View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2848_high_12 (Length: 475)

Name: NF2848_high_12
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2848_high_12
NF2848_high_12
[»] chr1 (42 HSPs)
chr1 (9-186)||(50970647-50970824)
chr1 (9-187)||(18984117-18984295)
chr1 (16-186)||(5540194-5540364)
chr1 (9-186)||(29869619-29869796)
chr1 (16-186)||(15646571-15646741)
chr1 (9-183)||(33144288-33144462)
chr1 (9-182)||(5962947-5963120)
chr1 (9-182)||(15173099-15173272)
chr1 (16-185)||(29306953-29307122)
chr1 (9-185)||(8678911-8679086)
chr1 (9-188)||(9018970-9019149)
chr1 (9-185)||(21856412-21856588)
chr1 (9-185)||(17433216-17433392)
chr1 (9-183)||(39154021-39154195)
chr1 (11-187)||(26859431-26859606)
chr1 (16-185)||(29307317-29307487)
chr1 (25-184)||(5539817-5539977)
chr1 (16-188)||(9019338-9019511)
chr1 (23-183)||(17433597-17433758)
chr1 (27-187)||(50970276-50970437)
chr1 (25-185)||(29870003-29870164)
chr1 (25-184)||(8678542-8678702)
chr1 (25-188)||(21856039-21856203)
chr1 (26-184)||(4636356-4636515)
chr1 (25-187)||(15173478-15173640)
chr1 (25-186)||(18984503-18984665)
chr1 (25-186)||(39154404-39154566)
chr1 (25-177)||(33143925-33144078)
chr1 (45-186)||(52268289-52268430)
chr1 (25-187)||(15646190-15646353)
chr1 (68-185)||(26859059-26859176)
chr1 (25-184)||(5962579-5962739)
chr1 (11-125)||(4636033-4636146)
chr1 (99-188)||(2733416-2733505)
chr1 (69-183)||(52269177-52269291)
chr1 (78-194)||(47827026-47827141)
chr1 (25-185)||(17112282-17112442)
chr1 (110-183)||(47826966-47827039)
chr1 (15-49)||(17088516-17088550)
chr1 (105-185)||(50419726-50419806)
chr1 (9-45)||(17088290-17088326)
chr1 (9-49)||(39485200-39485240)
[»] chr5 (46 HSPs)
chr5 (9-185)||(5819298-5819474)
chr5 (9-188)||(18183338-18183517)
chr5 (9-187)||(2865124-2865302)
chr5 (9-187)||(8460928-8461106)
chr5 (9-185)||(8647438-8647614)
chr5 (9-185)||(19359136-19359312)
chr5 (9-187)||(24362205-24362383)
chr5 (9-188)||(15708968-15709146)
chr5 (9-186)||(29455111-29455288)
chr5 (13-189)||(14215616-14215792)
chr5 (9-188)||(15372242-15372421)
chr5 (9-188)||(164560-164739)
chr5 (9-186)||(16018588-16018763)
chr5 (25-187)||(5818927-5819090)
chr5 (25-187)||(18182968-18183131)
chr5 (25-187)||(19359520-19359683)
chr5 (25-188)||(8647822-8647986)
chr5 (23-186)||(25000471-25000635)
chr5 (20-187)||(14463901-14464067)
chr5 (9-183)||(24331929-24332107)
chr5 (25-186)||(8461315-8461477)
chr5 (25-179)||(24361843-24361997)
chr5 (26-185)||(164191-164350)
chr5 (25-183)||(2864756-2864915)
chr5 (25-179)||(24325218-24325372)
chr5 (25-183)||(14215243-14215402)
chr5 (25-188)||(24331556-24331722)
chr5 (9-163)||(25000112-25000266)
chr5 (25-186)||(29454739-29454901)
chr5 (23-187)||(16018969-16019134)
chr5 (43-185)||(7349420-7349562)
chr5 (25-185)||(15709353-15709513)
chr5 (65-184)||(4222147-4222266)
chr5 (26-183)||(15371873-15372030)
chr5 (45-185)||(4623148-4623286)
chr5 (47-185)||(4219663-4219800)
chr5 (59-185)||(7348559-7348685)
chr5 (47-179)||(6019177-6019309)
chr5 (46-172)||(4624631-4624757)
chr5 (46-184)||(6018315-6018452)
chr5 (43-134)||(13814131-13814226)
chr5 (59-106)||(14462683-14462730)
chr5 (9-68)||(24325580-24325639)
chr5 (9-55)||(16752711-16752757)
chr5 (9-92)||(27307428-27307511)
chr5 (11-55)||(32305947-32305991)
[»] scaffold0295 (2 HSPs)
scaffold0295 (9-188)||(4790-4969)
scaffold0295 (25-183)||(5179-5334)
[»] chr4 (60 HSPs)
chr4 (9-188)||(12234326-12234505)
chr4 (15-187)||(25447611-25447783)
chr4 (9-183)||(33109686-33109860)
chr4 (9-183)||(46193774-46193948)
chr4 (9-186)||(15523603-15523780)
chr4 (9-185)||(11153516-11153692)
chr4 (9-188)||(22434547-22434724)
chr4 (9-188)||(25937667-25937846)
chr4 (16-183)||(38962195-38962362)
chr4 (9-188)||(51020794-51020973)
chr4 (9-186)||(22170306-22170482)
chr4 (9-183)||(4219559-4219733)
chr4 (9-183)||(23494445-23494619)
chr4 (9-182)||(2118665-2118837)
chr4 (9-186)||(48526195-48526371)
chr4 (25-185)||(22434179-22434340)
chr4 (9-188)||(45082429-45082606)
chr4 (9-187)||(54995437-54995614)
chr4 (25-191)||(20470895-20471062)
chr4 (23-185)||(46193405-46193568)
chr4 (25-185)||(25447247-25447408)
chr4 (26-187)||(15523233-15523395)
chr4 (25-185)||(45082808-45082969)
chr4 (25-188)||(4219943-4220107)
chr4 (69-188)||(23494872-23494991)
chr4 (25-185)||(12234713-12234874)
chr4 (25-187)||(54995067-54995230)
chr4 (25-182)||(48526565-48526723)
chr4 (9-117)||(12503805-12503913)
chr4 (25-186)||(11153145-11153307)
chr4 (26-186)||(25938056-25938217)
chr4 (59-187)||(33109883-33110011)
chr4 (25-187)||(51021180-51021342)
chr4 (25-182)||(18751602-18751760)
chr4 (71-188)||(18763951-18764068)
chr4 (25-183)||(2118295-2118454)
chr4 (43-184)||(20958264-20958403)
chr4 (44-184)||(44892552-44892692)
chr4 (44-187)||(48293592-48293735)
chr4 (68-185)||(35363028-35363146)
chr4 (44-185)||(48294946-48295088)
chr4 (43-187)||(48713749-48713893)
chr4 (44-163)||(43243685-43243803)
chr4 (49-187)||(48708293-48708431)
chr4 (25-168)||(12503453-12503597)
chr4 (44-184)||(44890518-44890658)
chr4 (49-182)||(16690939-16691072)
chr4 (47-163)||(43281198-43281313)
chr4 (59-186)||(10258306-10258433)
chr4 (47-178)||(20957196-20957327)
chr4 (44-127)||(43242328-43242411)
chr4 (115-186)||(16318251-16318322)
chr4 (9-76)||(18751971-18752038)
chr4 (49-185)||(16691481-16691616)
chr4 (9-195)||(17503964-17504149)
chr4 (87-185)||(55189528-55189626)
chr4 (9-49)||(17504329-17504369)
chr4 (9-49)||(35193443-35193483)
chr4 (44-124)||(44220781-44220861)
chr4 (9-42)||(40160236-40160269)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-187)||(4576-4754)
scaffold0273 (25-146)||(4242-4364)
[»] chr7 (36 HSPs)
chr7 (9-187)||(19830418-19830596)
chr7 (9-186)||(37786766-37786943)
chr7 (9-185)||(19590525-19590701)
chr7 (11-188)||(2659211-2659388)
chr7 (9-186)||(38858642-38858819)
chr7 (305-457)||(4903050-4903203)
chr7 (9-182)||(29100220-29100393)
chr7 (11-187)||(35289272-35289448)
chr7 (11-185)||(32004985-32005159)
chr7 (9-182)||(4641443-4641616)
chr7 (11-187)||(34534162-34534338)
chr7 (25-188)||(19590909-19591073)
chr7 (16-179)||(23953105-23953268)
chr7 (16-187)||(4478076-4478247)
chr7 (25-188)||(38859025-38859189)
chr7 (25-187)||(2658837-2659000)
chr7 (25-187)||(34533789-34533952)
chr7 (26-187)||(32004612-32004774)
chr7 (27-188)||(37787153-37787315)
chr7 (44-184)||(28584326-28584466)
chr7 (26-185)||(35288903-35289063)
chr7 (312-457)||(4906435-4906580)
chr7 (43-188)||(38160948-38161093)
chr7 (25-186)||(19830804-19830965)
chr7 (47-187)||(28583437-28583577)
chr7 (25-172)||(29099863-29100011)
chr7 (25-188)||(23952727-23952892)
chr7 (25-182)||(4641828-4641983)
chr7 (414-457)||(4929376-4929419)
chr7 (16-51)||(32427397-32427432)
chr7 (399-457)||(4924041-4924099)
chr7 (9-55)||(35579028-35579074)
chr7 (9-51)||(35579256-35579298)
chr7 (403-457)||(5823060-5823114)
chr7 (9-55)||(26026688-26026734)
chr7 (9-55)||(48247721-48247767)
[»] chr6 (36 HSPs)
chr6 (9-187)||(20741098-20741276)
chr6 (9-185)||(10900299-10900475)
chr6 (9-187)||(18257135-18257313)
chr6 (9-185)||(11276951-11277127)
chr6 (9-186)||(15828010-15828187)
chr6 (9-188)||(28472634-28472812)
chr6 (9-188)||(29859823-29860001)
chr6 (11-187)||(12935528-12935704)
chr6 (9-188)||(11444984-11445163)
chr6 (9-184)||(31470685-31470860)
chr6 (11-185)||(1149802-1149977)
chr6 (25-188)||(2319669-2319832)
chr6 (9-182)||(2322588-2322760)
chr6 (16-182)||(10899942-10900109)
chr6 (25-188)||(12935154-12935318)
chr6 (9-184)||(18505288-18505463)
chr6 (25-188)||(11445371-11445535)
chr6 (25-188)||(22219737-22219901)
chr6 (9-186)||(23073998-23074164)
chr6 (25-187)||(23075512-23075675)
chr6 (22-185)||(4811372-4811535)
chr6 (25-186)||(31470314-31470476)
chr6 (25-186)||(20741485-20741650)
chr6 (25-182)||(18504922-18505080)
chr6 (16-186)||(11276589-11276760)
chr6 (68-185)||(18257565-18257682)
chr6 (43-183)||(29033436-29033577)
chr6 (32-184)||(15827639-15827794)
chr6 (49-182)||(3835135-3835268)
chr6 (43-183)||(29035040-29035180)
chr6 (97-187)||(1149463-1149553)
chr6 (44-188)||(18296142-18296285)
chr6 (59-185)||(4811675-4811801)
chr6 (10-80)||(35163557-35163627)
chr6 (129-185)||(22534214-22534270)
chr6 (9-49)||(32836367-32836407)
[»] chr8 (32 HSPs)
chr8 (9-193)||(12571855-12572040)
chr8 (9-188)||(19176659-19176838)
chr8 (9-194)||(44831614-44831799)
chr8 (9-181)||(13224645-13224816)
chr8 (12-187)||(41681132-41681306)
chr8 (9-186)||(9930026-9930203)
chr8 (11-188)||(11656452-11656630)
chr8 (9-182)||(33328161-33328334)
chr8 (9-192)||(31133213-31133396)
chr8 (9-185)||(9178005-9178180)
chr8 (25-186)||(13225023-13225185)
chr8 (25-188)||(19176287-19176451)
chr8 (25-186)||(44831246-44831408)
chr8 (25-185)||(41681518-41681679)
chr8 (25-188)||(33742919-33743082)
chr8 (11-138)||(33743290-33743417)
chr8 (9-182)||(4630161-4630328)
chr8 (25-182)||(9928912-9929070)
chr8 (25-186)||(11656841-11657003)
chr8 (26-184)||(31133605-31133764)
chr8 (27-188)||(34540934-34541096)
chr8 (25-182)||(12572235-12572393)
chr8 (25-183)||(33328524-33328683)
chr8 (31-187)||(4629795-4629952)
chr8 (77-187)||(11336959-11337069)
chr8 (44-186)||(8073956-8074097)
chr8 (47-188)||(10918123-10918264)
chr8 (44-103)||(43958267-43958326)
chr8 (10-55)||(18805292-18805337)
chr8 (152-187)||(9177665-9177700)
chr8 (25-93)||(9177724-9177793)
chr8 (140-188)||(43958206-43958254)
[»] chr3 (61 HSPs)
chr3 (9-185)||(39555946-39556122)
chr3 (9-187)||(31779021-31779199)
chr3 (9-182)||(41046703-41046876)
chr3 (9-187)||(5136978-5137156)
chr3 (11-189)||(20840556-20840734)
chr3 (9-188)||(24300925-24301104)
chr3 (9-186)||(37726928-37727105)
chr3 (9-186)||(23644461-23644638)
chr3 (30-188)||(48452986-48453144)
chr3 (9-188)||(26837725-26837903)
chr3 (9-188)||(30104479-30104657)
chr3 (11-185)||(32535330-32535508)
chr3 (9-183)||(25853596-25853770)
chr3 (9-186)||(27393946-27394123)
chr3 (16-185)||(43973441-43973610)
chr3 (9-181)||(22425182-22425354)
chr3 (25-188)||(43973824-43973988)
chr3 (9-188)||(26274936-26275114)
chr3 (9-186)||(17464860-17465038)
chr3 (25-185)||(37727314-37727475)
chr3 (25-188)||(17464488-17464652)
chr3 (25-186)||(20840945-20841107)
chr3 (25-186)||(27393660-27393822)
chr3 (23-188)||(29801798-29801964)
chr3 (25-186)||(39555577-39555739)
chr3 (25-187)||(4275748-4275911)
chr3 (25-186)||(31778652-31778814)
chr3 (44-182)||(25612381-25612519)
chr3 (25-185)||(23644849-23645010)
chr3 (25-185)||(25853234-25853395)
chr3 (25-188)||(5137365-5137529)
chr3 (25-186)||(30098147-30098309)
chr3 (25-188)||(22424811-22424975)
chr3 (25-182)||(32534962-32535120)
chr3 (64-185)||(29801356-29801477)
chr3 (25-187)||(26837358-26837521)
chr3 (25-182)||(24300560-24300717)
chr3 (43-185)||(50116812-50116954)
chr3 (25-182)||(26274570-26274728)
chr3 (46-185)||(23228414-23228552)
chr3 (25-182)||(41047083-41047239)
chr3 (44-188)||(51474737-51474882)
chr3 (45-184)||(32697106-32697244)
chr3 (71-184)||(51473429-51473542)
chr3 (44-187)||(37220555-37220698)
chr3 (47-187)||(45965936-45966076)
chr3 (41-183)||(25420542-25420684)
chr3 (57-160)||(18010162-18010265)
chr3 (109-187)||(37222040-37222118)
chr3 (44-184)||(25419145-25419285)
chr3 (9-86)||(55192216-55192293)
chr3 (43-186)||(23227261-23227398)
chr3 (8-55)||(49407925-49407972)
chr3 (9-69)||(29801532-29801592)
chr3 (9-55)||(37075818-37075864)
chr3 (9-188)||(55389967-55390146)
chr3 (9-188)||(27200062-27200240)
chr3 (15-49)||(33412383-33412417)
chr3 (9-49)||(27199838-27199878)
chr3 (58-182)||(32695706-32695830)
chr3 (132-188)||(52375824-52375880)
[»] chr2 (38 HSPs)
chr2 (11-187)||(11090519-11090695)
chr2 (9-188)||(239350-239528)
chr2 (9-186)||(40027139-40027316)
chr2 (9-188)||(18451200-18451379)
chr2 (9-188)||(40815714-40815893)
chr2 (9-187)||(22374318-22374496)
chr2 (9-187)||(1978106-1978284)
chr2 (9-185)||(43058333-43058509)
chr2 (9-186)||(26538096-26538273)
chr2 (11-185)||(28616613-28616788)
chr2 (12-182)||(14432145-14432315)
chr2 (16-188)||(26538454-26538627)
chr2 (9-188)||(3025463-3025641)
chr2 (16-182)||(8425736-8425902)
chr2 (186-307)||(16194936-16195057)
chr2 (11-186)||(7446341-7446519)
chr2 (44-186)||(20444748-20444890)
