View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2848_high_61 (Length: 252)

Name: NF2848_high_61
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2848_high_61
NF2848_high_61
[»] chr6 (22 HSPs)
chr6 (21-234)||(14278105-14278325)
chr6 (81-154)||(14258375-14258448)
chr6 (21-140)||(14283685-14283804)
chr6 (178-233)||(20863401-20863456)
chr6 (175-234)||(28363960-28364019)
chr6 (175-232)||(33549127-33549184)
chr6 (175-234)||(6776601-6776660)
chr6 (175-214)||(12188317-12188356)
chr6 (175-225)||(31622994-31623044)
chr6 (175-216)||(10338186-10338227)
chr6 (175-214)||(24641204-24641243)
chr6 (174-216)||(8639128-8639170)
chr6 (152-226)||(13661520-13661594)
chr6 (182-216)||(23910123-23910157)
chr6 (175-229)||(30127423-30127477)
chr6 (175-205)||(34786477-34786507)
chr6 (175-232)||(6385885-6385942)
chr6 (191-228)||(14199947-14199984)
chr6 (174-234)||(11103429-11103489)
chr6 (175-231)||(19638001-19638057)
chr6 (181-233)||(20213070-20213122)
chr6 (181-233)||(22107093-22107145)
[»] scaffold1030 (1 HSPs)
scaffold1030 (21-147)||(3165-3291)
[»] chr3 (49 HSPs)
chr3 (153-232)||(31520601-31520681)
chr3 (175-234)||(4222164-4222223)
chr3 (175-234)||(46518651-46518710)
chr3 (178-234)||(31608518-31608574)
chr3 (176-234)||(31788964-31789022)
chr3 (175-233)||(32651433-32651491)
chr3 (175-219)||(7975441-7975485)
chr3 (175-231)||(30311329-30311385)
chr3 (175-234)||(27093355-27093414)
chr3 (176-234)||(27259185-27259243)
chr3 (176-234)||(28703398-28703456)
chr3 (188-233)||(3427548-3427593)
chr3 (177-234)||(10445133-10445190)
chr3 (176-229)||(11090164-11090217)
chr3 (175-232)||(21960574-21960631)
chr3 (175-232)||(51903874-51903931)
chr3 (175-219)||(28531067-28531111)
chr3 (182-234)||(39253727-39253779)
chr3 (175-230)||(14339633-14339688)
chr3 (175-234)||(15048055-15048114)
chr3 (178-229)||(44069784-44069835)
chr3 (175-233)||(2667885-2667943)
chr3 (175-233)||(36720404-36720462)
chr3 (174-236)||(47860778-47860839)
chr3 (175-216)||(4844523-4844564)
chr3 (175-216)||(4870219-4870260)
chr3 (179-216)||(44743867-44743904)
chr3 (175-216)||(47279416-47279457)
chr3 (153-232)||(10499105-10499185)
chr3 (175-211)||(28928896-28928932)
chr3 (183-234)||(2709408-2709459)
chr3 (175-234)||(16354886-16354945)
chr3 (191-230)||(17108896-17108935)
chr3 (175-230)||(47454615-47454670)
chr3 (175-234)||(53412968-53413027)
chr3 (175-209)||(9557343-9557377)
chr3 (175-213)||(17554794-17554832)
chr3 (175-233)||(37788460-37788518)
chr3 (186-232)||(51766929-51766975)
chr3 (176-233)||(13808880-13808937)
chr3 (175-232)||(14186671-14186727)
chr3 (175-232)||(16991565-16991622)
chr3 (179-232)||(26481954-26482007)
chr3 (175-216)||(40063642-40063683)
chr3 (153-216)||(5499419-5499483)
chr3 (175-215)||(18319181-18319221)
chr3 (175-219)||(42430357-42430400)
chr3 (178-234)||(53863862-53863917)
chr3 (178-230)||(54990728-54990780)
[»] chr2 (32 HSPs)
chr2 (175-234)||(1729839-1729898)
chr2 (175-234)||(16918572-16918631)
chr2 (175-232)||(42602577-42602634)
chr2 (175-231)||(42327392-42327448)
chr2 (175-234)||(11251110-11251169)
chr2 (153-230)||(37480075-37480153)
chr2 (181-234)||(14500306-14500359)
chr2 (176-232)||(4262298-4262354)
chr2 (150-233)||(11062357-11062441)
chr2 (175-230)||(29503294-29503349)
chr2 (175-234)||(34041582-34041641)
chr2 (175-233)||(19322791-19322849)
chr2 (151-215)||(4438992-4439057)
chr2 (145-233)||(5147674-5147763)
chr2 (175-232)||(7799031-7799088)
chr2 (175-216)||(12086141-12086182)
chr2 (178-234)||(28194256-28194311)
chr2 (175-234)||(42922437-42922497)
chr2 (175-234)||(19244132-19244191)
chr2 (175-230)||(23052521-23052576)
chr2 (183-230)||(38410438-38410485)
chr2 (175-230)||(39715015-39715070)
chr2 (149-214)||(16381668-16381734)
chr2 (153-230)||(19016031-19016109)
chr2 (178-216)||(30359680-30359718)
chr2 (175-213)||(30410564-30410602)
chr2 (175-216)||(12994388-12994429)
chr2 (193-234)||(45026784-45026825)
chr2 (178-234)||(8192474-8192529)
chr2 (197-233)||(12497777-12497813)
chr2 (178-230)||(12517751-12517803)
chr2 (175-231)||(26545863-26545919)
[»] chr5 (30 HSPs)
chr5 (175-232)||(14495801-14495858)
chr5 (175-234)||(34984829-34984888)
chr5 (175-234)||(27596350-27596409)
chr5 (152-234)||(29075780-29075863)
chr5 (175-234)||(43442219-43442278)
chr5 (179-216)||(84851-84888)
chr5 (175-228)||(87423-87476)
chr5 (177-234)||(14285186-14285243)
chr5 (175-232)||(29692382-29692439)
chr5 (175-216)||(30883210-30883251)
chr5 (151-234)||(7918463-7918547)
chr5 (175-234)||(16773830-16773889)
chr5 (174-233)||(17028259-17028318)
chr5 (175-234)||(18595995-18596054)
chr5 (175-234)||(25627080-25627139)
chr5 (175-234)||(37258360-37258419)
chr5 (181-232)||(39327086-39327137)
chr5 (176-230)||(41165627-41165681)
chr5 (175-216)||(16457833-16457874)
chr5 (175-232)||(22020858-22020915)
chr5 (176-233)||(25979194-25979251)
chr5 (152-209)||(8278294-8278352)
chr5 (175-216)||(1410671-1410712)
chr5 (175-216)||(4793100-4793141)
chr5 (175-216)||(16436641-16436681)
chr5 (175-208)||(17761375-17761408)
chr5 (152-212)||(18989017-18989078)
chr5 (175-208)||(21549157-21549190)
chr5 (176-233)||(43230769-43230826)
chr5 (186-234)||(21086748-21086796)
[»] chr4 (48 HSPs)
chr4 (177-234)||(37274453-37274510)
chr4 (175-234)||(37109345-37109404)
chr4 (175-234)||(38869791-38869850)
chr4 (175-234)||(53496900-53496959)
chr4 (176-233)||(23377980-23378037)
chr4 (175-234)||(4249200-4249259)
chr4 (175-234)||(7949448-7949507)
chr4 (175-234)||(31759652-31759711)
chr4 (176-229)||(5450117-5450170)
chr4 (182-234)||(28635726-28635778)
chr4 (153-212)||(51250538-51250598)
chr4 (175-234)||(19680782-19680841)
chr4 (153-215)||(37720227-37720290)
chr4 (179-230)||(39509097-39509148)
chr4 (176-234)||(3743104-3743162)
chr4 (175-233)||(7292793-7292851)
chr4 (151-216)||(9241037-9241103)
chr4 (177-234)||(2622389-2622446)
chr4 (152-216)||(19238589-19238654)
chr4 (182-231)||(48480823-48480872)
chr4 (175-232)||(49576890-49576947)
chr4 (175-231)||(8714702-8714758)
chr4 (151-234)||(46545709-46545793)
chr4 (175-234)||(1730483-1730542)
chr4 (175-234)||(11592147-11592206)
chr4 (176-227)||(12821992-12822043)
chr4 (175-230)||(30938217-30938272)
chr4 (155-229)||(40283985-40284060)
chr4 (175-234)||(52880165-52880224)
chr4 (175-233)||(13265103-13265161)
chr4 (178-216)||(32992638-32992676)
chr4 (180-214)||(46329192-46329226)
chr4 (178-216)||(47202435-47202473)
chr4 (153-230)||(55427198-55427276)
chr4 (175-216)||(8030216-8030257)
chr4 (182-219)||(14451755-14451792)
chr4 (175-234)||(15180764-15180820)
chr4 (175-216)||(16581716-16581757)
chr4 (175-216)||(17618304-17618345)
chr4 (175-216)||(31826632-31826673)
chr4 (179-232)||(38838824-38838877)
chr4 (178-234)||(7093395-7093450)
chr4 (178-230)||(8325377-8325429)
chr4 (153-216)||(21344817-21344880)
chr4 (175-231)||(33619229-33619285)
chr4 (175-215)||(33632149-33632189)
chr4 (178-230)||(46295123-46295175)
chr4 (151-230)||(47044715-47044795)
[»] chr1 (46 HSPs)
chr1 (175-231)||(15786317-15786373)
chr1 (175-234)||(8177176-8177235)
chr1 (175-234)||(10526846-10526905)
chr1 (175-234)||(33700767-33700826)
chr1 (153-228)||(41508831-41508907)
chr1 (153-232)||(51814494-51814574)
chr1 (175-234)||(2799885-2799944)
chr1 (177-232)||(18459227-18459282)
chr1 (175-234)||(21267987-21268046)
chr1 (175-234)||(36371493-36371552)
chr1 (175-214)||(44046162-44046201)
chr1 (153-230)||(19528325-19528403)
chr1 (156-232)||(9964441-9964518)
chr1 (151-234)||(9165189-9165273)
chr1 (154-233)||(44126396-44126476)
chr1 (175-234)||(6650618-6650677)
chr1 (175-222)||(9643815-9643862)
chr1 (175-234)||(51703802-51703861)
chr1 (175-234)||(52336768-52336827)
chr1 (176-234)||(4566572-4566630)
chr1 (175-233)||(11063579-11063637)
chr1 (175-216)||(31794276-31794317)
chr1 (178-230)||(4824997-4825049)
chr1 (176-232)||(12587294-12587350)
chr1 (182-234)||(22049822-22049874)
chr1 (153-216)||(40257399-40257463)
chr1 (191-234)||(3265963-3266006)
chr1 (175-234)||(8904437-8904496)
chr1 (181-232)||(12370192-12370243)
chr1 (175-230)||(25297795-25297850)
chr1 (183-234)||(40810498-40810549)
chr1 (177-232)||(50901607-50901662)
chr1 (175-233)||(6122817-6122875)
chr1 (153-214)||(16169992-16170054)
chr1 (186-232)||(17439951-17439997)
chr1 (176-234)||(31049637-31049695)
chr1 (181-230)||(17297013-17297062)
chr1 (175-208)||(31383818-31383851)
chr1 (175-216)||(47753737-47753778)
chr1 (195-232)||(51281394-51281431)
chr1 (175-216)||(52116793-52116834)
chr1 (178-230)||(952537-952589)
chr1 (190-234)||(1247151-1247195)
chr1 (175-215)||(24730407-24730447)
chr1 (178-230)||(39714777-39714828)
chr1 (182-230)||(48615341-48615389)
[»] scaffold0299 (1 HSPs)
scaffold0299 (175-234)||(11551-11610)
[»] chr7 (50 HSPs)
chr7 (175-234)||(26459404-26459463)
chr7 (150-233)||(18363693-18363777)
chr7 (177-232)||(17041008-17041063)
chr7 (155-216)||(21854550-21854612)
chr7 (175-233)||(43215207-43215265)
chr7 (153-232)||(5273586-5273666)
chr7 (175-231)||(30442511-30442567)
chr7 (175-231)||(31706448-31706504)
chr7 (175-234)||(7744106-7744165)
chr7 (152-234)||(15137552-15137635)
chr7 (175-230)||(22760886-22760941)
chr7 (151-233)||(39631842-39631925)
chr7 (175-233)||(9608624-9608682)
chr7 (175-233)||(9836196-9836254)
chr7 (180-234)||(9871280-9871334)
chr7 (183-233)||(37094780-37094830)
chr7 (176-233)||(23552142-23552199)
chr7 (175-216)||(25021347-25021388)
chr7 (175-216)||(25590634-25590675)
chr7 (178-231)||(29385740-29385793)
chr7 (175-216)||(29785313-29785354)
chr7 (175-208)||(48771961-48771994)
chr7 (178-230)||(5579232-5579284)
chr7 (175-219)||(19553477-19553520)
chr7 (176-216)||(26703149-26703189)
chr7 (176-216)||(37233584-37233624)
chr7 (178-230)||(38374597-38374649)
chr7 (150-213)||(42836016-42836080)
chr7 (175-234)||(7721392-7721451)
chr7 (175-230)||(11720958-11721013)
chr7 (175-230)||(20335829-20335884)
chr7 (175-234)||(25655222-25655281)
chr7 (175-234)||(33222393-33222452)
chr7 (175-234)||(41519258-41519317)
chr7 (182-233)||(42262090-42262141)
chr7 (175-230)||(43590930-43590985)
chr7 (178-208)||(5934147-5934177)
chr7 (153-234)||(30579335-30579417)
chr7 (153-209)||(2446308-2446365)
chr7 (175-216)||(3280497-3280538)
chr7 (175-216)||(7801203-7801244)
chr7 (175-208)||(15905693-15905726)
chr7 (175-232)||(20952145-20952202)
chr7 (175-216)||(28236593-28236634)
chr7 (175-216)||(45709720-45709761)
chr7 (174-234)||(17113817-17113877)
chr7 (175-219)||(25956302-25956345)
chr7 (176-216)||(30217903-30217943)
chr7 (153-216)||(31835192-31835256)
chr7 (151-234)||(33869439-33869523)
[»] scaffold0194 (1 HSPs)
scaffold0194 (175-232)||(13042-13099)
[»] chr8 (36 HSPs)
chr8 (175-234)||(35690058-35690117)
chr8 (175-232)||(968385-968442)
chr8 (175-216)||(2203515-2203556)
chr8 (175-232)||(3624603-3624660)
chr8 (175-232)||(7140732-7140789)
chr8 (175-231)||(11492070-11492126)
chr8 (181-229)||(11793520-11793568)
chr8 (177-233)||(44780109-44780165)
chr8 (175-234)||(3305182-3305241)
chr8 (175-234)||(6536543-6536602)
chr8 (175-230)||(16852363-16852418)
chr8 (175-234)||(18540321-18540380)
chr8 (175-230)||(19703485-19703540)
chr8 (175-234)||(23361643-23361702)
chr8 (190-232)||(22193360-22193402)
chr8 (176-234)||(33017238-33017296)
chr8 (178-219)||(3524410-3524451)
chr8 (175-216)||(28783083-28783124)
chr8 (156-216)||(36205198-36205259)
chr8 (176-208)||(6569791-6569823)
chr8 (153-216)||(26688865-26688929)
chr8 (176-232)||(34628666-34628722)
chr8 (175-234)||(6436549-6436608)
chr8 (175-234)||(8794339-8794398)
chr8 (175-210)||(30483902-30483937)
chr8 (175-233)||(11819799-11819857)
chr8 (175-233)||(27750753-27750811)
chr8 (175-232)||(4435998-4436055)
chr8 (175-232)||(12281517-12281574)
chr8 (185-234)||(24675506-24675555)
chr8 (175-216)||(29858061-29858102)
chr8 (175-232)||(30774732-30774789)
chr8 (173-230)||(40136961-40137017)
chr8 (176-233)||(43594313-43594370)
chr8 (153-216)||(8059632-8059696)
chr8 (182-234)||(18128540-18128591)
[»] scaffold0258 (1 HSPs)
scaffold0258 (175-232)||(15319-15376)
[»] scaffold0006 (1 HSPs)
scaffold0006 (177-234)||(18324-18381)
[»] scaffold0417 (1 HSPs)
scaffold0417 (153-232)||(10219-10299)
[»] scaffold0291 (1 HSPs)
scaffold0291 (175-230)||(2468-2523)
