View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2844_low_24 (Length: 251)

Name: NF2844_low_24
Description: NF2844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2844_low_24
NF2844_low_24
[»] chr2 (17 HSPs)
chr2 (107-233)||(39292830-39292956)
chr2 (10-107)||(21471016-21471113)
chr2 (10-107)||(37547997-37548094)
chr2 (10-106)||(21471906-21472002)
chr2 (9-106)||(13134318-13134415)
chr2 (10-107)||(38834588-38834685)
chr2 (10-106)||(4479654-4479750)
chr2 (10-107)||(14573951-14574048)
chr2 (10-106)||(14573261-14573357)
chr2 (10-109)||(38834384-38834483)
chr2 (58-106)||(33433160-33433208)
chr2 (72-107)||(1164790-1164825)
chr2 (58-108)||(5276463-5276513)
chr2 (57-106)||(40992222-40992271)
chr2 (58-107)||(4478850-4478899)
chr2 (58-107)||(19521917-19521966)
chr2 (74-106)||(17069121-17069153)
[»] chr4 (47 HSPs)
chr4 (10-107)||(11417686-11417783)
chr4 (10-106)||(11417889-11417985)
chr4 (10-109)||(31836412-31836511)
chr4 (10-107)||(21166327-21166424)
chr4 (10-107)||(26611235-26611332)
chr4 (10-107)||(29651284-29651381)
chr4 (10-106)||(10424123-10424219)
chr4 (10-106)||(36865669-36865765)
chr4 (10-107)||(9939323-9939420)
chr4 (10-107)||(10425011-10425108)
chr4 (10-102)||(38143689-38143781)
chr4 (10-101)||(26610350-26610441)
chr4 (10-106)||(38694906-38695002)
chr4 (10-106)||(45230365-45230461)
chr4 (14-106)||(45235916-45236008)
chr4 (10-105)||(29650416-29650511)
chr4 (10-105)||(36864818-36864913)
chr4 (10-107)||(39522374-39522471)
chr4 (10-106)||(21165447-21165543)
chr4 (10-106)||(38694702-38694798)
chr4 (29-106)||(39523242-39523319)
chr4 (10-88)||(38143506-38143584)
chr4 (10-106)||(31835148-31835244)
chr4 (10-107)||(9939124-9939218)
chr4 (58-116)||(47198595-47198653)
chr4 (57-108)||(47377597-47377648)
chr4 (10-92)||(25970120-25970201)
chr4 (58-100)||(55159186-55159228)
chr4 (58-101)||(3848578-3848621)
chr4 (72-106)||(10424385-10424419)
chr4 (10-68)||(11806129-11806187)
chr4 (72-106)||(21166137-21166171)
chr4 (57-107)||(28684231-28684281)
chr4 (72-106)||(29650655-29650689)
chr4 (72-106)||(31836221-31836255)
chr4 (72-106)||(45235733-45235767)
chr4 (27-92)||(36450742-36450807)
chr4 (57-106)||(37275088-37275137)
chr4 (53-106)||(47376852-47376905)
chr4 (58-106)||(25371545-25371593)
chr4 (58-101)||(3847891-3847934)
chr4 (72-106)||(26611056-26611090)
chr4 (58-107)||(30478308-30478357)
chr4 (57-106)||(30808621-30808670)
chr4 (58-107)||(42544487-42544536)
chr4 (58-107)||(47199395-47199444)
chr4 (58-107)||(48013316-48013365)
[»] chr7 (24 HSPs)
chr7 (10-106)||(17145622-17145718)
chr7 (10-106)||(668179-668275)
chr7 (10-107)||(38071897-38071994)
chr7 (10-107)||(38778853-38778950)
chr7 (10-107)||(4261548-4261645)
chr7 (10-107)||(37864259-37864356)
chr7 (10-106)||(38779515-38779611)
chr7 (10-106)||(17145824-17145920)
chr7 (14-104)||(7677765-7677855)
chr7 (29-106)||(37468976-37469053)
chr7 (10-107)||(41194512-41194608)
chr7 (10-106)||(669055-669151)
chr7 (10-102)||(4261209-4261301)
chr7 (10-102)||(7677421-7677513)
chr7 (10-106)||(38072243-38072339)
chr7 (49-107)||(37468909-37468967)
chr7 (58-101)||(42455040-42455083)
chr7 (72-105)||(668420-668453)
chr7 (57-107)||(29006346-29006396)
chr7 (73-107)||(37864091-37864125)
chr7 (59-109)||(44909360-44909410)
chr7 (58-99)||(20890206-20890247)
chr7 (59-107)||(45887981-45888029)
chr7 (59-107)||(47331954-47332002)
[»] chr6 (23 HSPs)
chr6 (10-106)||(33480580-33480676)
chr6 (10-106)||(3543015-3543111)
chr6 (10-107)||(7193337-7193434)
chr6 (10-111)||(33018368-33018469)
chr6 (10-106)||(22579935-22580031)
chr6 (10-104)||(3542816-3542910)
chr6 (10-104)||(33479698-33479792)
chr6 (10-106)||(15083270-15083366)
chr6 (11-102)||(22582432-22582523)
chr6 (11-102)||(22587263-22587354)
chr6 (10-106)||(33018167-33018263)
chr6 (10-101)||(15082402-15082493)
chr6 (10-107)||(7193530-7193627)
chr6 (58-106)||(7531829-7531877)
chr6 (72-106)||(15082638-15082672)
chr6 (72-106)||(22580597-22580631)
chr6 (72-106)||(22587083-22587117)
chr6 (72-106)||(33479938-33479972)
chr6 (58-111)||(14337557-14337610)
chr6 (57-106)||(24125972-24126021)
chr6 (53-106)||(24126713-24126766)
chr6 (58-107)||(7532440-7532489)
chr6 (58-106)||(9574571-9574619)
[»] chr5 (21 HSPs)
chr5 (10-106)||(15183969-15184065)
chr5 (12-107)||(8204119-8204214)
chr5 (10-107)||(33002768-33002865)
