||||||| ||||    
T  24585551 attttgaagtatcggggcttca 24585530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 1005629 - 1005522
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| ||  |||||||| |  ||||||||||| ||||||||   ||||||||||| | |||||||||||||||||||||| |||||||||    
T  1005629 aaataaaatttaatcttcagatactcttctaatacgtatcgggaagtatcgac-aggtatcggtgcaggatacgcaggggatacgatacgtcatccattt 1005531  T
Q  387 tgaagtatc 395  Q
    |||||||||    
T  1005530 tgaagtatc 1005522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 272 - 394
Target Start/End: Complemental strand, 25933697 - 25933575
Alignment:
Q  272 aattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacg 371  Q
    ||||||||| | ||||||| ||||||||| || ||||||||||| |||  ||||||  ||||||| | ||| ||| |||| | |||||||||||||||||    
T  25933697 aattattttttcaaaaaattaaatttaatcttcggatactctcctgatctgtatcgagaagtatcagatagatattggtgcatgatacgcaggggatacg 25933598  T
Q  372 atacgacatccattttgaagtat 394  Q
    ||||  |||||||||||||||||    
T  25933597 atacatcatccattttgaagtat 25933575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 45159344 - 45159418
Alignment:
Q  332 gtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcaca 406  Q
    |||||||| || ||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  45159344 gtatcgggcagatattggtgcaagatacgcaagggatacgatacgtcatccattttgaagtatcggggcttcaca 45159418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 7877035 - 7876964
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  7877035 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaagaaaatg 7876964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 21104621 - 21104482
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| |||||||||   ||||| || |||||||| || ||||||||    |||||||||||| || |||| |  || |||||||| |||||||||||     
T  21104621 atcggataattatttttaaaaaaagtataatttaatcttcggatactcctttgatacgtatcgggaaatatcagacagatatcggtgcaagatacgcaga 21104522  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    |||||||||||| |||||||||| |||||| |||| ||||    
T  21104521 ggatacgatacgtcatccattttaaagtattggggcttca 21104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 12206142 - 12206036
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| || | ||||||||| ||||||||| | ||| |||| || |||||||| || ||||||| |||  ||||||||||| |||||||||    
T  12206142 aaataaaatttaatcttcgaatactctcctgatacgtattgaaaaatatcaggcaggtatcgatgcaagatacacagatgatacgatacgtcatccattt 12206043  T
Q  387 tgaagta 393  Q
    | |||||    
T  12206042 taaagta 12206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 3563992 - 3563908
Alignment:
Q  252 cgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatc 336  Q
    |||||||||| | ||| || ||||||||| | || |||||||||||||| || ||||||||||| |||||||||||| |||||||    
T  3563992 cgtatcgggaagtatcagataattattttttaaagaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatc 3563908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 407
Target Start/End: Complemental strand, 5588208 - 5588104
Alignment:
Q  303 ttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggttt 402  Q
    ||||||||||||  |||| ||||| | ||||||  |  ||||||||||| |||||||  || |||||||||||| |||||||||||||||||||| | ||    
T  5588208 ttggatactctcatgatatgtatcaggaagtatgagacaggtatcggtgcaagatacaaagaggatacgatacgtcatccattttgaagtatcggagctt 5588109  T
Q  403 cacag 407  Q
    |||||    
T  5588108 cacag 5588104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 16562130 - 16562059
Alignment:
Q  80 aaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| |||||| | |||||| |||||| | |||||||||||||| ||||||||||||||||||| |||||    
T  16562130 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtactagcaccaaagaaagataaaggaaatg 16562059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 3545547 - 3545691
Alignment:
Q  253 gtatcgggacgcatcggaaaattatt-ttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtg 351  Q
    ||||||||| ||||| || ||||||| || ||  ||||||||||||||| || |||| |||||| ||||| |||||  ||||||| |  | |||||||||    
T  3545547 gtatcgggaagcatctgataattattatttttttaaaataaaatttaatcttcggatgctctcctgatacatatcgagaagtatcagacaagtatcggtg 3545646  T
Q  352 taagatacgcaggggatacgatacgacatccattttgaagtatcg 396  Q
     |  ||||| |   ||||||||||| |||||||||||||||||||    
T  3545647 cagaatacgtaaaagatacgatacgtcatccattttgaagtatcg 3545691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 37134299 - 37134407
Alignment:
Q  287 aaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattt 386  Q
    |||||||||||||| ||   ||||||||  |||||||||||| |||||||  | || |||| ||| | ||||||||| ||||||| |||| |||| ||||    
T  37134299 aaataaaatttaatcttcatatactctcttgatacgtatcgggaagtatcaagcagatatcagtgcaggatacgcagaggatacggtacgtcatctattt 37134398  T
Q  387 tgaagtatc 395  Q
    |||||||||    
