View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2840_low_6 (Length: 468)

Name: NF2840_low_6
Description: NF2840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2840_low_6
NF2840_low_6
[»] chr1 (28 HSPs)
chr1 (17-446)||(1255258-1255687)
chr1 (127-214)||(7273998-7274085)
chr1 (126-218)||(40304109-40304201)
chr1 (126-224)||(49516992-49517091)
chr1 (140-225)||(23544687-23544773)
chr1 (134-218)||(4549797-4549881)
chr1 (153-225)||(17628549-17628621)
chr1 (126-197)||(48748659-48748729)
chr1 (149-214)||(4622039-4622104)
chr1 (127-184)||(6659627-6659684)
chr1 (137-225)||(37842403-37842491)
chr1 (127-218)||(48282057-48282149)
chr1 (166-225)||(4548684-4548743)
chr1 (154-225)||(9656601-9656672)
chr1 (128-207)||(45107548-45107626)
chr1 (154-225)||(51695543-51695613)
chr1 (127-197)||(870969-871039)
chr1 (126-216)||(44032056-44032146)
chr1 (131-193)||(46499934-46499996)
chr1 (266-346)||(1662629-1662712)
chr1 (166-227)||(4576768-4576829)
chr1 (153-218)||(16322799-16322864)
chr1 (272-317)||(24502791-24502836)
chr1 (273-318)||(26179534-26179579)
chr1 (151-215)||(17577826-17577890)
chr1 (133-225)||(33186005-33186097)
chr1 (141-197)||(50319230-50319286)
chr1 (127-163)||(52013821-52013857)
[»] chr6 (31 HSPs)
chr6 (127-218)||(29274284-29274375)
chr6 (125-225)||(25099964-25100065)
chr6 (126-217)||(9732399-9732490)
chr6 (128-210)||(10154146-10154228)
chr6 (133-218)||(14492233-14492317)
chr6 (141-225)||(24476540-24476624)
chr6 (127-186)||(2514626-2514685)
chr6 (140-223)||(9093606-9093689)
chr6 (127-173)||(10616886-10616932)
chr6 (130-218)||(5550059-5550147)
chr6 (127-218)||(10400193-10400284)
chr6 (150-210)||(24782006-24782066)
chr6 (142-218)||(33787800-33787876)
chr6 (271-345)||(8420129-8420206)
chr6 (126-221)||(32386615-32386710)
chr6 (145-215)||(323753-323823)
chr6 (127-197)||(3217266-3217336)
chr6 (127-225)||(10032495-10032593)
chr6 (128-214)||(10452419-10452505)
chr6 (127-193)||(29269820-29269886)
chr6 (128-215)||(1810361-1810445)
chr6 (179-216)||(18264305-18264342)
chr6 (273-318)||(27693401-27693446)
chr6 (141-193)||(430456-430508)
chr6 (126-158)||(740983-741015)
chr6 (126-214)||(4247694-4247781)
chr6 (127-211)||(9027501-9027585)
chr6 (134-182)||(10616798-10616846)
chr6 (127-163)||(31668795-31668831)
chr6 (101-159)||(32386213-32386268)
chr6 (127-215)||(33068619-33068707)
[»] chr8 (29 HSPs)
chr8 (126-225)||(13652138-13652237)
chr8 (126-225)||(13710781-13710880)
chr8 (126-217)||(29699177-29699268)
chr8 (144-218)||(1470911-1470985)
chr8 (129-215)||(10727123-10727209)
chr8 (127-225)||(28769387-28769485)
chr8 (134-227)||(10114421-10114513)
chr8 (142-225)||(4558737-4558820)
chr8 (141-218)||(12361130-12361207)
chr8 (141-218)||(42597339-42597416)
chr8 (128-218)||(5071022-5071112)
chr8 (127-193)||(14482126-14482192)
chr8 (144-217)||(16210942-16211015)
chr8 (144-223)||(31705025-31705105)
chr8 (127-186)||(35534948-35535007)
chr8 (126-225)||(38874569-38874668)
chr8 (267-348)||(7008656-7008739)
chr8 (127-225)||(30013143-30013240)
chr8 (142-208)||(31915334-31915400)
chr8 (101-177)||(12972757-12972830)
chr8 (118-159)||(35298592-35298633)
chr8 (126-223)||(39551259-39551356)
chr8 (126-218)||(42764189-42764282)
chr8 (166-218)||(4510991-4511043)
chr8 (126-210)||(7026654-7026738)
chr8 (141-225)||(7514516-7514600)
chr8 (142-218)||(9699940-9700016)
chr8 (130-186)||(10079150-10079206)
chr8 (137-225)||(11795026-11795114)
[»] chr7 (27 HSPs)
chr7 (132-225)||(28340892-28340985)
chr7 (127-210)||(35536031-35536114)
chr7 (126-218)||(29574656-29574748)
chr7 (126-225)||(27548186-27548285)
chr7 (126-204)||(45593788-45593866)
chr7 (152-225)||(40689034-40689107)
chr7 (145-228)||(3802184-3802267)
chr7 (126-197)||(7244625-7244696)
chr7 (127-197)||(27121662-27121732)
chr7 (128-225)||(27492720-27492817)
chr7 (137-225)||(3501014-3501102)
chr7 (129-197)||(24973870-24973938)
chr7 (126-225)||(27481342-27481441)
chr7 (151-218)||(30456505-30456572)
chr7 (127-186)||(31341118-31341177)
chr7 (127-218)||(49060464-49060555)
chr7 (130-216)||(3610797-3610883)
chr7 (127-217)||(5373149-5373239)
chr7 (101-225)||(22759085-22759208)
chr7 (139-225)||(28165027-28165113)
chr7 (139-217)||(45813236-45813314)
chr7 (126-227)||(991993-992094)
chr7 (128-197)||(3241366-3241435)
chr7 (143-216)||(6824858-6824931)
chr7 (160-225)||(18350755-18350820)
chr7 (128-197)||(46213728-46213797)
chr7 (129-197)||(33894549-33894616)
[»] chr2 (30 HSPs)
chr2 (144-225)||(18066069-18066150)
chr2 (130-225)||(3673734-3673829)
chr2 (138-225)||(13866824-13866911)
chr2 (127-225)||(17952749-17952847)
chr2 (127-225)||(37053518-37053616)
chr2 (139-228)||(2416249-2416338)
chr2 (126-218)||(3102616-3102708)
chr2 (139-225)||(15377701-15377787)
chr2 (132-217)||(11344340-11344425)
chr2 (134-215)||(25609727-25609808)
chr2 (118-186)||(43530198-43530266)
chr2 (128-219)||(33944530-33944621)
chr2 (154-225)||(42817424-42817495)
chr2 (139-217)||(5133708-5133786)
chr2 (129-195)||(16946968-16947034)
chr2 (129-195)||(17017633-17017699)
chr2 (135-197)||(32098384-32098446)
chr2 (271-356)||(43985270-43985358)
chr2 (153-218)||(1742087-1742152)
chr2 (156-221)||(9395083-9395148)
chr2 (133-217)||(14299687-14299771)
chr2 (133-218)||(35755557-35755642)
chr2 (134-218)||(1646945-1647029)
chr2 (134-218)||(4026748-4026832)
chr2 (126-197)||(11393441-11393513)
chr2 (101-172)||(11393756-11393824)
chr2 (126-197)||(11410102-11410174)
chr2 (101-172)||(11410417-11410485)
chr2 (128-188)||(31461363-31461423)
chr2 (126-194)||(35459833-35459901)
[»] chr3 (32 HSPs)
chr3 (127-216)||(3182419-3182508)
chr3 (141-225)||(52597626-52597710)
chr3 (126-207)||(32703061-32703142)
chr3 (271-326)||(1810038-1810093)
chr3 (127-225)||(22232750-22232848)
chr3 (127-225)||(38462205-38462303)
chr3 (127-200)||(44374717-44374790)
chr3 (127-203)||(33307650-33307726)
chr3 (143-218)||(1395611-1395686)
chr3 (131-225)||(24420341-24420437)
chr3 (150-227)||(36783380-36783457)
chr3 (140-217)||(43079679-43079756)
chr3 (116-205)||(51278225-51278313)
chr3 (153-225)||(33405215-33405287)
chr3 (140-215)||(402600-402674)
chr3 (174-225)||(1217848-1217899)
chr3 (126-197)||(16790432-16790503)
chr3 (144-223)||(48397587-48397666)
chr3 (150-217)||(52618950-52619017)
chr3 (179-225)||(2201104-2201150)
chr3 (262-348)||(25182919-25183005)
chr3 (127-185)||(41028939-41028997)
chr3 (139-216)||(5436019-5436096)
chr3 (140-225)||(39602258-39602342)
chr3 (139-215)||(20192664-20192740)
chr3 (266-302)||(22232889-22232925)
chr3 (126-186)||(24268242-24268302)
chr3 (153-225)||(25447292-25447364)
chr3 (126-218)||(27792795-27792887)
chr3 (127-215)||(28779280-28779368)
chr3 (154-218)||(33882979-33883043)
chr3 (134-218)||(46407757-46407840)
[»] chr5 (32 HSPs)
chr5 (140-225)||(39105401-39105486)
chr5 (126-217)||(12425493-12425585)
chr5 (127-218)||(6738460-6738553)
chr5 (127-225)||(32172577-32172675)
chr5 (126-218)||(9202803-9202896)
chr5 (130-203)||(37063144-37063217)
chr5 (151-225)||(14295454-14295528)
chr5 (139-225)||(16889671-16889757)
chr5 (133-225)||(16945031-16945121)
chr5 (154-215)||(18875312-18875373)
chr5 (130-197)||(37611269-37611334)
chr5 (130-197)||(37787999-37788064)
chr5 (128-215)||(28586824-28586911)
chr5 (174-225)||(41957499-41957550)
chr5 (140-215)||(42569038-42569113)
chr5 (127-185)||(20982223-20982281)
chr5 (140-177)||(706400-706437)
chr5 (129-186)||(7096214-7096271)
chr5 (127-216)||(19177403-19177492)
chr5 (140-197)||(34112812-34112869)
chr5 (136-221)||(34160664-34160749)
chr5 (141-206)||(40848695-40848760)
chr5 (150-218)||(6582887-6582955)
chr5 (142-214)||(9927524-9927596)
chr5 (134-182)||(11054117-11054165)
chr5 (139-211)||(12595513-12595585)
chr5 (127-218)||(14331278-14331369)
chr5 (130-218)||(16863708-16863795)
chr5 (139-225)||(26209461-26209546)
chr5 (127-215)||(36539670-36539758)
chr5 (126-186)||(37618926-37618986)
chr5 (150-218)||(39594755-39594822)
[»] chr4 (29 HSPs)
chr4 (126-225)||(2980514-2980618)
chr4 (150-225)||(3175898-3175973)
chr4 (130-195)||(47970245-47970310)
chr4 (143-218)||(3155543-3155618)
chr4 (134-197)||(9680595-9680658)
chr4 (127-197)||(22684592-22684662)
chr4 (127-217)||(54325093-54325183)
chr4 (141-226)||(6364087-6364172)
chr4 (138-225)||(437480-437568)
chr4 (134-218)||(1706553-1706637)
chr4 (126-197)||(4191662-4191734)
chr4 (132-195)||(1404351-1404414)
chr4 (127-186)||(19422342-19422401)
chr4 (127-218)||(24091389-24091478)
chr4 (153-224)||(49085939-49086010)
chr4 (127-217)||(5219556-5219646)
chr4 (150-216)||(43824231-43824296)
chr4 (127-225)||(46415840-46415938)
chr4 (153-226)||(4071832-4071905)
chr4 (150-227)||(17884015-17884092)
chr4 (153-218)||(23459578-23459643)
chr4 (126-207)||(30024623-30024704)
chr4 (141-206)||(37733937-37734002)
chr4 (127-195)||(3249792-3249860)
chr4 (127-163)||(9843776-9843812)
chr4 (142-186)||(21193937-21193981)
chr4 (141-224)||(40174503-40174584)
chr4 (143-195)||(49803151-49803203)
chr4 (127-163)||(55994297-55994333)
[»] scaffold0590 (1 HSPs)
scaffold0590 (128-186)||(1161-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (128-186)||(2756-2814)
[»] scaffold0654 (1 HSPs)
scaffold0654 (127-215)||(6695-6783)
[»] scaffold0014 (1 HSPs)
scaffold0014 (127-215)||(116614-116702)


Alignment Details
Target: chr1 (Bit Score: 406; Significance: 0; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 17 - 446
Target Start/End: Complemental strand, 1255687 - 1255258
Alignment:
Q  17 cttgctactccttttatgatttttagacgagttgaccaggttagtacaatgccgtttctacctgcaaaatcaatgtaaaaattgttaagcacttatagca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  1255687 cttgctactccttttatgatttttagacgagttgaccaggttagtacaatgctgtttctacctggaaaatcaatgtaaaaattgttaagcacttatagca 1255588  T
Q  117 tataagcattttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1255587 tataagcattttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 1255488  T
Q  217 attagctatatattttgtgatgtttgtggaaataagctaagtaatatagtttaaggacatgtcataagttgtttctgtaaactctctctaatagtctcac 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1255487 attagctatatattttgtgatgtttgtggaaataagctaagtaatatagtttaaggacatgtcataagttgtttctgtaaactctctctaacagtctcac 1255388  T
Q  317 aactgattataatagataagctcaaataagtcgatccaaagaagacttgagccaagaataaaaattgataaatctaattattgcattgatttgttgagtc 416  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1255387 aagtgattataatagataacctcaaataagtcgatccaaagaagacttgagccaagaataaaaattgataaatctaattattgcattgatttgttgagtc 1255288  T
Q  417 atattcaaattctatctaaaactattatat 446  Q
    |||||||||||||||||||||| |||||||    
T  1255287 atattcaaattctatctaaaacaattatat 1255258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 7274085 - 7273998
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttt 214  Q