chr5 (10-107)||(12190110-12190207)
chr5 (14-106)||(686417-686508)
chr5 (10-105)||(687300-687395)
chr5 (10-107)||(8040194-8040291)
chr5 (10-106)||(15183088-15183185)
chr5 (14-107)||(33001931-33002024)
chr5 (10-107)||(36626582-36626679)
chr5 (10-107)||(8040396-8040493)
chr5 (59-106)||(39950404-39950451)
chr5 (72-106)||(686667-686701)
chr5 (72-106)||(39950446-39950480)
chr5 (58-107)||(13654932-13654981)
chr5 (72-106)||(15183780-15183814)
chr5 (57-106)||(4608589-4608638)
chr5 (10-107)||(33283975-33284072)
chr5 (60-101)||(39167442-39167483)
chr5 (58-106)||(26688166-26688214)
chr5 (58-106)||(26957897-26957945)
[»] chr3 (38 HSPs)
chr3 (10-106)||(19132563-19132659)
chr3 (10-109)||(32490147-32490246)
chr3 (10-107)||(36750389-36750486)
chr3 (10-106)||(19132764-19132860)
chr3 (10-105)||(38922744-38922839)
chr3 (10-105)||(45242067-45242162)
chr3 (10-106)||(32489946-32490042)
chr3 (10-106)||(45242939-45243035)
chr3 (10-107)||(41756384-41756481)
chr3 (10-106)||(38923617-38923713)
chr3 (10-104)||(3970994-3971088)
chr3 (10-104)||(3998793-3998887)
chr3 (10-107)||(41755498-41755595)
chr3 (10-107)||(44686254-44686350)
chr3 (10-107)||(44687115-44687212)
chr3 (10-107)||(3971854-3971951)
chr3 (10-107)||(3997927-3998024)
chr3 (10-106)||(52491891-52491982)
chr3 (10-101)||(36750050-36750141)
chr3 (10-108)||(52492231-52492329)
chr3 (59-106)||(31556217-31556264)
chr3 (57-106)||(49757181-49757230)
chr3 (60-106)||(17226968-17227014)
chr3 (72-106)||(38923438-38923472)
chr3 (72-106)||(45242307-45242341)
chr3 (22-67)||(45500512-45500557)
chr3 (59-106)||(21811879-21811926)
chr3 (59-106)||(31556188-31556235)
chr3 (57-108)||(37105076-37105127)
chr3 (72-106)||(3971233-3971267)
chr3 (72-106)||(3998614-3998648)
chr3 (57-107)||(14667296-14667345)
chr3 (72-106)||(41755729-41755763)
chr3 (57-107)||(49756274-49756324)
chr3 (65-106)||(17227955-17227996)
chr3 (58-107)||(43638078-43638127)
chr3 (58-106)||(39901846-39901894)
chr3 (57-105)||(42145277-42145325)
[»] chr1 (34 HSPs)
chr1 (10-106)||(16270207-16270303)
chr1 (9-106)||(9948838-9948935)
chr1 (10-106)||(23440817-23440913)
chr1 (14-107)||(43737934-43738027)
chr1 (10-107)||(48972397-48972494)
chr1 (10-107)||(51974436-51974533)
chr1 (10-106)||(16271100-16271196)
chr1 (10-106)||(193850-193946)
chr1 (10-106)||(23440617-23440713)
chr1 (10-106)||(51975179-51975275)
chr1 (10-106)||(9947995-9948091)
chr1 (10-106)||(43737729-43737825)
chr1 (10-106)||(48971705-48971801)
chr1 (10-106)||(50827043-50827138)
chr1 (10-104)||(38931199-38931293)
chr1 (10-106)||(38930312-38930408)
chr1 (12-77)||(27888700-27888765)
chr1 (10-92)||(6076819-6076901)
chr1 (29-92)||(6075988-6076051)
chr1 (10-82)||(31390775-31390847)
chr1 (58-107)||(51987826-51987875)
chr1 (57-107)||(1012546-1012596)
chr1 (72-106)||(16270901-16270935)
chr1 (72-106)||(38930574-38930608)
chr1 (10-88)||(47334217-47334295)
chr1 (58-107)||(35616775-35616824)
chr1 (58-106)||(8560839-8560887)
chr1 (22-70)||(40649531-40649579)
chr1 (58-106)||(51988464-51988512)
chr1 (27-106)||(47334869-47334948)
chr1 (72-106)||(51974979-51975013)
chr1 (58-106)||(194701-194749)
chr1 (58-106)||(37874064-37874112)
chr1 (60-108)||(48869767-48869815)
[»] chr8 (22 HSPs)
chr8 (10-108)||(34992216-34992314)
chr8 (10-107)||(5034897-5034994)
chr8 (10-107)||(41859309-41859406)
chr8 (10-106)||(32536708-32536804)
chr8 (10-99)||(37639718-37639807)
chr8 (10-106)||(5035228-5035324)
chr8 (10-106)||(34992015-34992111)
chr8 (12-107)||(41860050-41860145)
chr8 (10-106)||(38023624-38023720)
chr8 (10-107)||(32537440-32537534)
chr8 (58-107)||(61453-61502)
chr8 (58-106)||(1365829-1365877)
chr8 (72-107)||(44098435-44098470)
chr8 (58-107)||(25876520-25876569)
chr8 (58-106)||(39254787-39254835)
chr8 (72-106)||(32536946-32536980)
chr8 (57-106)||(27918046-27918095)
chr8 (73-106)||(38023857-38023890)
chr8 (58-107)||(39255752-39255801)
chr8 (58-107)||(44751607-44751656)
chr8 (58-106)||(62240-62288)
chr8 (58-106)||(42345166-42345214)
[»] scaffold0311 (1 HSPs)
scaffold0311 (10-108)||(112-210)
[»] scaffold0041 (2 HSPs)
scaffold0041 (10-106)||(27221-27317)
scaffold0041 (17-106)||(27534-27623)
[»] scaffold0332 (1 HSPs)
scaffold0332 (10-106)||(9210-9306)
[»] scaffold1037 (1 HSPs)
scaffold1037 (58-107)||(2899-2948)
[»] scaffold1031 (1 HSPs)
scaffold1031 (58-107)||(3018-3067)