[»] scaffold0180 (1 HSPs)
scaffold0180 (175-234)||(19956-20015)
[»] scaffold1367 (1 HSPs)
scaffold1367 (175-233)||(835-893)
[»] scaffold0004 (1 HSPs)
scaffold0004 (176-230)||(81562-81616)
[»] scaffold0002 (1 HSPs)
scaffold0002 (175-216)||(94983-95024)
[»] scaffold0021 (1 HSPs)
scaffold0021 (175-215)||(157000-157040)
[»] scaffold0172 (1 HSPs)
scaffold0172 (175-230)||(15775-15830)
[»] scaffold0063 (1 HSPs)
scaffold0063 (175-218)||(35399-35442)
[»] scaffold0238 (1 HSPs)
scaffold0238 (177-234)||(5218-5275)
[»] scaffold0009 (1 HSPs)
scaffold0009 (175-208)||(19867-19900)
[»] scaffold0047 (1 HSPs)
scaffold0047 (153-212)||(14987-15047)
[»] scaffold0032 (1 HSPs)
scaffold0032 (153-232)||(112282-112362)


Alignment Details
Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 234
Target Start/End: Complemental strand, 14278325 - 14278105
Alignment:
Q  21 caagtctataaggtatgattagcaatactactaa-------tgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatg 113  Q
    ||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14278325 caagtttataaggtatgattagcaatactactaaatactaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatg 14278226  T
Q  114 gattccatcctaagtaagaataactaccaagtatttaataacccacatgggtttgcctgatgtattggcttgggatctgggagtgtgctcctcctcaagg 213  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||| ||||||||| ||||    
T  14278225 gattccatcctaagtaagaataactacaaagtatttaataacccacatgggttggcctggtgtattggctttggacctgggagtgcgctcctccttaagg 14278126  T
Q  214 tcttagatttgattctctctg 234  Q
    ||| || ||||||||||||||    
T  14278125 tctcaggtttgattctctctg 14278105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 14258448 - 14258375
Alignment:
Q  81 tagtaagaatgaagtgatgcttattacattatggattccatcctaagtaagaataactaccaagtatttaataa 154  Q
    |||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||| | |||||||||||    
T  14258448 tagtaagaataaagtgatgcttattaaattgtggattgcatcctaagtaagaataactactatgtatttaataa 14258375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 14283804 - 14283685
Alignment:
Q  21 caagtctataaggtatgattagcaata-ctactaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattcc 119  Q
    ||||| ||||||||||||||| | ||| |||| || |||||||||||||| ||||| || ||||||||||| |||||||||||| || ||| |||||| |    
T  14283804 caagtttataaggtatgattatccataactaccaa-gtatttcttttgtacttctactacctagtaagaataaagtgatgcttactaaattgtggattgc 14283706  T
Q  120 atcctaagtaagaataactac 140  Q
    |||||||||||| | ||||||    
T  14283705 atcctaagtaagtagaactac 14283685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 20863401 - 20863456
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||  | |||||||||||||||||||||||| ||||||||||||||||    
T  20863401 ttggcttgggactttggagtgtgctcctcctcaaggtctcagatttgattctctct 20863456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 28363960 - 28364019
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||| |||||||||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  28363960 gtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctg 28364019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 33549127 - 33549184
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||| |||||||||||||||||||| |||||| || || |||||||||    
T  33549127 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 6776660 - 6776601
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||| |||||||||||||| | |||| |  ||||||||||||||    
T  6776660 gtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctg 6776601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 12188356 - 12188317
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggt 214  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  12188356 gtattggcttgggacctgggagtgtgctcctcctcaaggt 12188317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 31623044 - 31622994
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttga 225  Q
    |||||||||||||| |||||||||||||||||||| |||||| || |||||    
T  31623044 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttga 31622994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 10338227 - 10338186
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  10338227 gtattggcttgggacctaggagtgtgctcctcctcaaggtct 10338186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 24641243 - 24641204
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggt 214  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  24641243 gtattgacttgggatctgggagtgtgctcctcctcgaggt 24641204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 8639128 - 8639170
Alignment:
Q  174 tgtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||| ||||||| | ||||||||||||||||||||    
T  8639128 tgtattggcttgagatctggaaatgtgctcctcctcaaggtct 8639170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 13661520 - 13661594
Alignment:
Q  152 taacccacatgggtttgcctgatgtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgat 226  Q
    ||||||||||||||| | ||  ||||||||||||  |  ||||||||||||||||||| |||||| || ||||||    
T  13661520 taacccacatgggttggtctagtgtattggcttgacacttgggagtgtgctcctcctcgaggtctcaggtttgat 13661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 23910157 - 23910123
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||||||||||||||||||||||||    
T  23910157 cttgggacctgggagtgtgctcctcctcaaggtct 23910123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 30127423 - 30127477
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattct 229  Q
    ||||||||||||| |||||||||||||||||| || |||||| || || ||||||    
T  30127423 gtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattct 30127477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 34786507 - 34786477
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcct 205  Q
    |||||||||||||||||||||||||||||||    
T  34786507 gtattggcttgggatctgggagtgtgctcct 34786477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 6385885 - 6385942
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||| ||||||| |||||| |||||||||||| ||||||| || || |||||||||    
T  6385885 gtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctc 6385942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 14199984 - 14199947
Alignment:
Q  191 tgggagtgtgctcctcctcaaggtcttagatttgattc 228  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  14199984 tgggagtgtgctcctcctcaaggtctcagattcgattc 14199947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 11103489 - 11103429
Alignment:
Q  174 tgtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| ||||||||  ||| |||||||||||||| |||||||  |||| |||||||||||    
T  11103489 tgtattcgcttgggacttggtagtgtgctcctccttaaggtctccgattcgattctctctg 11103429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 19638057 - 19638001
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||||||| ||| | |||||||||||||||  |||||||||| || |||||||||||    
T  19638057 gtattggcgtggaacctgggagtgtgctccagctcaaggtctcaggtttgattctct 19638001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 20213070 - 20213122
Alignment:
Q  181 gcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||| |||||||||||||||||||||| |||| || || ||||| ||||    
T  20213070 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 20213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 22107093 - 22107145
Alignment:
Q  181 gcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||| |||||||||||||||||||||| |||| || || ||||| ||||    
T  22107093 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 22107145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1030 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold1030
Description:

Target: scaffold1030; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 3165 - 3291
Alignment:
Q  21 caagtctataaggtatgattagcaatactactaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattcca 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3165 caagtttataaggtatgattagcaatactactaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattcca 3264  T
Q  121 tcctaagtaagaataactaccaagtat 147  Q
    |||||||||||||||||||| ||||||    
T  3265 tcctaagtaagaataactacaaagtat 3291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 31520681 - 31520601
Alignment:
Q  153 aacccacatgggtttgcctgatgt-attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| |||||| ||||| ||  ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctc 31520601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 4222164 - 4222223
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  4222164 gtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctg 4222223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 46518651 - 46518710
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||    
T  46518651 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctg 46518710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 31608574 - 31608518
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  31608574 ttggcttgagatctgggagtgtgctcctcctcgaggtctcagatttgattctctctg 31608518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 31789022 - 31788964
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||    
T  31789022 tattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatctctg 31788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 32651491 - 32651433
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||    
T  32651491 gtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctct 32651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 7975441 - 7975485
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttag 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  7975441 gtataggcttgggatctgggagtgtgctcctcctcaaggtcttag 7975485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 30311329 - 30311385
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || ||||||||    
T  30311329 gtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 30311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 27093414 - 27093355
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| |  |||||||||||||||||||||||||| || ||||||||||||||    
T  27093414 gtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctg 27093355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 27259185 - 27259243
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||| |||||||||||||||||||| |||| | || ||||||||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctctg 27259243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 28703456 - 28703398
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||| |||||||||||||||||||||||||| ||||||||| || || |||||||||||    
T  28703456 tattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctg 28703398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 3427593 - 3427548
Alignment:
Q  188 atctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  3427593 atctgggagtgtgctcctcctcaaggtctcagattcgattctctct 3427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 10445190 - 10445133
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| |||||||||||||||||||| |||||| || || |||||||||||    
T  10445190 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 10445133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 11090217 - 11090164
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattct 229  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| || ||||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggtcttagtttcgattct 11090164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 21960574 - 21960631
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||| ||| |||||||||||||||| |||||| ||||| |||||||||    
T  21960574 gtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 51903931 - 51903874
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||||||||||||||||||||||||  ||||| || || |||||||||    
T  51903931 gtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctc 51903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 28531111 - 28531067
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttag 219  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtcttag 28531067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 39253727 - 39253779