chr2 (25-188)||(7446730-7446894)
chr2 (25-186)||(18450829-18450991)
chr2 (44-188)||(20440436-20440579)
chr2 (25-192)||(40815338-40815506)
chr2 (25-187)||(11090904-11091067)
chr2 (25-187)||(22374709-22374872)
chr2 (25-182)||(40027524-40027682)
chr2 (44-184)||(35781067-35781207)
chr2 (25-188)||(43058717-43058880)
chr2 (25-186)||(28616998-28617160)
chr2 (44-185)||(35779708-35779849)
chr2 (25-184)||(239736-239896)
chr2 (59-187)||(1978528-1978656)
chr2 (44-183)||(8972239-8972378)
chr2 (68-187)||(28847123-28847242)
chr2 (45-183)||(15552459-15552596)
chr2 (26-182)||(8425358-8425514)
chr2 (26-185)||(3025848-3026006)
chr2 (25-188)||(14432525-14432689)
chr2 (43-183)||(15551501-15551641)
chr2 (9-188)||(28143400-28143578)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-187)||(1665-1841)
scaffold0951 (25-191)||(2051-2218)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-188)||(134042-134221)
[»] scaffold0007 (3 HSPs)
scaffold0007 (9-186)||(64301-64478)
scaffold0007 (70-182)||(64735-64847)
scaffold0007 (9-183)||(205738-205911)
[»] scaffold1223 (2 HSPs)
scaffold1223 (9-183)||(755-928)
scaffold1223 (16-185)||(1116-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (9-188)||(42528-42706)
scaffold0027 (16-182)||(42172-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (9-182)||(10242-10414)
scaffold0432 (85-182)||(9935-10032)
[»] scaffold0417 (2 HSPs)
scaffold0417 (9-163)||(10643-10797)
scaffold0417 (25-185)||(11007-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (18-186)||(18834-19001)
scaffold0176 (88-185)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (59-186)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-117)||(16564-16672)
scaffold0157 (25-168)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (43-184)||(568-709)
[»] scaffold0057 (2 HSPs)
scaffold0057 (44-182)||(61862-62000)
scaffold0057 (111-187)||(61026-61102)
[»] scaffold0076 (1 HSPs)
scaffold0076 (84-182)||(8453-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (44-181)||(454-589)
[»] scaffold0168 (1 HSPs)
scaffold0168 (43-136)||(7691-7784)


Alignment Details
Target: chr1 (Bit Score: 158; Significance: 7e-84; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 50970647 - 50970824
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 18984295 - 18984117
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 5540194 - 5540364
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 29869796 - 29869619
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 15646571 - 15646741
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||| ||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||  ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 29307122 - 29306953
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 8678911 - 8679086
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
     |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 9019149 - 9018970
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 9018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 21856412 - 21856588
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| ||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 17433392 - 17433216
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| |  ||||||| ||| |||||||||||| || |||||||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 39154195 - 39154021
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | ||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||| || ||||||||||| || ||||||||| || |||||||||||||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 26859431 - 26859606
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
     ||||||||||||||||||||||||  |||||||||| ||| ||||||||||| || ||||||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 29307317 - 29307487
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 5539977 - 5539817
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 5539878  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  5539877 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 9019338 - 9019511
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||| |||||||||||||| |||||||||||||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||||||||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||| ||||| |||||||| |||| |||| |||||||||| ||||||||||||||||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 9019511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  122 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 27 - 187
Target Start/End: Complemental strand, 50970437 - 50970276
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| |  ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  126 aagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 29870003 - 29870164
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |  ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 8678702 - 8678542
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||| ||||||| || ||  | ||||| |  ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 8678603  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  8678602 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 21856203 - 21856039
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||| ||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagtctaa 21856039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 4636356 - 4636515
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 15173478 - 15173640
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 18984503 - 18984665
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| |||||||||| |||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984602  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||    
T  18984603 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 39154404 - 39154566
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgtttt 39154503  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  39154504 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 33144078 - 33143925
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || |||||||||||| || ||| |||||||||||||||| |||||||||||||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgta 177  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 52268430 - 52268289
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| | |||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  145 tgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||  ||||||||| |||| ||||||||||||||||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 15646353 - 15646190
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| |||||  | |||||  | ||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgtttt 15646254  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  15646253 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 26859176 - 26859059
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagac 167  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| | |||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  168 caaaagtgtaattaagcc 185  Q
    ||||||||||||||||||    
T  26859076 caaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 5962739 - 5962579
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||| ||||| |||| |||||  | ||||| || ||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgtttt 5962640  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    |||||||| ||||||||||||||||||| ||| ||||||| |||||||| |||||||||||    
T  5962639 aaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||||||||||||| ||||| |||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  111 tttgttctgttttaa 125  Q
    |||||||||||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 2733416 - 2733505
Alignment:
Q  99 ttgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| |||||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcctaa 2733505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  69 gtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 168  Q
    |||||||||||| | ||||||||||||||| ||||||||  |||||||||||||||||||||||| |||  |||| ||| || | |||||||||| ||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  169 aaaagtgtaattaag 183  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 47827026 - 47827141
Alignment:
Q  78 aaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgta 177  Q
    |||||| |||||||||||||||| || |||  ||||||||||||||||||||||| ||||| |||||||| |||||||||||| | ||| |||||||||     
T  47827026 aaaatataacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgt- 47827124  T
Q  178 attaagcctaagtttaa 194  Q
    |||||||| || |||||    
T  47827125 attaagccaaaatttaa 47827141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 17112442 - 17112282
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||| ||||||||| |||||  | ||||| || ||||||||||||||| ||| |||||||||||||||| |||  |||| |||| ||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||   |||| |||| ||| |||  ||||||| ||  ||||||||||||||||||||    
T  17112342 aaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||| | ||||||||||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 50419726 - 50419806
Alignment:
Q  105 gaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||  |||||||| |||||||||| |||||||| | || | |||  ||| ||||||||||| |||||||||    
T  50419726 gaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagcc 50419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 17088326 - 17088290
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgc 45  Q
    |||||||| |||||||||||||||| |||||||||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgc 17088290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 39485240 - 39485200
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||| |||||||||||||||||||||| |||||| ||||    
T  39485240 agcatatggggtaggtctaaaactgtcatctctctgtgttt 39485200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 3e-83; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 5819298 - 5819474
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 18183338 - 18183517
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18183517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 2865124 - 2865302
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 8461106 - 8460928
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 8647614 - 8647438
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
     |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 19359312 - 19359136
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 24362205 - 24362383
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 15709146 - 15708968
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcctaa 15708968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 29455111 - 29455288
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
     |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 14215616 - 14215792
Alignment:
Q  13 tagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttt 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||| ||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  113 tgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaag 189  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||| ||||||||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcctaag 14215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 15372242 - 15372421
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||  |||| || |||||| |||||||||||||| ||||| ||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 15372421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 164560 - 164739
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||| ||||||||| |||| | |||||||||| || || ||||| | |||||||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcctaa 164739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 16018763 - 16018588
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||| ||||| ||| |||||| ||||||||| ||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 5819090 - 5818927
