View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2841_high_5 (Length: 236)

Name: NF2841_high_5
Description: NF2841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2841_high_5
NF2841_high_5
[»] scaffold0115 (1 HSPs)
scaffold0115 (118-236)||(22024-22142)
[»] chr2 (10 HSPs)
chr2 (118-236)||(42625065-42625183)
chr2 (14-60)||(42624961-42625007)
chr2 (134-203)||(13807554-13807623)
chr2 (119-203)||(5110217-5110301)
chr2 (119-203)||(5938737-5938821)
chr2 (119-203)||(31575978-31576062)
chr2 (134-203)||(5704612-5704681)
chr2 (119-203)||(45151275-45151359)
chr2 (133-199)||(45458441-45458507)
chr2 (134-174)||(13626366-13626406)
[»] chr7 (15 HSPs)
chr7 (118-236)||(27336902-27337020)
chr7 (14-60)||(27337078-27337124)
chr7 (134-203)||(36298784-36298853)
chr7 (119-200)||(38440478-38440559)
chr7 (119-200)||(22519236-22519316)
chr7 (134-203)||(28636376-28636445)
chr7 (119-203)||(30541523-30541607)
chr7 (119-177)||(31457297-31457355)
chr7 (134-203)||(5972970-5973039)
chr7 (134-203)||(25502150-25502219)
chr7 (135-203)||(47924983-47925054)
chr7 (119-203)||(1053155-1053239)
chr7 (119-203)||(15954671-15954755)
chr7 (119-203)||(23809712-23809796)
chr7 (134-200)||(33189404-33189468)
[»] chr5 (9 HSPs)
chr5 (118-203)||(39800453-39800538)
chr5 (118-236)||(40056943-40057055)
chr5 (14-60)||(39800349-39800395)
chr5 (119-203)||(35188630-35188714)
chr5 (119-203)||(39207154-39207238)
chr5 (134-203)||(3926203-3926272)
chr5 (119-203)||(23429243-23429327)
chr5 (134-203)||(42878946-42879015)
chr5 (119-203)||(2209543-2209626)
[»] chr4 (12 HSPs)
chr4 (118-201)||(40571942-40572026)
chr4 (119-203)||(8819348-8819432)
chr4 (14-60)||(40571838-40571884)
chr4 (132-200)||(23626855-23626923)
chr4 (132-201)||(17120332-17120401)
chr4 (119-203)||(51357179-51357262)
chr4 (134-203)||(41039344-41039413)
chr4 (119-196)||(42555329-42555406)
chr4 (119-203)||(40714888-40714972)
chr4 (119-174)||(22278352-22278407)
chr4 (134-201)||(38951633-38951700)
chr4 (134-203)||(29117031-29117100)
[»] chr3 (11 HSPs)
chr3 (121-201)||(12149029-12149109)
chr3 (120-203)||(5295217-5295300)
chr3 (132-203)||(48251715-48251786)
chr3 (132-200)||(36584410-36584478)
chr3 (137-200)||(25874758-25874821)
chr3 (134-203)||(3778959-3779028)
chr3 (134-203)||(27926674-27926742)
chr3 (119-174)||(13084737-13084792)
chr3 (28-58)||(12149171-12149201)
chr3 (134-199)||(21288110-21288175)
chr3 (133-178)||(37341460-37341505)
[»] chr1 (13 HSPs)
chr1 (138-236)||(25294014-25294112)
chr1 (119-201)||(11894301-11894383)
chr1 (134-203)||(36728800-36728869)
chr1 (134-203)||(47140795-47140864)
chr1 (132-203)||(38264378-38264449)
chr1 (132-174)||(52252717-52252759)
chr1 (134-203)||(31585280-31585349)
chr1 (132-200)||(2191841-2191909)
chr1 (132-203)||(25987397-25987468)
chr1 (134-203)||(17562833-17562902)
chr1 (134-203)||(48379137-48379206)
chr1 (119-203)||(19884442-19884526)
chr1 (119-200)||(29678351-29678432)
[»] chr8 (6 HSPs)
chr8 (134-203)||(13355812-13355881)
chr8 (119-203)||(8227281-8227365)
chr8 (119-203)||(9762964-9763048)
chr8 (134-203)||(7968483-7968552)
chr8 (134-203)||(36582940-36583009)
chr8 (119-199)||(6870666-6870746)
[»] chr6 (7 HSPs)
chr6 (134-203)||(8576759-8576828)
chr6 (132-200)||(7245532-7245600)
chr6 (134-203)||(35167338-35167407)
chr6 (134-203)||(642112-642181)
chr6 (134-203)||(10788485-10788554)
chr6 (134-203)||(34433250-34433319)
chr6 (119-203)||(28582150-28582233)
[»] scaffold0057 (1 HSPs)
scaffold0057 (132-173)||(66580-66621)
[»] scaffold0155 (1 HSPs)
scaffold0155 (139-203)||(6945-7009)