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||||||||||||| ||||||||| || || |||||||||||    
T  39253727 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctg 39253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 14339633 - 14339688
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||||||| ||||||||||||||||||||| |||| || || |||||||    
T  14339633 gtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 15048114 - 15048055
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||| |||||||||||||||| |||||||||||||||||||| || || |||| ||||||    
T  15048114 gtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctg 15048055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 44069784 - 44069835
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattct 229  Q
    |||||||| ||||| |||||||||||||||||||||||| || |||||||||    
T  44069784 ttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgattct 44069835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 2667885 - 2667943
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||||||||||||||||||||| ||||| |||||| || || |||| |||||    
T  2667885 gtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctct 2667943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 36720404 - 36720462
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||||||| ||||||||||||||||||| |||| | || || ||||||||||    
T  36720404 gtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctct 36720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 47860778 - 47860839
Alignment:
Q  174 tgtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctgct 236  Q
    ||||||||||| |||||| ||||||||||||||||||| |||| || || |||||||||||||    
T  47860778 tgtattggctttggatctaggagtgtgctcctcctcaaagtctcag-ttcgattctctctgct 47860839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 4844564 - 4844523
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  4844564 gtattgacttgggatctgggagtgtgctcctcctcgaggtct 4844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 4870260 - 4870219
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  4870260 gtattgacttgggatctgggagtgtgctcctcctcgaggtct 4870219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 44743904 - 44743867
Alignment:
Q  179 tggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtct 44743867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 47279457 - 47279416
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  47279457 gtatttgcttgggatctgggagtgtgctcctccttaaggtct 47279416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 10499185 - 10499105
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| |||||| ||||| || |||||||||||||||||||||| ||||| ||||  |||||| || || |||||||||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctc 10499105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 28928932 - 28928896
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaa 211  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28928932 gtattggcttgggatctgagagtgtgctcctcctcaa 28928896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 2709408 - 2709459
Alignment:
Q  183 ttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||| ||| ||||||||||| |||| |||| ||||||||||||||    
T  2709408 ttgggatctggaagtatgctcctcctcgaggttttaggtttgattctctctg 2709459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 16354945 - 16354886
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| | ||| ||||||||||||||||| ||||| || || |||||||||||    
T  16354945 gtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctg 16354886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 17108935 - 17108896
Alignment:
Q  191 tgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  17108935 tgggagtgtgctcctcctcaaggtctcaggtttgattctc 17108896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 47454670 - 47454615
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||| ||||| ||||||||||||||||| |||||| || || |||||||    
T  47454670 gtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 53412968 - 53413027
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||  | ||||||||||||||||||||||||||| || ||  ||||||||||    
T  53412968 gtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctg 53413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 9557343 - 9557377
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctc 209  Q
    |||||||||||||||||| ||||||||||||||||    
T  9557343 gtattggcttgggatctgagagtgtgctcctcctc 9557377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 17554794 - 17554832
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaagg 213  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  17554794 gtattggcttgggacctgggagtgtgctcttcctcaagg 17554832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 37788518 - 37788460
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||| ||||| | || |||||||||||||||||||||||| || || ||||||||||    
T  37788518 gtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctct 37788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 51766929 - 51766975
Alignment:
Q  186 ggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||||||| |||||||||| | ||||| |||||||||    
T  51766929 ggatctgggagtgtgctcttcctcaaggtttcagattcgattctctc 51766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 13808937 - 13808880
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||| |||||||||||| ||||||||||||||| |||||| || ||  |||||||||    
T  13808937 tattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctct 13808880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 14186671 - 14186727
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||| ||||||| |||| |||||||||||||||||||||| || || |||||||||    
T  14186671 gtattgtcttgggacctgg-agtgtgctcctcctcaaggtctcaggttcgattctctc 14186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 16991565 - 16991622
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||||||||||||||||| ||| || |  |||||| || ||||||||||||    
T  16991565 gtattggcttgggatctgggagtgtactcttctttgaggtctcagttttgattctctc 16991622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 26481954 - 26482007
Alignment:
Q  179 tggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||| ||| |||||||||||||||||| || |||| || |||||||||    
T  26481954 tggcttgggacctgagagtgtgctcctcctcaaagttttaggttcgattctctc 26482007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 40063642 - 40063683
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||||||| |||| |||||||||| |||||||    
T  40063642 gtattggcttgggatctgagagtatgctcctccttaaggtct 40063683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 5499483 - 5499419
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||| ||||| || ||||| |||| |||||| ||||||||||||||| |||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtct 5499419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 18319221 - 18319181
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtc 215  Q
    ||||||| |||||| ||||||||||||||||| ||||||||    
T  18319221 gtattggtttgggacctgggagtgtgctcctcttcaaggtc 18319181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 42430357 - 42430400
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttag 219  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||    
T  42430357 gtattgacttgggatcttggagtgtgctcct-ctcaaggtcttag 42430400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 53863917 - 53863862
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||| || ||||||||||||| ||||||||||||| ||  ||||||||||    
T  53863917 ttggcttgggaccttggagtgtgctcct-ctcaaggtcttaggttcaattctctctg 53863862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 54990728 - 54990780
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||| || |||| ||||||||||||||||||| || || |||||||    
T  54990728 ttggcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctc 54990780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 1729839 - 1729898
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  1729839 gtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctg 1729898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 16918631 - 16918572
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  16918631 gtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctg 16918572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 42602577 - 42602634
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  42602577 gtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctc 42602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 42327448 - 42327392
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||||||||||||| ||||||||||||||||||||||||||| || || ||||||||    
T  42327448 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 11251110 - 11251169
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||  ||| |||||||||||||||||||||| || ||||||||||||||    
T  11251110 gtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctg 11251169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 37480075 - 37480153
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||| |||||| ||||| || ||||||||||||| ||| ||||||||||||||||||||||| || || |||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 14500306 - 14500359
Alignment:
Q  181 gcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  14500306 gcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctg 14500359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 4262354 - 4262298
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||||| |||| |||||||||||||||||||||| || || |||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 11062357 - 11062441
Alignment:
Q  150 aataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||| |||||| ||||  || ||||||||||| |  |||||||||||| ||||||||||||| || |||||||||||||    
T  11062357 aataacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctct 11062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 29503294 - 29503349
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||| |||||| ||||||||||||||||||||||||||| || || |||||||    
T  29503294 gtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 34041641 - 34041582
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| ||| ||||||| ||||||||||||||||||||||| || |||||||| |||||    
T  34041641 gtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctg 34041582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 19322791 - 19322849
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||| |||||| ||||||||||||||||| |||||||||  | |||||||||||||    
T  19322791 gtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctct 19322849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 4439057 - 4438992
Alignment:
Q  151 ataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtc 215  Q
    ||||||||| |||||| |||| ||| ||||  ||||||||||| ||||||||||||||||||||||    
T  4439057 ataacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtc 4438992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 5147763 - 5147674
Alignment:
Q  145 tatttaataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||||||| |||||| | ||  || ||||| |||| ||||||||||| ||||||| ||||||||||  |||| ||||||||||    
T  5147763 tatttaataacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctct 5147674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 7799088 - 7799031
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||||||  ||||||||||||||||||| || ||| ||||| |||||||||    
T  7799088 gtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctc 7799031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 12086182 - 12086141
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  12086182 gtattggcttgggacctggaagtgtgctcctcctcaaggtct 12086141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 28194311 - 28194256
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| ||||||||||||| || |||||||||| || |||||||||||    
T  28194311 ttggcttgggatcttggagtgtgctcct-cttaaggtcttaggttcgattctctctg 28194256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 42922437 - 42922497
