View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2848_high_55 (Length: 265)

Name: NF2848_high_55
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2848_high_55
NF2848_high_55
[»] chr5 (48 HSPs)
chr5 (9-187)||(5819298-5819476)
chr5 (9-185)||(2865124-2865300)
chr5 (9-185)||(18183338-18183514)
chr5 (9-195)||(19359126-19359312)
chr5 (9-186)||(8647437-8647614)
chr5 (9-185)||(8460930-8461106)
chr5 (9-185)||(24362205-24362381)
chr5 (9-185)||(15708971-15709146)
chr5 (13-185)||(14215616-14215788)
chr5 (9-185)||(29455111-29455287)
chr5 (9-182)||(15372242-15372415)
chr5 (9-185)||(164560-164736)
chr5 (25-182)||(5818932-5819090)
chr5 (20-185)||(14463901-14464065)
chr5 (25-185)||(19359520-19359681)
chr5 (25-182)||(18182973-18183131)
chr5 (25-185)||(8647822-8647983)
chr5 (26-187)||(164189-164350)
chr5 (9-183)||(24331929-24332107)
chr5 (25-179)||(24361843-24361997)
chr5 (25-185)||(8461315-8461476)
chr5 (25-188)||(2864751-2864915)
chr5 (9-185)||(16018589-16018763)
chr5 (23-185)||(25000471-25000634)
chr5 (25-179)||(24325218-24325372)
chr5 (25-185)||(24331559-24331722)
chr5 (25-183)||(14215243-14215402)
chr5 (9-168)||(25000107-25000266)
chr5 (23-182)||(16018969-16019129)
chr5 (25-185)||(29454740-29454901)
chr5 (43-186)||(7349420-7349563)
chr5 (25-188)||(15709353-15709516)
chr5 (65-184)||(4222147-4222266)
chr5 (26-188)||(15371868-15372030)
chr5 (45-186)||(4623147-4623286)
chr5 (59-186)||(7348558-7348685)
chr5 (46-172)||(4624631-4624757)
chr5 (47-195)||(4219653-4219800)
chr5 (186-249)||(6622403-6622466)
chr5 (46-184)||(6018315-6018452)
chr5 (47-151)||(6019177-6019282)
chr5 (43-134)||(13814131-13814226)
chr5 (59-106)||(14462683-14462730)
chr5 (9-68)||(24325580-24325639)
chr5 (9-55)||(16752711-16752757)
chr5 (9-92)||(27307428-27307511)
chr5 (23-185)||(41834443-41834605)
chr5 (11-55)||(32305947-32305991)
[»] chr1 (42 HSPs)
chr1 (9-185)||(50970647-50970823)
chr1 (9-185)||(18984119-18984295)
chr1 (16-185)||(5540194-5540363)
chr1 (9-185)||(29869620-29869796)
chr1 (9-188)||(8678911-8679089)
chr1 (9-188)||(33144288-33144467)
chr1 (16-186)||(29306952-29307122)
chr1 (9-182)||(5962947-5963120)
chr1 (9-182)||(15173099-15173272)
chr1 (16-185)||(15646571-15646740)
chr1 (9-187)||(21856412-21856590)
chr1 (9-185)||(9018973-9019149)
chr1 (9-188)||(17433213-17433392)
chr1 (16-186)||(29307317-29307488)
chr1 (11-185)||(26859431-26859604)
chr1 (9-183)||(39154021-39154195)
chr1 (25-184)||(5539817-5539977)
chr1 (16-185)||(9019338-9019508)
chr1 (23-183)||(17433597-17433758)
chr1 (25-188)||(29870003-29870167)
chr1 (25-183)||(21856044-21856203)
chr1 (27-185)||(50970278-50970437)
chr1 (25-184)||(8678542-8678702)
chr1 (26-184)||(4636356-4636515)
chr1 (25-185)||(15173478-15173638)
chr1 (25-185)||(18984503-18984664)
chr1 (25-177)||(33143925-33144078)
chr1 (25-185)||(39154404-39154565)
chr1 (45-185)||(52268290-52268430)
chr1 (68-194)||(26859050-26859176)
chr1 (25-185)||(15646192-15646353)
chr1 (11-125)||(4636033-4636146)
chr1 (25-184)||(5962579-5962739)
chr1 (69-183)||(52269177-52269291)
chr1 (99-185)||(2733416-2733502)
chr1 (25-186)||(17112281-17112442)
chr1 (78-160)||(47827026-47827108)
chr1 (110-183)||(47826966-47827039)
chr1 (15-49)||(17088516-17088550)
chr1 (105-185)||(50419726-50419806)
chr1 (9-45)||(17088290-17088326)
chr1 (9-49)||(39485200-39485240)
[»] chr6 (36 HSPs)
chr6 (9-188)||(10900299-10900478)
chr6 (9-185)||(20741100-20741276)
chr6 (9-188)||(11276951-11277130)
chr6 (9-185)||(18257137-18257313)
chr6 (9-185)||(15828010-15828186)
chr6 (9-185)||(28472637-28472812)
chr6 (9-185)||(29859826-29860001)
chr6 (9-184)||(31470685-31470860)
chr6 (11-188)||(1149802-1149980)
chr6 (11-185)||(12935528-12935702)
chr6 (9-185)||(11444987-11445163)
chr6 (25-194)||(2319663-2319832)
chr6 (25-195)||(12935147-12935318)
chr6 (16-182)||(10899942-10900109)
chr6 (9-184)||(18505288-18505463)
chr6 (9-182)||(2322588-2322760)
chr6 (9-185)||(23073999-23074164)
chr6 (25-185)||(11445371-11445532)
chr6 (25-185)||(22219737-22219898)
chr6 (25-185)||(23075512-23075673)
chr6 (22-187)||(4811370-4811535)
chr6 (25-185)||(31470315-31470476)
chr6 (16-185)||(11276590-11276760)
chr6 (68-187)||(18257565-18257684)
chr6 (25-182)||(18504922-18505080)
chr6 (25-185)||(20741485-20741649)
chr6 (43-183)||(29033436-29033577)
chr6 (49-182)||(3835135-3835268)
chr6 (44-185)||(18296145-18296285)
chr6 (32-184)||(15827639-15827794)
chr6 (43-183)||(29035040-29035180)
chr6 (97-185)||(1149465-1149553)
chr6 (59-186)||(4811675-4811802)
chr6 (129-188)||(22534214-22534273)
chr6 (10-80)||(35163557-35163627)
chr6 (9-188)||(32836367-32836545)
[»] chr3 (62 HSPs)
chr3 (9-188)||(39555946-39556125)
chr3 (9-185)||(31779021-31779197)
chr3 (9-182)||(5136983-5137156)
chr3 (9-182)||(41046703-41046876)
chr3 (11-185)||(20840560-20840734)
chr3 (9-185)||(24300925-24301101)
chr3 (9-185)||(37726929-37727105)
chr3 (9-185)||(23644462-23644638)
chr3 (16-185)||(43973441-43973610)
chr3 (9-183)||(25853596-25853770)
chr3 (11-188)||(32535330-32535511)
chr3 (9-185)||(26837725-26837900)
chr3 (9-185)||(30104482-30104657)
chr3 (30-185)||(48452989-48453144)
chr3 (9-185)||(27393946-27394122)
chr3 (9-181)||(22425182-22425354)
chr3 (9-182)||(26274936-26275108)
chr3 (25-185)||(43973824-43973985)
chr3 (9-185)||(17464860-17465037)
chr3 (25-188)||(37727314-37727478)
chr3 (25-185)||(27393661-27393822)
chr3 (25-185)||(20840945-20841106)
chr3 (25-185)||(39555578-39555739)
chr3 (23-185)||(29801798-29801961)
chr3 (44-182)||(25612381-25612519)
chr3 (25-185)||(4275748-4275909)
chr3 (25-185)||(31778653-31778814)
chr3 (25-186)||(25853233-25853395)
chr3 (25-185)||(17464491-17464652)
chr3 (25-185)||(23644849-23645010)
chr3 (25-185)||(30098147-30098308)
chr3 (25-185)||(5137365-5137526)
chr3 (43-186)||(50116812-50116955)
chr3 (25-194)||(22424805-22424975)
chr3 (25-182)||(32534962-32535120)
chr3 (25-182)||(26837363-26837521)
chr3 (64-186)||(29801355-29801477)
chr3 (25-182)||(26274570-26274728)
chr3 (46-187)||(23228414-23228554)
chr3 (25-182)||(24300560-24300717)
chr3 (25-182)||(41047083-41047239)
chr3 (45-184)||(32697106-32697244)
chr3 (44-185)||(51474737-51474879)
chr3 (44-185)||(37220557-37220698)
chr3 (41-183)||(25420542-25420684)
chr3 (47-185)||(45965938-45966076)
chr3 (71-184)||(51473429-51473542)
chr3 (57-151)||(18010162-18010256)
chr3 (109-185)||(37222040-37222116)
chr3 (9-190)||(55192113-55192293)
chr3 (44-184)||(25419145-25419285)
chr3 (8-55)||(49407925-49407972)
chr3 (9-69)||(29801532-29801592)
chr3 (43-122)||(23227319-23227398)
chr3 (9-55)||(37075818-37075864)
chr3 (9-185)||(27200062-27200237)
chr3 (15-49)||(33412383-33412417)
chr3 (132-185)||(52375824-52375877)
chr3 (110-182)||(22370599-22370671)
chr3 (9-49)||(27199838-27199878)
chr3 (58-182)||(32695706-32695830)
chr3 (109-185)||(49407796-49407872)
[»] chr7 (33 HSPs)
chr7 (9-182)||(19830423-19830596)
chr7 (9-185)||(19590525-19590701)
chr7 (9-185)||(37786767-37786943)
chr7 (9-185)||(38858643-38858819)
chr7 (11-185)||(2659211-2659385)
chr7 (9-182)||(29100220-29100393)
chr7 (11-188)||(32004985-32005162)
chr7 (11-185)||(35289272-35289446)
chr7 (9-182)||(4641443-4641616)
chr7 (11-185)||(34534162-34534336)
chr7 (16-179)||(23953105-23953268)
chr7 (25-185)||(19590909-19591070)
chr7 (16-182)||(4478076-4478242)
chr7 (25-185)||(2658839-2659000)
chr7 (25-185)||(38859025-38859186)
chr7 (25-185)||(34533791-34533952)
chr7 (26-185)||(32004614-32004774)
chr7 (27-185)||(37787153-37787312)
chr7 (26-188)||(35288900-35289063)
chr7 (44-184)||(28584326-28584466)
chr7 (43-185)||(38160951-38161093)
chr7 (25-185)||(19830804-19830964)
chr7 (25-172)||(29099863-29100011)
chr7 (25-185)||(23952730-23952892)
chr7 (47-185)||(28583439-28583577)
chr7 (25-182)||(4641828-4641983)
chr7 (16-51)||(32427397-32427432)
chr7 (9-55)||(35579028-35579074)
chr7 (9-51)||(35579256-35579298)
chr7 (9-55)||(26026688-26026734)
chr7 (9-55)||(48247721-48247767)
chr7 (121-185)||(39137014-39137079)
chr7 (132-188)||(27245200-27245256)
[»] scaffold0295 (2 HSPs)
scaffold0295 (9-185)||(4793-4969)
scaffold0295 (25-183)||(5179-5334)
[»] chr2 (42 HSPs)
chr2 (11-182)||(11090524-11090695)
chr2 (9-185)||(239353-239528)
chr2 (9-185)||(40027140-40027316)
chr2 (9-182)||(40815714-40815887)
chr2 (9-185)||(18451200-18451376)
chr2 (9-185)||(22374320-22374496)
chr2 (9-186)||(43058332-43058509)
chr2 (9-185)||(1978108-1978284)
chr2 (11-188)||(28616610-28616788)
chr2 (9-185)||(26538097-26538273)
chr2 (12-182)||(14432145-14432315)
chr2 (9-179)||(3025472-3025641)
chr2 (16-185)||(26538454-26538624)
chr2 (16-182)||(8425736-8425902)
chr2 (11-185)||(7446342-7446519)
chr2 (25-185)||(7446730-7446891)
chr2 (44-185)||(20444749-20444890)
chr2 (25-185)||(18450830-18450991)
chr2 (25-188)||(40815342-40815506)
chr2 (25-182)||(40027524-40027682)
chr2 (25-185)||(11090904-11091065)
chr2 (44-185)||(20440436-20440576)
chr2 (25-185)||(22374709-22374870)
chr2 (44-187)||(35779706-35779849)
chr2 (44-184)||(35781067-35781207)
chr2 (25-185)||(28616998-28617159)
chr2 (25-185)||(43058717-43058877)
chr2 (25-184)||(239736-239896)
chr2 (44-183)||(8972239-8972378)
chr2 (59-185)||(1978528-1978654)
chr2 (68-185)||(28847123-28847240)
chr2 (26-188)||(3025848-3026009)
chr2 (26-182)||(8425358-8425514)
chr2 (45-183)||(15552459-15552596)
chr2 (43-183)||(15551501-15551641)
chr2 (25-183)||(14432525-14432684)
chr2 (9-185)||(28143400-28143575)
chr2 (132-185)||(43216202-43216255)
chr2 (134-187)||(4355753-4355806)
chr2 (132-185)||(42192736-42192789)
chr2 (132-188)||(6949937-6949993)
chr2 (132-188)||(42192237-42192293)
[»] chr8 (32 HSPs)
chr8 (9-185)||(12571863-12572040)
chr8 (9-185)||(19176659-19176835)
chr8 (12-185)||(41681134-41681306)
chr8 (9-185)||(44831614-44831790)
chr8 (9-188)||(13224638-13224816)
chr8 (9-185)||(9930026-9930202)
chr8 (9-182)||(33328161-33328334)
chr8 (9-185)||(31133220-31133396)
chr8 (11-185)||(11656455-11656630)
chr8 (9-193)||(9178005-9178188)
chr8 (25-185)||(13225023-13225184)
chr8 (25-185)||(19176290-19176451)
chr8 (25-182)||(9928912-9929070)
chr8 (25-185)||(33742922-33743082)
chr8 (25-185)||(44831247-44831408)
chr8 (11-138)||(33743290-33743417)
chr8 (25-186)||(41681518-41681680)
chr8 (25-185)||(11656841-11657002)
chr8 (26-184)||(31133605-31133764)
chr8 (9-182)||(4630161-4630328)
chr8 (27-185)||(34540934-34541093)
chr8 (25-182)||(12572235-12572393)
chr8 (25-183)||(33328524-33328683)
chr8 (31-185)||(4629797-4629952)
chr8 (77-185)||(11336959-11337067)
chr8 (47-182)||(10918129-10918264)
chr8 (44-185)||(8073956-8074096)
chr8 (44-103)||(43958267-43958326)
chr8 (10-55)||(18805292-18805337)
chr8 (25-93)||(9177724-9177793)
chr8 (135-187)||(7911112-7911164)
chr8 (145-185)||(10919691-10919731)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-185)||(1667-1841)
scaffold0951 (25-185)||(2051-2212)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-185)||(4576-4752)
scaffold0273 (25-146)||(4242-4364)
[»] scaffold0007 (3 HSPs)
scaffold0007 (9-185)||(64302-64478)
scaffold0007 (70-182)||(64735-64847)
scaffold0007 (9-183)||(205738-205911)
[»] chr4 (62 HSPs)
chr4 (9-185)||(12234329-12234505)
chr4 (9-188)||(11153516-11153695)
chr4 (15-185)||(25447611-25447781)
chr4 (9-183)||(33109686-33109860)
chr4 (9-183)||(46193774-46193948)
chr4 (9-182)||(22434547-22434718)
chr4 (9-198)||(25937657-25937846)
chr4 (9-185)||(15523603-15523779)
chr4 (9-185)||(22170306-22170481)
chr4 (16-183)||(38962195-38962362)
chr4 (9-183)||(4219559-4219733)
chr4 (9-183)||(23494445-23494619)
chr4 (9-185)||(48526196-48526371)
chr4 (9-185)||(51020797-51020973)
chr4 (9-182)||(2118665-2118837)
chr4 (25-188)||(22434176-22434340)
chr4 (9-182)||(54995437-54995609)
chr4 (23-186)||(46193404-46193568)
chr4 (25-186)||(25447246-25447408)
chr4 (9-182)||(45082435-45082606)
chr4 (25-186)||(45082808-45082970)
chr4 (25-185)||(20470895-20471056)
chr4 (26-185)||(15523235-15523395)
chr4 (69-192)||(23494872-23494995)
chr4 (25-182)||(4219943-4220101)
chr4 (25-186)||(12234713-12234875)
chr4 (25-182)||(48526565-48526723)
chr4 (25-182)||(54995072-54995230)
chr4 (9-117)||(12503805-12503913)
chr4 (25-185)||(11153146-11153307)
chr4 (43-184)||(20958264-20958403)
chr4 (26-185)||(25938056-25938216)
chr4 (25-182)||(18751602-18751760)
chr4 (59-185)||(33109883-33110009)
chr4 (25-185)||(51021180-51021340)
chr4 (71-183)||(18763951-18764063)
chr4 (44-184)||(44892552-44892692)
chr4 (25-183)||(2118295-2118454)
chr4 (43-182)||(48713749-48713888)
chr4 (68-188)||(35363028-35363149)
chr4 (44-168)||(43243685-43243808)
chr4 (44-187)||(48294946-48295090)
chr4 (25-167)||(12503454-12503597)
chr4 (44-185)||(48293594-48293735)
chr4 (49-182)||(16690939-16691072)
chr4 (47-168)||(43281198-43281318)
chr4 (44-184)||(44890518-44890658)
chr4 (49-185)||(48708295-48708431)
chr4 (59-185)||(10258306-10258432)
chr4 (49-192)||(16691481-16691623)
chr4 (47-178)||(20957196-20957327)
chr4 (44-127)||(43242328-43242411)
chr4 (9-76)||(18751971-18752038)
chr4 (115-185)||(16318251-16318321)
chr4 (9-185)||(17503974-17504149)
chr4 (9-49)||(17504329-17504369)
chr4 (9-49)||(35193443-35193483)
chr4 (44-124)||(44220781-44220861)
chr4 (87-186)||(55189527-55189626)
chr4 (44-188)||(30597925-30598068)
chr4 (9-42)||(40160236-40160269)
chr4 (132-185)||(55677451-55677504)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-185)||(134042-134218)
[»] scaffold1223 (2 HSPs)