Alignment Details
Target: scaffold0115 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 22142 - 22024
Alignment:
Q  118 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctnnnnnnnnntgcat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||    
T  22142 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctaaaaaaaaatgcat 22043  T
Q  218 gttatgaatttttggtttt 236  Q
    |||||||||||||||||||    
T  22042 gttatgaatttttggtttt 22024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 42625065 - 42625183
Alignment:
Q  118 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctnnnnnnnnntgcat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||    
T  42625065 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctaaaaaaaaatgcat 42625164  T
Q  218 gttatgaatttttggtttt 236  Q
    |||||||||||||||||||    
T  42625165 gttatgaatttttggtttt 42625183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 42624961 - 42625007
Alignment:
Q  14 tcaggagctaggaagtgaaagtgattgacattgctgaagctataagc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42624961 tcaggagctaggaagtgaaagtgattgacattgctgaagctataagc 42625007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 13807623 - 13807554
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  13807623 actttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 13807554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 5110301 - 5110217
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | || |||||||||||||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  5110301 tattaaatgtaagggacattatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 5110217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 5938821 - 5938737
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||||||||||||||| ||||||||| ||||||||||||| || |||| |||  ||| |||||||||||    
T  5938821 tattaaatgtaagggactttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaatactatgttttgct 5938737  T