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctc-aaggtcttagatttgattctctctg 234  Q
    |||||||||||| | |||||||||||||||||||| ||||||| || || |||||||||||    
T  42922437 gtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctg 42922497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 19244132 - 19244191
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| ||||||| ||| |||||||||||||| |||||||| || || |||||||||||    
T  19244132 gtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctg 19244191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 23052576 - 23052521
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||||||  |||||||||||| ||||||||||||| || || |||||||    
T  23052576 gtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctc 23052521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 38410485 - 38410438
Alignment:
Q  183 ttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||| |||||||||||||||| |||||||||  ||||||||||    
T  38410485 ttgggatctcggagtgtgctcctcctaaaggtcttatgtttgattctc 38410438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 39715015 - 39715070
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||| ||||||| |||||||||||||||||||| |||||| || || |||||||    
T  39715015 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 16381734 - 16381668
Alignment:
Q  149 taataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggt 214  Q
    ||||||||||| |||||| ||||  || ||| ||||||||||||| |||||| ||||||||||||||    
T  16381734 taataacccacttgggttggcctagtggtataggcttgggatctgagagtgttctcctcctcaaggt 16381668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 19016031 - 19016109
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||| |||||| | |||||| |||||||||| ||  ||||||||||||||||||| |||||| |  ||||||||||    
T  19016031 aacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctc 19016109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 30359680 - 30359718
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  30359680 ttggcttgggaccttggagtgtgctcctcctcaaggtct 30359718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 30410602 - 30410564
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaagg 213  Q
    |||||||||||||| || |||||||||||||||||||||    
T  30410602 gtattggcttgggacctaggagtgtgctcctcctcaagg 30410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 12994429 - 12994388
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||| ||||||| ||||||||||||||||||| |||||||    
T  12994429 gtattgacttgggacctgggagtgtgctcctccttaaggtct 12994388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 45026784 - 45026825
Alignment:
Q  193 ggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||| |  ||||||||||||||    
T  45026784 ggagtgtgctcctcctcaaggtctcatgtttgattctctctg 45026825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 8192529 - 8192474
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| ||||||||||||| |||||||||| || || ||||| |||||    
T  8192529 ttggcttgggatcttggagtgtgctcct-ctcaaggtctcaggttcgattccctctg 8192474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 12497813 - 12497777
Alignment:
Q  197 tgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  12497813 tgtgctcctcctcaaggtctcagattcgattctctct 12497777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 12517803 - 12517751
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||| || ||||| |||||||||||||||||| |  ||||||||||    
T  12517803 ttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgattctc 12517751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 26545863 - 26545919
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    ||||| ||||||||||||| ||||||||||| ||| |||||| |  |||||||||||    
T  26545863 gtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctct 26545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 14495858 - 14495801
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  14495858 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctc 14495801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 34984829 - 34984888
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| | |||||||||||||||||||||||||||||| || |||||||||||    
T  34984829 gtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 34984888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 27596350 - 27596409
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||| |||||||||||| |||||| ||||||||| |||||||||||| |||||||||||    
T  27596350 gtattagcttgggatctgagagtgtcctcctcctcgaggtcttagattcgattctctctg 27596409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 29075780 - 29075863
Alignment:
Q  152 taacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||| |||||||||||  || |||||||||||||||||||||||||||||||||| || ||| |  || |||||||||||    
T  29075780 taacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctg 29075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 43442219 - 43442278
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || || |||||||||||    
T  43442219 gtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 43442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 84851 - 84888
Alignment:
Q  179 tggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||||||||||||||||||||||||||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtct 84888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 87476 - 87423
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattc 228  Q
    |||||| ||||| ||||||||||||||||||||||||||||| || ||||||||    
T  87476 gtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc 87423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 14285186 - 14285243
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||| | ||||||||||||||||||||||||||| || || |||||||||||    
T  14285186 attggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 14285243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 29692439 - 29692382
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||||    
T  29692439 gtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctc 29692382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 30883251 - 30883210
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  30883251 gtattggcttgggacctgggagtgtgctcctcctcaaggtct 30883210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 7918547 - 7918463
Alignment:
Q  151 ataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||| |||||| ||||  || ||||||||||| | |||||||||  ||||||||||||||||||| || |||||||||||    
T  7918547 ataacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctg 7918463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 16773830 - 16773889
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| ||||||| |||||||||||||||||||| |||||| || || |||||||||||    
T  16773830 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 16773889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 17028318 - 17028259
Alignment:
Q  174 tgtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||| ||||||  |||||||||||||||||||||||||| || |||||||| ||||    
T  17028318 tgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 17028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 18596054 - 18595995
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||| || |||||| ||||||||||||||||||||||| || |||| ||||||    
T  18596054 gtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctg 18595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 25627080 - 25627139
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| |  |||||||||||||||||||||||||| || || |||||||||||    
T  25627080 gtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 25627139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 37258419 - 37258360
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||| ||||||||||| |||||||||||||||||||||| | || || |||||||||||    
T  37258419 gtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctg 37258360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 39327137 - 39327086
Alignment:
Q  181 gcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||  ||||||||||||||||||||||||||||| || |||||||||    
T  39327137 gcttgggacatgggagtgtgctcctcctcaaggtcttagcttcgattctctc 39327086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 41165681 - 41165627
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||| ||||||||||||||||||||||||| ||| | |||||||||| |||||||    
T  41165681 tattagcttgggatctgggagtgtgctccttctcgaagtcttagattcgattctc 41165627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 16457833 - 16457874
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  16457833 gtattggcttgggaccttggagtgtgctcctcctcaaggtct 16457874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 22020915 - 22020858
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||| ||||||||||||||||||||||||||||  | |||| ||||| |||||||||    
T  22020915 gtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctc 22020858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 25979194 - 25979251
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||| || ||||||||| |||||||||||||||| || || ||||||||||    
T  25979194 tattggcttggaatttgggagtgttctcctcctcaaggtctcaggttcgattctctct 25979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 8278352 - 8278294
Alignment:
Q  152 taacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctc 209  Q
    |||||||| |||||| | |||||| |||||||||||||  |||||||||||||||||||    
T  8278352 taacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctc 8278294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 1410712 - 1410671
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||| |||||||| ||||||||||||||||||| ||||||    
T  1410712 gtattgacttgggatatgggagtgtgctcctcctcgaggtct 1410671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 4793141 - 4793100
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||| |||||||||||||||||||| ||||||    
T  4793141 gtattggtttgggacctgggagtgtgctcctcctcgaggtct 4793100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 16436641 - 16436681
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  16436641 gtattggcttggga-cttggagtgtgctcctcctcaaggtct 16436681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 17761408 - 17761375
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcct 208  Q
    |||| |||||||||||||||||||||||||||||    
T  17761408 gtatcggcttgggatctgggagtgtgctcctcct 17761375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 18989078 - 18989017
Alignment:
Q  152 taacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaag 212  Q
    |||||||| ||||||||| ||||| | ||||||||||| || |||||||||||||| |||||    
T  18989078 taacccacttgggtttgcatgatggtgttggcttgggaccttggagtgtgctcctcttcaag 18989017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 21549190 - 21549157
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcct 208  Q
    |||||||||||||| |||||||||||||||||||    
T  21549190 gtattggcttgggacctgggagtgtgctcctcct 21549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 43230826 - 43230769
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||| |||| ||||||||||||||| ||| ||| |||||  |||||||||    
T  43230826 tattggcttgggttctgagagtgtgctcctccttaagatctcagattcaattctctct 43230769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 21086748 - 21086796
Alignment:
Q  186 ggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||| |||||||||||||||||| ||| ||||| |||| ||||||    
T  21086748 ggatctggcagtgtgctcctcctcaagatctcagattcgattatctctg 21086796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 37274510 - 37274453
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 37274453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 37109404 - 37109345
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||    
T  37109404 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 37109345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 38869791 - 38869850
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||    
T  38869791 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctg 38869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 53496900 - 53496959