Alignment Details
Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 39292956 - 39292830
Alignment:
Q  107 tcactaatattttgtaagaggttttctctttctctaaacttcaaatagacttttctgtaaaatttatttcctccagcaaagattttcctttctcttttat 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  39292956 tcactaatattttgtaagaggttttctctttctctaaacttcaaatagacttttctgcaaaatttatttcctccaccaaagattttcctttctcttttat 39292857  T
Q  207 cttctaaccaacctttttaggaattca 233  Q
    ||||||| |||||||||||||||||||    
T  39292856 cttctaatcaacctttttaggaattca 39292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 21471113 - 21471016
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21471113 agagtatgataggaatatgttcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 21471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 37548094 - 37547997
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  37548094 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 37547997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 21471906 - 21472002
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21471906 agagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 13134415 - 13134318
Alignment:
Q  9 tagagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  13134415 tagagtatgatagaaatatgttcctcatttaatttaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 38834588 - 38834685
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  38834588 agagtatgatagaaatatgttcttcatttaatctaatggacatgatcaactttcccacggtaggaaaaaactctcctttcccaaattaaatggcacct 38834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 4479654 - 4479750
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4479654 agagtatgataagaatatgttcctcatttaatctaatggacatgattaactttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 14573951 - 14574048
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  14573951 agagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcttatggtgggaaagaactctcctttcccaaattaaatggcacct 14574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 14573357 - 14573261
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  14573357 agagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 38834483 - 38834384
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctca 109  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||||||||||||||||||||    
T  38834483 agagtatgataaaaatatgttcctcatttaatctaatggacatgatcaactttcccgtggtgggaaagtaccctcctttcccaaattaaatggcacctca 38834384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 33433160 - 33433208
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  33433160 actttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 1164790 - 1164825
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||||||||||||||||||||||||    
T  1164790 ggaaagaactctcctttcccaaattaaatggcacct 1164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 5276513 - 5276463
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacctc 108  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||| ||||||    
T  5276513 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacctc 5276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 40992271 - 40992222
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||||    
T  40992271 aactttcccatggtaggaaaaaacaaacctttcccaaattaaatggcacc 40992222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 4478899 - 4478850
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| | |||||||| | | |||||||||||||||||||||||    
T  4478899 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 4478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| | |||||||| | | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 17069153 - 17069121
Alignment:
Q  74 aaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||| ||||||||||||||||    
T  17069153 aaagaactctcctttctcaaattaaatggcacc 17069121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 11417783 - 11417686
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11417783 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 11417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11417889 - 11417985
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  11417889 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 31836412 - 31836511
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctca 109  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31836412 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttctcaaattaaatggcacctca 31836511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 21166327 - 21166424
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  21166327 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttctcaaattaaatggcacct 21166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 26611235 - 26611332
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  26611235 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 29651284 - 29651381
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29651284 agagtatgataggaatatgttcctcatttaatctaatagatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 29651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 10424219 - 10424123
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  10424219 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 36865669 - 36865765
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  36865669 agagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 9939323 - 9939420
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||| |||||||||||||||||    
T  9939323 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactcccctttctcaaattaaatggcacct 9939420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 10425011 - 10425108
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  10425011 agagtatgataggaatatattcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 10425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 38143689 - 38143781
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatgg 102  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  38143689 agagtatgataggaatatgttcctcatttaatctaatggacatgaccaactttcccatggtgggaaagaactctcatttcccaaattaaatgg 38143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 26610441 - 26610350
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatg 101  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  26610441 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaattttcccatggtgggaaagaactctcatttcccaaattaaatg 26610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 38694906 - 38695002
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||| ||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  38694906 agagtatgatatgaatattttcctcatttaatctaatagacatgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 45230461 - 45230365
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  45230461 agagtatgataggaatatgttcctcatttaatctaatgaatatgatcaactttcccatggtgggaaagaactctcttttcccgaattaaatggcacc 45230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 45235916 - 45236008
Alignment:
Q  14 tatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  45235916 tatgatagaaatatgttcctcatttaatctaatggacatgattaactttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 29650511 - 29650416
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcac 105  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | | | ||||||||||| ||||||||||||||||||||    
T  29650511 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccaagatggaaaagaactctcatttcccaaattaaatggcac 29650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 36864913 - 36864818
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcac 105  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||||    
T  36864913 agagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttctcatggtgagaaagaactctcctttcccaaattaaatagcac 36864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 39522471 - 39522374
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||| |||||    
T  39522471 agagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgaaaaagaactatcctttcccaaattaaatgacacct 39522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 21165543 - 21165447
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||| | ||||||||||||||||||||||    
T  21165543 agagtatgatagaaatatgttcctcatttaatcaaatggacatgatcaactttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 38694798 - 38694702
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||    
T  38694798 agagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatgctgggaaagaactctccttttccaaattaaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 39523242 - 39523319
Alignment:
Q  29 ttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  39523242 ttcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 38143584 - 38143506
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctccttt 88  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||    
T  38143584 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctccttt 38143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 31835244 - 31835148
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| |||||||||| | ||||  ||||||||||||||||    
T  31835244 agagtatgataggaatatgttcctcgtttaatctaatggacataatcaactttcctatggtgggaaagaactatactttttcaaattaaatggcacc 31835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 9939218 - 9939124
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||   ||| |||||||||| ||||||||||||||||| |||||    
T  9939218 agagtatgataagaatatgtttctcatttaatctaatggacatgatcaactttccca---tagaaaagaactctactttcccaaattaaatgacacct 9939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 47198653 - 47198595
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacctcactaatat 116  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||    
T  47198653 actttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacctcacttatat 47198595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 47377597 - 47377648
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctc 108  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  47377597 aactttcccatggtgggaaacaactcccctttcccaaattaaatggcacctc 47377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 25970201 - 25970120
