View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2843_low_8 (Length: 231)
Name: NF2843_low_8
Description: NF2843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2843_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 18168812 - 18169020
Alignment:
| Q |
1 |
attggacacgacaatgatttctctttagagtgcatggccattagtggcaattcaagtgaaatagcactagaatttttgatgtctcttatatcttctaatg |
100 |
Q |
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| T |
18168812 |
attggacacgacaatgatttctcttctgagtgcatggccattagtggcaattcaagtgaaatagcactagaatttttgaagtctcttatatcttctaatg |
18168911 |
T |
|
| Q |
101 |
aatgtttctcttcctttctctctgagctctcagaagatgtcaatgaactttccaatgaacacaaagaagttccattgtcatgtttcctctcctcgtagtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
18168912 |
aatgtttctcttcctttctctctgagctctcagaagatgtcaaagaactttccaatgaacacaaagaagttccattttcatgtttcctctcctcgtagtt |
18169011 |
T |
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| Q |
201 |
taaacttaa |
209 |
Q |
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| T |
18169012 |
taaacttaa |
18169020 |
T |
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