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 18183131 - 18182968
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| | |||||| | || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 19359520 - 19359683
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgtttt 19359619  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19359620 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 8647822 - 8647986
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| |  |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 8647986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 25000471 - 25000635
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    |||||||||||||||||||||||||||||||||  | ||||| || ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  122 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||  || ||||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 14463901 - 14464067
Alignment:
Q  20 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||| || |||||||||||     
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaat-tggggtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  120 ttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||| ||  |  |||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 24331929 - 24332107
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg-aaaaatacaac-aaaaatgataattgaatga 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||| | ||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  107 ccgttttgttctgtttt-aaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc-aaaagtgtaattaag 183  Q
    ||||||||||||||||| |||| ||||||| ||||||||||| || ||||||||| || |||| |||||||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 8461315 - 8461477
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || |||| |||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||||||||||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 179  Q
     ||||||| || ||||||||||  |||||||||||| |  |||||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 164350 - 164191
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||| |||| ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||||| || || |||||||| ||||||||||||| | |||||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||| |||||||||||||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 179  Q
     ||||||| || ||||||||||  |||||||||||| |  |||||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||| |  ||||||||||||| || |||||||||||| |||||||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 24331722 - 24331556
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaat--gataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| ||||||| |||||||||   |||||||||| |||||||||||||||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  122 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcctaa 24331556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| || ||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 163  Q
     |||| ||||||||||| |||||| |||||  ||||||| |||||||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 29454901 - 29454739
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| || |||||||||||||| || |||||||||||||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||| ||||| |||||||| ||||||||||||| | ||||||||||| ||||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 187
Target Start/End: Original strand, 16018969 - 16019134
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||||||||||||||||||||||||  ||| |||| |||| ||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  122 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||| ||||||||| |||||||| || ||||||||| || |||||||||||||||||| ||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 7349420 - 7349562
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||| ||||| | ||||||||||||||| |||| ||  |||||||| ||||||||||| ||||||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 15709353 - 15709513
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||||| || |||||  | ||||| || ||||||||||||||| ||||| ||||||||| | || |||||||||||||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
     |||||||| ||| |||||| ||| ||||||||||||| | |||||||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  65 gggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaa 164  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||||||||||| ||||| ||||||||  || |||||||||||     
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  165 gaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 15372030 - 15371873
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaata-aaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||||| |||||||||||||||| | |||  |  |||| || ||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  15372030 taaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 15371931  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||||||||||  ||||||| ||| |||||| |||| || ||||||||||||||||    
T  15371930 aaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 4623286 - 4623148
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| |||||||||||  ||||||| ||||| | | |||||||||||||||| |||  |||||||||||||||||  |||||||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  145 tgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||| || | |||||||||| |||||||||||||||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 185
Target Start/End: Complemental strand, 4219800 - 4219663
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||||| | || |||   ||||||||||||||||| |||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  147 aataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||| ||||||||||| || ||||||||||||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 7348685 - 7348559
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 158  Q
    |||||||||||||||||||||| | |||||||||||||||  ||| ||  |||||||||||||||||||||||| ||||| |||||||| ||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  159 cacgaagaccaaaagtgtaattaagcc 185  Q
    || || |||||||| ||||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaa-tacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    ||||||||| |||||||||| |||||||||||||| | ||||||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  146 gaataggccaaaacacgaagaccaaaagtgtaat 179  Q
    || || ||||||||| || |||||||| ||||||    
T  6019277 gagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 4624631 - 4624757
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    ||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||| |||||||||  | || ||||| ||||||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgt 4624730  T
Q  146 gaataggccaaaacacgaagaccaaaa 172  Q
    || ||||  ||||||||| ||| ||||    
T  4624731 gagtaggttaaaacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 6018452 - 6018315
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    ||||||||||   ||||| | ||||||||| |||| | |||||||||||||||||||| ||   |||||||||||||||||||| || ||||||||||||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaa-gataattttgttctgttttaaaaggacatgaccagtttcgt 6018354  T
Q  146 gaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    || |||  ||||||||||  ||||||| |||||||||||    
T  6018353 gagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 13814131 - 13814226
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattga-----atgaccgttttgttctgttttaaaagggcagg 134  Q
    ||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||||     ||||| ||||||||||| ||||||||||||||    
T  13814131 tgcgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaaagacatgacagttttgttctgatttaaaagggcagg 13814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 14462730 - 14462683
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatga 106  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatga 14462683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg 68  Q
    |||||||||| || ||||||||||||||||||||||   || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 27307428 - 27307511
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaa 92  Q
    |||||||||||| | ||||||| |||||||||||||| ||| |||||   ||||| || |||||||| |||| ||||| |||||    
T  27307428 agcatagggggtggatctaaaaatgtcatttctctgcatttctggagttgaaaataggaggtaggactaaaactacaaaaaaaa 27307511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 32305991 - 32305947
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||| ||||| |||||||||||||||||||||| |||| |||||    
T  32305991 catagcgggtaagtctaaaactgtcatttctctgtgtttctggag 32305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 156; Significance: 1e-82; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 4969 - 4790
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 4790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 5179 - 5334
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||    |||||||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaatagg----aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgtttt 5274  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||| || |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  5275 aaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 1e-82; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 12234505 - 12234326
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcctaa 12234326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 25447611 - 25447783
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||| ||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 15523603 - 15523780
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
     ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 11153516 - 11153692
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| || |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 22434547 - 22434724
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||    
T  22434646 gttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaacctaa 22434724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 25937846 - 25937667
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||||| ||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcctaa 25937667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 38962195 - 38962362
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 51020973 - 51020794
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||||||||| || || |||||||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcctaa 51020794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 22170306 - 22170482
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||| |||||||||| ||||||| || |||||| | |||| |||||||||| ||||||||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    | |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||| ||||||||||||  |||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 48526371 - 48526195
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||  |||||||| ||| |||| ||||||||||  |||||||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 22434340 - 22434179
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 45082606 - 45082429
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||| |||||||||||||  ||||| ||||||| ||| ||||||||||| ||||||||| |||||||| |||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaaacctaa 45082429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 54995437 - 54995614
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||| ||||| ||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||| ||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 20470895 - 20471062
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtt 191  Q
    ||||||| | |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagtt 20471062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 46193568 - 46193405
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  122 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 25447408 - 25447247
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 15523395 - 15523233
