View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2847_high_3 (Length: 430)
Name: NF2847_high_3
Description: NF2847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2847_high_3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 1 - 412
Target Start/End: Complemental strand, 46524819 - 46524408
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
46524819 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgtcttgttccttcatggcttcccagaa |
46524720 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46524719 |
ctctggtattcatggcgccaccagattgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
46524620 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46524619 |
cttcagttagtagctacacaggttttcacatagtaggtgatcttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
46524520 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttccactactccgtagaaaccccaaaatc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46524519 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttccactactccgtagaaaccccaaaatc |
46524420 |
T |
|
| Q |
401 |
aggaccgttgat |
412 |
Q |
| |
|
|||||||||||| |
|
|
| T |
46524419 |
aggaccgttgat |
46524408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 412
Target Start/End: Complemental strand, 46532372 - 46531961
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
46532372 |
aatagaacacagaacagtggaggtgaatggaatcaaaatgcatattgctgaaaaaggaaaagaaggacctgttgtcttgttccttcatggcttcccagaa |
46532273 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||| ||||| |||||||||||||||||||| ||||| | |
|
|
| T |
46532272 |
ctctggtattcatggcgccaccaaattgtagctcttggctccctcggttaccgcgccgttgctccagatctgcgtggctatggtgacaccgaggctccat |
46532173 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
||||| | || |||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||| |
|
|
| T |
46532172 |
cttcaataagcagctacactggttttcacattgtaggtgaccttgttgcacttatagatttgcttggtgttgaccaagtgtttcttgtggctcatgattg |
46532073 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttccactactccgtagaaaccccaaaatc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46532072 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttccactactccgtagaaaccccaaaatc |
46531973 |
T |
|
| Q |
401 |
aggaccgttgat |
412 |
Q |
| |
|
| |||||||||| |
|
|
| T |
46531972 |
aagaccgttgat |
46531961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 412
Target Start/End: Original strand, 46322740 - 46323151
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| || ||| |
|
|
| T |
46322740 |
aatagagcacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgttttgttccttcacggctttcctgaa |
46322839 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
|||||||| || ||||||||||||| || |||||| |||| ||||||||||| || || ||||| ||||| ||||||||||||||||| || ||||| | |
|
|
| T |
46322840 |
ctctggtactcttggcgccaccagattgcggctctcggctctctcggctaccgcgccgtagctccggatctacgtggctatggtgacactgaggctccat |
46322939 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
||||| | || |||||||||||||||||||| |||||||| || ||||||||||||||||| || || |||||||||||||||||||| ||||||||||| |
|
|
| T |
46322940 |
cttcaataagcagctacacaggttttcacattgtaggtgatctggttgcacttatagatttgcttggcgttgatcaagtgtttcttgtagctcatgattg |
46323039 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttccactactccgtagaaaccccaaaatc |
400 |
Q |
| |
|
|||||| |||||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||| |||||| |
|
|
| T |
46323040 |
gggtgccatcattggttggtacctttgcatgtttcgccctgaaagaatcaaagcctatgtttgtctcagtgttccatttacgcgtagaaaccctaaaatc |
46323139 |
T |
|
| Q |
401 |
aggaccgttgat |
412 |
Q |
| |
|
|| || |||||| |
|
|
| T |
46323140 |
agaactgttgat |
46323151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 412
Target Start/End: Original strand, 46326445 - 46326856
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| || ||| |
|
|
| T |
46326445 |
aatagaacatagaacagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgttttgttccttcacggctttcctgaa |
46326544 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
|||||||| || ||||||||||||| || |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
46326545 |
ctctggtactcttggcgccaccagattgcggctctcggatccctcggttaccgtgctgttgctcccgatctccgtggctatggtgacacagatgttccgt |
46326644 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
|||| |||| ||||||||| |||||||| |||| |||||| ||||| | || || || || || ||||| || ||||| || ||||||| ||||||| |
|
|
| T |
