View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2848_low_1 (Length: 931)

Name: NF2848_low_1
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2848_low_1
NF2848_low_1
[»] chr6 (5 HSPs)
chr6 (260-828)||(26268467-26269016)
chr6 (36-158)||(2759204-2759327)
chr6 (161-209)||(26268336-26268384)
chr6 (41-160)||(28963824-28963944)
chr6 (41-124)||(29157136-29157222)
[»] chr2 (12 HSPs)
chr2 (1-140)||(30637187-30637326)
chr2 (30-163)||(30635784-30635917)
chr2 (36-123)||(6296860-6296945)
chr2 (36-125)||(10159667-10159754)
chr2 (36-123)||(22845430-22845516)
chr2 (37-123)||(28856147-28856231)
chr2 (36-123)||(35602657-35602744)
chr2 (52-158)||(30659169-30659271)
chr2 (92-161)||(17328443-17328512)
chr2 (86-123)||(19588682-19588719)
chr2 (36-111)||(30629915-30629990)
chr2 (166-209)||(33527724-33527767)
[»] chr8 (11 HSPs)
chr8 (36-158)||(31448813-31448934)
chr8 (36-158)||(43301692-43301813)
chr8 (36-125)||(4237290-4237378)
chr8 (36-125)||(4242029-4242117)
chr8 (39-123)||(8330329-8330411)
chr8 (36-116)||(25361670-25361747)
chr8 (36-123)||(37772777-37772864)
chr8 (37-95)||(21959473-21959529)
chr8 (46-113)||(14036507-14036572)
chr8 (36-123)||(34817684-34817771)
chr8 (83-144)||(18945004-18945065)
[»] chr3 (11 HSPs)
chr3 (36-158)||(8888941-8889062)
chr3 (36-125)||(8884227-8884316)
chr3 (36-125)||(3673623-3673711)
chr3 (41-125)||(3693677-3693760)
chr3 (36-123)||(10585130-10585214)
chr3 (36-123)||(3034703-3034789)
chr3 (36-125)||(8070736-8070822)
chr3 (39-123)||(631995-632079)
chr3 (36-112)||(45903524-45903598)
chr3 (166-209)||(7578657-7578700)
chr3 (166-209)||(31136872-31136915)
[»] chr7 (11 HSPs)
chr7 (36-123)||(27257280-27257365)
chr7 (36-123)||(40864345-40864432)
chr7 (36-123)||(47102594-47102681)
chr7 (36-125)||(23866782-23866868)
chr7 (36-107)||(9649909-9649980)
chr7 (51-105)||(11017047-11017101)
chr7 (83-151)||(8077030-8077098)
chr7 (36-137)||(13343376-13343477)
chr7 (36-70)||(18330338-18330372)
chr7 (51-128)||(19641346-19641421)
chr7 (86-115)||(9010415-9010444)
[»] chr5 (17 HSPs)
chr5 (36-123)||(21322985-21323070)
chr5 (36-125)||(32460493-32460582)
chr5 (36-123)||(13300434-13300519)
chr5 (36-158)||(12044080-12044201)
chr5 (36-125)||(557753-557841)
chr5 (36-123)||(31732612-31732696)
chr5 (36-116)||(41997708-41997788)
chr5 (42-125)||(36941219-36941301)
chr5 (36-116)||(42002499-42002579)
chr5 (36-125)||(562525-562611)
chr5 (36-125)||(36936459-36936547)
chr5 (36-92)||(36949777-36949833)
chr5 (36-116)||(24435128-24435204)
chr5 (161-209)||(27813776-27813824)
chr5 (36-104)||(23347857-23347925)
chr5 (39-121)||(8041210-8041286)
chr5 (258-292)||(27813906-27813940)
[»] scaffold0182 (1 HSPs)
scaffold0182 (36-158)||(8830-8951)
[»] scaffold0041 (1 HSPs)
scaffold0041 (36-123)||(34669-34754)
[»] chr4 (9 HSPs)
chr4 (37-123)||(41817846-41817930)
chr4 (36-123)||(3992717-3992802)
chr4 (39-123)||(34561468-34561550)
chr4 (36-110)||(7899902-7899973)
chr4 (36-107)||(13520934-13521005)
chr4 (43-123)||(39320625-39320703)
chr4 (36-116)||(31297474-31297553)
chr4 (164-207)||(11673492-11673535)
chr4 (166-209)||(55468968-55469011)
[»] chr1 (10 HSPs)
chr1 (37-116)||(40232337-40232415)
chr1 (36-157)||(3095115-3095234)
chr1 (40-116)||(33055849-33055923)
chr1 (38-123)||(13894310-13894395)
chr1 (36-123)||(41096899-41096982)
chr1 (166-207)||(40679192-40679233)
chr1 (59-110)||(8273126-8273177)
chr1 (170-209)||(34428499-34428538)
chr1 (166-209)||(48921002-48921045)
chr1 (41-116)||(23254159-23254236)
[»] scaffold0060 (2 HSPs)
scaffold0060 (36-123)||(51860-51945)
scaffold0060 (36-115)||(46921-46994)
[»] scaffold0061 (1 HSPs)
scaffold0061 (36-123)||(48906-48987)
[»] scaffold0017 (1 HSPs)
scaffold0017 (36-123)||(149647-149728)
[»] scaffold0070 (2 HSPs)
scaffold0070 (36-123)||(59469-59553)
scaffold0070 (36-123)||(63671-63755)
[»] scaffold0045 (1 HSPs)
scaffold0045 (36-116)||(83974-84054)
[»] scaffold0628 (2 HSPs)
scaffold0628 (41-123)||(7493-7575)
scaffold0628 (36-101)||(5747-5812)
[»] scaffold0484 (1 HSPs)
scaffold0484 (36-116)||(7983-8060)
[»] scaffold0015 (1 HSPs)
scaffold0015 (37-95)||(213319-213375)
[»] scaffold0131 (1 HSPs)
scaffold0131 (36-113)||(8622-8698)


Alignment Details
Target: chr6 (Bit Score: 380; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 260 - 828
