View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2848_high_76 (Length: 237)
Name: NF2848_high_76
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2848_high_76 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 18913158 - 18912936
Alignment:
| Q |
1 |
ttactgtaggcattggagcatctgtccatgtttatgatttacgtaacttcgacaaaccaaatctgtcaacggagccttgcaatggcacacaattaagatg |
100 |
Q |
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| T |
18913158 |
ttactgtaggcattggagcatctgtccatgtttatgatttacgtaacttcgacaaaccaaatctgtcaatggagccttgcaatggtacacaattaagatg |
18913059 |
T |
|
| Q |
101 |
tgtcagttcaattccgtatgcagaaggtatgtaccatcaattctgtcttactttattttgtcaaccttggaacatgttgctattaagatttggcaacccc |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
18913058 |
tgtcagttcaattccgtatgcagaaggtatgtgccatcaattctgtcttactttattttgtcaaccttggaacatgttgctattaagatttgacaacccc |
18912959 |
T |
|
| Q |
201 |
ctccctcctttagctagtttttg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
18912958 |
ctccctcctttagctagtttttg |
18912936 |
T |
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