T  37134399 tgaagtatc 37134407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 22571239 - 22571200
Alignment:
Q  112 gtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  22571239 gtgtgggtcgtactggcaccaaagaaagataaaggaaatg 22571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 395
Target Start/End: Complemental strand, 43214682 - 43214581
Alignment:
Q  296 ttaatatttggatactctcccgatac--gtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagta 393  Q
    ||||| || ||||||||||| ||||   ||||||| |||||||||  || ||||| || | ||||| || ||||||||||||| ||||||||||||||||    
T  43214682 ttaatcttcggatactctcctgatatatgtatcgggaagtatcggtcagatatcgatgcaggatacacatgggatacgatacgtcatccattttgaagta 43214583  T
Q  394 tc 395  Q
    ||    
T  43214582 tc 43214581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 404
Target Start/End: Complemental strand, 3563893 - 3563851
Alignment:
Q  362 aggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||    
T  3563893 aggggatacaatacgtcatccattttgaagtatcggggcttca 3563851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 344 - 398
Target Start/End: Complemental strand, 14824208 - 14824154
Alignment:
Q  344 tatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggg 398  Q
    |||||||| | |||||||| | ||||||||||| |||| ||||||||||||||||    
T  14824208 tatcggtgcatgatacgcaagagatacgatacgtcatctattttgaagtatcggg 14824154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 12819350 - 12819298
Alignment:
Q  355 gatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
    ||||| ||||||||||| |||  |||||||||||||||||| ||| |||||||    
T  12819350 gatacacaggggatacggtacatcatccattttgaagtatcagggcttcacag 12819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 33325128 - 33325080
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  33325128 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatg 33325080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 38602133 - 38602181
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  38602133 tgtggtttggtgtgggtcgtactagcaccaaaaaaagataaaggaaatg 38602181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 8034 - 8214
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaa----------attattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 327  Q
    ||||||||||||||||||||| |||| ||||||||          |||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  8034 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 8133  T
Q  328 gaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagc 408  Q
    | |||||||||| ||||||||||| | ||||||||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  8134 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttcacagc 8214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 7900 - 7948
Alignment:
Q  103 tgtggtatagtgtgggtcgtactggcaccaaagaaagataaagaaaatg 151  Q
    |||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  7900 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatg 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 30423 - 30565
Alignment:
Q  265 atcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcagg 364  Q
    |||||| ||||||||| ||  |||||||||||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||||| ||||||||||    
T  30423 atcggataattatttttttttaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgtaggatacgcagg 30522  T
Q  365 ggatacgatacgacatccattttgaagtatcggggtttcacag 407  Q
      ||||| ||||  ||||||||||||||||||||| |||||||    
T  30523 aaatacggtacgttatccattttgaagtatcggggcttcacag 30565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 30181 - 30299
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||| | |||||| |||||| | ||||||||| ||||    
T  30181 ccaaagtggacggcgaccactttgaaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcatact 30280  T
Q  126 ggcaccaaagaaagataaa 144  Q
    |||||||||||||||||||    
T  30281 ggcaccaaagaaagataaa 30299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 27746 - 27905
Alignment:
Q  241 aagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggt 340  Q
    ||||||||||||||||| ||||  |||||| ||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||               
T  27746 aagtatccgtgcgtatcaggacatatcggataattattttttaaaaaaataaaatttaatatttggatactctgcggatacgtatcgga----------c 27835  T
Q  341 aggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
    ||||||||||| | |||| |||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  27836 aggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 27905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 27523 - 27646
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggtt-----ctgtggtatagtgtgggtc 120  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||| |||||| |||||| | ||| ||      |||||| | |||||||||    