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  53496900 gtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctctg 53496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 23377980 - 23378037
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 23378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 4249200 - 4249259
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||| |||||||||| | |||||||||||||||||||||||| || ||||||||||||||    
T  4249200 gtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctg 4249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 7949507 - 7949448
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| || |||||||||||||||||||||||| || || |||||||||||    
T  7949507 gtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctg 7949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 31759711 - 31759652
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||| |||||| ||||    
T  31759711 gtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctg 31759652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 5450117 - 5450170
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattct 229  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||    
T  5450117 tattggcttggaatctgggagtgtgctcctcctcaaggtttcagattcgattct 5450170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 28635726 - 28635778
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||||||  ||||||||| || |||||||||||    
T  28635726 cttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctg 28635778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 51250598 - 51250538
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaag 212  Q
    ||||||| |||||| ||||| || ||||||||||||||||||||||||||||| |||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaag 51250538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 19680841 - 19680782
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||| ||||||||  ||||||||||||| ||||||||||||||| || |||||||||||    
T  19680841 gtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctg 19680782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 37720290 - 37720227
Alignment:
Q  153 aacccacatgggtttgcctgatgt-attggcttgggatctgggagtgtgctcctcctcaaggtc 215  Q
    ||||||| |||||| ||||| ||| |||||||||||| |||||||||||| |||||||||||||    
T  37720290 aacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtc 37720227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 39509097 - 39509148
Alignment:
Q  179 tggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||||||||||||||||||||||| |||||| || || |||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 3743162 - 3743104
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||| ||||||||||  ||||||| ||||||||||| ||||||||| |||||||||||    
T  3743162 tattgacttgggatctaagagtgtgttcctcctcaagatcttagattcgattctctctg 3743104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 7292851 - 7292793
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||| | |||||||||||||||||||||| |||| || || ||||||||||    
T  7292851 gtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctct 7292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 9241103 - 9241037
Alignment:
Q  151 ataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||| |||||| ||||| || |||||||||||||||||| ||||||||||| ||| ||||||    
T  9241103 ataacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtct 9241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 2622446 - 2622389
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| |||||||||||||||||||| | |||| || || |||||||||||    
T  2622446 attggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctg 2622389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 19238654 - 19238589
Alignment:
Q  152 taacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||| |||||| ||||| || |||||||||||||  ||||||||||||||||||| ||||||    
T  19238654 taacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtct 19238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 48480872 - 48480823
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  48480872 cttgggatcttggagtgtcctcctcctcaaggtctcagatttaattctct 48480823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 49576947 - 49576890
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||| |||  |||||||||||||||||||||||||| || || |||||||||    
T  49576947 gtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 8714702 - 8714758
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    ||||||| |||||||||| ||| ||| ||||||||||||| | ||||||||||||||    
T  8714702 gtattggtttgggatctgagagcgtgttcctcctcaaggtttcagatttgattctct 8714758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 46545709 - 46545793
Alignment:
Q  151 ataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||| |||||| ||||  || |||||||||| || ||| ||||||||||||||||||| ||| ||||| |||| ||||||    
T  46545709 ataacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctg 46545793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 1730542 - 1730483
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| ||| ||||||||||||| |||| |||| |||||  ||||||||||    
T  1730542 gtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctg 1730483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 11592206 - 11592147
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| ||||||| ||| |||||||||||||||| ||||||||| || |||| ||||||    
T  11592206 gtattgccttgggacctgagagtgtgctcctcctccaggtcttaggttcgattatctctg 11592147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 12821992 - 12822043
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgatt 227  Q
    ||||| ||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  12821992 tattgacttgggatctgggagtgtgctcctgttcaaggtctcagattcgatt 12822043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 30938272 - 30938217
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||| ||||||||| ||||||||||||||||| |||||| || || |||||||    
T  30938272 gtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 40284060 - 40283985
Alignment:
Q  155 cccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattct 229  Q
    ||||| |||||| || ||||| |||||||||||||  |||||||||||  ||||||||||||| || |||||||||    
T  40284060 cccacttgggttggcatgatggtattggcttgggacttgggagtgtgcatctcctcaaggtctaaggtttgattct 40283985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 52880165 - 52880224
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||| || | | ||| ||||||| ||||||||||| |||||||||||||||||||    
T  52880165 gtattggctaggaacccgggggtgtgcttctcctcaaggttttagatttgattctctctg 52880224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 13265161 - 13265103
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||||| |||||| |||||||||||| | ||| | ||||| ||||||||||    
T  13265161 gtattggcttgggacctgggaatgtgctcctccttatggtttcagattcgattctctct 13265103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 32992638 - 32992676
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  32992638 ttggcttgggaccttggagtgtgctcctcctcaaggtct 32992676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 46329192 - 46329226
Alignment:
Q  180 ggcttgggatctgggagtgtgctcctcctcaaggt 214  Q
    ||||||||| |||||||||||||||||||||||||    
T  46329192 ggcttgggacctgggagtgtgctcctcctcaaggt 46329226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 47202473 - 47202435
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  47202473 ttggcttggaacctgggagtgtgctcctcctcaaggtct 47202435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 55427276 - 55427198
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||| |||||| ||||| || ||||||||||||| |||||||| ||||||| ||| |||||| || || |||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 8030257 - 8030216
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||| |||||||||  ||||||||||||||||||||||||||    
T  8030257 gtataggcttgggacttgggagtgtgctcctcctcaaggtct 8030216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 14451792 - 14451755
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttag 219  Q
    |||||||| || ||||||||||||||||||||||||||    
T  14451792 cttgggatatgagagtgtgctcctcctcaaggtcttag 14451755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 15180764 - 15180820
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| |||||||||   | |||||||||||||||| || |||||||||||    
T  15180764 gtattggcttgggacctgggagtg---tactcctcaaggtcttaggttcgattctctctg 15180820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 16581716 - 16581757
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||| | |||||||| ||||||||||||||||||    
T  16581716 gtattggcttggaacctgggagtctgctcctcctcaaggtct 16581757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 17618304 - 17618345
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||| || |||||||||||||||||||| ||||||    
T  17618304 gtattggcttgagacctgggagtgtgctcctcctcgaggtct 17618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 31826632 - 31826673
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  31826632 gtataggcttgggatttgcgagtgtgctcctcctcaaggtct 31826673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 38838824 - 38838877
Alignment:
Q  179 tggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| | ||| ||||| ||||||||||||||||||||| || |||||||||    
T  38838824 tggcttgagctcttggagtatgctcctcctcaaggtcttaggttcgattctctc 38838877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 7093395 - 7093450
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| |||||||||||||  ||||||| |||| || |||||||||||    
T  7093395 ttggcttgggatcttggagtgtgctcct-ttcaaggttttaggttcgattctctctg 7093450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 8325429 - 8325377
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||| || || ||||||||||| ||||||||||||||| || |||||||    
T  8325429 ttggcttgagaccttggagtgtgctcatcctcaaggtcttaggttcgattctc 8325377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 21344817 - 21344880
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||| |||||||| | ||||||||||| || ||||||||||||| ||||||||||    
T  21344817 aacccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcct-ctcaaggtct 21344880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 33619229 - 33619285
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||||||||| ||||||||||| ||| |||||||  ||||||||| || ||||||||    
T  33619229 gtattggcttaggatctgggagcgtggtcctccttgaggtcttaggttcgattctct 33619285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 33632189 - 33632149
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtc 215  Q
    |||||||||||| || ||||||| |||||||||||||||||    
T  33632189 gtattggcttggaatatgggagtatgctcctcctcaaggtc 33632149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 46295123 - 46295175
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||||||  | |||||||||||||||||||||||| || || |||||||    
T  46295123 ttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctc 46295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 47044715 - 47044795
Alignment:
Q  151 ataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||| ||| || ||||| || ||||| ||||||||||| |||| ||||||||||| |||||| || || |||||||    
T  47044715 ataacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 15786373 - 15786317
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||||||||    
T  15786373 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 8177235 - 8177176
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||||||||||||||||||| | || || |||||||||||    
T  8177235 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 8177176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 10526846 - 10526905
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||    
T  10526846 gtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctg 10526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 33700826 - 33700767
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||    
T  33700826 gtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 33700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 41508831 - 41508907
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattc 228  Q
