View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2847_high_5 (Length: 262)
Name: NF2847_high_5
Description: NF2847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2847_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 3951925 - 3951696
Alignment:
| Q |
18 |
aatagaatagtacctacccaacattctctcagacaccttaggattgtggatagttaaaacttccttgagcaacagtccaatccataacgtgattttattc |
117 |
Q |
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| T |
3951925 |
aatagaatagtacctacccaacattctctcagacaccttaggattgtggatagttaaaactttcttgagcaacagtccaatccataacgtgattttattc |
3951826 |
T |
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| Q |
118 |
tactgatagattctgtatcaaaagaccatgtaggtatagtggaatttcctatgctaaataatgcttccttgtgttgtgtggtccaattcccaggtgtgac |
217 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3951825 |
tactgatagattctgtatcaaaagaccatgtaggtgtagtggaatttcctatgctaaataatgcttccttgtgttgtgtggtccaattcccaggtgt--- |
3951729 |
T |
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| Q |
218 |
tgactattccctattgcctgctatttactgttca |
251 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
3951728 |
-gactattccctattgcctgctatttactgttca |
3951696 |
T |
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