View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2846_high_14 (Length: 341)
Name: NF2846_high_14
Description: NF2846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2846_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 20 - 331
Target Start/End: Original strand, 18603569 - 18603881
Alignment:
| Q |
20 |
ccctgttcataccatgcatcttttgatgaccatttatgcaaatcagagaataacatactaaagaagtcgatagcatatcgaccttgccggaacaatgaag |
119 |
Q |
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| T |
18603569 |
ccctgttcataccatgcatcttttgatgaccatttatgcaaataagagaataacatactaaagaagtcgatagcatatcgaccttgctggaacaatgaag |
18603668 |
T |
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| Q |
120 |
aaacattttatcaccaccaataggcgtaaccaccacattgtgaaa-cccgcatcgacaactctttgttgtacatctaacgaagaataccccgccaccact |
218 |
Q |
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| T |
18603669 |
aaacattttatcaccaccaataggcgtaaccaccacattgtgaaaacccgcatcgacaactctttgttgtacatctaacgaagaataccccgccaccatt |
18603768 |
T |
|
| Q |
219 |
gtcgctactaattctgcagatgcctgtgtctgatcctcagtgactgtttgatacaaaagtttttgatgtcggtccgggagaacagacttagtttgcgcta |
318 |
Q |
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|||||||||||| |||||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |
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| T |
18603769 |
gtcgctactaatcctgcagatgcctatgtcagatcctcagtaactgtttgatacaaaagtttttgatgccggtccgggtgaacagacttagtttgcgcca |
18603868 |
T |
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| Q |
319 |
ttgcctccttcat |
331 |
Q |
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||||||||||||| |
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| T |
18603869 |
ttgcctccttcat |
18603881 |
T |
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