View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2842_low_7 (Length: 248)
Name: NF2842_low_7
Description: NF2842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2842_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 41283004 - 41282780
Alignment:
| Q |
10 |
acatcatcacaatccgcaatttcaacaagatacggtaacgccgaacgttgctgactctgcgtccaccgattagaaagcttcacagnnnnnnntctactat |
109 |
Q |
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| T |
41283004 |
acatcatcacaatccgcaatttcaacaagatacggtaacgccgaacgttgctgactctgcgtccaccgatcagaaagcttgacagaaaaaaatctactat |
41282905 |
T |
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| Q |
110 |
gcgcaacaagaatctgacgatgcacattcatggaaacactgaatccatctttagaactaagagtaagcttaatatcactggaagatgaatcattgaaatg |
209 |
Q |
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| T |
41282904 |
gcgcaacaagaatctgacgatgcacattcatggaaacactgaatccatctttagaactaagagtaagcttaatatcactggaagatgaatcattgaaatg |
41282805 |
T |
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| Q |
210 |
attaccaggactacgtgaagataat |
234 |
Q |
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| T |
41282804 |
attaccaggactacgtgaagataat |
41282780 |
T |
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