scaffold1223 (9-183)||(755-928)
scaffold1223 (16-188)||(1116-1289)
[»] scaffold0432 (2 HSPs)
scaffold0432 (9-182)||(10242-10414)
scaffold0432 (85-182)||(9935-10032)
[»] scaffold0417 (2 HSPs)
scaffold0417 (9-166)||(10640-10797)
scaffold0417 (25-186)||(11007-11169)
[»] scaffold0027 (2 HSPs)
scaffold0027 (9-185)||(42528-42703)
scaffold0027 (16-182)||(42172-42339)
[»] scaffold0176 (2 HSPs)
scaffold0176 (18-185)||(18835-19001)
scaffold0176 (88-188)||(19069-19169)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-117)||(16564-16672)
scaffold0157 (25-167)||(16880-17023)
[»] scaffold0113 (1 HSPs)
scaffold0113 (59-181)||(28662-28784)
[»] scaffold1585 (1 HSPs)
scaffold1585 (43-184)||(568-709)
[»] scaffold0057 (2 HSPs)
scaffold0057 (44-182)||(61862-62000)
scaffold0057 (111-185)||(61028-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (43-136)||(7691-7784)
[»] scaffold0076 (1 HSPs)
scaffold0076 (84-182)||(8453-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (44-181)||(454-589)


Alignment Details
Target: chr5 (Bit Score: 159; Significance: 9e-85; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 5819298 - 5819476
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 5819476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 2865124 - 2865300
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 2865300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 18183338 - 18183514
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18183514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 19359312 - 19359126
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaacatatat 195  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| | ||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagccatatatatat 19359126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 8647614 - 8647437
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
     |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 8647437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 8461106 - 8460930
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||| |||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagcc 8460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 24362205 - 24362381
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 24362381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 15709146 - 15708971
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcc 15708971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 14215616 - 14215788
Alignment:
Q  13 tagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttt 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||| ||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  113 tgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcc 14215788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 29455111 - 29455287
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcc 29455287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 15372242 - 15372415
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||  |||| || |||||| |||||||||||||| ||||| ||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 164560 - 164736
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| ||||||||| |||||| || ||||||| |||||  |||| | ||||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcc 164736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 5819090 - 5818932
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 14463901 - 14464065
Alignment:
Q  20 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||| || |||||||||||     
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaat-tggggtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  120 ttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| ||  |  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagcc 14464065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 19359520 - 19359681
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgtttt 19359619  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  19359620 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19359681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18183131 - 18182973
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| | |||||| | || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 8647822 - 8647983
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| |  |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 164350 - 164189
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||| |||| ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccaa 164189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 24331929 - 24332107
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg-aaaaatacaac-aaaaatgataattgaatga 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||| | ||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  107 ccgttttgttctgtttt-aaaagggcaggaccagtttcgtgagtaggacaaaacacgagga-ctaaaagtgtaattaag 183  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||| | ||||||| || || | |||||||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||||||||||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaat 179  Q
     ||||||| || |||||||||| ||||| ||||||| | |||| |||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 8461315 - 8461476
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || |||| |||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8461476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 2864915 - 2864751
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||| || || ||||||||||||| |||||||| ||||| ||||||||||||||| ||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagtcaaa 2864751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 16018763 - 16018589
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||| ||||| ||| |||||| ||||||||| ||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| ||||||||||||| || || |||||||| |||| |||||||||| ||| |||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 16018589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 25000471 - 25000634
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    |||||||||||||||||||||||||||||||||  | ||||| || ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||  || ||||| ||||||||||||| ||||||| || ||| |||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcc 25000634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||| |||||||||||||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaat 179  Q
     ||||||| || |||||||||| ||||| ||||||| | |||| |||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 24331722 - 24331559
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaat--gataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| ||||||| |||||||||   |||||||||| |||||||||||||||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcc 24331559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||| |  |||||||||||||||| | |||||||||||||| |||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 25000266 - 25000107
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| || ||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggact 168  Q
     |||| ||||||||||| |||||| |||||  |||||||||||| |||||||||| ||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacgatgact 25000107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 16018969 - 16019129
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||||||||||||||||||||||||  ||| |||| |||| ||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||| ||||||||| ||||||||||| | ||||||| |||||| ||||||||||||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 29454901 - 29454740
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| || |||||||||||||| || |||||||||||||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||| ||||||||||||| |||||||| | ||| ||||||| |||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcc 29454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 7349420 - 7349563
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||| ||||| | ||||||||||||||| |||| ||  |||||||| ||||||||||| ||||||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    |||||||||  |||||||||||||| ||||||||||||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcca 7349563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 15709353 - 15709516
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||||| || |||||  | ||||| || ||||||||||||||| ||||| ||||||||| | || |||||||||||||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
     |||||||| ||| |||||| |||||||| |||||||| | ||| ||||||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagccaaa 15709516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  65 gggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgag 164  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||||||||||| ||||| ||||||||| ||  |||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  165 gactaaaagtgtaattaagc 184  Q
    ||| ||||||||||||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 15372030 - 15371868
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaata-aaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||||| |||||||||||||||| | |||  |  |||| || ||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  15372030 taaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 15371931  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||||||||  |||||||||||  ||||| |||||||  ||||||||||||||| ||||    
T  15371930 aaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaagtcaaa 15371868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 4623286 - 4623147
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| |||||||||||  ||||||| ||||| | | |||||||||||||||| |||  |||||||||||||||||  |||||||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  145 tgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    |||||| | |||||||||| ||| ||||||||||||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaagcca 4623147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 7348685 - 7348558
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaa 158  Q
    |||||||||||||||||||||| | |||||||||||||||  ||| ||  |||||||||||||||||||||||| ||||| ||||||||||||   ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  159 cacgaggactaaaagtgtaattaagcca 186  Q
    || |||||| |||| |||||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagcca 7348558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 4624631 - 4624757
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    ||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||| |||||||||  | || ||||| ||||||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgt 4624730  T
Q  146 gagtaggacaaaacacgaggactaaaa 172  Q
    |||||||  ||||||||||||| ||||    
T  4624731 gagtaggttaaaacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 4219800 - 4219653
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||||| | || |||   ||||||||||||||||| |||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  147 agtaggacaaaacacgaggactaaaagtgtaattaagccaaacatatat 195  Q
    | |||  |||||||||||||  ||||||||||||||||||||| |||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagccaaacttatat 4219653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 6622403 - 6622466
Alignment:
Q  186 aaacatatatgatcacattcaactcaagtttaaagaaaatcaattaaatagagtatcaacttac 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6622403 aaacatatatgatcacattcaactcaagtttaaagaaaatcaattaaatagagtatcaacttac 6622466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 6018452 - 6018315
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    ||||||||||   ||||| | ||||||||| |||| | |||||||||||||||||||| ||   |||||||||||||||||||| || ||||||||||||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaa-gataattttgttctgttttaaaaggacatgaccagtttcgt 6018354  T
Q  146 gagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    |||||| |||||||||||| || |||| |||||||||||    
T  6018353 gagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 6019177 - 6019282
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaa-tacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    ||||||||| |||||||||| |||||||||||||| | ||||||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  146 gagtag 151  Q
    ||||||    
T  6019277 gagtag 6019282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 13814131 - 13814226
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattga-----atgaccgttttgttctgttttaaaagggcagg 134  Q
    ||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||||     ||||| ||||||||||| ||||||||||||||    
T  13814131 tgcgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaaagacatgacagttttgttctgatttaaaagggcagg 13814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 14462730 - 14462683
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatga 106  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatga 14462683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg 68  Q
    |||||||||| || ||||||||||||||||||||||   || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 27307428 - 27307511
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaa 92  Q
    |||||||||||| | ||||||| |||||||||||||| ||| |||||   ||||| || |||||||| |||| ||||| |||||    
