View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2841_low_7 (Length: 270)
Name: NF2841_low_7
Description: NF2841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2841_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 40383089 - 40383350
Alignment:
| Q |
9 |
gagatgatggagtgtgcaaggacataggaagaacgacggtaagcgttgtaagcagtttctctcatgaaaatgtaacgctcttgaaggaaaacggggatag |
108 |
Q |
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| T |
40383089 |
gagatgatggagtgtgcaaggacataggaagaacgacggtaagcgttgtaagcagtttctctcatgaaaatgtaacgctcttgaaggaaaacggggatag |
40383188 |
T |
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| Q |
109 |
cttcagcacaagtgtagaaggttgttgacatggcaaaggcgaagaaacccaaacgctcttgaacaccttttggtgaatcgtcaagacggtaaaagatggt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40383189 |
cttcagcacaagtgtagaaggttgttgacatggcaaaggcgaagaaacccaaacgctcttgaacaccttttggtgaatcgtcaagacggtaaaagatggt |
40383288 |
T |
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| Q |
209 |
ggccaagattcctccggtaaccagaactgcaccgagacggattccgaataattccggcatcc |
270 |
Q |
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| T |
40383289 |
ggccaagattcctccggtaaccagaactgcaccgagacggattccgaataattccggcatcc |
40383350 |
T |
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