    |||||||||||||||||||||| | | ||||| ||||  |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  7274085 ttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgttt 7273998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 40304201 - 40304109
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||||| | |||||| ||| ||||||||| ||||  ||||||| |||| || ||| ||| |||||||| ||||||||||||||||||||    
T  40304201 tttatcatattattgcttaggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcat 40304109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 49516992 - 49517091
Alignment:
Q  126 tttatcatataaat-gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagcta 224  Q
    |||||||||||||| | || |||| ||| ||||||||||  ||||||| |||| |||||||||| |||||||  ||| |||||||||||||||| |||||    
T  49516992 tttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 23544773 - 23544687
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagtta-taagctgttttcattagctat 225  Q
    ||||||||| ||||||||||||| | ||||||| |||| |||||||||| |||||||| ||| || ||| |||||||||| ||||||    
T  23544773 gcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctat 23544687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 4549797 - 4549881
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||||||| ||||||||||||||  ||||||| |||| |||| ||||| | |||| ||||| || | |||||||||||    
T  4549797 ataaatgcttatgtacaagctatttctataacaaaagataaaataaagttaaattgtcttcaaacaagctacacgctgttttcat 4549881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 17628549 - 17628621
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||| |||||||| || | |||||||||| |||||||| || |||||||||||||| |||| ||||    
T  17628549 ctatttctatattaaaagataaagtaaagtcaaattgttttcatataaattataagctgtttttattaactat 17628621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 48748729 - 48748659
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||||||  |||||||||| ||||||||||||||  |||||||||||| |||| ||||| ||||||||    
T  48748729 tttatcatatatgtgcttatgtataagctatttctata-caaaagatgaaataaagttaaattgttttcata 48748659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 4622039 - 4622104
Alignment:
Q  149 gaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttt 214  Q
    |||| ||||||||||  ||||||| ||||||| ||||| |||||||||| ||| ||||||||||||    
T  4622039 gaagttatttctataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgttt 4622104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 6659627 - 6659684
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtca 184  Q
    ||||||||||| |||||||||| || |||||||||||| ||||||| |||||| ||||    
T  6659627 ttatcatataagtgcttatgtataaactatttctatagcaaaagataaaatgacgtca 6659684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 37842491 - 37842403
Alignment:
Q  137 aatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||| |||||| ||||||||||||||| |||||||||||| |||| ||| | | |||  | ||| |||||| ||||||||| ||||||    
T  37842491 aatgcctatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctat 37842403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 48282057 - 48282149
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagta-aaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||| |||||||||| ||||||||||||||  | |||||| |||| |||||||| | ||||| |  ||||| ||| ||||||||||    
T  48282057 ttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttcctttaagttttaaactgttttcat 48282149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 4548684 - 4548743
Alignment:
Q  166 aaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||| |||| |||||||| | |||| |||||||| ||||||||||||||| ||||||    
T  4548684 aaaagataaaataaagtcaaactgtttttatacaagtcataagctgttttcataagctat 4548743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 9656601 - 9656672
Alignment:
Q  154 tatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||| |||| || |||| |||| ||||| |||||||| ||| |||||||||| ||||| ||||||    
T  9656601 tatttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctat 9656672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 45107548 - 45107626
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataa 207  Q
    |||||||||| ||||||| || ||||||||||||||  |||| || |||| |||||||| | |||||||| |||||||||    
T  45107548 tatcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataagttataa 45107626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 51695613 - 51695543
Alignment:
Q  154 tatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||||||||||| |||| |||| ||||| ||||| || ||||||| || ||||||||| ||||||    
T  51695613 tatttctatagtaaaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctat 51695543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 870969 - 871039
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||||| |||||||||| || |||||| ||||  ||||||| |||| ||||||| || ||||||||    
T  870969 ttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcata 871039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 44032146 - 44032056
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    |||||||||||| || ||||||| ||||  ||||||||  ||||| | |||| |||||||||| |||||||| ||| ||||| || |||||    
T  44032146 tttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttc 44032056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 46499996 - 46499934
Alignment:
Q  131 catataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattctttt 193  Q
    ||||||| ||||||| || ||||||||||||||  ||||||| |||| |||||||||| ||||    
T  46499996 catataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttt 46499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 1662629 - 1662712
Alignment:
Q  266 tttaaggacatgtcataagttgtttctgtaaactctctctaatagtctcaca---actgattataatagataagctcaaataag 346  Q
    |||| ||||||||||||||||||||| |||| ||||| | ||||||||| ||   ||| ||  || ||||||||||||||||||    
T  1662629 tttatggacatgtcataagttgtttccgtaagctctcgcaaatagtctcgcatgtacttatgctagtagataagctcaaataag 1662712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 4576768 - 4576829
Alignment:
Q  166 aaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctatat 227  Q
    ||||||| |||| |||| ||| | ||||  ||||||||||||||||||||||| ||||||||    
T  4576768 aaaagattaaataaagttaaaatatttttgtacaagttataagctgttttcataagctatat 4576829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 16322799 - 16322864
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||| ||||  ||||||| ||||  ||||||| | |||||||| ||||||||||||||||||||    
T  16322799 ctatttttatatcaaaagataaaatatagtcaaactattttcatagaagttataagctgttttcat 16322864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 24502836 - 24502791
Alignment:
Q  272 gacatgtcataagttgtttctgtaaactctctctaatagtctcaca 317  Q
    ||||||||||||||||||||||||| ||||||| ||| | ||||||    
T  24502836 gacatgtcataagttgtttctgtaagctctctcaaattgcctcaca 24502791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 26179534 - 26179579
Alignment:
Q  273 acatgtcataagttgtttctgtaaactctctctaatagtctcacaa 318  Q
    |||||||||||||||||||  ||||||||| |||| ||||||||||    
T  26179534 acatgtcataagttgtttccttaaactctccctaacagtctcacaa 26179579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 17577890 - 17577826
Alignment:
Q  151 agctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    |||||||||| || | |||||||||||||| | ||||| ||||  |||||| |||||||||||||    
T  17577890 agctatttctgtaatgaaagatgaaatgaatttaaattgttttagtacaagctataagctgtttt 17577826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 33186097 - 33186005
Alignment:
Q  133 tataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| | ||||| |||||||||||||   | ||||| |||| | ||| |||| |||| |||||||||||||| |||||| || ||||||    
T  33186097 tataaatgttcatgtataagctatttctattacagaagataaaataaggtcgaattgtttttatacaagttataagttgtttttataagctat 33186005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 50319230 - 50319286
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||| ||||||||||||||  ||||||| |||| ||||||| || ||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 52013821 - 52013857
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctata 163  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  52013821 ttatcatgtaaatgcttatgtataagctatttctata 52013857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 29274375 - 29274284
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||| |||| |||||||||| |||||||| ||| ||||| ||||||||||    
T  29274375 ttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcat 29274284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 25099964 - 25100065
Alignment:
Q  125 ttttatcatataaatgcttatgtag-aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagct 223  Q
    ||||||||||| | ||||||||||  |||||||||||| || |||| |||||||  ||||||||| |||||||| |||||||||| ||||||||| ||||    
T  25099964 ttttatcatatcagtgcttatgtatcaagctatttctaaagcaaaatatgaaatagagtcaaattgttttcatagaagttataagttgttttcataagct 25100063  T
Q  224 at 225  Q
    ||    
T  25100064 at 25100065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 9732399 - 9732490
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    |||| ||||||| |||||||| | |||||||||||||| |||| ||| |||| |||||||||| ||||||| |||| |||||| ||||||||    
T  9732399 tttaccatataagtgcttatgcataagctatttctatattaaaggataaaattaagtcaaattgttttcatgcaaggtataagttgttttca 9732490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 10154146 - 10154228
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagct 210  Q
    |||||||||| ||||| |||| ||||| ||||||||| ||||||| |||| |||||||| | |||||||| ||||||||||||    
T  10154146 tatcatataagtgcttctgtacaagctgtttctatagaaaaagataaaataaagtcaaactgttttcatataagttataagct 10154228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 14492233 - 14492317
Alignment:
Q  133 tataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||| ||||| |||| || |||||| ||||  ||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||    
T  14492233 tataagtgcttttgtataacctattt-tataccaaaagataaaatgaagtcaaattgttttgatacaagctataagctgttttcat 14492317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 24476540 - 24476624
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| ||||||||||||||| ||||||| ||||| ||| ||||| |||||||| |||  |||||| ||||| || ||||||    
T  24476540 cttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagcgataagcagttttgataagctat 24476624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 2514626 - 2514685
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    ||||||| ||| |||||||||| |||||||||||||| |||||||| |||| ||||||||    
T  2514626 ttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaa 2514685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 9093689 - 9093606
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagct 223  Q