    ||||||| |||||| ||||| || || ||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  41508831 aacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatttaattc 41508907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 51814494 - 51814574
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| |||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||| || || |||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 2799885 - 2799944
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||| |||||| |||||||||||||||||||||||||||||| || || |||||||||||    
T  2799885 gtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 2799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 18459282 - 18459227
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||    
T  18459282 attggcttgggacttgggagtgtgctcctccttgaggtcttagatttgattctctc 18459227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 21268046 - 21267987
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||  ||||||||||||||||||| ||||||| | ||||||||||||||    
T  21268046 gtattggcttgggacttgggagtgtgctcctcctctaggtcttgggtttgattctctctg 21267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 36371493 - 36371552
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| | ||||||||||||||||||||||||||| || || |||||||||||    
T  36371493 gtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctg 36371552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 44046201 - 44046162
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggt 214  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44046201 gtattggcttgggatctgggagtgtgctcctcctcaaggt 44046162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 19528403 - 19528325
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||| |||||| ||||| || ||||||||||||||||  ||||||||||||||||||||||| || || |||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 9964441 - 9964518
Alignment:
Q  156 ccacatgggtttgcctgatgt-attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||| |||||| ||||||||| |||| |||||||||||||||||||||| ||||||| |||| || ||||||| ||||    
T  9964441 ccacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctc 9964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 9165273 - 9165189
Alignment:
Q  151 ataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||| |||||| ||||  || ||||||||||||| |||||||||||||||||||||| |||| || ||  ||||||||||    
T  9165273 ataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctg 9165189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 44126396 - 44126476
Alignment:
Q  154 acccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||| |||||| ||||| || ||||| | ||||| |||||||||||||||||| | |||||| ||||||||||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctct 44126476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 6650618 - 6650677
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||| |||||| ||||||||||||| |||| || || |||||||||||    
T  6650618 gtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctg 6650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 9643862 - 9643815
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatt 222  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||    
T  9643862 gtattggcttgggatctgggagtgtgttcatcctcaaggtctcagatt 9643815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 51703802 - 51703861
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| |||||||||||||||||||||||| || | || || |||||||||||    
T  51703802 gtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctg 51703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 52336827 - 52336768
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||||||||||||| ||| ||| || || |||| ||||||    
T  52336827 gtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctg 52336768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 4566572 - 4566630
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||| | ||||||||||||||||||||| ||||| || || |||||||||||    
T  4566572 tattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctg 4566630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 11063579 - 11063637
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||||| |||  |||||| |||||||||||||||||| || ||||||||||    
T  11063579 gtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctct 11063637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 31794317 - 31794276
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  31794317 gtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 4824997 - 4825049
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||| || |||||||||||||| ||||||||| || ||||||||||    
T  4824997 ttggcttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctc 4825049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 12587294 - 12587350
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||| ||||||||||| |||||||||||||||| |||||| || || |||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 22049874 - 22049822
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||| ||||||||| ||||||||||| | ||||| |||||||||||    
T  22049874 cttgggatctgagagtgtgcttctcctcaaggtttgagattcgattctctctg 22049822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 40257399 - 40257463
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||| ||||| || |||||||||| || |||||||||||||||||||| ||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtct 40257463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 3265963 - 3266006
Alignment:
Q  191 tgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||||||||| || || |||||||||||    
T  3265963 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 3266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 8904437 - 8904496
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| |||||||| || ||||||||||||||||||||||| |  || |||||||||||    
T  8904437 gtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctg 8904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 12370192 - 12370243
Alignment:
Q  181 gcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||| |||||||||||||||||||| |||||| |  ||||||||||||    
T  12370192 gcttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 12370243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 25297795 - 25297850
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||| ||| ||||||| |||||||||||||||| |||||| || ||||||||||    
T  25297795 gtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctc 25297850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 40810498 - 40810549
Alignment:
Q  183 ttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||| ||||| ||||||||| || || |||||||||||    
T  40810498 ttgggatctgggagtgtgttcctcttcaaggtctcaggttcgattctctctg 40810549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 50901607 - 50901662
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||| |||| ||||||||||||||| |||||| | ||| |||||||||    
T  50901607 attggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc 50901662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 6122817 - 6122875
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||| |||||||||  |||||||||||||||||||||||||| || || ||||| ||||    
T  6122817 gtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 6122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 16170054 - 16169992
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggt 214  Q
    ||||||| |||||| ||||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggt 16169992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 17439951 - 17439997
Alignment:
Q  186 ggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||||    
T  17439951 ggatctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 17439997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 31049637 - 31049695
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||| |||||||||||||||| ||| ||| |  || |||||||||||    
T  31049637 tattggcttgggatctaggagtgtgctcctcctaaagatctcatcttcgattctctctg 31049695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 17297013 - 17297062
Alignment:
Q  181 gcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||| || |||||||||||||||||||||||| |  ||||||||||    
T  17297013 gcttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctc 17297062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 31383851 - 31383818
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcct 208  Q
    |||||||||||||| |||||||||||||||||||    
T  31383851 gtattggcttgggacctgggagtgtgctcctcct 31383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 47753737 - 47753778
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||| |||||||||| ||| ||||||||||||||||||||    
T  47753737 gtattgacttgggatctaggactgtgctcctcctcaaggtct 47753778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 51281394 - 51281431
Alignment:
Q  195 agtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||||||||||| || ||||||||||||    
T  51281394 agtgtgctcctcctcaaggtctcaggtttgattctctc 51281431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 52116834 - 52116793
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||||||  ||||||||||||||||||||| ||||    
T  52116834 gtattggcttgggacttgggagtgtgctcctcctcaatgtct 52116793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 952537 - 952589
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||| |||||||||||||| ||||||| |||| || || |||||||    
T  952537 ttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctc 952589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 1247151 - 1247195
Alignment:
Q  190 ctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||| |||||||||||||||| || || |||||||||||    
T  1247151 ctgggagtgtactcctcctcaaggtctcaggttcgattctctctg 1247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 24730407 - 24730447
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtc 215  Q
    |||||| |||| |||||||||||||||||||| ||||||||    
T  24730407 gtattgtcttgagatctgggagtgtgctcctcttcaaggtc 24730447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 39714828 - 39714777
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||||||||| ||||||||||||| |||||||||| |  ||||||||||    
T  39714828 ttggcttgggatcttggagtgtgctcct-ctcaaggtctcaagtttgattctc 39714777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 48615389 - 48615341
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||| |||||||||||||||||| |||||||| | | |||||||||||    
T  48615389 cttggaatctgggagtgtgctccttctcaaggtttcaaatttgattctc 48615341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 11551 - 11610
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||||||||||||||||||||||| |||||| || || |||||||||||    
T  11551 gtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 26459463 - 26459404
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||    
T  26459463 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 26459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 18363693 - 18363777
Alignment:
Q  150 aataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||| |||||| ||||  || ||| |||||| ||| |||||||||||||||||||||||||| || |||||||||||||    
T  18363693 aataacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctct 18363777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 17041063 - 17041008
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||||||||| |||||||||||||||||||||| || || |||||||||    
T  17041063 attggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 21854550 - 21854612
Alignment:
Q  155 cccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||| |||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctcaaagtct 21854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 43215207 - 43215265
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||||||||||||| || |||||||||||||||||||||||| || || ||||||||||    
T  43215207 gtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 5273666 - 5273586