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttccca 92  Q
    |||||||||||   || |||| |||||||| |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  25970201 agagtatgataaagatttgtttctcatttaatctaatggacat-atcaactttcccatggtgggaaacaactcccctttccca 25970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 55159228 - 55159186
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaat 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  55159228 actttcccatggtaggaaagaagtctcctttcccaaattaaat 55159186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatg 101  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 10424385 - 10424419
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  10424385 ggaaagaactctcctttcccaaattaaatggcacc 10424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 11806187 - 11806129
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatg 68  Q
    |||||| ||||  ||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  11806187 agagtaggataaaaatgtgttcctcatttaatctaatggacatgattaactttcccatg 11806129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 21166171 - 21166137
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  21166171 ggaaagaactctcctttcccaaattaaatggcacc 21166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 28684231 - 28684281
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||| ||||||||||| || ||||||||||||||||||||| |||||    
T  28684231 aactttcctatggtaggaaaaaagtctcctttcccaaattaaatgtcacct 28684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 29650655 - 29650689
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  29650655 ggaaagaactctcctttcccaaattaaatggcacc 29650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 31836255 - 31836221
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  31836255 ggaaagaactctcctttcccaaattaaatggcacc 31836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 45235767 - 45235733
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  45235767 ggaaagaactctcctttcccaaattaaatggcacc 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 36450807 - 36450742
Alignment:
Q  27 tgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttccca 92  Q
    |||| |||||||| || ||||||||| ||||||||||||||||| | ||| ||||| |||||||||    
T  36450807 tgttactcatttaatccaatggacataatcaactttcccatggtggaaaacaactcccctttccca 36450742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 37275137 - 37275088
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||| |||||| |||||||| ||||||||||||||||||| ||||||    
T  37275137 aactttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 47376905 - 47376852
Alignment:
Q  53 gatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||| | ||||| ||||| |||||||||||||||||| ||||    
T  47376905 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||| |||||| |||||||| ||||||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatg 101  Q
    ||||||||||||| ||||| || |||||||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 26611090 - 26611056
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||| |||||||||||||||||||||    
T  26611090 ggaaagaactctcatttcccaaattaaatggcacc 26611056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 30478357 - 30478308
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| | |||||||| | | |||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 30478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 30808670 - 30808621
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||| ||||| |||||||||||||||  ||||||| ||||    
T  30808670 aactttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 42544536 - 42544487
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||| ||||||| ||||| || ||| |||||||||||||||||||||||    
T  42544536 acttttccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 42544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 47199395 - 47199444
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||| ||||| |||||||| |||| |||||||||||||||| |||||    
T  47199395 actttcctatggtgggaaagaagtctcttttcccaaattaaatgccacct 47199444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 48013365 - 48013316
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| | |||||||| | | |||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 48013316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 17145718 - 17145622
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17145718 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 668275 - 668179
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  668275 agagtatgataggaatatgttcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 38071994 - 38071897
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  38071994 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcctaaattaaatggcacct 38071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 38778950 - 38778853
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38778950 agagtatgataggaatatgctcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 38778853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 4261548 - 4261645
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  4261548 agagtatgatagaaatatgttcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 4261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 37864259 - 37864356
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  37864259 agagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactcttatttcccaaattaaatggcacct 37864356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 38779515 - 38779611
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38779515 agagtattataagaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 17145824 - 17145920
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  17145824 agagtatgataggaatatgttattcatttaatctaatggacatgatcaactttcccatagtaaaaaagaactctcctttcccaaattaaatggcacc 17145920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 7677765 - 7677855
Alignment:
Q  14 tatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggca 104  Q
    ||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7677765 tatgataagaatgtgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggca 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 37468976 - 37469053
Alignment:
Q  29 ttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37468976 ttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 41194608 - 41194512
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| |||||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41194608 agagtatgataagaatatgttcctcattaatt-taatggacatgattaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 669055 - 669151
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||    
T  669055 agagtatgataggaatatgttcctcatttgatctaatggatatgatcaactttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 4261301 - 4261209
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatgg 102  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4261301 agagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtagaaaagaactctcctttcctaaattaaatgg 4261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 7677513 - 7677421
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatgg 102  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||    
T  7677513 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttttcatggtgggaaagaattctcctttcccaaattaaatgg 7677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 38072243 - 38072339
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||| | ||| ||||||| |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  38072243 agagtatgataagaatgtattcatcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcatttcccaaattaaatggcacc 38072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 37468967 - 37468909
Alignment:
Q  49 acatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37468967 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 42455083 - 42455040
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatg 101  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  42455083 actttcccatggtagaaaagaagtctcctttcccaaattaaatg 42455040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 668420 - 668453
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcac 105  Q
    ||||||||||||||||||||||||||||||||||    
T  668420 ggaaagaactctcctttcccaaattaaatggcac 668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 29006396 - 29006346
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||| ||||| |||   ||||||||||||||||||||||||    
T  29006396 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacct 29006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 107
Target Start/End: Complemental strand, 37864125 - 37864091
Alignment:
Q  73 gaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||| |||||||||||||||||||||||||    
T  37864125 gaaagaactttcctttcccaaattaaatggcacct 37864091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 44909360 - 44909410
Alignment:
Q  59 ctttcccatggtaggaaagaactctcctttcccaaattaaatggcacctca 109  Q
    |||||||||||| ||||| ||||  |||||||||||||||| |||||||||    
T  44909360 ctttcccatggtgggaaaaaacttacctttcccaaattaaacggcacctca 44909410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaa 99  Q
    ||||||||||||| ||||| |||| |||||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 45887981 - 45888029
Alignment:
Q  59 ctttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||| ||||  |||||||||||||||||| |||||    
T  45887981 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacct 45888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 47331954 - 47332002
Alignment:
Q  59 ctttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||| ||||  |||||||||||||||||| |||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacct 47332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 33480580 - 33480676
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33480580 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