    ||||||| | ||||||||||||||  ||||||| |||| |||| ||||| ||||| || ||| |||||||||||||||| ||||    
T  9093689 gcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 10616932 - 10616886
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatg 173  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||    
T  10616932 ttatcatataaatacttatgtataagctatttctataataaaagatg 10616886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 5550059 - 5550147
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||| |||||||||| |   |||||| ||| ||| |||| | || |||||||||| |||||||| ||| ||||||||||||||||    
T  5550059 tcatataagtgcttatgtatatagtatttcgataataagagataacataaagtcaaattgttttcatataagctataagctgttttcat 5550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 10400193 - 10400284
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagat-gaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||  |||| |||||||||| || ||||| ||| |||||| ||| |||||    
T  10400193 ttatcatataaatgtttatgtataagctattt-tataataaaagataaaaataaagtcaaattgttatcatataagctataagatgtcttcat 10400284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 24782006 - 24782066
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagct 210  Q
    ||||||||||||||  ||||||| |||| || ||||||| |||||||| ||||||||||||    
T  24782006 aagctatttctataacaaaagataaaatcaaatcaaattgttttcatataagttataagct 24782066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 33787876 - 33787800
Alignment:
Q  142 ttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||| || |||||||||||  |||| || |||  ||||||||||  ||||||| ||||||||||||||||||||    
T  33787876 ttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcat 33787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 8420206 - 8420129
Alignment:
Q  271 ggacatgtcataagttgtttctgtaaactctctctaatagtctcacaactgattat---aatagataagctcaaataa 345  Q
    |||||||||||||| | ||||| ||| ||||| |||| |||||||||| || ||||   |||||||||||||||||||    
T  8420206 ggacatgtcataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagataagctcaaataa 8420129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 32386710 - 32386615
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattag 221  Q
    |||||||||||| |||||||||| |  |||||||  ||  ||||||| |||| | |||||||| |||||||| ||| |||| | ||||||||||||    
T  32386710 tttatcatataagtgcttatgtatagactatttcactaagaaaagataaaataaggtcaaattgttttcatataaggtatacgttgttttcattag 32386615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 323753 - 323823
Alignment:
Q  145 tgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    |||| |||||||||||||| |||||||| |||| || ||||| | |||||||| ||||||| |||| ||||    
T  323753 tgtataagctatttctatattaaaagataaaataaattcaaactgttttcatataagttatgagctatttt 323823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 3217336 - 3217266
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||||| |||||||||| ||||||||| | ||  | ||||| |||| |||||||||| ||||||||    
T  3217336 ttatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcata 3217266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 10032495 - 10032593
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||||| ||||||| ||||||||| ||||  || || |||||| ||| |||| |  ||||||| ||| |||||||||| || || ||||||    
T  10032495 ttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataagctgtctttataagctat 10032593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 10452505 - 10452419
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttt 214  Q
    |||||||| | |||||||||| ||||||||||||||  |||| || |||| || ||||| | |||||||| ||| |||||| |||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgttt 10452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 29269820 - 29269886
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattctttt 193  Q
    ||||||||||||||||| |||| || |||||||||||  | ||||| |||| |||||||||| ||||    
T  29269820 ttatcatataaatgcttgtgtataaactatttctataacagaagataaaataaagtcaaattgtttt 29269886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 1810445 - 1810361
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    |||||||||| |||||||| | ||||||||||||||  ||||||| |||| ||   | ||| |||||||| ||| |||||||||||||    
T  1810445 tatcatataagtgcttatgcaaaagctatttctataacaaaagataaaataaa---atattgttttcatataagctataagctgtttt 1810361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 18264305 - 18264342
Alignment:
Q  179 aagtcaaattcttttcatacaagttataagctgttttc 216  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  18264305 aagtcaaattgttttcatacaagttataagctattttc 18264342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 27693446 - 27693401
Alignment:
Q  273 acatgtcataagttgtttctgtaaactctctctaatagtctcacaa 318  Q
    |||||||||||||||||||  |||| |||||| |||||||||||||    
T  27693446 acatgtcataagttgtttccataaattctctcaaatagtctcacaa 27693401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 430508 - 430456
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattctttt 193  Q
    |||||||| ||||||||||||||  |||||||||||| |||| ||||| ||||    
T  430508 cttatgtataagctatttctatataaaaagatgaaataaagttaaattatttt 430456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 741015 - 740983
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctattt 158  Q
    ||||||||||||||||||||||| |||||||||    
T  741015 tttatcatataaatgcttatgtataagctattt 740983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 4247781 - 4247694
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttt 214  Q
    |||||||| ||| |||||||||| ||||||||||||||  ||||||| |||  || ||||| | || ||||| |||| |||||||||||    
T  4247781 tttatcatgtaagtgcttatgtataagctatttctataacaaaagat-aaaaaaattcaaactgttgtcataaaagtaataagctgttt 4247694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 9027501 - 9027585
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctg 211  Q
    |||| |||||| ||||||| || |||||||||||| | || ||||| |||| |||||||| | |||| ||| |||| ||||||||    
T  9027501 ttattatataagtgcttatctataagctatttctacaatagaagataaaataaagtcaaactgttttaatataagtaataagctg 9027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 10616846 - 10616798
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagt 182  Q
    ||||| ||||||||| || |||||| ||||||||||||| |||||||||    
T  10616846 ataaaagcttatgtataatctatttttatagtaaaagataaaatgaagt 10616798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 31668831 - 31668795
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctata 163  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  31668831 ttatcatataagtgcttatgtataagctatttctata 31668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 32386268 - 32386213
Alignment:
Q  101 ttaagcacttatagcatataagcattttatcatataaatgcttatgtagaagctatttc 159  Q
    |||||||||||||| ||| |||   |||||||||||| |||||||||| ||||||||||    
T  32386268 ttaagcacttatagtataaaag---tttatcatataagtgcttatgtataagctatttc 32386213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 33068707 - 33068619
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    |||||| ||||||||||||||| ||| ||||||||||  ||||||| |||| |  ||||| | |||||| | ||| |||||||| ||||    
T  33068707 ttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataagatataagctatttt 33068619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 13652138 - 13652237
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| ||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||  |||||| || ||||||    
T  13652138 tttatcatctaagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctat 13652237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 13710781 - 13710880
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| ||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||  |||||| || ||||||    
T  13710781 tttatcatctaagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctat 13710880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 29699177 - 29699268
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    ||||||||||||||||||||||| ||| ||||||||||  ||||||| |||| |||||||| | || ||||  |||||||||||||||||||    
T  29699177 tttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttca 29699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 1470985 - 1470911
Alignment:
Q  144 atgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||| |||||||||||||| |||||||| |||| ||||||||||  ||||||| ||| ||||||||||||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcat 1470911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 10727123 - 10727209
Alignment:
Q  129 atcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||||| |||||||| | ||||||||||||||| |||||||||||| || ||||| | |||||| | |||||||||| ||||||    
T  10727123 atcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattcaaagtgttttcacataagttataagttgtttt 10727209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 28769485 - 28769387
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||||||||||||| |||||||| |||||  |||  || |||| |||||||| | ||||| || ||| |||||||||||||||| ||||||    
T  28769485 ttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctat 28769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 10114421 - 10114513
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctatat 227  Q
    |||| |||||||||| ||||||||||||||| ||||||| |||| ||||  |||| ||||  || ||| |||||||||||||||||||||||||    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaat-aagttgaattgttttggtataagctataagctgttttcattagctatat 10114513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 4558737 - 4558820
Alignment:
Q  142 ttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||| |||||||||||||| |||||||| |||| |||| ||||| |||||||| | | |||||||||||| ||| ||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctat 4558820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 12361130 - 12361207
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||| || ||| ||||||||||   |||||| ||||||||||||||| |||||||| ||| ||||||||||||||||    
T  12361130 cttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcat 12361207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 42597339 - 42597416
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||| ||||||||||||||  ||||||| |||| |||| ||||| ||||||| |||| |||||| |||||||||    
T  42597339 cttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcat 42597416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 5071112 - 5071022
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||| || |||||||| ||| | |||||||||||||| || |||| |||||||| | |||||||| || || |||| |||||||||    
T  5071112 tatcatatacattcttatgtataagttgtttctatagtaaaatataaaataaagtcaaacttttttcatataacttgtaagatgttttcat 5071022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 14482126 - 14482192
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattctttt 193  Q