Target Start/End: Original strand, 26268467 - 26269016
Alignment:
Q  260 tgtttgtagaaaaaagattttgaataattaaatgaaattgatgcttctaacnnnnnnncaaacagttttgccatctcgttcttaaaatccaaggaacatt 359  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||    
T  26268467 tgtttatagaaaaaagattttgaataattaaatgaaattgatgcttctaacaaaaaa-caaacagttttgccatctagttcttaaaatccaaggaacatt 26268565  T
Q  360 agcagaaaactttaaatctaaacaaaccaacatagaatcagctttcaaccataggtgagtgtaaccctttttgtgggcagttttgcatagcaagtatagc 459  Q
    ||||||| |||||||| ||||||||||||||      | || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26268566 agcagaagactttaaagctaaacaaaccaac------tgagtttccaaccataggtgagtgtaaccctttttgtgggcagttttgcatagcaagtatagc 26268659  T
Q  460 agccaaaagttcagcatgaaaggcatttacctaacctaattctgagcaaaacggccaatctagagaccatctccattcctataatgagaagaagctttgg 559  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||   || | | |           
T  26268660 agccaaaagttcagcatgaaaggcatttacctaacctaattctgagcaaaacggccgatgtagagaccatctccattcctatg--gataggca------- 26268750  T
Q  560 aagttttacttccagacatgaaaacaacataaatgatgttgttaataatgattttccaatggataggcttattttggaatcgcaattgattcattctata 659  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26268751 ----tttacttccagacatgaaaacaacataaatgatgttgttaataatgattttccaatggataggcttaatttggaatcgcaattgattcattctata 26268846  T
Q  660 ctagatagcattaatgatattcaccaagcaagatttaatgacaatcttgcactgaggtgttgtttttccaaaccatcttgtcattggtttcttcagttgg 759  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26268847 ccagatagcattaatgatattcaccaagcaagatttaatgacaatcttgcactgaggtgttgtttttccaaaccatcttgtcattggtttcttcagttgg 26268946  T
Q  760 gagagtaatttgttgagc-nnnnnnnnttaatgagagttgagagttaaggatttgtaggtttttagatgt 828  Q
    ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  26268947 gagagtaatttgttgagcaaaaaaaatttaatgagagttgagagttaaggatttgtaggtttttagatgt 26269016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 2759204 - 2759327
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga-aggtgcata 134  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||| |  ||||||||||||| |||||||| |||||||| | |||||| | |||| ||||    
T  2759204 gtgtagtgtgaattgaaaaatgtgaaagtcccacatcgaatggaacatacacattagtagtatttatataatgggggtgcacctctaatagaggtacata 2759303  T
Q  135 attaattgaacaaagtaggcacta 158  Q
    ||||  ||||| ||||| ||||||    
T  2759304 attatgtgaacgaagtaagcacta 2759327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 26268336 - 26268384
Alignment:
Q  161 tgagaatgcccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26268336 tgagaatgcccaattttagattctctatcttttgaaaaggttttggtat 26268384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 28963824 - 28963944
Alignment:
Q  41 gtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga--aggtgcataatta 138  Q
    ||||||||| ||||||||||||||||||||| | | | | | |||||||||||||||||||||||  ||||||||| ||||||||   ||| ||||||||    
T  28963824 gtgtgaatt-aaaaaagtggaagtcccacattggatgcaactcacacattagtagtgtttatatatcgggggtgtacctctaagagggggtacataatta 28963922  T
Q  139 attgaacaaagtaggcactaaa 160  Q
    |  |||| ||||| ||||||||    
T  28963923 agagaacgaagtaagcactaaa 28963944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 29157136 - 29157222
Alignment:
Q  41 gtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattag--tagtgtttatatagtgg-gggtgtatctctaag 124  Q
    |||||||||||||||| ||||||||| |||| | | ||||   |||||||||  ||||||||||||||||| ||||||| |||||||    
T  29157136 gtgtgaattgaaaaaaatggaagtcctacattggatggattagacacattagtatagtgtttatatagtggagggtgtacctctaag 29157222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30637326 - 30637187
Alignment:
Q  1 tttgtagagcagaatcgcagcatacttgtaaaatcgtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgttt 100  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||    
T  30637326 tttgtagagcagaatcgcaacttacttgtaaaatagtgtagtgtgaattgaaaaaagtggaagtcccgcatcggacggatcccacactttattagtgttt 30637227  T
Q  101 atatagtgggggtgtatctctaagaaggtgcataattaat 140  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  30637226 atatagtgggggtgtacctctaaggaggtgcataattaat 30637187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 30635917 - 30635784
Alignment:
Q  30 aaaatcgtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggt 129  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||  ||||| |||||||| ||||||| ||||    