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Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 3543015 - 3543111
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  3543015 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 3543111  T

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Target: chr6; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 7193434 - 7193337
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7193434 agagtatgataagaatatgttcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 7193337  T

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Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 33018368 - 33018469
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctca 109  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  33018368 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaacgacacctca 33018467  T
Q  110 ct 111  Q
    ||    
T  33018468 ct 33018469  T

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Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 22580031 - 22579935
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22580031 agagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

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Target: chr6; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 3542910 - 3542816
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggca 104  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  3542910 agagtatgataggaatatgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 3542816  T

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Target: chr6; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 33479792 - 33479698
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggca 104  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  33479792 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 33479698  T

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Target: chr6; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 15083270 - 15083366
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  15083270 agagtatgataggaatatgttcctcatttaatctaatagatatgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

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Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 22582432 - 22582523
Alignment:
Q  11 gagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatgg 102  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22582432 gagtataatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22582523  T

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Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 22587263 - 22587354
Alignment:
Q  11 gagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatgg 102  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22587263 gagtataatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22587354  T

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Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 33018263 - 33018167
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  33018263 agagtatgataaaaatatgttcctcatttaatctaatggacatgatcaactttccaatgatgggaaagaactctcctttcccaaattaaatggcacc 33018167  T

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Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 15082493 - 15082402
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatg 101  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||    
T  15082493 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatg 15082402  T

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Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 7193530 - 7193627
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| | | |||||||||| ||||| |||||||||||||||||    
T  7193530 agagtatgatagaaatatattcctcatttaatctaatggatatgatcaactttcccatgatggaaaagaactctactttctcaaattaaatggcacct 7193627  T

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Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 15082638 - 15082672
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  15082638 ggaaagaactctcctttcccaaattaaatggcacc 15082672  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 22580631 - 22580597
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  22580631 ggaaagaactctcctttcccaaattaaatggcacc 22580597  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 22587117 - 22587083
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  22587117 ggaaagaactctcctttcccaaattaaatggcacc 22587083  T

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Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 33479938 - 33479972
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  33479938 ggaaagaactctcctttcccaaattaaatggcacc 33479972  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 14337557 - 14337610
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacctcact 111  Q
    ||||||||||| | |||||||| | | |||||||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacctcact 14337610  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 24126021 - 24125972
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||| ||||    
T  24126021 aactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 24126713 - 24126766
Alignment:
Q  53 gatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||| | ||||| ||||| |||||||||||||||||| ||||    
T  24126713 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 24126766  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 7532440 - 7532489
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||   |||||| ||||||||||||||||||||| |||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacct 7532489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 9574571 - 9574619
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||| ||||| |||||||| ||||||||||||| ||||||| ||||    
T  9574571 actttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

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Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 15183969 - 15184065
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15183969 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

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Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 8204214 - 8204119
Alignment:
Q  12 agtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8204214 agtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 8204119  T

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Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 33002768 - 33002865
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  33002768 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacct 33002865  T

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Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 12190110 - 12190207
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  12190110 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcttttcccaaattaaatggcacct 12190207  T

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Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 686508 - 686417
Alignment:
Q  14 tatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  686508 tatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaa-aactctcctttcccaaattaaatggcacc 686417  T

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Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 687300 - 687395
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcac 105  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| || | ||||||||||||||||||||||||||||||||    
T  687300 agagtatgataggaatatgttcctcatttaatctaatggacataatcaacttttccatagtggaaaagaactctcctttcccaaattaaatggcac 687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 8040291 - 8040194
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||    
T  8040291 agagtatgataagaatatattcctcatttaatctaatggacatgatcaactttcccacgatgggaaagaactgtcctttcccaaattaaatggcacct 8040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 15183185 - 15183088
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaa-gaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| | |||||  |||||||||||||||||||||||||||||    
T  15183185 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttctcatgatgggaaataaactctcctttcccaaattaaatggcacc 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 33002024 - 33001931
Alignment:
Q  14 tatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||| |||| | ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  33002024 tatgataagaatgtattcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 33001931  T

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Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 36626582 - 36626679
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| |||||| ||||| ||||| | ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36626582 agagtatgataagaatatattccttatttaatataacggacatgatcaactttcccatggtgggaaagaactctcatttcccaaattaaatggcacct 36626679  T