    ||||||||||| |||||||||| || |||||||||||  ||||||| |||| |||||||||| ||||    
T  14482126 ttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 16211015 - 16210942
Alignment:
Q  144 atgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    ||||| ||||||||||||||||||| ||| |||| |||| | ||| |||||||| ||| |||||| ||||||||    
T  16211015 atgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataagttgttttca 16210942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 31705025 - 31705105
Alignment:
Q  144 atgtagaagctatttctatagtaaaagatgaaatgaagtcaaatt-cttttcatacaagttataagctgttttcattagct 223  Q
    ||||| ||||||||||| || |||||||| |||| | |||||||| | ||||||| ||| |||||||||||||||| ||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataagctgttttcataagct 31705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 35535007 - 35534948
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    ||||||||||| ||||||| || |||||||||||||| |||||| | |||| ||||||||    
T  35535007 ttatcatataagtgcttatatataagctatttctataataaaagttaaaataaagtcaaa 35534948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 38874569 - 38874668
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||| ||||| || ||||||| ||| | ||||| ||   |||||| ||||  |||||||||||||||||| ||| | |||||||||||||| ||||||    
T  38874569 tttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 38874668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 348
Target Start/End: Original strand, 7008656 - 7008739
Alignment:
Q  267 ttaaggacatgtcataagttgtttctgtaaactctctctaatagtctcacaactgattat---aatagataagctcaaataagtc 348  Q
    |||||||||||||||| ||||||||| ||| ||||||||||  ||||||||| || ||||   | ||||||| ||||||||||||    
T  7008656 ttaaggacatgtcataggttgtttctataagctctctctaa-cgtctcacaagtgcttatgccagtagataaactcaaataagtc 7008739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 30013143 - 30013240
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||| |||||| |||||||||  ||||||||| ||||  ||||| | |||| |||||||| | ||| |||| ||| |||||||||||||||| ||||||    
T  30013143 ttattatataagtgcttatgtttaagctattt-tataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctat 30013240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 31915400 - 31915334
Alignment:
Q  142 ttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataag 208  Q
    ||||||| ||||||| ||||||  |||||||  ||| |||||||||| |||||||||||| ||||||    
T  31915400 ttatgtataagctatatctataacaaaagatagaataaagtcaaattgttttcatacaaggtataag 31915334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 12972757 - 12972830
Alignment:
Q  101 ttaagcacttatagcatataagcattttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaat 177  Q
    |||||| |||||||||||  ||||||| ||||||||| |||||||||| |||||||||| |||  | ||||||||||    
T  12972757 ttaagcgcttatagcata--agcattt-atcatataagtgcttatgtataagctatttcaataacagaagatgaaat 12972830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 35298633 - 35298592
Alignment:
Q  118 ataagcattttatcatataaatgcttatgtagaagctatttc 159  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  35298633 ataatcattttatcatataagtgcttatgtataagctatttc 35298592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 39551356 - 39551259
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagct 223  Q
    |||||||||||| || ||||||| || ||| ||| ||| |||||||| |||| |||  ||| | | |||||||||| |||||| ||||||||| ||||    
T  39551356 tttatcatataagtgtttatgtataacctacttccataataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcataagct 39551259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 42764189 - 42764282
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatg-aaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||| |||||| | |||||||| ||||||||| ||||  |||||||  ||||||| | ||| | |||||||||||| |||||||| |||||||    
T  42764189 tttataatataagtacttatgtacaagctatttttataacaaaagatttaaatgaaattaaactgttttcatacaagctataagctattttcat 42764282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 4510991 - 4511043
Alignment:
Q  166 aaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||| |||  |||||||||| || ||||| ||||||||||||||||||||    
T  4510991 aaaagattaaaaaaagtcaaatttttctcatataagttataagctgttttcat 4511043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 7026654 - 7026738
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagct 210  Q
    |||||||||||| |||||||| | |||||| |  ||||  ||||||| |||| |||| ||||| |||||||| ||| ||||||||    
T  7026654 tttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataaggtataagct 7026738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 7514516 - 7514600
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| ||||||||||||||| ||||  | |||| | ||  |||| |||||||| ||| || ||||||||||||| ||||||    
T  7514516 cttatgtataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctat 7514600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 9699940 - 9700016
Alignment:
Q  142 ttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||| |||||||||| |||  ||||| | |||| | |||||||| |||||| | || |||||||||||||||||    
T  9699940 ttatgtataagctatttcgataacaaaagttaaaataaggtcaaattgttttcaaataaattataagctgttttcat 9700016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 10079206 - 10079150
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    ||||||| |||||||| || | |||||||||||  |||||||| |||||||||||||    
T  10079206 tcatatacatgcttatttataggctatttctatgataaaagataaaatgaagtcaaa 10079150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 11795026 - 11795114
Alignment:
Q  137 aatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||| ||||| |||||||   |||| ||  ||| |||||| | | |||||||| ||||||||||||| |||||| ||||||    
T  11795026 aatgcttatgtataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctat 11795114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 28340985 - 28340892
Alignment:
Q  132 atataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||| ||||||| || | ||||||| |||| |||||||||||||||||||||||| || ||||| ||| |||||||||||||||| ||||||    
T  28340985 atataagtgcttatctatatgctatttttataataaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctat 28340892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 35536031 - 35536114
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagct 210  Q
    |||||||||||| ||||||||| ||||||||||||||  | ||||| |||| |||||||||| |||||||| ||||||||||||    
T  35536031 ttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataagct 35536114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 29574748 - 29574656
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||||||||||||||| ||||||||| |||   |||||||||||| |||||||   |||||||||||| ||| ||| |||||||||    
T  29574748 tttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaagaacttttcatacaacttaaaagttgttttcat 29574656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 27548186 - 27548285
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||| ||||| ||||||| || ||||||||||  ||| ||||||| |||| ||||| |||| |||||||  ||| |||||||||||||||| ||||||    
T  27548186 tttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctat 27548285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 45593866 - 45593788
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagtta 204  Q
    ||||||||||||||||||||||| ||||||||||| ||  |||| || |||| |||||||| | |||||||| ||||||    
T  45593866 tttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataagtta 45593788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 40689107 - 40689034
Alignment:
Q  152 gctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||||| ||||||| |||| |||| ||||| |||||||| ||| |||||||||| ||||| ||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctat 40689034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 3802267 - 3802184
Alignment:
Q  145 tgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctatata 228  Q
    |||| |||||||||||||| |||||| | |||| |||||||||  |||||||| || |||||||||||||| |  |||||||||    
T  3802267 tgtataagctatttctataataaaaggtaaaataaagtcaaatcgttttcatataaattataagctgtttttaaaagctatata 3802184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 7244625 - 7244696
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||||||| |||||||||| ||||||||||||||  ||||||| |||  |||||||| | ||||||||    
T  7244625 tttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 27121732 - 27121662
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||||| | |||||||| ||| |||||||||| |||| ||| |||| |||||||||| ||||||||    
T  27121732 ttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcata 27121662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 27492720 - 27492817
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||| | |||||||| || |||||||||||  ||||| | |||| || ||||| | |||||||| |||| ||||| ||||||||| ||||||    
T  27492720 tatcatataagttcttatgtataaactatttctataacaaaagttcaaataaaatcaaacttttttcatataagtaataagatgttttcataagctat 27492817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 3501102 - 3501014
Alignment:
Q  137 aatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||| |||||| || |||| |||||||| |||| |||||||||  |||||||| ||  |||||| ||| ||||||| ||||    
T  3501102 aatgcttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttgtattcattaactat 3501014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 24973870 - 24973938
Alignment:
Q  129 atcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||| |||||||||| ||||||||||||||  ||||||| |||| || ||||||| ||| ||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccata 24973938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 27481441 - 27481342
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||| |||||| || ||||||| ||||||||||||||  ||| ||| ||| ||||||||| | ||| |||| ||| |||||| | ||||||| ||||||    
T  27481441 tttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctat 27481342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 30456572 - 30456505
Alignment:
Q  151 agctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||| |  ||||||| |||| |||||||||| |||||||| ||||||||||  ||||||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcat 30456505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 31341118 - 31341177
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    ||||||| |||||||||||||| ||||||||| ||||  ||||||| |||| ||||||||    
T  31341118 ttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaaa 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 49060464 - 49060555
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||| |  ||||||| ||||||||||||||  |||| || |||| |||||||||| |||| ||| ||| |||||| | |||||||    
T  49060464 ttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcat 49060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 3610883 - 3610797