T  30635917 aaaatagtgtagtgtgaattgaaaaaagtggaagtcccacatcggacggatcccacactttattagtgtttgaatagtaggggtgtacctctaaggaggt 30635818  T
Q  130 gcataattaattgaacaaagtaggcactaaatga 163  Q
    |||||||||| ||||| ||||| |||||||||||    
T  30635817 gcataattaagtgaaccaagtatgcactaaatga 30635784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 6296860 - 6296945
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||| ||||||||| | |||||  ||||||||||||||||||||||||||||||||| ||||||    
T  6296860 gtgtagtgtgaattgaaaaaagtggaagacccacatcggatggatc--acacattagtagtgtttatatagtgggggtgtacctctaa 6296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 10159667 - 10159754
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| ||||||||||||||||||||||||||||||||| | ||| |  ||| ||||||||||||||||||||||||||||| ||||||||    
T  10159667 gtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaac--acatattagtagtgtttatatagtgggggtgtacctctaaga 10159754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 22845516 - 22845430
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  22845516 gtgtagtgtgaattgaaaaa-gtggaagtcccgcatcggatggatctcacacatcagtagtgtttatatggtgggggtgtacctctaa 22845430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 28856231 - 28856147
Alignment:
Q  37 tgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||||||||||||||||||||||||||||||  | ||||  |||||||||||||||||||||| |||||| |||| ||||||    
T  28856231 tgtagtgtgaattgaaaaaagtggaagtcccacatcagatggat--cacacattagtagtgtttatatggtggggatgtacctctaa 28856147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 35602744 - 35602657
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||| ||||||||||||||||||||||||| ||||||| | ||| | ||||||||||||||||||||||| ||| |||||| ||||||    
T  35602744 gtgttgtgtgaattgaaaaaagtggaagtctcacatcggatggaacacacacattagtagtgtttatatattggaggtgtacctctaa 35602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 30659271 - 30659169
Alignment:
Q  52 aaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataattaattgaacaaagta 151  Q
    |||||||||||||||||||||| | ||| |    ||||||||||||||||||||||||||||||| ||||||| |||| |||| ||| |||||| |||||    
T  30659271 aaaaagtggaagtcccacatcggatggaaca---acattagtagtgtttatatagtgggggtgtacctctaag-aggtacatagttatttgaacgaagta 30659176  T
Q  152 ggcacta 158  Q
     ||||||    
T  30659175 agcacta 30659169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 17328512 - 17328443
Alignment:
Q  92 gtagtgtttatatagtgggggtgtatctctaagaaggtgcataattaattgaacaaagtaggcactaaat 161  Q
    ||||||||||||||||||| ||||  ||| |||  ||||||||||||| ||||||||||| |||||||||    
T  17328512 gtagtgtttatatagtgggtgtgttcctccaagggggtgcataattaagtgaacaaagtaagcactaaat 17328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 19588682 - 19588719
Alignment:
Q  86 acattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  19588682 acattagtagtgtttatatagtgggggtgtacctctaa 19588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 30629990 - 30629915
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggg 111  Q
    ||||||||||||||||||||| ||||||||  |||| | |  |||| | || ||||||||| ||||||||||||||    
T  30629990 gtgtagtgtgaattgaaaaaaatggaagtcttacattggatagatcacccatattagtagtttttatatagtgggg 30629915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 33527724 - 33527767
Alignment:
Q  166 atgcccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  33527724 atgcccaactttagatttactaccttttgaaaaggttttggtat 33527767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 3e-29; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 31448813 - 31448934
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataa 135  Q
    |||| ||||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||| |||| ||||     
T  31448813 gtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaag-aggtacatag 31448911  T
Q  136 ttaattgaacaaagtaggcacta 158  Q
    |||  ||||| ||||| ||||||    
T  31448912 ttatgtgaacgaagtaagcacta 31448934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 43301692 - 43301813
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataa 135  Q
    |||| |||||||||||||||||||||||||| |||||| | ||| | || ||||||||||||||||||||||||||||||| ||||||| |||| ||||     
