View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2841_high_4 (Length: 239)
Name: NF2841_high_4
Description: NF2841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2841_high_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 40383634 - 40383413
Alignment:
| Q |
18 |
aatccgtgagcttgaagagactcccggaggaacaaaaagccttgtagagttcaacaagtcatggcagttaaagtataaaccagcatctgtaactgccgtt |
117 |
Q |
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|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40383634 |
aatccgtgagcttgaagaaaatcccggaggaacaaaaagccttgtagagttcaacaagtcatggcagttaaagtataaaccagcatctgtaactgccgtt |
40383535 |
T |
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| Q |
118 |
aacggacctaaaatgtcgttaaaagacgccatcagtgccagtatctcaagagggaaattagtctcaggaactaatggtggtaatggaaacggtaactcaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
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| T |
40383534 |
aacggacctaaaatgtcgttaaaagacgccatcagtgcgagtatctcaagagggaaattagtctcaggaactaacggtggtaatggcaacggtaactcaa |
40383435 |
T |
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| Q |
218 |
ttgcgtcctcagttgccacttt |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
40383434 |
ttgcgtcctcagttgccacttt |
40383413 |
T |
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