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    |||||||| |||||||||| |||||||||||| |  ||||||| |||||||| |||| | ||||  || ||| |||||| |||||||    
T  3610883 tcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttc 3610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 5373149 - 5373239
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    ||||||| ||| |||||||||| | ||||||||||||  ||||||| |||| ||||| ||   |||| ||| |||||||||| ||||||||    
T  5373149 ttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttgttttca 5373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 22759085 - 22759208
Alignment:
Q  101 ttaagcacttatagcatataagcatttt-atcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcataca 199  Q
    ||||||||||||||  ||||| |||||| |||||||||  | ||||||  ||||||||| ||||  ||||||| |||| |||  ||||| |||||||| |    
T  22759085 ttaagcacttatag--tataaacatttttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatata 22759182  T
Q  200 agttataagctgttttcattagctat 225  Q
    || || |||||| |||||| ||||||    
T  22759183 agctaaaagctgatttcataagctat 22759208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 28165027 - 28165113
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||| ||| | ||||||||  ||||||| ||||||||||||||| |||| ||| ||| ||||| |||| || || ||||||    
T  28165027 tgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctat 28165113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 45813314 - 45813236
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    ||||||| || ||||||||||||||  ||||||| |||| ||||||| || |||||||| ||  |||||| ||||||||    
T  45813314 tgcttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 991993 - 992094
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||| |||||| ||| ||| | ||||||||  |||| || |||| ||| |||| | |||||||| ||| ||||| || ||||||| ||||||    
T  991993 tttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttttttcataagctat 992092  T
Q  226 at 227  Q
    ||    
T  992093 at 992094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 3241366 - 3241435
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||||| ||||||| |||||||||||||||||  |||| |  |||| |||||||| | ||||||||    
T  3241366 tatcatataagtgcttatatagaagctatttctataacaaaataaaaaataaagtcaaactgttttcata 3241435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 6824858 - 6824931
Alignment:
Q  143 tatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    |||||| ||||||||||||||  |||||||  ||  |||| ||||| ||||  |||||||||||||||||||||    
T  6824858 tatgtataagctatttctataacaaaagatagaacaaagttaaattgttttagtacaagttataagctgttttc 6824931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 18350820 - 18350755
Alignment:
Q  160 tatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||| |||||| ||||| |||  ||||| ||||| || |||||||||||||||||||| ||||||    
T  18350820 tatagcaaaagacgaaattaagctaaattgttttcgtataagttataagctgttttcataagctat 18350755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 46213728 - 46213797
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||||| |||||||||| ||||||||||||||  |||| || |||| ||||| ||  |||||||||    
T  46213728 tatcatataagtgcttatgtaaaagctatttctataacaaaatataaaataaagtcgaaaccttttcata 46213797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 33894549 - 33894616
Alignment:
Q  129 atcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||| ||| |||||||||| ||||||||||||||  ||||||| |||| |||||||| | ||||||||    
T  33894549 atcatgtaagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcata 33894616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 18066069 - 18066150
Alignment:
Q  144 atgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||||||||| ||||||| ||||||| |||| ||||| |||||||| ||| |||||||||||||||| ||||||    
T  18066069 atgtagaagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctat 18066150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 3673734 - 3673829
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| ||||||||||  || ||||||||||  |||| || |||| |||| ||||| |||||||| |||||||||| | ||||||||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctat 3673829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 13866824 - 13866911
Alignment:
Q  138 atgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||| || |||||||||||| ||||||| |||| |||||||| | |||| ||| ||  |||||||| ||||||||||||||    
T  13866824 atgcttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataagctcttttcattagctat 13866911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 17952847 - 17952749
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||  |||||| || ||||||||||||||  ||||||| |||| |||||||| | |||||||| ||| || ||| ||||||||| ||||||    
T  17952847 ttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctat 17952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 37053518 - 37053616
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||| |||||||||| |  |||||||||||  | || || |||| |||||||| | |||||||| |||||||||| | ||||||||||||||    
T  37053518 ttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcattagctat 37053616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 2416249 - 2416338
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctatata 228  Q
    |||||||||| ||| ||||||| ||| ||||||| ||||||||| ||||| |||| ||| ||| ||||||||||||| || || ||||||    
T  2416249 tgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttttataagttatata 2416338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 3102616 - 3102708
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||||||| |||||||||| ||||||||| ||||| |||| || |||| |||||||| | |||| ||| ||  ||| ||||||||||||    
T  3102616 tttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctattagctgttttcat 3102708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 15377701 - 15377787
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||| || |||||| |||||||  ||| ||| |||| |||| | ||| |||||||| |||||||||||||||||||| ||||||    
T  15377701 tgcttatttataagctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataagctat 15377787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 11344425 - 11344340
Alignment:
Q  132 atataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    |||||| |||||||| | ||| ||||||||||  ||||||| |||  |||||||||| |||||||||||| |||||  ||||||||    
T  11344425 atataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 25609727 - 25609808
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    |||| |||||||||| ||||||||||||||  ||||||| |||| ||||||| || ||||| || ||| |||||| ||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgtttt 25609808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 43530266 - 43530198
Alignment:
Q  118 ataagcattttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    ||||||||||||||||||||   |||||| | ||||||||||||||| | ||||| |||| ||||||||    
T  43530266 ataagcattttatcatataagcacttatgaataagctatttctataggacaagataaaataaagtcaaa 43530198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 33944530 - 33944621
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcatt 219  Q
    ||||||||||||| ||||  | |||||||||||  | ||||| || |||| |||||||||| |||||||| ||| |||||  ||||||||||    
T  33944530 tatcatataaatgtttataaataagctatttcttgaataaaatataaaataaagtcaaattgttttcatataagctataaattgttttcatt 33944621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 42817495 - 42817424
Alignment:
Q  154 tatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||  ||||||| ||||||||||||  | |||||||| |||| |||| |||||||||| ||||||    
T  42817495 tatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctat 42817424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 5133708 - 5133786
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    |||||||||| ||||||||||||||  ||||||| |||| |||  ||| | |||| ||| ||| |||||||||||||||    
T  5133708 tgcttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttca 5133786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 16946968 - 16947034
Alignment:
Q  129 atcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca 195  Q
    ||||||||||| |||||||| ||||||||| | ||  ||||||| |||| |||||||||| ||||||    
T  16946968 atcatataaattcttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttca 16947034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 17017633 - 17017699
Alignment:
Q  129 atcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca 195  Q
    ||||||||||| |||||||| ||||||||| | ||  ||||||| |||| |||||||||| ||||||    
T  17017633 atcatataaattcttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttca 17017699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 32098446 - 32098384
Alignment:
Q  135 taaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||||| || ||||||||||||||  ||||||| |||| |||||||| | ||||||||    
T  32098446 taaatgcttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttcata 32098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 43985270 - 43985358
Alignment:
Q  271 ggacatgtcataagttgtttctgtaaactctctctaatagtctcacaactgattat---aatagataagctcaaataagtcgatccaaa 356  Q
    ||||||||||||||||||||| |||| ||||||| || ||| | |||| || ||||   | ||||||| || |||||||||||||||||    
T  43985270 ggacatgtcataagttgtttcagtaatctctctcaaacagttttacaagtgtttatgtcagtagataaacttaaataagtcgatccaaa 43985358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 1742152 - 1742087
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||||||  |||| || ||||||||||||| |||||  ||| ||| ||||||||||||||||    
T  1742152 ctatttctataacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcat 1742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 9395083 - 9395148
Alignment:
Q  156 tttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattag 221  Q
    ||||||||| ||||||| |||| |||  ||||| |||||||| ||  |||||||||||||||||||    
T  9395083 tttctatagaaaaagataaaataaagctaaattgttttcatataatctataagctgttttcattag 9395148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 14299771 - 14299687
Alignment:
Q  133 tataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa-ttcttttcatacaagttataagctgttttca 217  Q
    |||||||||||||||| || |||||||||||||  || || |||| |||||||| || |||||||| ||||||| || ||||||||    
T  14299771 tataaatgcttatgtataaactatttctatagt-gaacatcaaataaagtcaaagttgttttcatataagttatgagttgttttca 14299687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 35755642 - 35755557
Alignment:
Q  133 tataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||| || ||||||| |||||||||||||| | ||| |  |||| |||||||||| |||||||  ||| |||||| |||||||||    
T  35755642 tataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttcat 35755557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 1646945 - 1647029