T  27307428 agcatagggggtggatctaaaaatgtcatttctctgcatttctggagttgaaaataggaggtaggactaaaactacaaaaaaaa 27307511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 41834443 - 41834605
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaa-atgataattgaatgaccgttttgttctgtt 121  Q
    |||||||||||||||||||||||||||   |||   ||||| || |||||||| |||| | ||| |||| |||||| || |  ||| |||||||||  |     
T  41834443 gtctaaaactgtcatttctctgcgtttcaagagttgaaaataggaggtaggactaaaactgcaaaaaaacatgatagtttag-gacggttttgttcgatc 41834541  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    | |||  |||||||||| |||||||||  || |||||  ||||||| |||||||||||||||||    
T  41834542 tgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 41834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 32305991 - 32305947
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||| ||||| |||||||||||||||||||||| |||| |||||    
T  32305991 catagcgggtaagtctaaaactgtcatttctctgtgtttctggag 32305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 50970647 - 50970823
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 50970823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 18984295 - 18984119
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 18984119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 5540194 - 5540363
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5540363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 29869796 - 29869620
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 29869620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 8678911 - 8679089
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
     |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaa 8679089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 33144288 - 33144467
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagtcaaa 33144467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 29307122 - 29306952
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcca 29306952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 15646571 - 15646740
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15646740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 21856412 - 21856590
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| ||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 21856590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 9019149 - 9018973
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9018973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 17433392 - 17433213
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||||||||||||||||| |  ||||||| |||||||| ||||||| |||||| ||||||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagccaaa 17433213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 29307317 - 29307488
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcca 29307488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 26859431 - 26859604
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     ||||||||||||||||||||||||  ||||||||||||||  |||||||||||||  |||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagcc 26859604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 39154195 - 39154021
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | ||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||| || |||||||||||||| | ||||||| || ||| |||||||||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 5539977 - 5539817
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 5539878  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  5539877 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 9019338 - 9019508
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||| |||||||||||||| |||||||||||||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||||||||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||| ||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 9019508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 29870003 - 29870167
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |  ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaa 29870167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 21856203 - 21856044
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 27 - 185
Target Start/End: Complemental strand, 50970437 - 50970278
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| |  ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  126 aagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 50970278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 8678702 - 8678542
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||| ||||||| || ||  | ||||| |  ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 8678603  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  8678602 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 4636356 - 4636515
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 15173478 - 15173638
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 18984503 - 18984664
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| |||||||||| |||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984602  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||    
T  18984603 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 18984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 33144078 - 33143925
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || |||||||||||| || ||| |||||||||||||||| |||||||||||||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgta 177  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 39154404 - 39154565
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgtttt 39154503  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  39154504 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 52268430 - 52268290
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| | |||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  145 tgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| ||| ||||| |||||||| |||||||||||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagcc 52268290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 26859176 - 26859050
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggac 167  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  168 taaaagtgtaattaagccaaacatata 194  Q
     |||||||||||||||||||| |||||    
T  26859076 caaaagtgtaattaagccaaaaatata 26859050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 15646353 - 15646192
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| |||||  | |||||  | ||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgtttt 15646254  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  15646253 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 15646192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||||||||||||| ||||| |||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  111 tttgttctgttttaa 125  Q
    |||||||||||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 5962739 - 5962579
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||| ||||| |||| |||||  | ||||| || ||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgtttt 5962640  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    |||||||| ||||||||||||||| |||  || ||||||||||| |||| |||||||||||    
T  5962639 aaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  69 gtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggact 168  Q
    |||||||||||| | ||||||||||||||| ||||||||  |||||||||||||||||||||||| |||  |||| |||||| | ||||||||||||||     
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  169 aaaagtgtaattaag 183  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 2733416 - 2733502
Alignment:
Q  99 ttgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| || |||| |||||||| ||||| |||||| ||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcc 2733502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 17112442 - 17112281
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||| ||||||||| |||||  | ||||| || ||||||||||||||| ||| |||||||||||||||| |||  |||| |||| ||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||   |||| |||| |||||||  ||||||| ||| || ||||||||||||||||||    
T  17112342 aaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcca 17112281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 47827026 - 47827108
Alignment:
Q  78 aaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaaca 160  Q
    |||||| |||||||||||||||| || |||  ||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  47827026 aaaatataacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaaca 47827108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||| | ||||||||||||| ||||| ||||||||||||  |||||||||||||| |||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 50419726 - 50419806
Alignment:
Q  105 gaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||  |||||||| |||||||||| |||||||||| || | |||  ||| ||| ||||||| |||||||||    
T  50419726 gaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagcc 50419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 17088326 - 17088290
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgc 45  Q
    |||||||| |||||||||||||||| |||||||||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgc 17088290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 39485240 - 39485200
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||| |||||||||||||||||||||| |||||| ||||    
T  39485240 agcatatggggtaggtctaaaactgtcatctctctgtgttt 39485200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 6e-83; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 10900299 - 10900478
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccaaa 10900478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 20741276 - 20741100
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20741100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 11276951 - 11277130
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccaaa 11277130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 18257313 - 18257137
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 18257137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 15828010 - 15828186
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15828186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 28472812 - 28472637
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     |||||||||||||||||| |||||||||| |||||||||| || |||||||||||||| |||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 28472637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 29860001 - 29859826
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     |||||||||||||||||| |||||||||| |||||||||| || |||||||||||||| |||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 29859826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 31470685 - 31470860
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||| ||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 1149802 - 1149980
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttt-tggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccg 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagccaaa 1149980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 12935528 - 12935702
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||| || |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagcc 12935702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 11445163 - 11444987
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11444987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 2319832 - 2319663
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaacatata 194  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||||||| || |||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctaatatata 2319663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 12935318 - 12935147
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaacatatat 195  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaacatatat 12935147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    |||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||| |||||| |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||  |||||||||| ||| ||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 23074164 - 23073999
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||           |||||||||| ||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaat-----------gataattgaaggacc 23074076  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 23073999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 11445371 - 11445532
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11445532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 22219737 - 22219898
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 22219898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 23075512 - 23075673
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| |||||||||  ||||| | || ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 23075673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 4811535 - 4811370
Alignment:
Q  22 ggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||| |||| ||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    ||||||||||| ||||||||||||||||||  ||||| ||  |||| |||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagccaa 4811370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 31470476 - 31470315