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| |||||| ||||| || | ||||||||||| ||  |||||||||||||||||||||||||| ||||||| ||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctc 5273586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 30442511 - 30442567
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||||||||||||| |||||||| |||||||||||||||||| || || ||||||||    
T  30442511 gtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 31706448 - 31706504
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    ||||||| |||||| |||||||||||||| || ||||||||||||| ||||||||||    
T  31706448 gtattggtttgggacctgggagtgtgctcatcgtcaaggtcttagacttgattctct 31706504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 7744165 - 7744106
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||| ||||| |||||||||| | |||||||||||||||||| || ||||||||||||||    
T  7744165 gtataggcttaggatctgggactatgctcctcctcaaggtctcaggtttgattctctctg 7744106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 15137552 - 15137635
Alignment:
Q  152 taacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||| |||||| ||||| || || || |||||||| | |||||||||||||||||||||||| || || |||||||||||    
T  15137552 taacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctg 15137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 22760886 - 22760941
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||| ||||||| ||||||||||||||||||||||||||| || || |||||||    
T  22760886 gtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 39631842 - 39631925
Alignment:
Q  151 ataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||| |||||| ||||  || ||||||||||||| ||||||||  ||||||||||||||||| || || ||||||||||    
T  39631842 ataacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctct 39631925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 9608682 - 9608624
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||| |||||||||||||||||||| |||||||||||| ||| || || ||||||||||    
T  9608682 gtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9608624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 9836254 - 9836196
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||| |||||||||||||||||||| |||||||||||| ||| || || ||||||||||    
T  9836254 gtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 9871334 - 9871280
Alignment:
Q  180 ggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||| ||||||||||||||||||| | |||| ||||| |||||||||||    
T  9871334 ggcttgggatttgggagtgtgctcctcctcgaagtctcagattcgattctctctg 9871280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 37094780 - 37094830
Alignment:
Q  183 ttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||| |||||| ||||||||||||||| | ||||||||||||||    
T  37094780 ttgggatctggaagtgtgatcctcctcaaggtctcacatttgattctctct 37094830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 23552142 - 23552199
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |  || ||||||||||    
T  23552142 tattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctct 23552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 25021388 - 25021347
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  25021388 gtattggcttgggacctgggagtgtgctcctcctcaaagtct 25021347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 25590634 - 25590675
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  25590634 gtattggcttgagatctgggagtgtgctcctcctcgaggtct 25590675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 29385793 - 29385740
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    |||||||||||  | |||||||||||||||||||||||| || |||||||||||    
T  29385793 ttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctct 29385740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 29785354 - 29785313
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  29785354 gtataggcttgggatctggaagtgtgctcctcctcaaggtct 29785313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 48771961 - 48771994
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcct 208  Q
    ||||||||||||||||||||||||||||||||||    
T  48771961 gtattggcttgggatctgggagtgtgctcctcct 48771994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 5579284 - 5579232
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||| || |||||||||||||||||||||||| || ||||| ||||    
T  5579284 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctc 5579232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 19553477 - 19553520
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttag 219  Q
    |||||||||||| | ||||||||||||||||||||||||||||||    
T  19553477 gtattggcttgg-acctgggagtgtgctcctcctcaaggtcttag 19553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 26703149 - 26703189
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggtct 26703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 37233624 - 37233584
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  37233624 tattggcttgggatgtgggagtgtgctcctccttaaggtct 37233584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 38374649 - 38374597
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||| ||  |||||||||||||||||||||||||| || |||||||    
T  38374649 ttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctc 38374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 42836080 - 42836016
Alignment:
Q  150 aataacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaagg 213  Q
    |||||||||| |||||| ||||  || ||||||||||||| |||||||||||||| |||||||||    
T  42836080 aataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaagg 42836016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 7721392 - 7721451
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||| |||||| |||||||||| |||||||||||||||| |  || |||||||||||    
T  7721392 gtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctg 7721451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 11721013 - 11720958
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||||||||| |||||| |||||||||||| ||||| | ||||| |||||||    
T  11721013 gtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctc 11720958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 20335884 - 20335829
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||||||  ||||||||||||||||||| |||||| || || |||||||    
T  20335884 gtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 25655281 - 25655222
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| ||||||||||| ||||||| ||||||||||||| | || || |||||||||||    
T  25655281 gtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctg 25655222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 33222393 - 33222452
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| |||| ||||| ||| |||||||||||| || || |||||||||||    
T  33222393 gtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctg 33222452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 41519317 - 41519258
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| |||||||| | |||||||||||||||||||||||| || || | |||||||||    
T  41519317 gtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 42262141 - 42262090
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||| ||||||||||||||| ||||||| |||||  |||||||||    
T  42262141 cttgggatctgagagtgtgctcctcctaaaggtctcagattcaattctctct 42262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 43590930 - 43590985
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||||||  ||||||||||||||||||||| |||| || || |||||||    
T  43590930 gtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 5934147 - 5934177
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcct 208  Q
    |||||||||||||||||||||||||||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctcct 5934177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 30579335 - 30579417
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||| |||||| ||||| || |||||||||| || |||||||||| | |||||||||||||| || || |||| ||||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctg 30579417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 2446308 - 2446365
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctc 209  Q
    ||||||| |||||| | |||||| |||||||||||||  |||||||||||||||||||    
T  2446308 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctc 2446365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 3280538 - 3280497
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  3280538 gtattggcttgggacccgagagtgtgctcctcctcaaggtct 3280497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 7801203 - 7801244
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||| ||||||| ||||||||||||||||| |||||||||    
T  7801203 gtattgacttgggacctgggagtgtgctcctcttcaaggtct 7801244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 15905726 - 15905693
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcct 208  Q
    |||||||||||||| |||||||||||||||||||    
T  15905726 gtattggcttgggacctgggagtgtgctcctcct 15905693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 20952202 - 20952145
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| |||||| ||||||||||||||||||||||  ||| ||||| |||| ||||    
T  20952202 gtattggtttgggacctgggagtgtgctcctcctcaaaatctcagattcgattatctc 20952145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 28236634 - 28236593
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| ||||||||| |||||||||| ||||||    
T  28236634 gtattggcttgggacctgggagtgcgctcctcctcgaggtct 28236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 45709761 - 45709720
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||| |||||||||||| |||||||||||||||| ||||||    
T  45709761 gtattagcttgggatctgagagtgtgctcctcctcgaggtct 45709720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 17113817 - 17113877
Alignment:
Q  174 tgtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||| | | ||||||||||||| ||||||||||||| |  || |||||||||||    
T  17113817 tgtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctctg 17113877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 25956345 - 25956302
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttag 219  Q
    |||||||||||||| || ||||||||||||| |||||||||||||    
T  25956345 gtattggcttgggaccttggagtgtgctcct-ctcaaggtcttag 25956302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 30217903 - 30217943
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||  |||||| ||||||||||||||||||||||    
T  30217903 tattggcttgatatctggaagtgtgctcctcctcaaggtct 30217943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 31835192 - 31835256
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||| ||||| || | ||||||||||  || ||||||||||||||||||||||||    
T  31835192 aacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtct 31835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 33869523 - 33869439
Alignment:
Q  151 ataacccacatgggtttgcctgat-gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||| |||||| ||||  | ||||||||||| || |||| ||||||||||| ||||||||||  | || |||||||||||    
T  33869523 ataacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctg 33869439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 13099 - 13042
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||| |||||||||||||||||||||||||||||| || || |||||||||    
T  13099 gtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 35690117 - 35690058
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||||||||| || |||||||||||||||||| || || |||||||||||    
T  35690117 gtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctg 35690058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 968385 - 968442
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||| |||||||||||||||||||| |||||| || || |||||||||    
T  968385 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 2203515 - 2203556
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  2203515 gtattggcttgggacctgggagtgtgctcctcctcaaggtct 2203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 3624603 - 3624660
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||| ||||||||||||||||| ||||||||| || || |||||||||    
T  3624603 gtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 7140732 - 7140789
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||| |||||||||    