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 45082808 - 45082969
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 4219943 - 4220107
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| ||||||||||||||||| ||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 4220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 23494872 - 23494991
Alignment:
Q  69 gtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 168  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  169 aaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||    
T  23494972 aaaagtgtaattaagcctaa 23494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 12234713 - 12234874
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12234812  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||| || ||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  12234813 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 54995230 - 54995067
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 54995131  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||| ||||| |||||||||| |||||||| |||||| |||||||||||||||||| ||||    
T  54995130 aaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 48526565 - 48526723
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||||||| ||| ||||||||||| |||||||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  109 gttttgttc 117  Q
    |||||||||    
T  12503905 gttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 11153307 - 11153145
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||| ||||| ||| |||| ||||||||||||||| |||||||||| |||||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 25938056 - 25938217
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| ||||||| || |||| |||||  | ||||| || |||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttta 25938155  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||    
T  25938156 aaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 33109883 - 33110011
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 158  Q
    ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||  |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  159 cacgaagaccaaaagtgtaattaagccta 187  Q
    || || |||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 51021180 - 51021342
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| || ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||| |||||||| || |||||||||||| ||||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgtttt 51021278  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||    
T  51021279 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18751760 - 18751602
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||| ||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||  ||| ||||||||||||||| ||||||||||||||||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 71 - 188
Target Start/End: Original strand, 18763951 - 18764068
Alignment:
Q  71 aggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaa 170  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  171 aagtgtaattaagcctaa 188  Q
    ||||||||||||| ||||    
T  18764051 aagtgtaattaagtctaa 18764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 2118454 - 2118295
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||  ||||||| ||||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgtttt 2118355  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||    
T  2118354 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 20958264 - 20958403
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||| |||   |||||||||||||||||||||||||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||| |||| ||| ||||||||||||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 44892552 - 44892692
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||||||  ||||||||| ||| ||||||||||||||||||| ||||| |||| ||||    
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    |||| |||| |||||||||| |||||||| | |||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 48293735 - 48293592
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||  ||  ||||||| |||||||||  | ||||| || ||||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||| || |||||||||||| |||||||||||||||||||||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 35363028 - 35363146
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt-aaaagggcaggaccagtttcgtgaataggccaaaacacgaaga 166  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||| ||||| |||| ||||||||||||| ||||||||||||||| ||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  167 ccaaaagtgtaattaagcc 185  Q
     ||||||||||||||||||    
T  35363128 tcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 48294946 - 48295088
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacg-aaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    |||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||| |||||||||  |||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||| |||  |||||||||| |||||||| ||||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 48713749 - 48713893
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    | ||| ||||| |||||||||  |  |||||||||||||| ||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 43243685 - 43243803
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||||    
T  43243685 gcgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  144 gtgaataggccaaaacacga 163  Q
    |||| |||||||||||||||    
T  43243784 gtgagtaggccaaaacacga 43243803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 48708431 - 48708293
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 148  Q
    ||||||| |||||||| | |||||||  | |||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||| || |||||||      
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggt 48708332  T
Q  149 taggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||   |||||||||||||||||||||||    
T  48708331 taggccaaaacacatggaccaaaagtgtaattaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 168
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 168  Q
    |||| ||| ||| ||||||||||| || | |||||||||| ||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 44890658 - 44890518
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| ||||||||||||||| || ||||||| |||||||||  |||||| || ||   ||||||||||||||||||||||| ||||| ||||    
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||| | |||||||| |||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 16691072 - 16690939
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 148  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||   ||||||| |||||||||  |||||||||| ||||||||     
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgag 16690973  T
Q  149 taggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||  |||||||| | |||||||| |||||||||    
T  16690972 tagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 43281198 - 43281313
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||||  ||  |||||||||||||||||| |||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  147 aataggccaaaacacga 163  Q
    | |||||||||||||||    
T  43281297 agtaggccaaaacacga 43281313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 10258306 - 10258433
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 158  Q
    ||||| ||||||| ||| |||| | ||||||||||||||||||||  ||  ||||  ||||||||||||||||||||||| |||| ||| ||||||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  159 cacgaagaccaaaagtgtaattaagcct 186  Q
    ||||| ||||||||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||||||||||||||| ||| |||||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||| | | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  147 aataggccaaaacacgaagaccaaaagtgtaa 178  Q
    | || |||||||| ||| |||||||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 43242411 - 43242328
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaa 127  Q
    |||||||||||  ||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg 76  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 185
Target Start/End: Original strand, 16691481 - 16691616
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 148  Q
    ||||||| |||||||||| |||| |||||||||| |||||||||| |||||| || |||  ||||||| ||||| || ||| |||||||| ||||||||     
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatgtttaaagagg-caggaccattttcgtgag 16691579  T
Q  149 taggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||| ||||||||   || ||||||||||||||||||    
T  16691580 taggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 17504149 - 17503964
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| || |||||||| |||| | ||| ||| |||||| ||  | |||     
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacg 17504051  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtttaat 195  Q
    ||| |||||  ||| |||  |||||||||| ||||||||   || |||||  ||| |||||| ||| ||||||||||| | ||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagccttaatttaat 17503964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 55189626 - 55189528
Alignment:
Q  87 caaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||| |||  ||||||||| |||||||||||||  |||| |||  |||||||| |||||||||| || ||||| | ||||||||||    
T  55189626 caaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatataattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 44220781 - 44220861
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||| |||||||  ||||||| |||||||||  |||||||||||||| |||| |||  |||||||||||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctc 42  Q
    ||||||||||||||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 155; Significance: 4e-82; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 4576 - 4754
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||||| |||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  124 aaaagggcaggaccagtttcgtg 146  Q
    |||||||||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 4e-82; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 19830596 - 19830418
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 37786943 - 37786766
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 19590701 - 19590525
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 2659211 - 2659388
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||| |||||||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcctaa 2659388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 38858819 - 38858642
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| |||||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 4903050 - 4903203
Alignment:
Q  305 aaaaggaatccataaaatttattctcatcccaaattgga-gcttacggtggttaactaggtagaattgatggttggaaaaagttaaaaatcaccattact 403  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4903050 aaaaggaatccataaaatttattctcatcccaaattggaagcttacagtggttaactaggtagaattgatggttggaaaaagttaaaaatcaccattact 4903149  T
Q  404 tttcccacaatctgcttcctcctgcagtgctagagcattctcaagttcgacctc 457  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4903150 tttcccacaatctgcttcctcctgcagtgctagagcatgctcaagttcgacctc 4903203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||||||||||||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 35289272 - 35289448
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 32004985 - 32005159
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || ||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||| ||||||||||||| |||||||||||||| || ||||||||| || |||||||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||| ||||| ||||| |||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 34534162 - 34534338
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 19590909 - 19591073
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcctaa 19591073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 179  Q
    |||||||| ||||||| ||||||||||||||| |||  |||||||||| |||||||| ||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 4478076 - 4478247