T  43301692 gtgttgtgtgaattgaaaaaagtggaagtcctacatcggatggaacacatacattagtagtgtttatatagtgggggtgtacctctaag-aggtacatag 43301790  T
Q  136 ttaattgaacaaagtaggcacta 158  Q
    |||  ||||| ||||| ||||||    
T  43301791 ttatctgaacgaagtaagcacta 43301813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 4237290 - 4237378
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| |||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  4237290 gtgttgtgtgaattgaaaa-agtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 4237378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 4242029 - 4242117
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| |||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  4242029 gtgttgtgtgaattgaaaa-agtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 4242117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 8330329 - 8330411
Alignment:
Q  39 tagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||||||||||||||| ||||||||||||| | |||||  |||||||||||||||||||||||| |||||||| ||||||    
T  8330329 tagtgtgaattgaaaaaagtgaaagtcccacatcggatggatc--acacattagtagtgtttatatagtaggggtgtacctctaa 8330411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 25361670 - 25361747
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    |||||||||||||||||||| ||||||||||||||||| | |||||  ||||||||||||| |||||||||||||| ||||    
T  25361670 gtgtagtgtgaattgaaaaa-gtggaagtcccacatcggatggatc--acacattagtagtatttatatagtggggatgta 25361747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 37772864 - 37772777
Alignment:
Q  36 gtgtagtgtgaattgaaaaaag---tggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||    |||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||| ||||||    
T  37772864 gtgtagtgtgaattgaaaaaaaaaatggaagtcccacatcgat-ggatc--acacattagtagtgtttatatagtgggggtgtacctctaa 37772777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 21959529 - 21959473
Alignment:
Q  37 tgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtag 95  Q
    ||||||||||||||||||||||||||||| |||||| || ||||  |||||||||||||    
T  21959529 tgtagtgtgaattgaaaaaagtggaagtctcacatcaaatggat--cacacattagtag 21959473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 14036572 - 14036507
Alignment:
Q  46 aattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggt 113  Q
    |||||||||||||||||||| ||||| ||| ||||  |||| | || |||||||||||||||||||||    
T  14036572 aattgaaaaaagtggaagtctcacattgaatggat--cacatactattagtgtttatatagtgggggt 14036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 34817684 - 34817771
Alignment:
Q  36 gtgtagtgtgaattgaaaaaag--tggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||| |||||||||||   ||||||| | |||||| | |||||  |||||||||||||||||||||| |||| ||||| ||||||    
T  34817684 gtgtagtgtaaattgaaaaaaaaatggaagttctacatcggatggatc--acacattagtagtgtttatatattgggagtgtacctctaa 34817771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 18945004 - 18945065
Alignment:
Q  83 cacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataattaattgaa 144  Q
    ||||||||||||||||||||||| | ||||| || ||||||   ||||||||||||| ||||    
T  18945004 cacacattagtagtgtttatataattggggtatacctctaaaggggtgcataattaagtgaa 18945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 3e-29; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 8889062 - 8888941
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataa 135  Q
    |||| ||||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||| |||| ||||     
T  8889062 gtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaag-aggtacatag 8888964  T
Q  136 ttaattgaacaaagtaggcacta 158  Q
    |||  ||||| ||||| ||||||    
T  8888963 ttatgtgaacgaagtaagcacta 8888941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 8884316 - 8884227
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| |||||||||||||||| |||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  8884316 gtgttgtgtgaattgaaaaaaatggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 8884227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 3673711 - 3673623
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| ||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  3673711 gtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 3673623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 3693760 - 3693677