T  7140732 gtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctctc 7140789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 11492126 - 11492070
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctct 231  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||| || ||||||||    
T  11492126 gtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctct 11492070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 11793568 - 11793520
Alignment:
Q  181 gcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattct 229  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||||    
T  11793568 gcttgggaccttggagtgtgctcctcctcaaggtcttaggtttgattct 11793520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 44780165 - 44780109
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||||  |||||||||||||||||||||||||| || |||||||| ||||    
T  44780165 attggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 44780109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 3305241 - 3305182
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||| |||||||||||||| ||||||||||||||||||| | ||| |||| ||||||    
T  3305241 gtattggtttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctg 3305182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 6536543 - 6536602
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| || |||||||||||||||||||||||| || ||  ||||||||||    
T  6536543 gtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctg 6536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 16852363 - 16852418
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||||||||| |||||||||||||||||||| |||||| || || |||||||    
T  16852363 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 18540321 - 18540380
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||||| |||||||||| || ||||||||||||| || || |||||||||||    
T  18540321 gtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctg 18540380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 19703540 - 19703485
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||||||||||| ||| ||||||||||||||||||||||| || || |||||||    
T  19703540 gtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 23361702 - 23361643
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||| |||||||| |||||||||||||||||||||||||| || ||  ||||||||||    
T  23361702 gtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctg 23361643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 22193402 - 22193360
Alignment:
Q  190 ctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  22193402 ctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 22193360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 33017238 - 33017296
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||| | |||| |||||||||||||||||||||| || || |||||||||||    
T  33017238 tattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctg 33017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 3524451 - 3524410
Alignment:
Q  178 ttggcttgggatctgggagtgtgctcctcctcaaggtcttag 219  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  3524451 ttggcttgggaccttggagtgtgctcctcctcaaggtcttag 3524410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 28783083 - 28783124
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  28783083 gtattggcttgagacctgggagtgtgctcctcctcaaggtct 28783124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 36205198 - 36205259
Alignment:
Q  156 ccacatgggtttgcctgatgt-attggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||| |||||| | ||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  36205198 ccacttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaaggtct 36205259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 6569823 - 6569791
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcct 208  Q
    |||||||||||||||||||||||||||||||||    
T  6569823 tattggcttgggatctgggagtgtgctcctcct 6569791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 26688865 - 26688929
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||| ||||| || | ||||||||||| || ||||||||||||||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtct 26688929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 34628666 - 34628722
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||||||||||||||||| | |||||||| |||| || || |||||||||    
T  34628666 tattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgattctctc 34628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 6436608 - 6436549
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||||  | ||||||||||||||| |||||||| ||||| ||||| |||||    
T  6436608 gtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgattccctctg 6436549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 8794398 - 8794339
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| | |||| |||||||||||||||| ||||| || || |||||||||||    
T  8794398 gtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctg 8794339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 30483937 - 30483902
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctca 210  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30483937 gtattggcttgggatatgggagtgtgctcctcctca 30483902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 11819799 - 11819857
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||| |||||||||  |||||||||||||||||||||||||| || || ||||| ||||    
T  11819799 gtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactct 11819857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 27750753 - 27750811
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    |||| |||||||||  |||||||||||||||||||||||||| || || ||||| ||||    
T  27750753 gtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 27750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 4435998 - 4436055
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||||||| ||  |||||| ||||||||||||||||||| ||| | |||||||||    
T  4435998 gtattggcttgagacatgggagagtgctcctcctcaaggtctcagactcgattctctc 4436055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 12281517 - 12281574
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||| ||| |||||||| ||||||| |||||| ||||| |||| ||||    
T  12281517 gtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattttctc 12281574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 24675555 - 24675506
Alignment:
Q  185 gggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||| |||||||||||| |||||||||| ||||| |||| ||||||    
T  24675555 gggatctgagagtgtgctccttctcaaggtctcagattcgattttctctg 24675506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 29858102 - 29858061
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  29858102 gtattggcttgggaccagggagtgtgctcctcctcgaggtct 29858061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 30774789 - 30774732
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| ||||||||||| |||||| |||||||| |||||| ||||| |||| ||||    
T  30774789 gtattggtttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttctc 30774732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 40137017 - 40136961
Alignment:
Q  173 atgtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||| ||||||||||| || ||||||||||||| |||||||||| || ||||||||||    
T  40137017 atgtgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtttgattctc 40136961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 43594370 - 43594313
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||| |||||| ||| |||| ||||||||||||||| || || ||||||||||    
T  43594370 tattggcttaggatctaggaatgtgttcctcctcaaggtctcaggttcgattctctct 43594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 8059632 - 8059696
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    ||||||| |||||| |||||||| ||||| ||||| || || ||||||| |||||||||||||||    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtct 8059696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 18128540 - 18128591
Alignment:
Q  182 cttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||| | |||||||||||  ||||||||||||||| |||||||||||    
T  18128540 cttgggatcttgaagtgtgctcctt-tcaaggtcttagattcgattctctctg 18128591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 15376 - 15319
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    |||||||||||||| |||||||||||||||||||| |||||| || || |||||||||    
T  15376 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 18324 - 18381
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||| |||||||| |||||||||||||||||| | || ||||||||||||||    
T  18324 attggcttggaatctgggattgtgctcctcctcaaggtttcaggtttgattctctctg 18381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 10219 - 10299
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||||| ||  |||||| | ||||||  ||||||||||||    
T  10219 aacccacttgggttggcctgatgatattggcttgggatctgggagtgcgcctctcctcgaagtcttaagtttgattctctc 10299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 2523 - 2468
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||| || ||||||||||||||||||||||||||||||| || || |||||||    
T  2523 gtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 20015 - 19956
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    |||||||||||| | |||||||| |||||||||||||||||| || || |||||||||||    
T  20015 gtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctg 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 893 - 835
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctct 233  Q
    ||||||||||||||||||||| ||||||||||||| | |||| || || ||||||||||    
T  893 gtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctct 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 81616 - 81562
Alignment:
Q  176 tattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    |||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||    
T  81616 tattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgattctc 81562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 95024 - 94983
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 216  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  95024 gtattggcttggaacctgggagtgtgctcctcctcaaggtct 94983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 157040 - 157000
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtc 215  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  157040 gtattggcttgagatctgggagtgtgctcctcctcgaggtc 157000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 15830 - 15775
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctc 230  Q
    ||||||||||||||| | ||||| |||||||||||||||||| |  ||||||||||    
T  15830 gtattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctc 15775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 35442 - 35399
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcctcaaggtctta 218  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||    
T  35442 gtattggcttggaatctaggagtatgctcctcctcaaggtctta 35399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 5218 - 5275
Alignment:
Q  177 attggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctctg 234  Q
    ||||||||||||  |||||||||||||||||| || || |||| || |||||||||||    
T  5218 attggcttgggacttgggagtgtgctcctccttaaagttttaggttcgattctctctg 5275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 19900 - 19867
Alignment:
Q  175 gtattggcttgggatctgggagtgtgctcctcct 208  Q
    ||||||||||||||||||||||| ||||||||||    
T  19900 gtattggcttgggatctgggagtctgctcctcct 19867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 15047 - 14987
Alignment:
Q  153 aacccacatgggtttgcctgatg-tattggcttgggatctgggagtgtgctcctcctcaag 212  Q
    ||||||| |||||| | |||||| ||||||||| ||| |||||||| ||||||||||||||    
T  15047 aacccacttgggttagtctgatgctattggcttaggaactgggagtatgctcctcctcaag 14987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 112282 - 112362
Alignment:
Q  153 aacccacatgggtttgcctgat-gtattggcttgggatctgggagtgtgctcctcctcaaggtcttagatttgattctctc 232  Q
    ||||||| |||||| ||||| | |||||||||||| ||||||||||||| ||||| |  |||||| || || |||||||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctc 112362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University