View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2840_low_30 (Length: 251)
Name: NF2840_low_30
Description: NF2840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2840_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 22041426 - 22041661
Alignment:
| Q |
4 |
aaacactttccaaattgttgtaaattcatggttaattatttttgtttgtatcacataaaggtagagcagnnnnnnnn--caaataaaagaaaagaaagag |
101 |
Q |
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| T |
22041426 |
aaacactttccaaattgttgtaaattcatggttaattatttttgtttgtatcacataaaggtagagcagttttttttttcaaataaaagaaaagaaagac |
22041525 |
T |
|
| Q |
102 |
ttgaacattttatagccattgcagagagttgatttataattccttagaaaataatcaaatgatttgaccacaaagttccttcttgatgtatcaaggttaa |
201 |
Q |
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| T |
22041526 |
ttgaacattttatagccattgcagagagttgatttataattccttagaaaataatcaaatgatttgaccacaaagttccttcttgatgtatcaaggttaa |
22041625 |
T |
|
| Q |
202 |
catctttatcaaatacattttgttaattaatatatt |
237 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
22041626 |
catctttatcaaatacattttgttaattaatatatt |
22041661 |
T |
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