46326645 |
cttccattagcagctacacatgttttcacgtagttggtgacattgtttctctcatcgacttgcttggtgtggaacaagttttccttgttggtcatgatat |
46326744 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttccactactccgtagaaaccccaaaatc |
400 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| | |||| | ||||||| |||||| |
|
|
| T |
46326745 |
gggtgccatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcctatgtgtgcctcagtgttccatttctccatcgaaaccctaaaatc |
46326844 |
T |
|
| Q |
401 |
aggaccgttgat |
412 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
46326845 |
agaaccgttgat |
46326856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 46490525 - 46490151
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |
|
|
| T |
46490525 |
aatagaacacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaa |
46490426 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| |||||||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
46490425 |
ctctggtattcatggcgccaccagatttctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccgg |
46490326 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
| || |||||||||||||| || || | || |||||| | ||||| || || || | || || ||||| | |||||||||||| ||||||||||| |
|
|
| T |
46490325 |
cctccattagtagctacacaatcttccatttggttggtgacatcgttgctctcatcgactcacttggcgttgaccgagtgtttcttgtagctcatgattg |
46490226 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcc |
375 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||| |||||||| |
|
|
| T |
46490225 |
gggtgccatcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttcc |
46490151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 46520753 - 46520378
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||| |
|
|
| T |
46520753 |
aatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggcttccctgaa |
46520654 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||| ||||| |||||||| || |||||||||||||| |
|
|
| T |
46520653 |
ctctggtattcatggcgccaccagattgctgctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccg |
46520554 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
||||| | || ||||||||| || ||| | || ||||| | ||||| || || || | || || ||||| |||||||| ||||| ||||||||||| |
|
|
| T |
46520553 |
cttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattg |
46520454 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcca |
376 |
Q |
| |
|
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
46520453 |
gggtgccatgattggttggtatctttgcatgtttcgccctgaaagaatcaaagcctatgtttgtcttagtgttcca |
46520378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 46479323 - 46478964
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||| |
|
|
| T |
46479323 |
aatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggcttccctgaa |
46479224 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||| ||||| |||||||| || |||||||||||||| |
|
|
| T |
46479223 |
ctctggtattcatggcgccaccagattgctgctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccg |
46479124 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
||||| | || ||||||||| || ||| | || ||||| | ||||| || || || | || || ||||| |||||||| ||||| ||||||||||| |
|
|
| T |
46479123 |
cttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattg |
46479024 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgt |
360 |
Q |
| |
|
|||||| || |||||||||||||||||| | ||||||||||||| ||||||||||||||| |
|
|
| T |
46479023 |
gggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
46478964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 3 - 376
Target Start/End: Complemental strand, 46517110 - 46516737
Alignment:
| Q |
3 |
tagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaact |
102 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||||| | || |||||||||||||| || || ||| | |
|
|
| T |
46517110 |
tagagcacagaacagtggaagtgaatggaatcaaaatgcatgtcgcagagaaaggaaaagaaggaccaatagtattgttccttcatggttttcctgaaat |
46517011 |
T |
|
| Q |
103 |
ctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgtct |
202 |
Q |
| |
|
|||||| |||||||||||||||| ||| |||||||||||||| |||||||| | || ||||| |||||| ||||||| |||||||| |||||||| || |
|
|
| T |
46517010 |
ctggtactcatggcgccaccagattgttgctctcagctcccttggctaccgcaccgtggctccagatctctgtggctacggtgacactgatgctcccact |
46516911 |
T |
|
| Q |
203 |
tcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattggg |
302 |
Q |
| |
|
|||||||||||||||||| ||| || | || ||||| | ||||| || || || | |||||||| || ||||| || ||||| ||||||||||||| |