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 31470315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 11276760 - 11276590
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||||| || |||||||||||||||  ||||||||||| ||||||| |||| |||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||| |||| ||||||| |||||||  ||||||||| |||||||| |||||||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcc 11276590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 18257565 - 18257684
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggac 167  Q
    |||||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  168 taaaagtgtaattaagccaa 187  Q
     |||||| ||||||||||||    
T  18257665 caaaagtataattaagccaa 18257684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18505080 - 18504922
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || |||||||||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgtttt 18504981  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  18504980 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 20741485 - 20741649
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaa---atgataattgaatgaccgttttgttctgt 120  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||| ||||   |||||||||||| ||||||||||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  121 tttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcc 20741649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 29033577 - 29033436
Alignment:
Q  43 tgcgtttttggag-aataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtt 141  Q
    ||||||||||||| || |||||||||||||||| ||||  | ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  142 tcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||| ||| ||||| |||||||| |||||||||||||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 3835135 - 3835268
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||||||||||||||||||||| | ||||||||||||||| || |||  |||||||||||||||||  |||||||||| |||||||||    
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgag 3835234  T
Q  149 taggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||| ||||||||  |||| ||||||||||||||    
T  3835235 taggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 18296285 - 18296145
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||||  | || |||     
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| | ||||||||||||||||||| | ||||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaagcc 18296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 15827794 - 15827639
Alignment:
Q  32 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt--tttgttctgttttaaaag 128  Q
    |||||||| ||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||| ||||| ||||||  |||||| |||||||||||    
T  15827794 tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaag 15827695  T
Q  129 ggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    | ||| |||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  15827694 gacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 29035040 - 29035180
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | ||||||| |||| ||||||||||| ||||||||||||||| | || |||  |||||||||||||||||||||||  |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||||||  ||||||||||||| |||||||||||||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 1149553 - 1149465
Alignment:
Q  97 aattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 1149465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 4811675 - 4811802
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaa 158  Q
    ||||| || |||| || ||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||| || ||||||| |||||||| |||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  159 cacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||  |||||| |||||||||||    
T  4811775 cacgaggatcaaaagtataattaagcca 4811802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 22534214 - 22534273
Alignment:
Q  129 ggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||| |||||||||| || ||||| |||||||| ||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagccaaa 22534273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 35163557 - 35163627
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaa 80  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||   ||||| || |||||||| ||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaa 35163627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 32836367 - 32836545
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| ||||||||||||||||||| |||||||| ||||| || ||   ||||| |  |||||||| |||| | ||| ||| || | | || ||  ||     
T  32836367 agcataaggggtaggtctaaaactgttatttctcttcgtttctgaagttgaaaatagaaggtaggactaaaactgcaaaaaacat-acagtttaagaacg 32836465  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||  ||| |||  |||| ||||| |||||||||  || |||||  | ||||||||||||||||||||||||||    
T  32836466 gttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagccaaa 32836545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 6e-83; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 39555946 - 39556125
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaa 39556125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 31779021 - 31779197
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 31779197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 5137156 - 5136983
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| ||||| |||||||||| || |||||||||||||| ||||||||||||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| |||||||||||| | |||| |||||||||||||| ||||||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 20840734 - 20840560
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20840560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 24300925 - 24301101
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 24301101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 37727105 - 37726929
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||||||||| ||||||||||| || ||  |||||||||||||| |||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcc 37726929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 23644638 - 23644462
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 23644462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 43973610 - 43973441
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||  | || |||||||||||||||||||||||||||| |||||||||||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
     |||||||||||||||||| | || ||||||||||||||||||  |||||||||||||  |||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 32535330 - 32535511
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaat-----gataattgaatg 105  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||     |||||||||| |    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  106 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaa 32535511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 26837725 - 26837900
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| |||| ||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 26837900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 30104657 - 30104482
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||| | || ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 30104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 48453144 - 48452989
Alignment:
Q  30 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |    
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  130 gcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcc 48452989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 27393946 - 27394122
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||||||| || |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 27394122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaatta 181  Q
    |||||||||||||||| ||||||| |||||| |||||||||||| | |||||||||||| |||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 26274936 - 26275108
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||||||| ||| | |||| | |||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 43973824 - 43973985
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 43973985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 17464860 - 17465037
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaa-tacaacaaaaatgataattgaatgac 107  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| |||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  108 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||| |||||||||||   |||||||||| || ||||| |||||||||||||| |||| ||||||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcc 17465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 37727314 - 37727478
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagccaaa 37727478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 27393822 - 27393661
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 27393661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 20840945 - 20841106
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcc 20841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 39555739 - 39555578
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39555578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 29801798 - 29801961
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    |||||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||  |||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcc 29801961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||| ||||||||||||||||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 4275748 - 4275909
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 4275909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 31778814 - 31778653
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 31778653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 25853395 - 25853233
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 25853233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 17464652 - 17464491
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||| | ||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 17464553  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||| || |||| |||||||||||||| |||||||||||||||||    
T  17464552 aaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcc 17464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 23644849 - 23645010
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||  | |||  | ||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||| |||||| ||||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 30098147 - 30098308
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||| ||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 30098246  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  30098247 aaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 30098308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 5137365 - 5137526
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||| |||||| |||||||||||||||||||| |||| ||||||||| ||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| ||||||||| |||||||| |||||||||||||| |||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5137526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 50116812 - 50116955
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    |||||||| | |||||||||||||  ||||||||||||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcca 50116955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 22424975 - 22424805
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaacatata 194  Q
    |||||| ||| ||||||||||| ||||||   ||||||||| || ||||||||||||||||| || |||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcctaaaatata 22424805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 32535120 - 32534962
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| | || | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 32535021  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||| |||||||||| ||||||||||| | |||||||||||||| ||||||||||||||    
T  32535020 aaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26837521 - 26837363
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||| |||| |||||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 29801477 - 29801355
Alignment:
Q  64 ggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacga 163  Q
    |||||||| |||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  164 ggactaaaagtgtaattaagcca 186  Q
     ||| ||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaagcca 29801355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26274728 - 26274570
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||  |||||||| |||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||||||  ||||| || ||||  |||| |||||||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 23228414 - 23228554
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 145  Q
    |||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||| |||  |||||||| |||||||||||||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgt 23228512  T