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||| |||||||||| ||||||||| ||||| ||| ||| |||| ||||  |||| ||||  || ||| ||||||||||||||||    
T  1646945 ataagtgcttatgtacaagctatttgtatagcaaacgataaaattaagttcaattgtttttttataagctataagctgttttcat 1647029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 4026748 - 4026832
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||| ||||||| || ||||||||| ||||| ||||||| |||| |||| ||||| ||||   | || |||||||||||||||||    
T  4026748 ataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttttgcataaattataagctgttttcat 4026832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 11393513 - 11393441
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattc-ttttcata 197  Q
    |||||||||||| ||||||| || ||||||||||||||  |||||||  ||| || |||||||| ||||||||    
T  11393513 tttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaaattcgttttcata 11393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 11393824 - 11393756
Alignment:
Q  101 ttaagcacttatagcatataagcattttatcatataaatgcttatgtagaagctatttctatagtaaaagat 172  Q
    |||||||||||||||||| |  ||||| ||||| ||| |||||||||| ||||||||||||||  |||||||    
T  11393824 ttaagcacttatagcataaa--cattt-atcatttaagtgcttatgtataagctatttctataccaaaagat 11393756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 11410174 - 11410102
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattc-ttttcata 197  Q
    |||||||||||| ||||||| || ||||||||||||||  |||||||  ||| || |||||||| ||||||||    
T  11410174 tttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaaattcgttttcata 11410102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 11410485 - 11410417
Alignment:
Q  101 ttaagcacttatagcatataagcattttatcatataaatgcttatgtagaagctatttctatagtaaaagat 172  Q
    |||||||||||||||||| |  ||||| ||||| ||| |||||||||| ||||||||||||||  |||||||    
T  11410485 ttaagcacttatagcataaa--cattt-atcatttaagtgcttatgtataagctatttctataccaaaagat 11410417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 31461363 - 31461423
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaatt 188  Q
    |||||||||| || |||| || ||||||||||||||  ||||||| |||| ||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaatt 31461423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 35459833 - 35459901
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttc 194  Q
    |||||||||||| || || |||| ||||||||| ||||  ||||||| |||| |||||||||| |||||    
T  35459833 tttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttc 35459901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 3182508 - 3182419
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    ||||||| ||| || ||||||| ||| || |||||||| ||||||| |||| |||||||||| ||||||||||||||||| |||||||||    
T  3182508 ttatcatttaagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttcatacaagttataggctgttttc 3182419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 52597626 - 52597710
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| |||||||||| |||||||||||| || |||||| | ||| |||||||| |||||||||| ||||||||| ||||||    
T  52597626 cttatgtataagctatttccatagtaaaagataaagtgaagtaacattgttttcatataagttataagatgttttcataagctat 52597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 32703061 - 32703142
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataa 207  Q
    ||||||||||||||| ||||||| |||||||||||||  |||||||| |||| || ||||||| |||||||| ||| |||||    
T  32703061 tttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 1810038 - 1810093
Alignment:
Q  271 ggacatgtcataagttgtttctgtaaactctctctaatagtctcacaactgattat 326  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||    
T  1810038 ggacatgtcataagttgtttccgtaagctctctcaaatagtctcacaagtgattat 1810093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 22232750 - 22232848
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||||||| ||||| ||||||||| ||||  ||| ||| |||| |||||||| | |||||||| ||||  |||||| ||||||| ||||||    
T  22232750 ttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctat 22232848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 38462205 - 38462303
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||| || |||| || ||||||||||||||  ||||||| |||| |||||||| | |||||||| | | ||||| |||||||||| ||||||    
T  38462205 ttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctat 38462303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 44374790 - 44374717
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaa 200  Q
    ||||||||||| |||||||||| ||||||| ||| ||  ||||||| |||| |||||||||| |||||||||||    
T  44374790 ttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcatacaa 44374717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 33307726 - 33307650
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagtt 203  Q
    ||||||||||| |||||||||| ||||||||||  ||  |||| ||||||| |||||||||| |||||||| |||||    
T  33307726 ttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataagtt 33307650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 1395611 - 1395686
Alignment:
Q  143 tatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||| ||||||||||||||  ||||||| |||| |||||||||| |||||||| ||| ||| | ||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcat 1395686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 24420437 - 24420341
Alignment:
Q  131 catataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaag--tcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||||| ||| |||| |||||||||  ||| ||| || | | |  ||||||| |  |||||||||||||||||||||||||||||||||    
T  24420437 catataaatgcttacgtataagcaatttctataacaaaggataaactaatgattcaaattgtcctcatacaagttataagctgttttcattagctat 24420341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 36783457 - 36783380
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctatat 227  Q
    ||||||||||||||  ||||||| |||| |||| ||||| |||||||| ||  ||| |||||||||||| ||||||||    
T  36783457 aagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatat 36783380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 43079679 - 43079756
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    ||||||||  ||||||||||||||  |||| || ||| ||||| ||||  |||||||| |||||||||||||||||||    
T  43079679 gcttatgtgtaagctatttctataacaaaaaataaaaggaagttaaatcgttttcatataagttataagctgttttca 43079756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 51278313 - 51278225
Alignment:
Q  116 atataagcattttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttat 205  Q
    |||||||||||| ||||||||| |||| ||||| ||||||||||||||  |||| || |||| |||||||| | |||||||  |||||||    
T  51278313 atataagcattt-atcatataattgctaatgtataagctatttctataacaaaatattaaataaagtcaaactgttttcatttaagttat 51278225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 33405287 - 33405215
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||| ||||| | |||| |||| || || |||||||| ||| |||||||||||||||| ||||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctat 33405215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 402674 - 402600
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||||| ||||||||||||||| ||||||| || | || | ||||| ||||| || |||||||||||||||||    
T  402674 gcttatgtataagctatttctatagaaaaagat-aattaaatttaaattgttttcgtataagttataagctgtttt 402600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 1217899 - 1217848
Alignment:
Q  174 aaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||| ||||| |||||||  |||||||||||||||||||| ||||||    
T  1217899 aaatgaagttaaattgttttcatgtaagttataagctgttttcataagctat 1217848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 16790503 - 16790432
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||||||| |||||||||| ||||||||| ||||  || |||| |||| || ||||||| ||||||||    
T  16790503 tttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 48397587 - 48397666
Alignment:
Q  144 atgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagct 223  Q
    ||||| ||| ||||| |||| |||||||| |||| |||||||||| |||| ||  ||| |||||| ||||||||||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttcattagct 48397666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 52618950 - 52619017
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    |||||||||||| |  ||| ||| |||| |||| ||||| |||||||| |||||||||||||||||||    
T  52618950 aagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttca 52619017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 2201104 - 2201150
Alignment:
Q  179 aagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| | |||||||| ||| |||||||||||||||||||||||    
T  2201104 aagtcaaactgttttcatataagctataagctgttttcattagctat 2201150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 25183005 - 25182919
Alignment:
Q  262 atagtttaaggacatgtcataagttgtttctgtaaactctctctaatagtctcacaactgattataatagataagctcaaataagtc 348  Q
    |||| ||| ||| ||||||||||||||||   ||| ||||||| || |||||||||| |  ||||| ||| ||||||||||||||||    
T  25183005 atagcttatggatatgtcataagttgttttcataagctctctcaaacagtctcacaagttcttatagtaggtaagctcaaataagtc 25182919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 41028997 - 41028939
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaa 185  Q
    ||||||||||| |||||||||| ||||||||||||||  ||||||  |||| |||||||    
T  41028997 ttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 5436019 - 5436096
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    |||| ||||| ||||||||||||||| |||||||  |||||||| |||||  |||  |||||||| |||||| |||||    
T  5436019 tgctcatgtataagctatttctatagaaaaagattgaatgaagttaaattgattttgtacaagttttaagcttttttc 5436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 39602342 - 39602258
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||| | ||||||||||||||| ||||||| | || |||| ||||| ||  | || |||||||||||||||||||| ||||||    
T  39602342 gcttatgcataagctatttctatagaaaaagataacataaagttaaattgttg-cgtataagttataagctgttttcataagctat 39602258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 20192740 - 20192664
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    |||||||||| ||||||||| ||||  ||||||| |||| ||||||||   |||||||| ||  |||||||||||||    
T  20192740 tgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 22232889 - 22232925
Alignment:
Q  266 tttaaggacatgtcataagttgtttctgtaaactctc 302  Q
    |||| |||||||||||||||||||||| |||||||||    
T  22232889 tttatggacatgtcataagttgtttctataaactctc 22232925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 24268302 - 24268242
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    ||||||||| || |||||||||| || |||||||||||| ||||| | |||| ||||||||    
T  24268302 tttatcatacaagtgcttatgtataaactatttctatagcaaaagttaaaatcaagtcaaa 24268242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 25447364 - 25447292
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||||||||||| |||| || | ||||| ||||  || ||| ||||| |||||||||| ||||||    