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Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 8040396 - 8040493
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||| ||| |||||||| | |||||||||||||||||||||||||    
T  8040396 agagtatgatagaaatatgttccctatttaatctaatggacatgattaactttcccacggtgggaaagaaatttcctttcccaaattaaatggcacct 8040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  59 ctttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 686667 - 686701
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  686667 ggaaagaactctcctttcccaaattaaatggcacc 686701  T

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Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 39950446 - 39950480
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  39950446 ggaaagaactctcctttcccaaattaaatggcacc 39950480  T

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Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 13654981 - 13654932
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  13654981 actttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 15183814 - 15183780
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||| ||||||||||    
T  15183814 ggaaagaactctcctttcccaaatcaaatggcacc 15183780  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 4608589 - 4608638
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||| ||||| |||  |||||||||| |||||||||||||    
T  4608589 aactttcccatggtgggaaataacattcctttcccagattaaatggcacc 4608638  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 33283975 - 33284072
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||  ||| ||||||||||||  ||||| || ||  |  | |||||||||||| ||| | ||||  ||||||||||||||||||||||||    
T  33283975 agagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaattaaatggcacct 33284072  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  60 tttcccatggtaggaaagaactctcctttcccaaattaaatg 101  Q
    ||||||||| | |||||||| |||||||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| | |||||||| | | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| | |||||||| | | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

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Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 19132659 - 19132563
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19132659 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatagtaggaaagaactctcctttcccaaattaaatggcacc 19132563  T

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Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 32490147 - 32490246
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctca 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32490147 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacctca 32490246  T

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Target: chr3; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 36750389 - 36750486
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36750389 agagtatgatagaaatatgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 36750486  T

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Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 19132764 - 19132860
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  19132764 agagtatgataagaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactttcctttcccaaattaaatggcacc 19132860  T

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Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 38922839 - 38922744
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcac 105  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38922839 agagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcccatggtaggaaataactctcctttcccaaattaaatggcac 38922744  T

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Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 45242162 - 45242067
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcac 105  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  45242162 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatggcac 45242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 32490042 - 32489946
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  32490042 agagtatgatagaaatatgttccttatttaatctaatggacatgatcaactttcccatggtggaaaagaattctcctttcccaaattaaatggcacc 32489946  T

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Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 45242939 - 45243035
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  45242939 agagtatgataggaatatgttcctcatttaatctaatagatatgatcaactttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 41756384 - 41756481
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||| || ||||||| |||||    
T  41756384 agagtatgataggaatatgttcctcatttaatctaatgaacatgatcaactttcccatgatgggaaagaactctcctttcctaacttaaatgacacct 41756481  T