Alignment:
Q  41 gtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    ||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  3693760 gtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 3693677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 10585130 - 10585214
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||| ||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||| ||||||    
T  10585130 gtgtagtgtgaattgaaaaa-gtggaagtcccacatcggatggatc--acacattagtagtgtttatatagtgggggtgtacctctaa 10585214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 3034789 - 3034703
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||| ||||||||||||||| ||||||||||||||||| | |||   |||||||||||||||||||||||||||||||||| ||||||    
T  3034789 gtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaatacacacattagtagtgtttatatagtgggggtgtacctctaa 3034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 8070822 - 8070736
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| |||||||||||||||| |||||||||||||||| | ||| |  ||||||||||||||||||||||||||||||||| ||||||||    
T  8070822 gtgttgtgtgaattgaaaaaa-tggaagtcccacatcggatggaac--acacattagtagtgtttatatagtgggggtgtacctctaaga 8070736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 632079 - 631995
Alignment:
Q  39 tagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||||| |||||||| |||||  ||| ||| | ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  632079 tagtgtgaattaaaaaaagtagaagtttcacgtcggatggatccctcacattagtagtgtttatatagtgggggtgtacctctaa 631995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 45903524 - 45903598
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtggggg 112  Q
    ||||||||||||||||||||| |||||||| ||||||| |  |||  ||||||||||||||||||||||||||||||    
T  45903524 gtgtagtgtgaattgaaaaaattggaagtctcacatcggatagat--cacacattagtagtgtttatatagtggggg 45903598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 7578657 - 7578700
Alignment:
Q  166 atgcccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  7578657 atgcccaactttagatttactaccttttgaaaaggttttggtat 7578700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 31136872 - 31136915
Alignment:
Q  166 atgcccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  31136872 atgcccaactttagatttactaccttttgaaaaggttttggtat 31136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 4e-28; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 27257365 - 27257280
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||||||||||||  | |||||  ||||||||||||||||||||||||||||||||||||||||    
T  27257365 gtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggatc--acacattagtagtgtttatatagtgggggtgtatctctaa 27257280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 40864345 - 40864432
Alignment:
Q  36 gtgtagtgtgaattgaaaaaag--tggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||   ||||||||||| |||| | |||||  |||||||||||||||||||||||||| |||||| ||||||    
T  40864345 gtgtagtgtgaattgaaaaaaaaatggaagtcccagatcggatggatc--acacattagtagtgtttatatagtggaggtgtacctctaa 40864432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 47102681 - 47102594
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||| |||| ||||||||||||||||||||||| | || | ||| | ||||||| ||||||||||||||| |||||||||| ||||||    
T  47102681 gtgttgtgtaaattgaaaaaagtggaagtcccatagcggatggaacacacacatcagtagtgtttatatattgggggtgtacctctaa 47102594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 23866868 - 23866782
Alignment:
Q  36 gtgtagtgtgaattgaaaaaa-gtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| |||||||||||||||| ||||||||||||||| | | |||    |||||||||||||||||||||| |||||||||| ||||||||    
T  23866868 gtgttgtgtgaattgaaaaaaagtggaagtcccacattggatgga----acacattagtagtgtttatataatgggggtgtacctctaaga 23866782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 9649909 - 9649980
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagt 107  Q
    |||| |||||||||||||||||||||||| |||||||| | | |   |||||||||||||||||||||||||    
T  9649909 gtgttgtgtgaattgaaaaaagtggaagttccacatcggatgaaatacacacattagtagtgtttatatagt 9649980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 11017047 - 11017101
Alignment:
Q  51 aaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatata 105  Q