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||||||| |||  | || |    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||| ||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 38859025 - 38859189
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 38859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 2659000 - 2658837
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| |||||||||||||||||||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||| ||||||||| ||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 34533952 - 34533789
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| ||||||||||||||||||||||||  | ||||| || ||||||||| ||||| ||||||||||||||||||||||||| |||| |||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 32004774 - 32004612
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||||||| |||||  | ||||| || |||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 37787153 - 37787315
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||  |||||||||||||| |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  126 aagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctaa 37787315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 28584326 - 28584466
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| || ||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    |||||||||||||| ||||| ||| ||||||||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 35289063 - 35288903
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||||||||||||||||| |||| |||||  | |||||  |  |||||||||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 35288964  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  35288963 aaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 457
Target Start/End: Original strand, 4906435 - 4906580
Alignment:
Q  312 atccataaaatttattctcatcccaaattggagcttacggtggttaactaggtagaattgatggttggaaaaagttaaaaatcaccattacttttcccac 411  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||||| || || |||||||||| ||||||||| |||||||||| ||||    
T  4906435 atccataaaatttattctcagcccaaatgggagcttaccgtggttaattaggtagaactggtgcttggaaaaaggtaaaaatcatcattactttttccac 4906534  T
Q  412 aatctgcttcctcctgcagtgctagagcattctcaagttcgacctc 457  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||    
T  4906535 aatctgcttcctcctgcagttccagagcatgctcaagttcgacctc 4906580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 38161093 - 38160948
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||| |||  ||||||||||||||||||||||||||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaagcctaa 38160948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 19830804 - 19830965
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||| |||||| ||||||||||||||||||||  ||||||||||| ||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 28583577 - 28583437
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||| || |||||||||||||||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  147 aataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    | ||||||||||||||| |||||||||||||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 29100011 - 29099863
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||| ||| ||||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaa 172  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 23952892 - 23952727
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| ||| |  | ||||| |  ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  23952892 ctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 23952793  T
Q  124 aaaagggcaggaccagtttcgtgaata-ggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||| ||||| |||||||| || || |||||||||| ||||||||||||||||||||||||    
T  23952792 aaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagcctaa 23952727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| ||  ||||||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||| ||||||||||   |||| ||||||||||||||| ||||||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 414 - 457
Target Start/End: Complemental strand, 4929419 - 4929376
Alignment:
Q  414 tctgcttcctcctgcagtgctagagcattctcaagttcgacctc 457  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  4929419 tctgcttcctcctgcagtgctagagcatgctcaagttcaacctc 4929376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgttttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 457
Target Start/End: Complemental strand, 4924099 - 4924041
Alignment:
Q  399 ttacttttcccacaatctgcttcctcctgcagtgctagagcattctcaagttcgacctc 457  Q
    ||||||| ||||| ||||||||||||||||||||| | ||||| ||||||||| |||||    
T  4924099 ttactttccccacgatctgcttcctcctgcagtgccaaagcatgctcaagttcaacctc 4924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 35579074 - 35579028
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggag 35579028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 35579256 - 35579298
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttttt 51  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgttttt 35579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 457
Target Start/End: Complemental strand, 5823114 - 5823060
Alignment:
Q  403 ttttcccacaatctgcttcctcctgcagtgctagagcattctcaagttcgacctc 457  Q
    ||||||||  ||||| ||||||||||||||||||||||| ||| ||||| |||||    
T  5823114 ttttcccatcatctgtttcctcctgcagtgctagagcatgctcgagttcaacctc 5823060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26026688 - 26026734
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggag 26026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 48247767 - 48247721
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggag 48247721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 4e-82; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 20741276 - 20741098
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 10900299 - 10900475
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 18257313 - 18257135
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 11276951 - 11277127
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 15828010 - 15828187
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||| ||||||||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 28472812 - 28472634
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
     |||||||||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 28472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 29860001 - 29859823
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
     |||||||||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 29859823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 12935528 - 12935704
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||| || ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 11445163 - 11444984
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
     |||| |||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11444984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 31470685 - 31470860
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| | ||||||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 1149802 - 1149977
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttt-tggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccg 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||| ||||||||| |||||||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 2319832 - 2319669
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||| |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctaa 2319669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 12935318 - 12935154
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 12935154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    |||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 11445371 - 11445535
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11445535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 22219737 - 22219901
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 22219901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 23074164 - 23073998
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||           |||||||||| ||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaat-----------gataattgaaggacc 23074076  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 23075512 - 23075675
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| |||||||||  ||||| | || ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 4811535 - 4811372
Alignment:
Q  22 ggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||| |||| ||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  122 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||| |||||||||||||| ||| |||||| ||   |||||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 31470476 - 31470314
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||| ||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 20741485 - 20741650
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaa---atgataattgaatgaccgttttgttctgt 120  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||| ||||   |||||||||||| ||||||||||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  121 tttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18505080 - 18504922
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || |||||||||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgtttt 18504981  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18504980 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 11276760 - 11276589
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||||| || |||||||||||||||  ||||||||||| ||||||| |||| |||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||| |||| ||||||| ||| ||| ||||||||||  ||| ||| ||||||||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 18257565 - 18257682
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagac 167  Q
    |||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  168 caaaagtgtaattaagcc 185  Q
    ||||||| ||||||||||    
T  18257665 caaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 29033577 - 29033436
Alignment:
Q  43 tgcgtttttggag-aataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtt 141  Q
    ||||||||||||| || |||||||||||||||| ||||  | ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  142 tcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||  ||||||||| |||| |||||||||||||||||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 15827794 - 15827639
Alignment:
Q  32 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt--tttgttctgttttaaaag 128  Q
    |||||||| ||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||| ||||| ||||||  |||||| |||||||||||    
T  15827794 tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaag 15827695  T
Q  129 ggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    | ||| ||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  15827694 gacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 3835135 - 3835268
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 148  Q
    ||||||| |||||||||||||||||||||||||| | ||||||||||||||| || |||  |||||||||||||||||  |||||||||| ||||||||     
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgag 3835234  T
Q  149 taggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||| ||||||||   ||||||||||||||||||    
T  3835235 taggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 29035040 - 29035180
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | ||||||| |||| ||||||||||| ||||||||||||||| | || |||  |||||||||||||||||||||||  |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||| ||||| ||||||||| ||| |||||||||||||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 1149553 - 1149463
Alignment:
Q  97 aattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 18296285 - 18296142
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||||  | || |||     
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||| || | |||||||||| ||| |||| | |||||||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaagcctaa 18296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 4811675 - 4811801