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Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 31575978 - 31576062
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||||||||||||||| ||||||||| |||||||||| || || |||| |||  |||||||||||||||    
T  31575978 tattaaatgtaagggactttatttatgtttttgttgagtcaatgatctttgttattattgtaatgtatgaatattatgttttgct 31576062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 5704681 - 5704612
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||| ||||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  5704681 actttatttatatttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 5704612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 45151275 - 45151359
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||| ||||||||||| |||| |||| ||||||||||||| || |||| |||  |||||||||||||||    
T  45151275 tattaaatgtaagggactttgtttatgtttttgttgaatcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 45151359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 45458441 - 45458507
Alignment:
Q  133 aactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttt 199  Q
    |||||||||||||||||| |||| |||| ||||||||||||| |  |||| ||| ||||||||||||    
T  45458441 aactttatttatgtttttgttgaatcaatgatctttgttgttatggtaatgtatggatattatgttt 45458507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 13626366 - 13626406
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgtt 174  Q
    ||||||||||||||||| ||||||||| |||||||| ||||    
T  13626366 actttatttatgtttttgttgagtcaatgatctttggtgtt 13626406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 27337020 - 27336902
Alignment:
Q  118 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctnnnnnnnnntgcat 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||    
T  27337020 ctattaaatgtagtgaactttatctatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctaaaaaaaaatgcat 27336921  T
Q  218 gttatgaatttttggtttt 236  Q
    |||||||||||||||||||    
T  27336920 gttatgaatttttggtttt 27336902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 27337124 - 27337078
Alignment:
Q  14 tcaggagctaggaagtgaaagtgattgacattgctgaagctataagc 60  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  27337124 tcaggagttaggaagtgaaagtgattgacattgctgaagctataagc 27337078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 36298853 - 36298784
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||| || |||| ||| ||||||||| ||||||    
T  36298853 actttatttatgtttttgttgagtcaatgatctttgttgttattgtaatatatggatattatggtttgct 36298784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 38440478 - 38440559
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||| || |||| |||  ||||||||||||    
T  38440478 tattaaatgcaaggaactttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgtttt 38440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 22519236 - 22519316
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    ||||||||||| ||||||||||||||| |||  ||||||||| || |||||||||| || |||| ||| |||||||||||||    
T  22519236 tattaaatgtaatgaactttatttatg-tttcgttgagtcaatgaactttgttgtttttgtaatgtatagatattatgtttt 22519316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 28636445 - 28636376
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| |||||||||| || || |||| |||  |||||||||||||||    
T  28636445 actttatttatgtttttgttgagtcaatgatctttgtttttattgtaatgtatgaatattatgttttgct 28636376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 30541523 - 30541607
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||| |  |||| |||||||||||| || |||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  30541523 tattaaatgtaatagacttgatttatgtttttcttaagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 30541607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 31457355 - 31457297
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgtt 177  Q
    |||||||| ||  ||||||||||||||||||| ||||||||| |||||||||| |||||    
T  31457355 tattaaatataaggaactttatttatgtttttgttgagtcaatgatctttgtttttgtt 31457297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 5973039 - 5972970
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||| ||| ||||||||| ||||||| ||||| || |||| |||  |||||||||||||||    
T  5973039 actttatttatgtattttttgagtcaatgatcttttttgttattgtaatgtatgaatattatgttttgct 5972970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 25502219 - 25502150
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| |||||||||||||  | |||| |||  ||||||| |||||||    
T  25502219 actttatttatgtttttgttgagtcaatgatctttgttgttaatgtaatgtatgaatattatattttgct 25502150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 47925054 - 47924983
Alignment:
Q  135 ctttatttatgtttttattgagtcaaggatct---ttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||||||| |||||||||||||||   ||||| ||||| |||| |||  |||||||||||||||    
T  47925054 ctttatttatgtttttgttgagtcaaggatctttattgttattgttgtaatgtatgtatattatgttttgct 47924983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 1053155 - 1053239
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||| |  ||| ||||||||||||||| |||||| || ||||||||||||| |  |||| |||  |||||||||||||||    
T  1053155 tattaaatgcaaggaattttatttatgtttttgttgagttaatgatctttgttgttatcgtaatgtatgaatattatgttttgct 1053239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 15954671 - 15954755
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||   |||||||||||||||||||  |||||||| ||||||||||||| || | || |||   ||||||||||||||    
T  15954671 tattaaatgttaggaactttatttatgtttttggtgagtcaatgatctttgttgttattgtcatgtatgtctattatgttttgct 15954755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 23809712 - 23809796
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||| ||||||||||| ||||||||| ||||||||||||| || |||| |||  | || ||||||||||    
T  23809712 tattaaatgtaagggactttttttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaacatgatgttttgct 23809796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 33189468 - 33189404
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    ||||||||||||||||| ||||||||| ||||||| ||||| || |||| ||| |||||||||||||    
T  33189468 actttatttatgtttttgttgagtcaatgatcttt-ttgttattgtaatgtat-gatattatgtttt 33189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 39800453 - 39800538
Alignment:
Q  118 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39800453 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 39800538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 40057055 - 40056943
Alignment:
Q  118 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctnnnnnnnnntgcat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      ||||||||||||||||         |||||    
T  40057055 ctattaaatgtagtgaactttatttatgtttttattgagtcaaggatttttgttgttgttataa------gatattatgttttgctaaaaaaaaatgcat 40056962  T
Q  218 gttatgaatttttggtttt 236  Q
    |||||||||||||||||||    
T  40056961 gttatgaatttttggtttt 40056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 39800349 - 39800395
Alignment:
Q  14 tcaggagctaggaagtgaaagtgattgacattgctgaagctataagc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39800349 tcaggagctaggaagtgaaagtgattgacattgctgaagctataagc 39800395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 35188630 - 35188714
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||||||||||||||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  35188630 tattaaatgtaagggactttatttatgtttttgttgagtcaatgatctttgttgttattgtaatttatgaatattatgttttgct 35188714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 39207154 - 39207238
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||||||||||||||| ||| ||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  39207154 tattaaatgtaagggactttatttatgtttttgttgtgtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 39207238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 3926272 - 3926203
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||| ||||||||| || |||| |||  |||||||||||||||    
T  3926272 actttatttatgtttttgttgagtcaatgatttttgttgttattgtaatgtatgaatattatgttttgct 3926203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 23429327 - 23429243
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||||||||||||||| |||||| || ||||||||||||| || | || |||  |||||||||||||||    
T  23429327 tattaaatgtaacggactttatttatgtttttgttgagtaaatgatctttgttgttattgtgatatatgaatattatgttttgct 23429243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 42878946 - 42879015
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| |||||| || ||||||||||||| || |||| |||  ||||||  |||||||    
T  42878946 actttatttatgtttttgttgagttaatgatctttgttgttattgtaatgtatgaatattacattttgct 42879015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 2209626 - 2209543
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||| ||  |||| ||| |||||||||| ||||||||| ||||||||| ||| |||| || ||  ||||||||||||||||    
T  2209626 tattaaatataaggaacgttaattatgtttttgttgagtcaatgatctttgt-gttattatgatgtacggatattatgttttgct 2209543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 40571942 - 40572026
Alignment:
Q  118 ctattaaatgtagtgaactttatttatgtttt-tattgagtcaaggatctttgttgttgttataatctatcgatattatgttttg 201  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40571942 ctattaaatgtagtgaactttatttatgttttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttg 40572026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 8819348 - 8819432
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  ||||||||||||||||||| |||| |||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  8819348 tattaaatgtaaggaactttatttatgtttttgttgaatcaatgatctttgttgttattataatgtatagatattatgttttgct 8819432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 40571838 - 40571884
Alignment:
Q  14 tcaggagctaggaagtgaaagtgattgacattgctgaagctataagc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40571838 tcaggagctaggaagtgaaagtgattgacattgctgaagctataagc 40571884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 23626923 - 23626855
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| || |||| ||| |||||||||||||    
T  23626923 gaaccttatttatgtttttgttgagtcaatgatctttgttgttattgtaatatatggatattatgtttt 23626855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 17120332 - 17120401
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttg 201  Q
    |||||||||||| |||||| ||||||||| |||| |||||||| || |||| ||| ||||||||||||||    
T  17120332 gaactttatttaggtttttgttgagtcaatgatcattgttgttattgtaatgtatggatattatgttttg 17120401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 51357262 - 51357179
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  |||||| |||||||||| | |||||||||  |||||||||||| || |||| ||| ||||||||||||||||    
T  51357262 tattaaatgtaaggaactt-atttatgtttctgttgagtcaataatctttgttgttattgtaatgtatggatattatgttttgct 51357179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 41039413 - 41039344
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||| || |||| |||   ||| ||||||||||    
T  41039413 actttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgactatgatgttttgct 41039344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 42555406 - 42555329
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatg 196  Q
    |||||||||||  || |||||||||||||||| ||||||||| || |||||||||| || |||| |||  ||||||||    
T  42555406 tattaaatgtaaggatctttatttatgtttttgttgagtcaatgaactttgttgttattgtaatgtatgtatattatg 42555329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 40714888 - 40714972