T  27523 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccttaatttcttagaaagggaaagatgcaattgtttgtatggtgtggtgtggtgtgggtc 27622  T
Q  121 gtactggcaccaaagaaagataaa 144  Q
    ||||||||||||||||||||||||    
T  27623 gtactggcaccaaagaaagataaa 27646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 44350 - 44475
Alignment:
Q  26 ccaaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtact 125  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||| |||| ||||| |||||| | |||||| |||||| | ||||||||||||||    
T  44350 ccaaagtggacgatgaccactttggaagaaaaagttgaaaccctaatttcttaataagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 44449  T
Q  126 ggcaccaaagaaagataaagaaaatg 151  Q
     ||||||||||||||||||| |||||    
T  44450 agcaccaaagaaagataaaggaaatg 44475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 44563 - 44653
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    |||||||||||||| ||||||||| | |||||| ||||||||| | ||| || ||||||||||||||||||||||||| ||||||||||||    
T  44563 cacaagtatccgtgtgtatcgggatgtatcggataattattttttaaaagaaaaaaatttaatatttggatactctccggatacgtatcgg 44653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 44659 - 44713
Alignment:
Q  355 gatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagct 409  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  44659 gatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 44713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 42028 - 42183
Alignment:
Q  238 cacaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcg 337  Q
    ||||||||||||||||||| || ||| |||||| ||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||          
T  42028 cacaagtatccgtgcgtatgggaacgtatcggataattatttttttaaaaaataaaatttaatatttggatactctctagatacgtatcgggaa------ 42121  T
Q  338 ggtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttca 404  Q
         ||||||||| | ||||||||||||||||  |||| |||||||||||||||||||||| ||||    
T  42122 -----gtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttca 42183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 41822 - 41939
Alignment:
Q  27 caaagtggaaggcgaccactttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaagttggttctgtggtatagtgtgggtcgtactg 126  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||| | |||||| | ||| || |||||| | || ||||||||||||    
T  41822 caaagtggacgacgaccactttggaagaaaaagttgaaaccctaatttcttagaaagcgaaagatgcaattgtttgtgtggtgtggtatgggtcgtactg 41921  T
Q  127 gcaccaaagaaagataaa 144  Q
     |||||||||||||||||    
T  41922 acaccaaagaaagataaa 41939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 239 - 410
Target Start/End: Original strand, 25494 - 25654
Alignment:
Q  239 acaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgg 338  Q
    |||||||||||| ||||||| |||| ||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||           
T  25494 acaagtatccgttcgtatcgagacgtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaa------- 25586  T
Q  339 gtaggtatcggtgtaagatacgcaggggatacgatacgacatccattttgaagtatcggggtttcacagctt 410  Q
        ||||||||| |  |||||||||||||||| | || |||||||||||||||||||||| ||||||||||    
T  25587 ----gtatcggtgcagaatacgcaggggatacggtgcgtcatccattttgaagtatcggggcttcacagctt 25654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 397
Target Start/End: Complemental strand, 13400 - 13257
Alignment:
Q  253 gtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgt 352  Q
    ||||| ||| |||||||| ||||||||| | ||||||||||||||||| ||  |||||||||  |||||||||||| ||||||| |  |||||||||||     
T  13400 gtatcaggaagcatcggataattatttt-taaaaaaataaaatttaatcttcagatactctcttgatacgtatcgggaagtatctgacaggtatcggtgc 13302  T
Q  353 aagatacgcaggggatacgatacgacatccattttgaagtatcgg 397  Q
    | |||||||||| ||||||||||| ||||||||||||||||||||    
T  13301 aggatacgcaggagatacgatacgtcatccattttgaagtatcgg 13257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 406
Target Start/End: Complemental strand, 10720 - 10598
Alignment:
Q  284 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggtaggtatcggtgtaagatacgcaggggatacgatacgacatcca 383  Q
    ||||| ||| ||||||| ||  |||||||||| |||||||||||  |||||||||| | ||||||||| | ||||||||||||||| | |||  ||||||    
T  10720 aaaaagtaacatttaatcttctgatactctcctgatacgtatcgagaagtatcgggcaagtatcggtgcatgatacgcaggggatatggtacatcatcca 10621  T
Q  384 ttttgaagtatcggggtttcaca 406  Q
    |||| ||||||| ||| ||||||    
T  10620 ttttaaagtatctgggcttcaca 10598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 14017 - 13932
Alignment:
Q  239 acaagtatccgtgcgtatcgggacgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 328  Q
    |||||||| |||||||||||| | | ||| || ||||||||    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  14017 acaagtatacgtgcgtatcggaaagtatctgataattattt----aaaaaaaaaaatttaatatttggatactctccggatacgtatcgg 13932  T

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