View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2840_high_33 (Length: 232)
Name: NF2840_high_33
Description: NF2840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2840_high_33 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 21396831 - 21397037
Alignment:
| Q |
18 |
ttttctagatatattttggctggtatagcagctgctatctgacacatctatgagacccccatgaacttattaaatgaccaagattcaggaagttaataat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21396831 |
ttttctagatatattttggctggtatagcagctgctatctgacacatctatgagacccccatgaacttattaaatgaccaagattcaggaagttaataat |
21396930 |
T |
|
| Q |
118 |
tattatgaatgacaataataacgcattcaccaccgacaccccaaaactagatctcccctaacttggcatttattgtagtagaaaaaattgaaatatgatt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21396931 |
tattatgaatgacaataataacgcattcaccaccgacaccccaaaactagatctcccctaacttggcatttattgtagtagaaaaaattgaaatatgatt |
21397030 |
T |
|
| Q |
218 |
gatgatg |
224 |
Q |
| |
|
||||||| |
|
|
| T |
21397031 |
gatgatg |
21397037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University