View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2844_low_6 (Length: 465)

Name: NF2844_low_6
Description: NF2844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2844_low_6
NF2844_low_6
[»] chr7 (15 HSPs)
chr7 (9-447)||(22070242-22070680)
chr7 (62-441)||(22063832-22064211)
chr7 (52-437)||(22100673-22101058)
chr7 (51-283)||(22081041-22081273)
chr7 (110-202)||(22064334-22064426)
chr7 (319-405)||(22081265-22081350)
chr7 (131-200)||(6864558-6864627)
chr7 (127-192)||(19645433-19645498)
chr7 (127-201)||(19325717-19325791)
chr7 (130-200)||(20133067-20133137)
chr7 (130-188)||(20352344-20352402)
chr7 (109-193)||(660601-660686)
chr7 (130-199)||(18982671-18982740)
chr7 (158-191)||(37426067-37426100)
chr7 (130-194)||(20374260-20374324)
[»] scaffold0867 (1 HSPs)
scaffold0867 (52-437)||(4174-4559)
[»] chr4 (3 HSPs)
chr4 (132-261)||(11970663-11970792)
chr4 (135-261)||(11981360-11981490)
chr4 (129-207)||(53775098-53775176)
[»] chr5 (4 HSPs)
chr5 (127-192)||(29642611-29642676)
chr5 (127-199)||(29597305-29597376)
chr5 (127-199)||(29820938-29821010)
chr5 (132-173)||(18964581-18964622)
[»] chr1 (1 HSPs)
chr1 (135-191)||(15961485-15961541)
[»] chr6 (1 HSPs)
chr6 (156-207)||(20770933-20770984)
[»] chr2 (2 HSPs)
chr2 (128-202)||(5436564-5436638)
chr2 (130-171)||(21021046-21021087)
[»] chr8 (1 HSPs)
chr8 (127-196)||(27618722-27618791)
[»] scaffold0649 (1 HSPs)
scaffold0649 (127-171)||(5690-5734)


Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 9 - 447
Target Start/End: Original strand, 22070242 - 22070680
Alignment:
Q  9 gagaagaacgatacactattattggaaagaaattannnnnnngaaagacggcgaattctctataatttgcgagataagatagcaaaaaggatcaatatgc 108  Q
    |||||||| |||||||||||||||  ||||||| |       |||||||| | |||||||||||||||||||||||||||||||||||||||| |||| |    
T  22070242 gagaagaaggatacactattattgacaagaaatgatttttttgaaagacgaccaattctctataatttgcgagataagatagcaaaaaggatccatatac 22070341  T
Q  109 cttggtcgtccaatgttcaggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaata 208  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||    
T  22070342 cttggtcgtccaatgttcaggattatgttgaaagtttgatttcttattgttgaaagtaagttcctttagaactatttacttgtttgaatttgtgctagta 22070441  T
Q  209 tatgtatgctatataataagctgtgtgatcattttcttatgatgactttgattattttattgaatgattatgtatgggctattgttaagggtttagaaat 308  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22070442 tatgtatgctatataataagttgtgtgatcattttcttatgatgactttgattattttattgaatgattatgtatgggctattgttaagggtttagaaat 22070541  T
Q  309 ttttgaaccaattatgtatttcatcatatagttttcaaaagttaaaaagaggattttacgttacttgtatgatcatgttcacatggtggctttgatttga 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22070542 ttttgaaccaattatgtatttcatcatatagttttcaaaagttaaaaagaggattttacgttacttgtatgatcatgttcacatggtggctttgatttga 22070641  T
Q  409 atttgattatacttgagtgattatgtatttggtcttgac 447  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22070642 atttgattatacttgagtgattatgtatttggtcttgac 22070680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 62 - 441
Target Start/End: Original strand, 22063832 - 22064211
Alignment:
Q  62 aattctctataatttgcgagataagatagcaaaaaggatcaatatgccttggtcgtccaatgttcaggattatgttgaaagtttgatttctaattgttga 161  Q
    |||||||||||||||| ||||||| | |||||||||||||||||| ||||||| |  ||||  |||| ||||||||||||| ||||||||| ||||||||    
T  22063832 aattctctataatttgagagataacagagcaaaaaggatcaatataccttggtggcacaattgtcagaattatgttgaaagcttgatttcttattgttga 22063931  T
Q  162 aagtaagttcctttacaacgatttacttgtttgaatttgtgctaatatatgtatgctatataataagctgtgtgatcattttcttatgatgactttgatt 261  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  22063932 aagtaagttcctctacaatgatttacttgtttgaatttgtgctaatatatgtatgctatataataagttgtgttatgattttcttatgatgactttgatt 22064031  T
Q  262 attttattgaatgattatgtatgggctattgttaagggtttagaaatttttgaaccaattatgtatttcatcatatagttttcaaaagttaaaaagagga 361  Q
     | ||||||||||||||||||| |||||||||||| | ||| ||||| |||||||||||||||||||||||| |||| ||||||||||||  ||||| ||    
T  22064032 gtattattgaatgattatgtatcggctattgttaacgatttggaaatctttgaaccaattatgtatttcatcttatatttttcaaaagtt--aaagatga 22064129  T
Q  362 ttttacgttacttgtatgatcatgttcacatggtggctttgatttgaatttgattata--cttgagtgattatgtatttggt 441  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||    
T  22064130 ttttacgttacttgtatgataatgttcacatggtggctttgatttgaatttgattatatttttgagtgattatgtacttggt 22064211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 52 - 437
Target Start/End: Original strand, 22100673 - 22101058
Alignment:
Q  52 aaagacggcgaattctctataatttgcgagataagatagcaaaaaggatcaatatgccttggtcgtccaatgttcaggattatgttgaaagtttgatttc 151  Q
    ||||||| | |||||||||||||||| ||||||| | || | ||| ||||||||| ||||||| |||||||| |||| ||||||||||||| ||||||||    
T  22100673 aaagacgaccaattctctataatttgagagataatagaggacaaatgatcaatataccttggtggtccaatggtcagaattatgttgaaagcttgatttc 22100772  T
Q  152 taattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaatatatgtatgctatataataagctgtgtgatcattttcttatgat 251  Q
    | |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  22100773 ttattgttgaaagtaagttcctttacaatgatttacttgtttgattttgtgctaatatatgtatgctatataataagttgtgtgatcattttcttatcat 22100872  T
Q  252 gactttgattattttattgaatgat-tatgtatgggctattgttaagggtttagaaatttttgaaccaattatgtatttcatcatatagttttcaaaagt 350  Q
    ||||| |||||| ||||||||| || | |||||  ||||||||||| ||||| ||||  ||||||||||||||| |||||||  |||| || ||||||||    
T  22100873 gacttcgattatattattgaataatgtttgtatcagctattgttaatggtttggaaa-ctttgaaccaattatgcatttcat-ttatatttatcaaaagt 22100970  T
Q  351 taaaaagaggattttacgttacttgtatgatcatgttcacatggtggctttgatttgaatttgattata--cttgagtgattatgtatt 437  Q
    | | |||| |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||   |||||||||||||||||    
T  22100971 t-agaagatgattttacattacttgtatgttcatgttcgcatggtggatttgatttgaatttgattatatttttgagtgattatgtatt 22101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 51 - 283
Target Start/End: Original strand, 22081041 - 22081273
Alignment:
Q  51 gaaagacggcgaattctctataatttgcgagataagatagcaaaaaggatcaatatgccttggtcgtccaatgttcaggattatgttgaaagtttgattt 150  Q
    |||||||| | |||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  22081041 gaaagacgaccaattctctataatttgagagataagagagcaaaaaagatcaatataccttggtcggccaatgttcatgattatgttgaaagtttgattt 22081140  T
Q  151 ctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaatatatgtatgctatataataagctgtgtgatcattttcttatga 250  Q
    || ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||    
T  22081141 cttatgtttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaatatatgtattttatataataagttgtgtgatcattttattatga 22081240  T
Q  251 tgactttgattattttattgaatgattatgtat 283  Q
    ||||||||||| | ||||||||| |||||||||    
T  22081241 tgactttgattgtattattgaattattatgtat 22081273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 22064334 - 22064426
Alignment:
Q  110 ttggtcgtccaatgttcaggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtg 202  Q
    ||||| || ||||| ||||||||||| |||||| ||| ||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  22064334 ttggtggtacaatggtcaggattatgatgaaaggttggtttcgtattgttgaaagtaagtttctttacgacgatttacttgtttgaatttgtg 22064426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 22081265 - 22081350
Alignment:
Q  319 attatgtatttcatcatatagttttcaaaagttaaaaagaggattttacgttacttgtatgatcatgttcacatggtggctttgatt 405  Q
    ||||||||||||||| |||| || ||||||||||||| ||  ||||||| |||||||||||||||||||| || |||||||||||||    
T  22081265 attatgtatttcatcttatatttatcaaaagttaaaa-gacaattttactttacttgtatgatcatgttctcacggtggctttgatt 22081350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 6864627 - 6864558
Alignment:
Q  131 ttatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttg 200  Q
    |||||||||||| ||| ||||   ||||||||||||||||||||| || | |||||||||||||||||||    