T  25447364 ctatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataaactgttttcataagctat 25447292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 27792795 - 27792887
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||||||| |||||||||| |||||||||| | |  ||||||| |||| | |||||| | |||||||| ||| |  ||| |||||||||    
T  27792795 tttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcat 27792887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 28779280 - 28779368
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||||||| ||||| |||| ||||| ||| ||||  |  ||||||||| |||||||| | |||||||| ||| |||||| ||||||    
T  28779280 ttatcatataattgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctataagttgtttt 28779368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 33882979 - 33883043
Alignment:
Q  154 tatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||  ||||||| |||| |||| ||||| |||| || ||||||||||||| |||||||    
T  33882979 tatttctataacaaaagataaaataaagtgaaattatttttatgcaagttataagctattttcat 33883043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 46407757 - 46407840
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||||||| | | | ||||||||| |||||||||||| || | ||||| |||| ||| ||||||||| ||||| ||||    
T  46407757 ataaatgcttatgtatatgttgtttctatagcaaaagatgaaataaaat-aaattgtttttatataagttataaactgttctcat 46407840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 39105401 - 39105486
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||| |||||||||||||||  ||| |||||||||||| ||||| ||||| || ||| ||||| |||||||||| ||||||    
T  39105401 gcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctat 39105486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 12425493 - 12425585
Alignment:
Q  126 tttatcat-ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    |||||||| ||||| ||||||||| || |||||| ||||||||||||| |||| |||| ||||| ||||| || ||| |||||||||||||||    
T  12425493 tttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttca 12425585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 6738553 - 6738460
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca--tacaagttataagctgttttcat 218  Q
    ||||||||||| | |||||||| |||||||||| ||| |||||||  |||| |||||||||||||||||  || | | ||||||||||||||||    
T  6738553 ttatcatataagtacttatgtataagctatttcaataataaaagacaaaataaagtcaaattcttttcatctaaatgctataagctgttttcat 6738460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 32172577 - 32172675
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||| ||  ||||||||| || ||||||||| |  ||||||| |||||||||||| || ||| |||| ||| |||||||||||||||| ||||||    
T  32172577 ttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctat 32172675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 9202896 - 9202803
Alignment:
Q  126 tttatcat-ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||| |||| ||||||| || ||||||||||| ||| ||||||| |||| |||| ||||| |||||||| |||  |||||||||||||||    
T  9202896 tttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcat 9202803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 37063217 - 37063144
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagtt 203  Q
    ||||||||||||||||||| || |||||||||||  ||||||| |||| |||||||| | |||||||| |||||    
T  37063217 tcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataagtt 37063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 14295454 - 14295528
Alignment:
Q  151 agctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||||||  ||||||| |||| |||||||| | |||||||| ||| |||||||||||||| | ||||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctat 14295528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 16889671 - 16889757
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||||||| |||||||||| |||  ||||||| || | |||||||| | |||| ||| ||| |||||||||||||||| ||||||    
T  16889671 tgcttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctat 16889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 16945121 - 16945031
Alignment:
Q  133 tataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||| |||||||||| |||||||||||| |  ||||||| ||||  ||| ||||| |||||||| ||| |||||||| ||||||||| ||||    
T  16945121 tataagtgcttatgtataagctatttctacaagaaaagataaaat--agttaaattgttttcatagaagctataagctattttcattaactat 16945031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 18875312 - 18875373
Alignment:
Q  154 tatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||||||  ||||||  |||| ||||||||||  |||||||||||||||||||||||||    
T  18875312 tatttctatatcaaaagacaaaataaagtcaaattgatttcatacaagttataagctgtttt 18875373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 37611334 - 37611269
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||| |||||||||| |||||||||||||| |||||||  |||| || ||||||| ||||||||    
T  37611334 tcatataagtgcttatgtaaaagctatttctataataaaaga--aaatcaaatcaaattgttttcata 37611269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 37788064 - 37787999
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    |||||||| |||||||||| |||||||||||||| |||||||  |||| || ||||||| ||||||||    
T  37788064 tcatataagtgcttatgtaaaagctatttctataataaaaga--aaatcaaatcaaattgttttcata 37787999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 28586911 - 28586824
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    |||||||||  || ||||||| |  |||||||||||  ||||||| |||| |||||||| | |||||||| || ||||||||||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgtttt 28586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 41957550 - 41957499
Alignment:
Q  174 aaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||| ||||| |||||||  |||||||||||||||||||| ||||||    
T  41957550 aaatgaagttaaattgttttcatgtaagttataagctgttttcataagctat 41957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 42569113 - 42569038
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||| | ||||||||||||||| ||||||| |||| ||||| |||| ||||| || ||| ||||| |||||||    
T  42569113 gcttatgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctataatctgtttt 42569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 20982281 - 20982223
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaa 185  Q
    ||||||||||| |||||||||| ||||||||||||||  ||| ||| |||| |||||||    
T  20982281 ttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 706400 - 706437
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaat 177  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  706400 gcttatgtataagctatttctatagtaaaagataaaat 706437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 7096271 - 7096214
Alignment:
Q  129 atcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    |||||| || |||||||||| ||||||||||||||  ||||||| |||| ||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 7096214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 19177403 - 19177492
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    ||||||||||| |||||||||| || ||||||||| |  | ||||| |||| ||||| || | |||||||| ||| |||||| |||||||    
T  19177403 ttatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttgttttc 19177492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 34112812 - 34112869
Alignment:
Q  140 gcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||| ||||||||||||||||||||||| || | |||| || || ||||||||    
T  34112812 gcttatgtataagctatttctatagtaaaagattaattaaagttaagttgttttcata 34112869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 34160664 - 34160749
Alignment:
Q  136 aaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattag 221  Q
    ||||||||||||| ||| ||||||||||| | ||  | |||| || | ||||||||||| || || ||||||||| ||||||||||    
T  34160664 aaatgcttatgtataagatatttctatagcagaatgtaaaataaattgaaattcttttcgtaaaatttataagctattttcattag 34160749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 40848695 - 40848760
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttata 206  Q
    |||||||| || ||||||||| || ||||||||||||||||  | ||| |||||||| ||||||||    
T  40848695 cttatgtataaactatttctagagcaaaagatgaaatgaagatagattgttttcatataagttata 40848760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 6582955 - 6582887
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||||||| |  ||||| | ||||||||| ||||| ||||| || ||||||||| ||||||||||    
T  6582955 aagctatttctacaacaaaagctaaaatgaagttaaatttttttcttataagttataaactgttttcat 6582887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 9927524 - 9927596
Alignment:
Q  142 ttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttt 214  Q
    ||||||| ||| ||||| ||||||||||||| |||| | |||||||| |||||||| |||  ||||| |||||    
T  9927524 ttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagttgttt 9927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 11054117 - 11054165
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagt 182  Q
    ||||| ||||||||| |||||||||||||| |||||||| |||| ||||    
T  11054117 ataaacgcttatgtataagctatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 12595585 - 12595513
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctg 211  Q
    ||||| |||| ||||||||||||||| ||||||| |||| || ||||||  ||||| || || ||||||||||    
T  12595585 tgcttgtgtataagctatttctatagcaaaagataaaataaattcaaatagttttcgtataaattataagctg 12595513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 14331278 - 14331369
Alignment:
Q  127 ttatcatataaatgcttatgtagaagc-tatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||| |||||| |||| ||||| |||| ||||||||||| ||||||| |||| |||||| ||| |||| ||| |||||||||| | |||||||    
T  14331278 ttatgatataagtgctaatgtataagcctatttctatagcaaaagat-aaataaagtcagattatttttatataagttataagttattttcat 14331369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 16863708 - 16863795
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||||| ||||||||   ||||||||| ||||  ||||||| |||| || |||| |  ||| |||||||||||||||||||||||||    
T  16863708 tcatataagtgcttatgcgtaagctatttttataacaaaagattaaataaactcaactggttt-catacaagttataagctgttttcat 16863795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 26209546 - 26209461
Alignment:
Q  139 tgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca-tacaagttataagctgttttcattagctat 225  Q
    |||||||||| ||| ||||||||||  | ||||| |||| ||||| |||| |||||| || ||| |||||||||||||||| ||||||    
T  26209546 tgcttatgtataagttatttctata--acaagataaaataaagtccaattgttttcaatataagctataagctgttttcataagctat 26209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 36539670 - 36539758
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||||||| |||||||||  ||||||||| | ||  ||||||| |||| |||||||  | |||||||| ||| |||||| ||||||    
T  36539670 ttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttgtttt 36539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 37618986 - 37618926