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Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 38923617 - 38923713
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||||||||| ||||||| |||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  38923617 agagtatgatagaaatatgttcctcatttaatctaatgaacattatcaacttttccatggtgggaaagaactctcatttcccaaattaaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 3971088 - 3970994
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggca 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   ||| ||||||| |||||||||||||||||||    
T  3971088 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 3998793 - 3998887
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggca 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   ||| ||||||| |||||||||||||||||||    
T  3998793 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3998887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 41755595 - 41755498
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||| |||| |||||| ||||| |||||||||||||||||||||||| |||||    
T  41755595 agagtatgatagaaatatgttcctcatttaatctaatgaacatgatcaattttctcatggtgggaaaaaactctcctttcccaaattaaatgacacct 41755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 44686350 - 44686254
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| | ||| ||||||||||| ||||||||||||||||||    
T  44686350 agagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttctcatggt-gaaaaaaactctccttttccaaattaaatggcacct 44686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 44687115 - 44687212
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||| ||||||||||| ||||||| | |||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||    
T  44687115 agagtatgataggaatattttcctcatttaatctaatgaatatgatcaacttttccatggtggaaaagaattctcctttcccaaattaaatggcacct 44687212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 3971854 - 3971951
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||  | |||||||||| || ||||| ||||||||||||||||    
T  3971854 agagtatgatagaaatatgttcctcatttaatctaatggatatgatcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 3998024 - 3997927
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||  | |||||||||| || ||||| ||||||||||||||||    
T  3998024 agagtatgatagaaatatgttcctcatttaatctaatggatatgatcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 52491982 - 52491891
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||| ||     ||||||||||||||||||||||||||||||||||||    
T  52491982 agagtatgatagaaatatgttccttatttaatctaatggacatgatcaacttttcc-----aggaaagaactctcctttcccaaattaaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 36750141 - 36750050
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatg 101  Q
    ||||||||||| |||| | ||||||||||| ||||||| |||||||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  36750141 agagtatgataagaatgtattcctcatttaatctaatgaacatgatcaacttttccatggtggaaaagaactctcctttcccaaattaaatg 36750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 52492231 - 52492329
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctc 108  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||| ||||||| ||||||| | ||||||||||| |||||||||||||||| ||||||    
T  52492231 agagtatgataagaatgtattcctcatttaatctaatggacatgaacaacttttccatggtggaaaagaactctcatttcccaaattaaatgacacctc 52492329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  59 ctttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 49757181 - 49757230
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  49757181 aactttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  60 tttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 38923472 - 38923438
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  38923472 ggaaagaactctcctttcccaaattaaatggcacc 38923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 45242307 - 45242341
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  45242307 ggaaagaactctcctttcccaaattaaatggcacc 45242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 45500557 - 45500512
Alignment:
Q  22 gaatatgttcctcatttagtctaatggacatgatcaactttcccat 67  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||    
T  45500557 gaatgtgttcctcatttaatctaatggacataatcaactttcccat 45500512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 21811926 - 21811879
Alignment:
Q  59 ctttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||| || |||| |||||||||||||| ||||||    
T  21811926 ctttcccatggtaggaaaaaagtctcatttcccaaattaaacggcacc 21811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 31556235 - 31556188
Alignment:
Q  59 ctttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||    
T  31556235 ctttcccatcatgggaaagaactctccttttccaaattaaatggcacc 31556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 37105076 - 37105127
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctc 108  Q
    |||||||||||||| ||||| || |||| |||||||||||||| ||||||||    
T  37105076 aactttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacctc 37105127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 3971233 - 3971267
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||    
T  3971233 ggaaagaactctcctttcccaaattaaatgacacc 3971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 3998648 - 3998614
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||    
T  3998648 ggaaagaactctcctttcccaaattaaatgacacc 3998614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 14667345 - 14667296
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||| ||||| || ||||||||||||||||||| |||||||    
T  14667345 aactttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacct 14667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 41755729 - 41755763
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||| ||||||||||||||||||||||||||||    
T  41755729 ggaaagtactctcctttcccaaattaaatggcacc 41755763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 49756324 - 49756274
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||| ||||| |||  |||||| ||||||||||||||||||    
T  49756324 aactttcccatggtgggaaataacattccttttccaaattaaatggcacct 49756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 17227955 - 17227996
Alignment:
Q  65 catggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||| |||||||| ||||||||||||||||||||| ||||    
T  17227955 catggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 43638078 - 43638127
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| | |||||||| | | |||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacct 43638127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 39901894 - 39901846
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||| ||||||||||||| |||||||  ||||| ||||||    
T  39901894 actttcccatggtgggaaagaactctcatttcccaggttaaacggcacc 39901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 42145277 - 42145325
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcac 105  Q
    |||||||| ||||| | ||| || |||||||||||||||||||||||||    
T  42145277 aactttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 16270303 - 16270207
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16270303 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 9948838 - 9948935
Alignment:
Q  9 tagagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9948838 tagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23440817 - 23440913
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23440817 agagtatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 43737934 - 43738027
Alignment:
Q  14 tatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  43737934 tatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 48972397 - 48972494
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  48972397 agagtatgataggaatatgtttctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggcacct 48972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 51974533 - 51974436
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51974533 agagtatgataggaatatgttcttcatttaatctaatagacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 51974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 16271100 - 16271196
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||||||    
T  16271100 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgagaaagaactctcctttcctaaattaaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 193946 - 193850
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  193946 agagtatgataagaatatgttcctcatttaatttaatggacatgattaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 23440713 - 23440617
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  23440713 agagtatgataggaatatgtttctcatttaatctaatggacataatcaacttttccatagttggaaagaactctcctttcccaaattaaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 51975179 - 51975275
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||    
T  51975179 agagtatgataggaatatgttcctcatttaatctaattgacatgatcaactttcccatagtgaaaaagaactctcctttcccaaattaaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 9948091 - 9947995
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||    
T  9948091 agagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatggtgggaaagaacttttctttcccaaattaaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 43737825 - 43737729
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  43737825 agagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 48971801 - 48971705
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||| ||||||  | ||||||||||||| ||| || |||||||||||||||||||||||||||||| ||||    
T  48971801 agagtatgataggaatatgttcctcatttaatctaatttatatgatcaactttctcattgtgggaaagaactctcctttcccaaattaaatgacacc 48971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 50827043 - 50827138
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||  |||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  50827043 agagtatgataaaaatatgtttctcatttaatctaatggacatgatcaactttcccatggtgggaaa-aactctcctttctcaaattaaatggcacc 50827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 38931199 - 38931293
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggca 104  Q
    |||||||||||| |||||||| || ||||| | ||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  38931199 agagtatgatagaaatatgtttcttatttaatttaatggatatgatcaactttcccatggtagaaaagaactcttctttcccaaattaaatggca 38931293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 38930408 - 38930312
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||| ||||    
T  38930408 agagtatgataggaatatgttccttatttaatttaatggatatgatcaactttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 27888765 - 27888700
Alignment:
Q  12 agtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaag 77  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  27888765 agtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaag 27888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 6076819 - 6076901
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttccca 92  Q
    ||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||| || ||||||||||||| |||||||    
T  6076819 agagtatgataggaatatgttactcatttaatataatggacatgatcaacttttccatagtgggaaagaactctcatttccca 6076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 6076051 - 6075988
Alignment:
Q  29 ttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttccca 92  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  6076051 ttcctcatttaatctaatggacatgatcaactttctcatggtagaaaagaactctcctttccca 6075988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 31390775 - 31390847
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactc 82  Q
    |||||| ||||  ||| ||||||||||||| || ||||||||| ||||||||||||||||| |||||||||||    
T  31390775 agagtaggataaaaatgtgttcctcatttattccaatggacataatcaactttcccatggtgggaaagaactc 31390847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 1012596 - 1012546
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||||||| ||||| || ||||||||||||||||||| |||||||    
T  1012596 aactttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacct 1012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 16270935 - 16270901
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  16270935 ggaaagaactctcctttcccaaattaaatggcacc 16270901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 38930574 - 38930608
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||||||||||    
T  38930574 ggaaagaactctcctttcccaaattaaatggcacc 38930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 47334295 - 47334217
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctccttt 88  Q
    |||||| |||| | || |||| |||||||| |||||||||||| |||||||||||||| || ||||| ||||| |||||    
T  47334295 agagtaggataaggatttgtttctcatttaatctaatggacataatcaactttcccattgtgggaaacaactccccttt 47334217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 35616775 - 35616824
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||| |||||    
T  35616775 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 35616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| | |||||||| ||||||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 40649531 - 40649579
Alignment:
Q  22 gaatatgttcctcatttagtctaatggacatgatcaactttcccatggt 70  Q
    |||| |||||| |||||| |||||||||||| |||||||||||||||||    
T  40649531 gaatgtgttccacatttaatctaatggacattatcaactttcccatggt 40649579  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 47334869 - 47334948
Alignment:
Q  27 tgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||| |||||||| || ||||||||| ||||||||||| ||||| ||||| ||||| | ||||||| | |||||| ||||    
T  47334869 tgttactcatttaatccaatggacataatcaactttcctatggtgggaaacaactcccttttcccatactaaatgccacc 47334948  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 51975013 - 51974979
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||| |||||||||||||||||||||||||    
T  51975013 ggaaagaaccctcctttcccaaattaaatggcacc 51974979  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 194701 - 194749
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| | |||||||| | | ||||||||||||||||||||||    
T  194701 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 37874112 - 37874064
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||| |||||||| |||| |||||||| ||||||| ||||    
T  37874112 actttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 48869815 - 48869767
Alignment:
Q  60 tttcccatggtaggaaagaactctcctttcccaaattaaatggcacctc 108  Q
    ||||||||||| | |||||| ||||||||||||| ||||||| ||||||    
T  48869815 tttcccatggtggaaaagaagtctcctttcccaagttaaatgtcacctc 48869767  T