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||| |||  |||| |||||||||||||| ||||||||| |||||||||  || || |||| ||| |||||||| |||||||    
T  40714888 tattaaaagtaaggaacattatttatgtttttgttgagtcaatgatctttgtctttattgtaatgtattgatattatattttgct 40714972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 22278407 - 22278352
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgtt 174  Q
    |||||||||||  | ||||||||||||||||| || |||||| |||||||||||||    
T  22278407 tattaaatgtaagggactttatttatgtttttgttaagtcaatgatctttgttgtt 22278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 38951700 - 38951633
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttg 201  Q
    ||||||| ||||| ||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||    
T  38951700 actttatatatgtgtttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttg 38951633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 29117100 - 29117031
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| || | |||| |||||||||| || || |||| |||  |||||||||||||||    
T  29117100 actttatttatgtttttgttaaatcaatgatctttgttattattgtaatgtatgaatattatgttttgct 29117031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 12149109 - 12149029
Alignment:
Q  121 ttaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttg 201  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12149109 ttaaatgtagtgaactttatttatgtttttattgagtcaatgatctttgttgttgttataatctatcgatattatgttttg 12149029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 5295300 - 5295217
Alignment:
Q  120 attaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||  | ||||||||||||||||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  5295300 attaaatgtaagggactttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 5295217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 48251715 - 48251786
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| || |||| ||| ||||||||||||||||    
T  48251715 gaactttatttatgtttttgttgaatcaatgatctttgttgttattgtaatgtatggatattatgttttgct 48251786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 36584478 - 36584410
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| ||||||| |||  ||||||| ||||    
T  36584478 gaactttatttatgtttttcttgaatcaatgatctttgttgttattataatgtatgaatattatatttt 36584410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 25874758 - 25874821
Alignment:
Q  137 ttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    |||||||||||||||||||||||  ||||||||||||| || |||| |||  ||||||||||||    
T  25874758 ttatttatgtttttattgagtcattgatctttgttgttattgtaatgtatgaatattatgtttt 25874821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 3778959 - 3779028
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| |||||||||| || || || | |||  |||||||||||||||    
T  3778959 actttatttatgtttttgttgagtcaatgatctttgttattattgtagtgtatgaatattatgttttgct 3779028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 27926674 - 27926742
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||  ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  27926674 actttatttatgttttg-ttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 27926742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 13084737 - 13084792
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgtt 174  Q
    |||||||||||  ||| ||||||||||||||| ||||||||  |||||||||||||    
T  13084737 tattaaatgtaaagaattttatttatgtttttgttgagtcattgatctttgttgtt 13084792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 12149201 - 12149171
Alignment:
Q  28 gtgaaagtgattgacattgctgaagctataa 58  Q
    |||||||||||||||||||||||||||||||    
T  12149201 gtgaaagtgattgacattgctgaagctataa 12149171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 21288175 - 21288110
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttt 199  Q
    ||||||||||||||||| ||||||||| ||||||| |||||  | |||| |||  |||||||||||    
T  21288175 actttatttatgtttttgttgagtcaatgatctttattgttagtgtaatgtatgaatattatgttt 21288110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 37341460 - 37341505
Alignment:
Q  133 aactttatttatgtttttattgagtcaaggatctttgttgttgtta 178  Q
    |||||||||||||||||| |||| ||||||| ||||||| ||||||    
T  37341460 aactttatttatgttttttttgaatcaaggaactttgtttttgtta 37341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 25294014 - 25294112
Alignment:
Q  138 tatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctnnnnnnnnntgcatgttatgaatttttggtttt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  25294014 tatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgctaaaaaaaaatgcatgttatgaatttttggtttt 25294112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 11894383 - 11894301
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttg 201  Q
    |||||||||||   |||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||  |||||||||||||    
T  11894383 tattaaatgtaagcaactttatttatgtttttgttgagtcaatgatctttgttgttattataatgtatgaatattatgttttg 11894301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 36728800 - 36728869
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||| || |||| | | ||||||||||||||||    
T  36728800 actttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtgtggatattatgttttgct 36728869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 47140864 - 47140795
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||  |||||||||||||||    
T  47140864 actttatttatgtttttgttgagtcaatgatttttgttgttgttgtaatgtatgtatattatgttttgct 47140795  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 38264378 - 38264449
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  38264378 gaactttatttatatttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 38264449  T