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    |||||| ||||| |||||||| | |||||||||||||  |||||||| ||||||| |||||    
T  37618986 tttatcgtataagtgcttatgcaaaagctatttctattataaaagataaaatgaaatcaaa 37618926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 39594755 - 39594822
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||||||| ||||||| |||| |||| ||||| |||||  | ||||| ||||||||||||||    
T  39594755 aagctatttctatagaaaaagataaaataaagt-aaattgttttcgcataagttgtaagctgttttcat 39594822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 2980618 - 2980514
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatg-----aaatgaagtcaaattcttttcatacaagttataagctgttttcatta 220  Q
    |||||||||||| |||||||||| ||||||||||||||  |||| |||     |||| |||||||| | ||||||||||||||||||| |||| |||| |    
T  2980618 tttatcatataagtgcttatgtataagctatttctataacaaaaaatgaaacaaaataaagtcaaactattttcatacaagttataagttgttctcataa 2980519  T
Q  221 gctat 225  Q
    |||||    
T  2980518 gctat 2980514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 3175898 - 3175973
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    |||||| |||||||| ||||||| |||| |||||||||| ||||||   |||||||||||||||||||| ||||||    
T  3175898 aagctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctat 3175973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 47970245 - 47970310
Alignment:
Q  130 tcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca 195  Q
    |||||||| |||||||||| ||||||||||||||  ||||||| ||||||||||||| | ||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 3155543 - 3155618
Alignment:
Q  143 tatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||| ||||||||||||||| ||||||| |||| |||| ||||| ||||  |||||| || |||||||||||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcat 3155618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 9680595 - 9680658
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||||| || |||||    
T  9680595 ataaatgcttatgtataagctatttcgataataaaagataaaataaagtcaaattgttctcata 9680658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 22684662 - 22684592
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcata 197  Q
    ||||||||||||||||| |||| ||||||||||||||  ||| | | |||| |||||||||| ||||||||    
T  22684662 ttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcata 22684592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 54325183 - 54325093
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    ||||||||||| ||||| |||| || ||||||||||   ||||||| |||| |||||||| | |||||||| ||| |||||||| ||||||    
T  54325183 ttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttca 54325093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 6364087 - 6364172
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctata 226  Q
    |||||||| ||||||||||||||  ||||||| |||| |||| ||||||| |||| | ||| |||||||  ||||||| |||||||    
T  6364087 cttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctata 6364172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 437568 - 437480
Alignment:
Q  138 atgcttatgtagaagcta-tttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||||||| |||||| ||| ||||| ||||||| |||| |||| ||||| | |||||| ||||| |||| ||||||||| ||||||    
T  437568 atgcttatgtataagctattttttatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctat 437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 1706553 - 1706637
Alignment:
Q  134 ataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||| |||||||||||||||||||| ||||| ||||| | |||| | ||  |||| ||||| || ||| ||||||||||||||||    
T  1706553 ataagtgcttatgtagaagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagctataagctgttttcat 1706637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 4191662 - 4191734
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagat-gaaatgaagtcaaattcttttcata 197  Q
    |||||||||||| |||||||||| ||||||||||||||  |||||||  |||| |||||||| | ||||||||    
T  4191662 tttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 1404351 - 1404414
Alignment:
Q  132 atataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca 195  Q
    |||||||||||| | || |||||||||||||| |||||||| |||| | |||||||| ||||||    
T  1404351 atataaatgcttttttataagctatttctataataaaagataaaataaggtcaaattgttttca 1404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 19422342 - 19422401
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    |||||||||||||||||||||| ||| ||||||||||  |||||||  ||| ||||||||    
T  19422342 ttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaa 19422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 24091389 - 24091478
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    ||||||||||||||| |||| | ||||||||||||||| | || |  |||| |||||||||| |||||||| ||| ||||| ||||||||||    
T  24091389 ttatcatataaatgc-tatgcataagctatttctatag-agaaaagtaaataaagtcaaattattttcatataagctataaactgttttcat 24091478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 49085939 - 49086010
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagcta 224  Q
    |||||| ||||  ||||||| |||| | |||||| | ||||||||||||||||||| ||||||||| |||||    
T  49085939 ctatttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataagcta 49086010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 5219646 - 5219556
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttca 217  Q
    ||||||||||| |||| ||||| | ||||| |||||| |||||||| |||| |||| ||| | |||||||| || | ||||||| ||||||    
T  5219646 ttatcatataagtgctcatgtatatgctatctctataataaaagataaaataaagttaaactattttcatataaataataagctattttca 5219556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 43824231 - 43824296
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttc 216  Q
    ||||||||||| ||| ||||||| || | || |||||||||||||||| |||||||||||| |||||    
T  43824231 aagctatttctttagcaaaagat-aattaaaatcaaattcttttcatataagttataagcttttttc 43824296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 46415938 - 46415840
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 225  Q
    ||||||| ||| |||||| ||| |||||||||| |||  ||||||| ||||    ||||| | ||||||||||||||||||| | ||||||| ||||||    
T  46415938 ttatcatctaagtgcttacgtataagctatttcaataacaaaagataaaataggatcaaactgttttcatacaagttataagttcttttcataagctat 46415840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 4071832 - 4071905
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctata 226  Q
    |||||||||||  ||||||| |||| |||||||||| |||||||| ||| |||||| |||| | || |||||||    
T  4071832 ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgttatgataagctata 4071905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 17884015 - 17884092
Alignment:
Q  150 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctatat 227  Q
    ||||||||||||||  ||||||| |||| |||| ||||| ||||  || ||||||| || ||||||||| ||||||||    
T  17884015 aagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatat 17884092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 23459578 - 23459643
Alignment:
Q  153 ctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcat 218  Q
    |||||| ||||| ||||||| ||||||||| || || ||||| || ||| ||||||||||||||||    
T  23459578 ctatttttatagcaaaagataaaatgaagttaagttgttttcttataagctataagctgttttcat 23459643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 30024623 - 30024704
Alignment:
Q  126 tttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataa 207  Q
    |||||||||||| | |||||| | ||| ||||||||||  ||||||| |||| |||| ||||| |||||||| ||| |||||    
T  30024623 tttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 37733937 - 37734002
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttata 206  Q
    ||||| || ||||||||||||||| || ||||  ||| ||||||||||||||||||| ||| ||||    
T  37733937 cttatttataagctatttctatagcaagagatacaataaagtcaaattcttttcataaaaggtata 37734002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 3249860 - 3249792
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca 195  Q
    ||||||||||| ||  |||||  ||| |||||||||  ||||||||||||| ||||||||| |||||||    
T  3249860 ttatcatataagtgtgtatgtgtaagttatttctatgataaaagatgaaataaagtcaaatacttttca 3249792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 9843812 - 9843776
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctata 163  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  9843812 ttatcatataactgcttatgtataagctatttctata 9843776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 21193937 - 21193981
Alignment:
Q  142 ttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    ||||||| ||||||||| ||||||||||||| |||| ||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaataaagtcaaa 21193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 40174503 - 40174584
Alignment:
Q  141 cttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagcta 224  Q
    |||||||| |||||||||  |||| |||| || || | |||| ||||| |||||||| ||| |||||||||||||||| |||||    
T  40174503 cttatgtataagctattt--atagcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcataagcta 40174584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 49803151 - 49803203
Alignment:
Q  143 tatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttca 195  Q
    |||||| ||| ||||||||||| ||||||| ||||||||| ||||| ||||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaatgaagttaaattgttttca 49803203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 55994333 - 55994297
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctata 163  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  55994333 ttattatataaatgcttatgtataagctatttctata 55994297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 1219 - 1161
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    |||||||||| |||||||||| ||||||||||||||  ||||||| |||| ||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 2756 - 2814
Alignment:
Q  128 tatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaa 186  Q
    |||||||||| |||||||||| ||||||||||||||  ||||||| |||| ||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 2814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 6783 - 6695
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||||||| |||||||||| || |||||||||||  |||| || || | |||||||||| |||||||| | |||| ||| ||||||    
T  6783 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgtttt 6695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 116702 - 116614
Alignment:
Q  127 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 215  Q
    ||||||||||| |||||||||| || |||||||||||  |||| || || | |||||||||| |||||||| | |||| ||| ||||||    
T  116702 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgtttt 116614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University