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 158  Q
    ||||| || |||| || ||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||| || ||||||| ||| ||||||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  159 cacgaagaccaaaagtgtaattaagcc 185  Q
    ||||| || ||||||| ||||||||||    
T  4811775 cacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 35163557 - 35163627
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaa 80  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||   ||||| || |||||||| ||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaa 35163627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  129 ggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||| |||||||| | || ||||| |||| |||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 32836367 - 32836407
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  32836367 agcataaggggtaggtctaaaactgttatttctcttcgttt 32836407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 2e-81; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 12572040 - 12571855
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggt-aggacgaaaaatacaacaaaaatgataattgaatgac 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  108 cgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttta 193  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaattta 12571855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 19176659 - 19176838
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 19176838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 44831614 - 44831799
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtttaa 194  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| ||||||||||| |||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctaattttaa 44831799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 181  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 41681306 - 41681132
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgtt 111  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  112 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 9930026 - 9930203
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
     ||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 11656630 - 11656452
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccg 109  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11656452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||| ||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 31133396 - 31133213
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttt 192  Q
    |||||||| |||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcctatgttt 31133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 9178005 - 9178180
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| || || ||||||| |||||||||||||| ||||| ||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||| |||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 13225023 - 13225185
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 19176451 - 19176287
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 19176287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 44831408 - 44831246
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 41681518 - 41681679
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||  ||||||||||||||| |||||  | ||||| |  ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41681617  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  41681618 aaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 33743082 - 33742919
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 33742919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 33743290 - 33743417
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  111 tttgttctgttttaaaagggcaggacca 138  Q
    ||||||||||||||||| ||||| ||||    
T  33743390 tttgttctgttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||      ||||||||| ||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||| | |||||||||||||  ||||||||| |||||||| ||| ||||||||||| || |||||||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 9929070 - 9928912
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||  || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 9928971  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||    
T  9928970 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 11656841 - 11657003
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 31133605 - 31133764
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||| ||||||||||||| ||| |||||  | ||||| || |||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 34540934 - 34541096
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaa 125  Q
    |||||| |||||||||||||||| |  ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  126 aagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 34541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 12572235 - 12572393
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12572334  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||| ||| ||| |||||||||| ||| ||||||||||| ||||||||||||||||||    
T  12572335 aaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | |||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||| ||| ||| |||||||||| ||||| ||||||||| |||||||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 4629952 - 4629795
Alignment:
Q  31 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 129  Q
    ||||||||||| ||||||| |||||  | ||||| || |||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  130 gcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||| ||||||||||||  |  ||||||| |||||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 11336959 - 11337069
Alignment:
Q  77 aaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgt 176  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||| || |||||||||||||||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  177 aattaagccta 187  Q
    |||||||||||    
T  11337059 aattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 8073956 - 8074097
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    ||||||||||||  ||||||||||| |  |||| ||||| |||||||| ||||||||||| ||   |||||||||||||||||||| || || || ||||    
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||| |||||||||| ||| |||||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 10918264 - 10918123
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| ||||||||||||||| || ||||||| |||||||||||||| ||||| |||  ||||| ||||||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  147 aataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    | |||  |||||||||| ||| |||| ||||||||| |||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaaacctaa 10918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 43958326 - 43958267
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaa 103  Q
    |||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaa 43958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 18805337 - 18805292
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggag 18805292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  152 gccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||| |||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 9177793 - 9177724
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaat 93  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||| ||||||| ||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 43958254 - 43958206
Alignment:
Q  140 tttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||| |||  ||||||||||||||||||||| |||||||| ||||    
T  43958254 tttcgtgagtagatcaaaacacgaagaccaaaagtataattaagtctaa 43958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 7e-81; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 39555946 - 39556122
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 31779021 - 31779199
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 5137156 - 5136978
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||| ||||| |||||||| | ||||||||||||| |||||||||||||||||| ||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 20840734 - 20840556
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaag 189  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaag 20840556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 24300925 - 24301104
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||| |||||||||| |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 24301104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 37727105 - 37726928
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||| |||||||||||||||| ||||||||||| |  || ||||||||||| ||||||||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 23644638 - 23644461
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 48453144 - 48452986
Alignment:
Q  30 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |    
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  130 gcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcctaa 48452986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 26837725 - 26837903
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||| |||| ||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26837903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 30104657 - 30104479
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||| | || ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 30104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 32535330 - 32535508
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaat-----gataattgaatg 105  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||     |||||||||| |    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  106 accgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
     |||||||||||||||||| | || |||||||||||||| |||  |||||||||| || ||||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 27393946 - 27394123
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||||||| || |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||| |||||||||  |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 43973610 - 43973441
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||  | || |||||||| |||| |||||||||| |||||||||||||||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 181  Q
    |||||||||||||||| ||||||| |||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 43973824 - 43973988
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 43973988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 26274936 - 26275114
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||| |||||||||||||||| |||||||||||||||| |||| |||||||| | | |||||| | ||||||| |||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaaacctaa 26275114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 17464860 - 17465038
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaa-tacaacaaaaatgataattgaatgac 107  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| |||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  108 cgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||| |||||||||||   |||||||||| ||  ||||||||||||||| |||||||| |||||||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 37727314 - 37727475
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 17464652 - 17464488
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||| | ||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 17464553  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  17464552 aaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcctaa 17464488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 20840945 - 20841107
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 27393822 - 27393660
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||| |||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 29801798 - 29801964