T  6864627 ttatgttgaaagcttggtttcgttttgttgaaagtaagttccttttcagctatttacttgtttgaatttg 6864558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 19645498 - 19645433
Alignment:
Q  127 aggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtt 192  Q
    |||||||||||||||||||| |||| | |||||||||||||||| |||||  | ||||||||||||    
T  19645498 aggattatgttgaaagtttggtttcaacttgttgaaagtaagtttctttattatgatttacttgtt 19645433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 19325791 - 19325717
Alignment:
Q  127 aggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgt 201  Q
    ||||||||||||||||||||  ||| | |||||||||||||||| |||||  | ||||||||||||  |||||||    
T  19325791 aggattatgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttccaatttgt 19325717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 20133137 - 20133067
Alignment:
Q  130 attatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttg 200  Q
    ||||||||||||||||| ||||  ||||||||||||||||| || |||||  ||||| || ||||||||||    
T  20133137 attatgttgaaagtttggtttcatattgttgaaagtaagtttctctacaaaaatttatttatttgaatttg 20133067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 20352344 - 20352402
Alignment:
Q  130 attatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttact 188  Q
    ||||||||||||||||| ||||| || |||||||||||||| || |||||| |||||||    
T  20352344 attatgttgaaagtttggtttcttatcgttgaaagtaagtttctctacaacaatttact 20352402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 660686 - 660601
Alignment:
Q  109 cttggtcgtccaatgttcaggattatgttgaaagtttgatttctaattgttgaaagtaagttcct-ttacaacgatttacttgttt 193  Q
    |||||| || |||||| ||||||||||||||||| ||| || |  ||||||||| |||||||| | |||||| | |||||||||||    
T  660686 cttggtggttcaatgtccaggattatgttgaaagcttggttacgtattgttgaatgtaagttcatattacaatggtttacttgttt 660601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 18982740 - 18982671
Alignment:
Q  130 attatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaattt 199  Q
    ||||||||||||| ||| |||| | | ||||||||||| || |||| |||| ||||||||| ||||||||    
T  18982740 attatgttgaaagcttggtttcgactagttgaaagtaaatttcttttcaactatttacttgattgaattt 18982671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 37426100 - 37426067
Alignment:
Q  158 ttgaaagtaagttcctttacaacgatttacttgt 191  Q
    |||||||||||||||||| |||||||||||||||    
T  37426100 ttgaaagtaagttcctttgcaacgatttacttgt 37426067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 20374324 - 20374260
Alignment:
Q  130 attatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttg 194  Q
    ||||||||||||||||| ||||  ||  |||| |||||||| || |||||| |||||||||||||    
T  20374324 attatgttgaaagtttggtttcgtatcattgatagtaagtttctctacaacaatttacttgtttg 20374260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 52 - 437
Target Start/End: Complemental strand, 4559 - 4174
Alignment:
Q  52 aaagacggcgaattctctataatttgcgagataagatagcaaaaaggatcaatatgccttggtcgtccaatgttcaggattatgttgaaagtttgatttc 151  Q
    ||||||| | |||||||||||||||| ||||||| | || | ||| ||||||||| ||||||| |||||||| |||| ||||||||||||| ||||||||    
T  4559 aaagacgaccaattctctataatttgagagataatagaggacaaatgatcaatataccttggtggtccaatggtcagaattatgttgaaagcttgatttc 4460  T
Q  152 taattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaatatatgtatgctatataataagctgtgtgatcattttcttatgat 251  Q
    | |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  4459 ttattgttgaaagtaagttcctttacaatgatttacttgtttgattttgtgctaatatatgtatgctatataataagttgtgtgatcattttcttatcat 4360  T
Q  252 gactttgattattttattgaatgat-tatgtatgggctattgttaagggtttagaaatttttgaaccaattatgtatttcatcatatagttttcaaaagt 350  Q
    ||||| |||||| ||||||||| || | |||||  ||||||||||| ||||| ||||  ||||||||||||||| |||||||  |||| || ||||||||    
T  4359 gacttcgattatattattgaataatgtttgtatcagctattgttaatggtttggaaa-ctttgaaccaattatgcatttcat-ttatatttatcaaaagt 4262  T
Q  351 taaaaagaggattttacgttacttgtatgatcatgttcacatggtggctttgatttgaatttgattata--cttgagtgattatgtatt 437  Q
    | | |||| |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||   |||||||||||||||||    
T  4261 t-agaagatgattttacattacttgtatgttcatgttcgcatggtggatttgatttgaatttgattatatttttgagtgattatgtatt 4174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 11970792 - 11970663
Alignment:
Q  132 tatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaatatatgtatgctatataataagctg 231  Q
    ||||||||||| ||| |||   ||||||||||||||||| || ||| || ||||||||||||||||||||| ||||| |||||||||||||||||   ||    
T  11970792 tatgttgaaagcttggttttgtattgttgaaagtaagtttctctacgacaatttacttgtttgaatttgtgataatacatgtatgctatataatatattg 11970693  T
Q  232 tgtgatcattttcttatgatgactttgatt 261  Q
    | |||||||||||||||||||  |||||||    
T  11970692 tatgatcattttcttatgatggttttgatt 11970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 135 - 261
Target Start/End: Complemental strand, 11981490 - 11981360
Alignment:
Q  135 gttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaatatatgtatgct-----atataataagc 229  Q
    |||||||| ||| ||||  ||||||||||||||||| || |||||| ||||||||||||||||||||| ||||  ||||||| |     |||||||| |     
T  11981490 gttgaaagcttggtttcgtattgttgaaagtaagtttctctacaacaatttacttgtttgaatttgtg-taattcatgtatgatatatcatataatatgt 11981392  T
Q  230 tgtgtgatcattttcttatgatgactttgatt 261  Q
    | ||||||||||||||||||||| ||||||||    
T  11981391 tctgtgatcattttcttatgatggctttgatt 11981360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 53775098 - 53775176
Alignment:
Q  129 gattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaat 207  Q
    |||||||||||||| ||| | || |  |||||||||||||||||| | | | |||||||||||||||||||||| ||||    
T  53775098 gattatgttgaaagcttggtatcaacgtgttgaaagtaagttcctcttccaagatttacttgtttgaatttgtgttaat 53775176  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 29642611 - 29642676
Alignment:
Q  127 aggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtt 192  Q
    ||||||||||||||||||||  ||  | |||||||||||||||| |||||||| ||||||||||||    
T  29642611 aggattatgttgaaagtttggcttggatttgttgaaagtaagtttctttacaatgatttacttgtt 29642676  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 29597376 - 29597305
Alignment:
Q  127 aggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaattt 199  Q
    ||||||||||||||||||||  ||| | |||||||||||||||| ||||| || |||||||||||| ||||||    
T  29597376 aggattatgttgaaagtttggcttcgatttgttgaaagtaagtt-ctttagaatgatttacttgttcgaattt 29597305  T