Q  146 gagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    ||||||| ||||||||| |||| |||||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagccaa 23228554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||| ||||||||| | ||||||||||||||||||||  |||||||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||| ||||||||||||||||| || | |||||||||| ||| |||| |||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 41047083 - 41047239
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| ||| ||||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggac-gttttattctgtttt 41047181  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||| ||| |||||||||||||||||| ||||||| || |||  |||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaagac-gaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 32697106 - 32697244
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||  ||| | |||||    
T  32697106 cgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  145 tgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||  ||||||||||||| |||| | |||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 51474737 - 51474879
Alignment:
Q  44 gcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    |||||||||||| |||||| | |||||||||||||||||| ||||||||||||||| | || |||  ||||||| ||||||||||||||| ||||| |||    
T  51474737 gcgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaattt 51474836  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| | ||||||||| | || |||||||||||||||||    
T  51474837 cgtgagtatgccaaaacacgggaaccaaaagtgtaattaagcc 51474879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 37220698 - 37220557
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||||||||||||| |||| |||  |||| |||||||||||||| ||| || |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||| |||||||| |||||||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 37220557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 25420542 - 25420684
Alignment:
Q  41 tctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagt 140  Q
    ||||| |||||| || ||||||||||||||| |||||||||| |||||||||| ||||||||| |||  |||| |||| ||||||||||||  || || |    
T  25420542 tctgcatttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaat 25420641  T
Q  141 ttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||||||| ||||| |||| ||  |||||||||||||||    
T  25420642 ttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 185
Target Start/End: Complemental strand, 45966076 - 45965938
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| | |||||||||| ||| ||||||||| ||||| |||||||||| ||| |||  ||||||| ||||||||||| ||||||  |  ||||||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtg 45965977  T
Q  147 agtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| | |||||||||||||| |||||||||||||||||    
T  45965976 agtatgccaaaacacgaggaccaaaagtgtaattaagcc 45965938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  71 aggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaa 170  Q
    ||||| |||| | |||||||||||||||  ||| |||  ||||||||||||||||||||||||||||| |||||||| |||  |||||||||||||| ||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  171 aagtgtaattaagc 184  Q
    ||||||||||||||    
T  51473442 aagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 18010162 - 18010256
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtag 151  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||| | |||| ||||||||||||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtag 18010256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 37222040 - 37222116
Alignment:
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcc 37222116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 55192293 - 55192113
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| || ||| || |  |||     
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaactacaaaaaacat-atagtttatggacg 55192195  T
Q  109 gttttgttctgttttaaaag-ggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaaca 190  Q
    |||||||| || ||| |||| |||  ||||| |||||||||  || |||||  || |||||||||||||||||||||||||||    
T  55192194 gttttgtt-tgatttgaaagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagccaaaca 55192113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 25419285 - 25419145
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaa-tgataattgaatg-accgttttgttctgttttaaaagggcaggaccagtt 141  Q
    ||||||||||||  |||||||||||  ||||| |||| | ||| ||||| ||||||||||| | || ||||||||||||||||||||||||| || | ||    
T  25419285 gcgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatt 25419188  T
Q  142 tcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||| |  ||||||||| ||| |||||| |||| ||||    
T  25419187 tcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 49407972 - 49407925
Alignment:
Q  8 tagcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggag 49407925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggg 69  Q
    |||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 23227398 - 23227319
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttt 122  Q
    ||||||||||||| ||||||||||| | |||||||||||| |||||||||||| ||||| | |||   ||||||||||||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgttt 23227319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 37075864 - 37075818
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggag 37075818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 27200062 - 27200237
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||   ||||| || |||| ||| |||| | ||| ||| |||||| ||  | |||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    || ||||||  ||| |||  ||||| |||| |||||||||  || |||||  | ||||| |||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 27200237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 33412383 - 33412417
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||| ||||||||||||||||    
T  33412383 gggggtaggtctaaaactatcatttctctgcgttt 33412417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 52375824 - 52375877
Alignment:
Q  132 aggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| |||||||||| || |||||  ||||||| |||||||||||||||||    
T  52375824 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 52375877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 22370671 - 22370599
Alignment:
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||  |||| |||| || ||||||| |||||||||| || |||||  ||||||| ||||||||||||||    
T  22370671 ttttgtttggtttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 27199878 - 27199838
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||  |||| |||||||||    
T  27199878 agcatagggggtaggtctaaaactgatatttatctgcgttt 27199838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 32695830 - 32695706
Alignment:
Q  58 taaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaa 157  Q
    ||||||| |||  ||||| |||| | |||||||||| ||||| | | |||  |||||||||||||||||| | ||  | || |||||| |||||| ||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  158 acacgaggactaaaagtgtaattaa 182  Q
    | | |||||| |||| |||||||||    
T  32695730 atatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 49407872 - 49407796
Alignment:
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| ||| |||  |||| ||||| |||||||||  || |||||  ||||||| |||||||||||||||||    
T  49407872 gttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 49407796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 9e-82; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 19830596 - 19830423
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19830423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 19590701 - 19590525
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 37786943 - 37786767
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 37786767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 38858819 - 38858643
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| |||||||| ||||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 38858643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 2659211 - 2659385
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||| |||||||||| ||| |||| |||||| ||||||| |||| ||||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcc 2659385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||| ||||||||||||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 32004985 - 32005162
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || ||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||| ||||||||||||| ||||||||||||||||| | ||||||| |||||| ||||||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagccaaa 32005162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 35289272 - 35289446
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 35289446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||| ||||| ||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 34534162 - 34534336
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||| || |||||| ||||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagcc 34534336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaat 179  Q
    |||||||| ||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 19590909 - 19591070
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcc 19591070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 4478076 - 4478242
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||||||| |||  | || |    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 2659000 - 2658839
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| |||||||||||||||||||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||| ||||||||| ||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcc 2658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 38859025 - 38859186
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 38859186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 34533952 - 34533791
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| ||||||||||||||||||||||||  | ||||| || ||||||||| ||||| ||||||||||||||||||||||||| |||| |||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 34533791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 32004774 - 32004614
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||||||| |||||  | ||||| || |||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||| || ||||||||||||| |||||||||||||| |||||||||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32004614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 37787153 - 37787312
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||  |||||||||||||| |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  126 aagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 37787312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 35289063 - 35288900
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    ||||||||||||||||||| |||| |||||  | |||||  |  |||||||||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 35288964  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||    
T  35288963 aaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagccaaa 35288900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 28584326 - 28584466
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| || ||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    |||| |||| |||| ||||||||| ||||||||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 38161093 - 38160951
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||| |||  ||||||||||||||||||||||||||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||| |||||| ||||||| |||||||||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaagcc 38160951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 19830804 - 19830964
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||| |||||| ||||||||||||||||||||  ||||||||||| ||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||| |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19830964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 29100011 - 29099863
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||| ||| ||||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaa 172  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 23952892 - 23952730
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| ||| |  | ||||| |  ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  23952892 ctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 23952793  T
Q  124 aaaagggcaggaccagtttcgtgagta-ggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||||||    
T  23952792 aaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagcc 23952730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 47 - 185
Target Start/End: Complemental strand, 28583577 - 28583439
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||| || |||||||||||||||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  147 agtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagcc 28583439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| ||  ||||||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||| ||||||||||   ||||||||| |||||||||||||| ||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgttttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 35579074 - 35579028
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggag 35579028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 35579256 - 35579298