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    |||||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  122 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcctaa 29801964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 39555739 - 39555577
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 4275748 - 4275911
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 31778814 - 31778652
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||| ||||||||||||||||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||| |||| |||||||||| ||||||||||||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 23644849 - 23645010
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||  | |||  | ||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||| ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 25853395 - 25853234
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 5137365 - 5137529
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||| |||||| |||||||||||||||||||| |||| ||||||||| ||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 5137529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 30098147 - 30098309
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||| ||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 30098246  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||| |||||||||||||| || | |||||||||| ||||||||||||||||||||||    
T  30098247 aaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 22424975 - 22424811
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||| ||| ||||||||||| | |||||  ||||||||  |||||||||||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcctaa 22424811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 32535120 - 32534962
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| | || | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 32535021  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||| |||||||||| |||||||| || |||||||||||| ||||||||||||||||||    
T  32535020 aaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 29801477 - 29801356
Alignment:
Q  64 ggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 163  Q
    |||||||| |||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  164 agaccaaaagtgtaattaagcc 185  Q
     |||||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 26837521 - 26837358
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||| |||||||| |||||||||| || | |||||||| ||||||||| ||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||| ||||||||| | ||||||||||||||||||||  |||||||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacg-agaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 50116812 - 50116954
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||| || | |||||||||| || ||||||||||||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26274728 - 26274570
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||  |||||||| |||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| ||| |||||| || | || ||||| |||||||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 23228414 - 23228552
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    |||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||| |||  |||||||| |||||||||||||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgt 23228512  T
Q  146 gaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    || ||||||||||||||  |||||||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 41047083 - 41047239
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| ||| ||||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggac-gttttattctgtttt 41047181  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||| ||| ||||||||||||| |||||||||||| ||||| | |||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 51474737 - 51474882
Alignment:
Q  44 gcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    |||||||||||| |||||| | |||||||||||||||||| ||||||||||||||| | || |||  ||||||| ||||||||||||||| ||||| |||    
T  51474737 gcgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaattt 51474836  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||| || |||||||||||   |||||||||||||||||||||||    
T  51474837 cgtgagtatgccaaaacacgggaaccaaaagtgtaattaagcctaa 51474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 32697106 - 32697244
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||  ||| | |||||    
T  32697106 cgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  145 tgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||| ||||| ||||||||| |||||||| | |||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  71 aggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaa 170  Q
    ||||| |||| | |||||||||||||||  ||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  171 aagtgtaattaagc 184  Q
    ||||||||||||||    
T  51473442 aagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 37220698 - 37220555
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||||||||||||| |||| |||  |||| |||||||||||||| ||| || |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||| |||||||||| |||| |||||||||||||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 45966076 - 45965936
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| | |||||||||| ||| ||||||||| ||||| |||||||||| ||| |||  ||||||| ||||||||||| ||||||  |  ||||||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtg 45965977  T
Q  147 aataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    | || |||||||||||| |||||||||||||||||||||||    
T  45965976 agtatgccaaaacacgaggaccaaaagtgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 25420542 - 25420684
Alignment:
Q  41 tctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagt 140  Q
    ||||| |||||| || ||||||||||||||| |||||||||| |||||||||| ||||||||| |||  |||| |||| ||||||||||||  || || |    
T  25420542 tctgcatttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaat 25420641  T
Q  141 ttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||||| |||| ||||| |||| || ||||||||||||||||    
T  25420642 ttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 18010162 - 18010265
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaa 156  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||| | |||| |||||||| ||| | ||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaa 18010261  T
Q  157 aaca 160  Q
    ||||    
T  18010262 aaca 18010265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 37222040 - 37222118
Alignment:
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||| |||||||||| ||| |||| |||| |||||||||| |||||||||||||||||||||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 25419285 - 25419145
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaa-tgataattgaatg-accgttttgttctgttttaaaagggcaggaccagtt 141  Q
    ||||||||||||  |||||||||||  ||||| |||| | ||| ||||| ||||||||||| | || ||||||||||||||||||||||||| || | ||    
T  25419285 gcgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatt 25419188  T
Q  142 tcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    |||||| || || |||||||||||||||||||| |||| ||||    
T  25419187 tcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 55192293 - 55192216
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaa 86  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| |||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaactacaa 55192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 23227398 - 23227261
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||||| | |||||||||||| |||||||||||| ||||| | |||   |||||||||||| |       ||||||| |||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtttca------gaggaccatttt 23227305  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||| || ||||||||||  ||||||||||| ||||| |||||    
T  23227304 cgtgagtaagccaaaacacagagaccaaaagtctaattgagcct 23227261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 49407972 - 49407925
Alignment:
Q  8 tagcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggag 49407925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggg 69  Q
    |||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 37075864 - 37075818
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggag 37075818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 55389967 - 55390146
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-ggtaggacgaaaaatacaacaaaaatgataattgaatgac 107  Q
    |||||||| ||| || ||||||||||||||||| ||||||| |||||    |||| ||| |||||||| |||| ||||| ||| || ||| || | ||||    
T  55389967 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaacat-atagtttagtgac 55390065  T
Q  108 cgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
      |||||||   ||| |||| || ||||||| |||||||||| ||  ||||  ||| ||||||||||||||||||||||||    
T  55390066 gattttgtttgatttaaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagcctaa 55390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 27200062 - 27200240
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||   ||||| || |||| ||| |||| | ||| ||| |||||| ||  | |||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    || ||||||  ||| |||  ||||| |||| ||||||||   || |||||  | | ||||||||||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 27200240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 33412383 - 33412417
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||| ||||||||||||||||    
T  33412383 gggggtaggtctaaaactatcatttctctgcgttt 33412417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 27199878 - 27199838
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||  |||| |||||||||    
T  27199878 agcatagggggtaggtctaaaactgatatttatctgcgttt 27199838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 32695830 - 32695706
Alignment:
Q  58 taaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaa 157  Q
    ||||||| |||  ||||| |||| | |||||||||| ||||| | | |||  |||||||||||||||||| | ||  | || |||||| | |||||||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  158 acacgaagaccaaaagtgtaattaa 182  Q
    | | || |||||||| |||||||||    
T  32695730 atatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 52375824 - 52375880
Alignment:
Q  132 aggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||| |||||||| | || |||||  ||| ||||||||||||||||||||||||    
T  52375824 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 52375880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 7e-81; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 11090695 - 11090519
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 239528 - 239350
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcctaa 239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 40027316 - 40027139
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 18451200 - 18451379
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
     |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18451379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 40815714 - 40815893
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 40815893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 22374496 - 22374318
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 1978284 - 1978106
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||||| ||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 43058509 - 43058333
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||| |||||||||||||| |||| | ||||||||||||| || ||||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 26538273 - 26538096
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    | ||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 28616788 - 28616613
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccg 109  Q
    |||||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  112 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||| | ||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 26538454 - 26538627
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| ||| |  | |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26538627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 3025641 - 3025463