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Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 29821010 - 29820938
Alignment:
Q  127 aggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaattt 199  Q
    |||||||||||||||||||   ||  | |||||||||||||||| |||||||| |||||||||||| ||||||    
T  29821010 aggattatgttgaaagtttagcttggatttgttgaaagtaagtttctttacaatgatttacttgttcgaattt 29820938  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 18964622 - 18964581
Alignment:
Q  132 tatgttgaaagtttgatttctaattgttgaaagtaagttcct 173  Q
    ||||||||||| ||||| |||| |||||||||||||||||||    
T  18964622 tatgttgaaagcttgatatctacttgttgaaagtaagttcct 18964581  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 15961485 - 15961541
Alignment:
Q  135 gttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgt 191  Q
    |||||||| ||| ||||  ||||||||||||||||| || |||||||||||||||||    
T  15961485 gttgaaagcttggtttcatattgttgaaagtaagtttctctacaacgatttacttgt 15961541  T

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Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 20770933 - 20770984
Alignment:
Q  156 tgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtgctaat 207  Q
    |||||||||||||||||| | | | |||||||||||||||||||||| ||||    
T  20770933 tgttgaaagtaagttcctcttcgatgatttacttgtttgaatttgtgttaat 20770984  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 5436638 - 5436564
Alignment:
Q  128 ggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaatttgtg 202  Q
    ||||||||||||||| ||| |||   || ||| ||||||||||||| | |||| | |||||||||||||||||||    
T  5436638 ggattatgttgaaagcttggtttggtatcgttaaaagtaagttcctcttcaacaagttacttgtttgaatttgtg 5436564  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21021087 - 21021046
Alignment:
Q  130 attatgttgaaagtttgatttctaattgttgaaagtaagttc 171  Q
    ||||||||||||||||| |||| | |||||||||||||||||    
T  21021087 attatgttgaaagtttggtttcaacttgttgaaagtaagttc 21021046  T

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Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 27618722 - 27618791
Alignment:
Q  127 aggattatgttgaaagtttgatttctaattgttgaaagtaagttcctttacaacgatttacttgtttgaa 196  Q
    |||||||||||||||| ||| |||| | || |||||||||||||||| |   |||| |||||||||||||    
T  27618722 aggattatgttgaaagcttggtttcaatttcttgaaagtaagttcctatttgacgaattacttgtttgaa 27618791  T

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Target: scaffold0649 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 5690 - 5734
Alignment:
Q  127 aggattatgttgaaagtttgatttctaattgttgaaagtaagttc 171  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||    
T  5690 aggattatattgaaagtttggtttctgcttgttgaaagtaagttc 5734  T

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