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttttt 51  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgttttt 35579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26026688 - 26026734
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggag 26026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 48247767 - 48247721
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggag 48247721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 39137014 - 39137079
Alignment:
Q  121 tttaaaag-ggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||| |||||||||  || ||||| |||||||  |||||||||||||||||    
T  39137014 tttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcc 39137079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 27245256 - 27245200
Alignment:
Q  132 aggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||| |||||||||| || |||||  | ||||| ||||||||||||||||||||    
T  27245256 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaa 27245200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 153; Significance: 4e-81; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 4969 - 4793
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 4793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 5179 - 5334
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||    |||||||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaatagg----aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgtttt 5274  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||| || |||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  5275 aaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 11090695 - 11090524
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 239528 - 239353
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcc 239353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 40027316 - 40027140
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcc 40027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 40815714 - 40815887
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 18451200 - 18451376
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18451376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 22374496 - 22374320
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 22374320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 43058509 - 43058332
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||  ||||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcca 43058332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 1978284 - 1978108
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||||| ||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagcc 1978108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 28616788 - 28616610
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccg 109  Q
    |||||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaa 28616610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 26538273 - 26538097
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    | ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 26538097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  112 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||| | ||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 3025641 - 3025472
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||| ||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaat 179  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 26538454 - 26538624
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| ||| |  | |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 26538624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||| ||||||||||||||||||| ||||||||||||  |||||||| || || ||||||||||||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 7446519 - 7446342
Alignment:
Q  11 catagggggtaggtctaaaa----ctgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatga 106  Q
    ||||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  107 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||  |||||||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcc 7446342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 7446730 - 7446891
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||||||||||||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||| | |||||||||||||  |||| ||||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcc 7446891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 20444890 - 20444749
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||| || |||||||||||||| |||||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 20444749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 18450991 - 18450830
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18450830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 40815506 - 40815342
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagacaaa 40815342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 40027524 - 40027682
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| |||||| |||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 40027623  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  40027624 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 11090904 - 11091065
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||| ||||||||| |||||  | ||||| || | |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11091065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 20440436 - 20440576
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||| |||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20440436 gcgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 20440534  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||| || |||||||||||||| |||||||||||||||||    
T  20440535 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 20440576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 22374709 - 22374870
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 22374870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 35779849 - 35779706
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |||  |||||||||||||||||| |||||||||| ||||    
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    ||||||| | |||||||||||||| |||||||||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccaa 35779706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 35781067 - 35781207
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||| ||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||||  ||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 28616998 - 28617159
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28617159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 43058717 - 43058877
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 43058877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||  |||||||||||||||||||| |||| ||||||||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 8972378 - 8972239
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||||| ||||| ||||    
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||| | | |||||||||||||| |||||||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 1978528 - 1978654
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaa 158  Q
    ||||| || |||||||| |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  159 cacgaggactaaaagtgtaattaagcc 185  Q
    ||| ||||| |||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagcc 1978654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 28847123 - 28847240
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggac 167  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  168 taaaagtgtaattaagcc 185  Q
     |||| ||||||||||||    
T  28847223 caaaaatgtaattaagcc 28847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 3025848 - 3026009
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||| |||| ||||||||||| | |||||||||||||| |||| |||||||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagccaaa 3026009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-gaccgttttgttctgtttta 8425416  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||| || | ||||| ||||||||||||| |||||||| ||||| ||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 15552459 - 15552596
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 144  Q
    |||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| || |||||    
T  15552459 cgtttttggagggcaaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcg 15552557  T
Q  145 tgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||| |||||||  | ||| |||||||||||||||    
T  15552558 tgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 15551641 - 15551501
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||| |||| |||  ||||||| |||||||||| |||| ||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||||   |||||||||||||| |||||||||||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| ||||||| |||||||||| |||||||||  ||| |||| |||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||| |||| |||||||||| |||||||| |||||||||||||| |||| ||||||||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 28143400 - 28143575
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| ||  ||||||| |||| | ||| ||| |||||| || |  |||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     ||||||||  ||| |||  |||||||||| |||||||||  || |||||  ||||||| ||||||| |||||||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcc 28143575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 43216202 - 43216255
Alignment:
Q  132 aggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| |||||||||| || |||||| | |||||||||||||||||||||||    
T  43216202 aggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcc 43216255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 4355806 - 4355753
Alignment:
Q  134 gaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    ||||| ||||||||||||| |||||  | ||||| |||||||||||||||||||    
T  4355806 gaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagccaa 4355753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 42192736 - 42192789
Alignment:
Q  132 aggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| |||||||||| || |||||  ||||||| |||||||||||||||||    
T  42192736 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 42192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 6949937 - 6949993
Alignment:
Q  132 aggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||| |||||||||| || |||||  | ||||| ||||||||||||||||||||    
T  6949937 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaa 6949993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 42192293 - 42192237
Alignment:
Q  132 aggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||| |||||||||| || |||||   |||||| ||||||||||||||||||||    
T  42192293 aggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaaa 42192237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 12572040 - 12571863
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggt-aggacgaaaaatacaacaaaaatgataattgaatgac 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  108 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 12571863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 19176659 - 19176835
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19176835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 41681306 - 41681134
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgtt 111  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  112 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 41681134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 44831614 - 44831790
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| |||||||| ||||||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 44831790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 13224816 - 13224638
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattatgccaaa 13224638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 9930026 - 9930202
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 9930202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||| ||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 31133396 - 31133220
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcc 31133220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 11656630 - 11656455
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccg 109  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  110 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11656455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 9178005 - 9178188
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| || || ||||||| |||||||||||||| ||||| ||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaacatat 193  Q
    ||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaatat 9178188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 13225023 - 13225184
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 13225184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 19176451 - 19176290
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19176290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 9929070 - 9928912
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||  || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 9928971  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  9928970 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 33743082 - 33742922