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Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 34992216 - 34992314
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctc 108  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  34992216 agagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 34992314  T

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Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 5034994 - 5034897
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  5034994 agagtatgatatgaatatgttcctcattcaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 5034897  T

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Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 41859406 - 41859309
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41859406 agagtatgatatgaatatgttcttcatttaatctaacggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41859309  T

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Target: chr8; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 32536804 - 32536708
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  32536804 agagtatgataggaatatgttccccatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcatttcctaaattaaatggcacc 32536708  T

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Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 37639807 - 37639718
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaa 99  Q
    ||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37639807 agagtatcataggaatatgttcctcatttaatctaatgaatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

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Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 5035228 - 5035324
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  5035228 agagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctttcccaaattaaatggcacc 5035324  T

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Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 34992111 - 34992015
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| | ||| ||||||| |||||||||||||||||||||    
T  34992111 agagtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatggtggaaaataactctcgtttcccaaattaaatggcacc 34992015  T

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Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 41860050 - 41860145
Alignment:
Q  12 agtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |||  ||| |||||| |||||||||||||||||||||||    
T  41860050 agtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatagtaaaaaataactcttctttcccaaattaaatggcacct 41860145  T

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Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 38023720 - 38023624
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||| | | |||||| ||||||||||||||||||||| ||||    
T  38023720 agagtatgatagaaatatgttcctcatttaatctaatgaacatgatcaacttttccatgatggaaaagaattctcctttcccaaattaaatgacacc 38023624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 32537440 - 32537534
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| |||||||||||| ||||| | ||||||||||||| ||||||| ||||   | ||||||||||| ||||||||||||||||| ||||    
T  32537440 agagtatgataagaatatgttccttatttaatataatggacatgattaactttctcatg---gaaaagaactctcatttcccaaattaaatggtacct 32537534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 61502 - 61453
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  61502 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 1365877 - 1365829
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  1365877 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 44098435 - 44098470
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||||||||||||||||||||||||    
T  44098435 ggaaagaactctcctttcccaaattaaatggcacct 44098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 25876569 - 25876520
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||| ||||| || ||| |||||||||||||||||||||||    
T  25876569 actttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 39254835 - 39254787
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  39254835 actttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 32536946 - 32536980
Alignment:
Q  72 ggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||||||| |||||||||||||||||    
T  32536946 ggaaagaactctccttttccaaattaaatggcacc 32536980  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 27918046 - 27918095
Alignment:
Q  57 aactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||| ||||| || |||| |||||||||||||| ||||||    
T  27918046 aactttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 38023857 - 38023890
Alignment:
Q  73 gaaagaactctcctttcccaaattaaatggcacc 106  Q
    |||||||||||||||||||||||||||| |||||    
T  38023857 gaaagaactctcctttcccaaattaaatagcacc 38023890  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 39255752 - 39255801
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||| |||||||| |||| |||||||| ||||||| |||||    
T  39255752 actttcccatggtgggaaagaagtctcatttcccaagttaaatgccacct 39255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 44751656 - 44751607
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||| | |||||||| ||||||||||||| ||||||| |||||    
T  44751656 actttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 62240 - 62288
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||| ||||| |||||||| ||||||||| ||||||||||| ||||    
T  62240 actttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacc 62288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| | |||||||| | | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 112 - 210
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacctc 108  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  112 agagtatgataggaatatgttcctcatttaatctaatgaacataatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacctc 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 27317 - 27221
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  27317 agagtatgataagaatgtgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 27534 - 27623
Alignment:
Q  17 gataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  27534 gataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 9210 - 9306
Alignment:
Q  10 agagtatgataggaatatgttcctcatttagtctaatggacatgatcaactttcccatggtaggaaagaactctcctttcccaaattaaatggcacc 106  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||| |||||| |||||||   ||| ||||||||||| |||||||||||| ||||    
T  9210 agagtatgataagaatatgttcatcatttaatctaatggacatgatgaacttttccatggtgaaaaaaaactctccttttccaaattaaatgacacc 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1037 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1037
Description:

Target: scaffold1037; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 2899 - 2948
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||| |||||| | |||||||||| ||||||| ||||||    
T  2899 actttcccatggtagaaaagaagtatcctttcccagattaaatagcacct 2948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1031
Description:

Target: scaffold1031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 3018 - 3067
Alignment:
Q  58 actttcccatggtaggaaagaactctcctttcccaaattaaatggcacct 107  Q
    ||||||||||||||| |||||| | |||||||||| ||||||| ||||||    
T  3018 actttcccatggtagaaaagaagtatcctttcccagattaaatagcacct 3067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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