|
|
| T |
46516910 |
tcagttagtagctacacaattttacatttggttggtgatatcgttgctctaattgactcactgggtgtggaccaagttttccttgtggctcatgattggg |
46516811 |
T |
|
| Q |
303 |
gtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcca |
376 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||| | | |||| |||||||| || |||||||||||| |
|
|
| T |
46516810 |
gtgctatcattggttggtatctttgtttgtttcgtcctgagaaagtcaaggcttatgtttgcctcagtgttcca |
46516737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 372
Target Start/End: Complemental strand, 46494823 - 46494452
Alignment:
| Q |
1 |
aatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggaaaagaaggaccagttgtcttgttccttcatggcttcccagaa |
100 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| || ||||| ||| |
|
|
| T |
46494823 |
aatagagcacagaacagtggaagtgaatggaatcaaaatgcatattgctgaaaaaggaaaagaaggacctgttgtcctgttccttcacggattccctgaa |
46494724 |
T |
|
| Q |
101 |
ctctggtattcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgt |
200 |
Q |
| |
|
|||||||| || ||||||||||||| || |||||| |||| ||||| ||||| ||||| ||||||||||| ||||| ||||| || || |||| || |
|
|
| T |
46494723 |
ctctggtactcttggcgccaccagattgcggctctcggctctctcggttaccgggctgtggctcccgatcttcgtggttatggcgatactgatgtcccca |
46494624 |
T |
|
| Q |
201 |
cttcagttagtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattg |
300 |
Q |
| |
|
||| || | || || ||| || ||| | || |||||| ||||||| || || || | || || ||||||||||| || ||||| ||||||||||| |
|
|
| T |
46494623 |
gttcggtaaacagttatacaatcttccacttggttggtgacattgttgcgctcatcgactcgcttggggttgatcaagtcttccttgtggctcatgattg |
46494524 |
T |
|
| Q |
301 |
gggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgt |
372 |
Q |
| |
|
|||||| ||| |||||||||||||||| ||||||||||||| ||| | ||||| ||||| ||||||||||| |
|
|
| T |
46494523 |
gggtgccatcgttggttggtatctttgcttgtttcgccctgagagagttaaagcctatgtgtgtctcagtgt |
46494452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 366
Target Start/End: Complemental strand, 46464928 - 46464833
Alignment:
| Q |
269 |
gttgatcaagtgtttcttgttgctcatgattggggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtct |
366 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||| | | ||||||||||| ||| ||||||| ||||||||| ||||||| ||||| ||||| |
|
|
| T |
46464928 |
gttgatcaagtcttttttgttgctcatgattggggtgccttaactggttggtatc--tgtttgtttcgtcctgaaagagtcaaagcctatgtttgtct |
46464833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 110 - 375
Target Start/End: Original strand, 7475308 - 7475573
Alignment:
| Q |
110 |
tcatggcgccaccagaatgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgtcttcagtta |
209 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||| || || ||| | ||||||||||||||||||||||||||| |||| |||||| | | |
|
|
| T |
7475308 |
tcatggcgccaccagattatagctctcagctccctcggctaccatgtcgtggctactgatctccgtggctatggtgacaccgattctccatcttcaataa |
7475407 |
T |
|
| Q |
210 |
gtagctacacaggttttcacatagtaggtgaccttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattggggtgctat |
309 |
Q |
| |
|
| ||||||||||| ||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
7475408 |
gcagctacacagggtttcatatggttggtgaccttgttgcacttatagattttcttggtgttgatcaagtgtttcttgtggctcatgattggggtgccat |
7475507 |
T |
|
| Q |
310 |
cattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcc |
375 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
7475508 |
cattggttggtacctttgcacgtttcgccctgaaagaatcaaagcctatgtttgtctcagtgttcc |
7475573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 376
Target Start/End: Original strand, 88323 - 88406
Alignment:
| Q |
293 |
catgattggggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcca |
376 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| |||| ||||| || || |||||| |||| || ||||| ||||| ||||||||| |
|
|
| T |
88323 |
catgattggggtgcaatcatcggttggtatgtttgcatgttccgaccagaaagagtcaaggcctatgtttgtcttagtgttcca |
88406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 37151907 - 37151824
Alignment:
| Q |
293 |
catgattggggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcca |
376 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| |||| ||||| || || |||||| |||| || ||||| ||||| ||||||||| |
|
|
| T |
37151907 |
catgattggggtgcaatcatcggttggtatgtttgcatgttccgaccagaaagagtcaaggcctatgtttgtcttagtgttcca |
37151824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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