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 33742922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 44831408 - 44831247
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 44831247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 33743290 - 33743417
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  111 tttgttctgttttaaaagggcaggacca 138  Q
    ||||||||||||||||| ||||| ||||    
T  33743390 tttgttctgttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 41681518 - 41681680
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||  ||||||||||||||| |||||  | ||||| |  ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41681617  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  41681618 aaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcca 41681680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 11656841 - 11657002
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11657002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 31133605 - 31133764
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||| ||||||||||||| ||| |||||  | ||||| || |||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||      ||||||||| ||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||| | |||||||||||||  ||||||||| ||||||||||||  |||||||||| ||  ||||||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 34540934 - 34541093
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaa 125  Q
    |||||| |||||||||||||||| |  ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  126 aagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 34541093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 12572235 - 12572393
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12572334  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||| ||| ||| ||||||||||||||  |||||||||||||| ||||||||||||||    
T  12572335 aaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||||||||||||| |||||  | |||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||| ||| ||| |||||||||||||||  ||||||||||||| |||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 185
Target Start/End: Complemental strand, 4629952 - 4629797
Alignment:
Q  31 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 129  Q
    ||||||||||| ||||||| |||||  | ||||| || |||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  130 gcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||| || | ||||||||||| | |||||||| |||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagcc 4629797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 11336959 - 11337067
Alignment:
Q  77 aaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgt 176  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||| | |||||||||| ||| ||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  177 aattaagcc 185  Q
    |||||||||    
T  11337059 aattaagcc 11337067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 10918264 - 10918129
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| ||||||||||||||| || ||||||| |||||||||||||| ||||| |||  ||||| ||||||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  147 agtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||  |||||||||||||| |||| |||||||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaa 10918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 8073956 - 8074096
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    ||||||||||||  ||||||||||| |  |||| ||||| |||||||| ||||||||||| ||   |||||||||||||||||||| || || || ||||    
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| |||| |||||||||||||| |||||| ||| ||||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaagcc 8074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 43958326 - 43958267
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaa 103  Q
    |||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaa 43958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 18805337 - 18805292
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggag 18805292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 9177793 - 9177724
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaat 93  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||| ||||||| ||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 7911112 - 7911164
Alignment:
Q  135 accagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    |||| |||||||||| || |||||  |||||| ||||||||||||||||||||    
T  7911112 accattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagccaa 7911164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 10919691 - 10919731
Alignment:
Q  145 tgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||||||| |||||| ||||||||||    
T  10919691 tgagtaggtcaaaacacgaggaccaaaagtataattaagcc 10919731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 1841 - 1667
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcc 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 2051 - 2212
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 4576 - 4752
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagcc 4752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||||| |||  | ||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  124 aaaagggcaggaccagtttcgtg 146  Q
    |||||||||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 64478 - 64302
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||| |||||||||||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 64302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  70 taggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggacta 169  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  170 aaagtgtaattaa 182  Q
    |||||||||||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 205738 - 205911
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||  ||||||| |||| | ||| ||| |||||| || |  |||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||||  ||| |||  |||||||||| |||||||||| || |||||   ||||||||||||||||||||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 12234505 - 12234329
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||| |||||| |||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcc 12234329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 11153516 - 11153695
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| || |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaa 11153695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 25447611 - 25447781
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagcc 25447781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| |||| ||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 22434547 - 22434718
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  22434646 gttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 25937846 - 25937657
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||||| ||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaacatatatgat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| || ||| |||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcctaaaataaatgat 25937657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 15523603 - 15523779
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
     ||||||| ||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcc 15523779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 22170306 - 22170481
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||| ||||||| || |||||| |||||| |||||||||||||| |||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 22170481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 38962195 - 38962362
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  116 tctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||||||||||| ||||||||||||||| |||  |||||||||||||| |||| ||||||||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||| | |||||||| |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    | |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 48526371 - 48526196
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||||||| || |||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcc 48526196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 51020973 - 51020797
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||||||||| |||| |  | ||||||| |||||  |||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcc 51020797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||| ||||||||||||  |||||||||||| |||| ||| |||||||||| ||| ||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 22434340 - 22434176
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccaaa 22434176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 54995437 - 54995609
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||| ||||| ||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 46193568 - 46193404
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtt 121  Q
    ||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 46193404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 25447408 - 25447246
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 25447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 45082606 - 45082435
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||| |||||||||||||  ||||| |||||||||||  |||||||||| ||| ||||| ||||||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 45082808 - 45082970
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||| ||||||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcca 45082970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 20470895 - 20471056
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| | |||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20471056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 15523395 - 15523235
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 23494872 - 23494995
Alignment:
Q  69 gtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggact 168  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  169 aaaagtgtaattaagccaaacata 192  Q
    ||||||||||||||||| ||||||    
T  23494972 aaaagtgtaattaagcctaacata 23494995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4219943 - 4220101
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| ||||||||||||||||| ||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 12234713 - 12234875
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||| ||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12234812  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||| || |||||||||||||||| |||||||||||||| |||||| |||||||||||    
T  12234813 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcca 12234875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 48526565 - 48526723
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||| ||||||||||||||||||  |||||||||||||| |||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 54995230 - 54995072
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 54995131  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||| ||||| ||||||||||||||| ||| |||||||||| ||||||||||||||    
T  54995130 aaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  109 gttttgttc 117  Q
    |||||||||    
T  12503905 gttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 11153307 - 11153146
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| || ||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| ||||| ||| ||||||||| |||||||||||||| |||||| ||||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 11153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 20958264 - 20958403
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||| |||   |||||||||||||||||||||||||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 25938056 - 25938216
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||| ||||||| || |||| |||||  | ||||| || |||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttta 25938155  T
Q  125 aaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||    
T  25938156 aaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 25938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18751760 - 18751602
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    ||||||||| ||||| ||||||||| |||||  | ||||| || ||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||| |||||||||  |||||||| |||||||||||||| ||||||||||||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 33109883 - 33110009
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaa 158  Q
    ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  159 cacgaggactaaaagtgtaattaagcc 185  Q
    || |||||| |||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagcc 33110009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 51021180 - 51021340
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||| || ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||| |||||||| || |||||||||||| ||||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgtttt 51021278  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||    
T  51021279 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 51021340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  71 aggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaa 170  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  171 aagtgtaattaag 183  Q