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||| ||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||| || |||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatcaaacctaa 3025463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||| ||||||||||||||||||| |||||||| ||| ||||||||| |  |||||||||||||||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 186 - 307
Target Start/End: Complemental strand, 16195057 - 16194936
Alignment:
Q  186 taagtttaatacatgttacacttacatgaaatacctggtcttccttaactaaattgggtttcatttatatattgattattaaatgagagaagaaggattg 285  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16195057 taagtttaatacatgttacacttacatgaaatacctagtcttccttaactaaattgggtttcatttatatattgattattaaatgagagaagaaggattg 16194958  T
Q  286 tgctcccctgcatttgcataaa 307  Q
    ||||||||||||||||||||||    
T  16194957 tgctcccctgcatttgcataaa 16194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 7446519 - 7446341
Alignment:
Q  11 catagggggtaggtctaaaa----ctgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatga 106  Q
    ||||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  107 ccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||||| || |||||||||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 20444890 - 20444748
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||| | ||||||||||||| ||||||||||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 7446730 - 7446894
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||||||||||||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||||||||||||||| || | |||||||||| || ||||| |||||||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcctaa 7446894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 18450991 - 18450829
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 20440436 - 20440579
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||| |||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20440436 gcgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 20440534  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||| | ||||||||||||| ||||||||||||||||||||||||    
T  20440535 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 20440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 40815506 - 40815338
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttt 192  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagacaaagttt 40815338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 11090904 - 11091067
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||| ||||||||| |||||  | ||||| || | |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 22374709 - 22374872
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 40027524 - 40027682
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| |||||| |||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 40027623  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  40027624 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 35781067 - 35781207
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||| ||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    |||| ||||||||||||||| || |||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 43058717 - 43058880
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctaa 43058880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 28616998 - 28617160
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 35779849 - 35779708
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |||  |||||||||||||||||| |||||||||| ||||    
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||| || | |||||||||| |||||||||||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||  |||||||||||||||||||| |||| ||||||||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| |||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 1978528 - 1978656
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 158  Q
    ||||| || |||||||| |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  159 cacgaagaccaaaagtgtaattaagccta 187  Q
    ||| | |||||||||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 8972378 - 8972239
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||||| ||||| ||||    
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||  | |||||||||||| |||||||||||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 28847123 - 28847242
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagac 167  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||| |||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  168 caaaagtgtaattaagccta 187  Q
    ||||| ||||||||||||||    
T  28847223 caaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 15552459 - 15552596
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    |||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| || |||||    
T  15552459 cgtttttggagggcaaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcg 15552557  T
Q  145 tgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||| ||||||||||||  | |||||||||||||||||||    
T  15552558 tgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-gaccgttttgttctgtttta 8425416  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||| || | ||||| |||||||| ||||||||||||| | ||||||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 3025848 - 3026006
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  125 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||| |||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 14432525 - 14432689
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| ||||||| |||||||||| |||||||||  ||| |||| |||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||| |||| |||||||||| ||| ||||||||||||||| |||||||| |||||||||| ||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaaggctaa 14432689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 15551641 - 15551501
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||| |||| |||  ||||||| |||||||||| |||| ||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    ||||| ||  ||||||||||| |||||||||||||||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 28143400 - 28143578
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| ||  ||||||| |||| | ||| ||| |||||| || |  |||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
     ||||||||  ||| |||  |||||||||| ||||||||   || |||||  ||| ||||||||||| ||||||||||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcctaa 28143578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 1841 - 1665
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 2051 - 2218
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtt 191  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagtt 2218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 134042 - 134221
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    |||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 134221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 142; Significance: 2e-74; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 64478 - 64301
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||||| ||||| ||||||||||| || | |||||||||| ||||||||||||||||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  70 taggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacca 169  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| |||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  170 aaagtgtaattaa 182  Q
    |||||||||||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 205738 - 205911
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||  ||||||| |||| | ||| ||| |||||| || |  |||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||||||  ||| |||  |||||||||| |||||||| | || |||||   || ||| |||||||||||||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 1116 - 1286
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    ||||| |||||||||||| ||||| ||||||||| ||| |  | ||||| || |||||||||||| || |||||||||||||||||||| ||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttg 1215  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||    
T  1216 ttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 42528 - 42706
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||| ||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 188  Q
    ||||||||||||||||||||||||| | ||||||| ||| ||| ||||||||||| | |||||||| |||||||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcctaa 42706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 42339 - 42172
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| || ||  | ||||| || |||| ||| |||||| |||||||||||||||||||||||||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||||||||||| ||||||| ||||||||||| ||| |||||||||||  || ||||||||||||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||| |  ||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 10032 - 9935
Alignment:
Q  85 aacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    ||||||| ||||||||||| |||| ||||||||| | ||||||||||| || ||||||||||||||||| ||||||||| |||||||| |||||||||    
T  10032 aacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 10797 - 10643
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||||| ||||| ||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 163  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacga 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 11007 - 11168
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 11106  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  11107 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 19001 - 18834
Alignment:
Q  18 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttc 117  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||  |||||||||||     
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  118 tgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||| |||||||||||||| ||||||||||||  | ||||||||||||||| ||||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 19069 - 19166
Alignment:
Q  88 aaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 28662 - 28789
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 158  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  159 cacgaagaccaaaagtgtaattaagcct 186  Q
    ||||| ||||||||||||||||| ||||    
T  28762 cacgatgaccaaaagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  109 gttttgttc 117  Q
    |||||||||    
T  16572 gttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  124 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 168  Q
    |||| ||| ||| ||||||||||| || | |||||||||| ||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 43 - 184
Target Start/End: Complemental strand, 709 - 568
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| || ||||||| |||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  143 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||| || |||||||||||||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 61862 - 62000
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||   ||||||||| ||||||||||| ||||||| ||||    
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||| ||| ||||||||||| || |||||||||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 187  Q
    |||||||| |||||||| ||||||| || |||||||| ||||||||||||||| || |||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 8453 - 8551
Alignment:
Q  84 caacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||| | ||| |||||||| |||||||||||||||||||||    
T  8453 caacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 589 - 454
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| |||||||||| | ||||||||||||| |||||||||||||||||||| |||  || |||| |||||||||||  || ||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  144 gtgaataggccaaaacacgaagaccaaaagtgtaatta 181  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 7691 - 7784
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggac 136  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||| |||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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