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Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 52252759 - 52252717
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgtt 174  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  52252759 gaactttatttatgtttttattgagtcaaagatctttgttgtt 52252717  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 31585280 - 31585349
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||| ||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  31585280 actttatttatgtttttgttgggtcaatgatctttgttgttattgtaatgtatgtatattatgttttgct 31585349  T

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Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 2191841 - 2191909
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| || |||| ||  |||||||||||||    
T  2191841 gaactttatttatgtttttgttgagtcaatgatttttgttgttattgtaatgtagtgatattatgtttt 2191909  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 25987468 - 25987397
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||||| |||||| || ||||||| ||||| || |||| |||  |||||||||||||||    
T  25987468 gaactttatttatgtttttgttgagttaatgatcttttttgttattttaatgtatgaatattatgttttgct 25987397  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 17562833 - 17562902
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||| ||||||| ||| ||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  17562833 actttatttctgtttttgttgggtcaatgatctttgttgttattgtaatgtatgtatattatgttttgct 17562902  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 48379137 - 48379206
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||| || |||| |||   ||| ||||||||||    
T  48379137 actttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgactatgatgttttgct 48379206  T

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Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 19884442 - 19884526
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||| |||  ||| ||||||||| ||||| ||||||||| |||||||||| || || |||| |||  |||||||||||||||    
T  19884442 tattaaaagtaaggaattttatttatatttttgttgagtcaatgatctttgttattattgtaatgtatgaatattatgttttgct 19884526  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 29678351 - 29678432
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    |||||||||||  | | |||||||||| |||| ||||||||| ||||||||||||| || |||| |||  ||| ||||||||    
T  29678351 tattaaatgtaagggaatttatttatgattttgttgagtcaatgatctttgttgttattgtaatgtatgaataatatgtttt 29678432  T

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Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 13355881 - 13355812
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| || |||||| |||||||||||||||| |||| ||| ||||||||||||||||    
T  13355881 actttatttatgtttttgttaagtcaatgatctttgttgttgttctaatgtatggatattatgttttgct 13355812  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 8227281 - 8227365
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||||||||||||||| || |||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  8227281 tattaaatgtaagggactttatttatgtttttgtttagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 8227365  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 9762964 - 9763048
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||  | ||||||||||||||||| ||||||||| ||| ||||||||| || |||| |||  |||||||||||||||    
T  9762964 tattaaatgtaagggactttatttatgtttttgttgagtcaatgatttttgttgttattgtaatgtatgaatattatgttttgct 9763048  T

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Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 7968483 - 7968552
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| || || ||| ||||||||||||| || |||| ||| ||||||||||||||||    
T  7968483 actttatttatgtttttgtttagccaatgatctttgttgttattgtaatgtatggatattatgttttgct 7968552  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 36582940 - 36583009
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| | ||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  36582940 actttatttatgtttttgtggagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 36583009  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 6870666 - 6870746
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttt 199  Q
    |||||||||||  ||||||||||||| ||||| ||  ||||| ||||||||||||  || |||| |||  |||||||||||    
T  6870666 tattaaatgtaaggaactttatttatatttttgtttggtcaatgatctttgttgtaattgtaatgtatgaatattatgttt 6870746  T

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Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 8576828 - 8576759
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||| || |||| |||  |||||||||||||||    
T  8576828 actttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgttttgct 8576759  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 7245532 - 7245600
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgtttt 200  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| || |||| |||  ||||||||||||    
T  7245532 gaactttatttatgtttttgttgagtcaatgatctttgttgttattgtaatgtatgaatattatgtttt 7245600  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 35167338 - 35167407
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| || |||||| ||||||||||||| || |||| ||  ||||||||||||||||    
T  35167338 actttatttatgtttttgttaagtcaatgatctttgttgttattgtaatgtacggatattatgttttgct 35167407  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 642112 - 642181
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| || |||||| ||||||||||||| || |||| |||  ||||| |||||||||    
T  642112 actttatttatgtttttgttaagtcaatgatctttgttgttattgtaatgtatgaatattttgttttgct 642181  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 10788554 - 10788485
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||||||||| |||| |||| ||||||||||||| || |||| |||  ||||| |||||||||    
T  10788554 actttatttatgtttttgttgactcaatgatctttgttgttattgtaatgtatgaatattctgttttgct 10788485  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 34433250 - 34433319
Alignment:
Q  134 actttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    ||||||||||  ||||| || |||||| ||||||||||||| || |||| ||| ||||||||||||||||    
T  34433250 actttatttacatttttgttaagtcaatgatctttgttgttattgtaatgtatagatattatgttttgct 34433319  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 28582233 - 28582150
Alignment:
Q  119 tattaaatgtagtgaactttatttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||   | |||||||||||||||||| ||||||| ||| ||||||| | || |||| ||| ||||||||||||||||    
T  28582233 tattaaatgtaagaagctttatttatgtttttatcgagtcaatgatttttgttgctattttaat-tatggatattatgttttgct 28582150  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 66621 - 66580
Alignment:
Q  132 gaactttatttatgtttttattgagtcaaggatctttgttgt 173  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  66621 gaactttatttatgtttttgttgagtcaatgatctttgttgt 66580  T

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Target: scaffold0155 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 6945 - 7009
Alignment:
Q  139 atttatgtttttattgagtcaaggatctttgttgttgttataatctatcgatattatgttttgct 203  Q
    |||||||||||| ||||||||| ||||||||||||| || |||  |||  |||||||||||||||    
T  6945 atttatgtttttgttgagtcaatgatctttgttgttattgtaaaatatgaatattatgttttgct 7009  T

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