    |||||||||||||    
T  18764051 aagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 44892552 - 44892692
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||||||  ||||||||| ||| ||||||||||||||||||| ||||| |||| ||||    
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||||| |||| | |||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 2118454 - 2118295
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| || ||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||  ||||||| ||||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgtttt 2118355  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||    
T  2118354 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 48713749 - 48713888
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    | ||||||||  |||||||||| | |||||||||||||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaa 48713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 35363028 - 35363149
Alignment:
Q  68 ggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt-aaaagggcaggaccagtttcgtgagtaggacaaaacacgagga 166  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||| ||||| |||| |||||||||||||||||| |||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  167 ctaaaagtgtaattaagccaaa 188  Q
      ||||||||||||||||||||    
T  35363128 tcaaaagtgtaattaagccaaa 35363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 43243685 - 43243808
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||||    
T  43243685 gcgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  144 gtgagtaggacaaaacacgaggact 168  Q
    ||||||||| |||||||||||||||    
T  43243784 gtgagtaggccaaaacacgaggact 43243808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 48294946 - 48295090
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacg-aaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    |||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||| |||||||||  |||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    |||||||||  |||||||||| ||| |||| ||||||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagccaa 48295090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 167
Target Start/End: Complemental strand, 12503597 - 12503454
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggac 167  Q
    |||| ||| ||| |||||||||||||| | ||||||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggac 12503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 48293735 - 48293594
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||  ||  ||||||| |||||||||  | ||||| || ||||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| | |||||||||||||| |||||||||||||||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 48293594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 16691072 - 16690939
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||   ||||||| |||||||||  |||||||||| |||||||||    
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgag 16690973  T
Q  149 taggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||  |||||||| ||||| |||| |||||||||    
T  16690972 tagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 168
Target Start/End: Original strand, 43281198 - 43281318
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||||  ||  |||||||||||||||||| |||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  147 agtaggacaaaacacgaggact 168  Q
    |||||| |||||||||||||||    
T  43281297 agtaggccaaaacacgaggact 43281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 44890658 - 44890518
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| ||||||||||||||| || ||||||| |||||||||  |||||| || ||   ||||||||||||||||||||||| ||||| ||||    
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    |||| |||| |||||||| ||||| |||| |||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 48708431 - 48708295
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||| | |||||||  | |||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||| || |||||||      
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggt 48708332  T
Q  149 taggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||| ||||||||  |||| |||||||||||||||||    
T  48708331 taggccaaaacacatggaccaaaagtgtaattaagcc 48708295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 10258306 - 10258432
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaa 158  Q
    ||||| ||||||| ||| |||| | ||||||||||||||||||||  ||  ||||  ||||||||||||||||||||||| |||| |||||||| || ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  159 cacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||| |||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagcc 10258432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 16691481 - 16691623
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||||| |||| |||||||||| |||||||||| |||||| || |||  ||||||| ||||| || ||| |||||||| |||||||||    
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatgtttaaagagg-caggaccattttcgtgag 16691579  T
Q  149 taggacaaaacacgaggactaaaagtgtaattaagccaaacata 192  Q
    |||| ||||||||  |||  ||||||||||||||||||| ||||    
T  16691580 taggtcaaaacacagggatcaaaagtgtaattaagccaatcata 16691623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||||||||||||||| ||| |||||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||| | | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  147 agtaggacaaaacacgaggactaaaagtgtaa 178  Q
    |||| | |||||| ||||||| |||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 43242411 - 43242328
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaa 127  Q
    |||||||||||  ||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg 76  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 16318251 - 16318321
Alignment:
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 16318321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 17504149 - 17503974
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| || |||||||| |||| | ||| ||| |||||| ||  | |||     
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacg 17504051  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||| |||||  ||| |||  |||||||||| |||||||||  || |||||  ||||||| || ||| ||||||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagcc 17503974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 44220781 - 44220861
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttta 124  Q
    |||||||||||| |||||||  ||||||| |||||||||  |||||||||||||| |||| |||  |||||||||||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 55189626 - 55189527
Alignment:
Q  87 caaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    ||||||||||||||||| |||  ||||||||| |||||||||||||  |||| |||  ||| |||| |||||||||||||  |||| | |||||||||||    
T  55189626 caaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatataattaagcca 55189527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 30597925 - 30598068
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaaggg-caggaccagttt 142  Q
    |||||||||||   |||||| |||| |||||| |||| | |||||||||| |||||| |  |||  |||||||| | |||||||| | ||| |||| ||     
T  30597925 gcgtttttggatgttaaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttc-gatttaaaagagacagaaccaattc 30598022  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    ||||||| || |||||||||||||| ||||||||||| ||||||||    
T  30598023 cgtgagttggtcaaaacacgaggaccaaaagtgtaatcaagccaaa 30598068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctc 42  Q
    ||||||||||||||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 55677451 - 55677504
Alignment:
Q  132 aggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||| |||||||||| || ||||| || ||||| |||||||||||||||||    
T  55677451 aggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcc 55677504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 134042 - 134218
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 134218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 1116 - 1289
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    ||||| |||||||||||| ||||| ||||||||| ||| |  | ||||| || |||||||||||| || |||||||||||||||||||| ||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttg 1215  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaaa 188  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  1216 ttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagccaaa 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||||| |  |||||||||||||||||  |||||||||||||| ||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 10032 - 9935
Alignment:
Q  85 aacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||| ||||||||||| |||| ||||||||| | ||||||||||| || ||||||||||| ||||  ||||||||||||| |||| |||||||||    
T  10032 aacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 10797 - 10640
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||||| ||||| ||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgagga 166  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 11007 - 11169
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||  |||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 11106  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcca 186  Q
    |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  11107 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcca 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 42528 - 42703
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||| ||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  109 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||| | ||||||| |||||||  |||||||||||| | |||||| ||||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcc 42703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 42339 - 42172
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| || ||  | ||||| || |||| ||| |||||| |||||||||||||||||||||||||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  115 ttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||||||| ||||||| ||||||||||| |||  ||||||||||| |||||||||||||||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 19001 - 18835
Alignment:
Q  18 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttc 117  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||  |||||||||||     
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  118 tgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    ||||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||||| |||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcc 18835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 19069 - 19169
Alignment:
Q  88 aaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagccaa 187  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 19168  T
Q  188 a 188  Q
    |    
T  19169 a 19169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  109 gttttgttc 117  Q
    |||||||||    
T  16572 gttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 16880 - 17023
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgtttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  124 aaaagggcaggaccagtttcgtgagtaggacaaaacacgaggac 167  Q
    |||| ||| ||| |||||||||||||| | ||||||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggac 17023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 28662 - 28784
Alignment:
Q  59 aaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaa 158  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  159 cacgaggactaaaagtgtaatta 181  Q
    ||||| ||| |||||||||||||    
T  28762 cacgatgaccaaaagtgtaatta 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 184
Target Start/End: Complemental strand, 709 - 568
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagttt 142  Q
    ||||||||||||| || ||||||| |||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  143 cgtgagtaggacaaaacacgaggactaaaagtgtaattaagc 184  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 61862 - 62000
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||   ||||||||| ||||||||||| ||||||| ||||    
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    ||||||||  |||||||||||||  ||||||||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 61102 - 61028
Alignment:
Q  111 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaagcc 185  Q
    |||||||| |||||||| ||||||| || ||||||||||||| |||||||||||||  ||||||||| |||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagcc 61028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 7691 - 7784
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggac 136  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||| |||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 8453 - 8551
Alignment:
Q  84 caacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggacaaaacacgaggactaaaagtgtaattaa 182  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||| |||||  ||||||| || ||| ||||||||||||||    
T  8453 caacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 589 - 454
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatacaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| |||||||||| | ||||||||||||| |||||||||||||||||||| |||  || |||| |||||||||||  || ||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  144 gtgagtaggacaaaacacgaggactaaaagtgtaatta 181  Q
    ||||||||| |||||||||| ||| |||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University