    |||||| |||||||||||||||| | ||||| |||||||||||||||||||||||    
T  11017047 aaaaaaatggaagtcccacatcggatggatcacacacattagtagtgtttatata 11017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 8077098 - 8077030
Alignment:
Q  83 cacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataattaattgaacaaagta 151  Q
    |||||||||||||| |||||||| |||||||||| |||||| | ||| ||||||||  |||||||||||    
T  8077098 cacacattagtagtatttatatattgggggtgtacctctaatagggtacataattatgtgaacaaagta 8077030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 13343376 - 13343477
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataa 135  Q
    |||| ||||||||||||||||||||| ||||| ||||| | ||| | ||| ||||| || |||||||||| | ||||||||  |||||  |||||| |||    
T  13343376 gtgttgtgtgaattgaaaaaagtggatgtcccgcatcggatggaacacacgcattaatattgtttatataattggggtgtacatctaaagaggtgcgtaa 13343475  T
Q  136 tt 137  Q
    ||    
T  13343476 tt 13343477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 18330338 - 18330372
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccaca 70  Q
    |||| ||||||||||||||||||||||||||||||    
T  18330338 gtgttgtgtgaattgaaaaaagtggaagtcccaca 18330372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 19641421 - 19641346
Alignment:
Q  51 aaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaagg 128  Q
    |||||||||||| || ||||||||| | |||  ||| ||||||||||||||||||| ||||||||  |||||| ||||    
T  19641421 aaaaaagtggaaatctcacatcgaatgaatc--acatattagtagtgtttatatagcgggggtgtgcctctaataagg 19641346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 115
Target Start/End: Complemental strand, 9010444 - 9010415
Alignment:
Q  86 acattagtagtgtttatatagtgggggtgt 115  Q
    ||||||||||||||||||||||||||||||    
T  9010444 acattagtagtgtttatatagtgggggtgt 9010415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 4e-28; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 21322985 - 21323070
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||||||||||||||||| ||||||    
T  21322985 gtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggat--cacacattagtagtgtttatatagtgggggtgtacctctaa 21323070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 32460493 - 32460582
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| |||||||||||||||||||||||| |||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  32460493 gtgttgtgtgaattgaaaaaagtggaagtaccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 32460582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 13300434 - 13300519
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||||||||||||  | ||||  |||||||||||||||||||||||||||||||||| ||||||    
T  13300434 gtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggat--cacacattagtagtgtttatatagtgggggtgtacctctaa 13300519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 12044080 - 12044201
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataa 135  Q
    |||| ||||||||||||||||||| ||||||| ||||| | ||| | ||||||||||||||||||||||||||||||||||||| |||| |||| ||||     
T  12044080 gtgttgtgtgaattgaaaaaagtgaaagtccctcatcggatggaacacacacattagtagtgtttatatagtgggggtgtatctttaag-aggtacatag 12044178  T
Q  136 ttaattgaacaaagtaggcacta 158  Q
    |||  ||||| ||||| ||||||    
T  12044179 ttatgtgaacgaagtaagcacta 12044201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 557841 - 557753
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| ||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  557841 gtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 557753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 31732696 - 31732612
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||| ||||||    
T  31732696 gtgtagtgtgaattgaaaaaaatggaagtcccacatcgat-ggatc--acacattagtagtgtttatatagtgggggtgtacctctaa 31732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 41997788 - 41997708
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    |||| ||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||| ||||||||||    
T  41997788 gtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatatattgggggtgta 41997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 36941219 - 36941301
Alignment:
Q  42 tgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    ||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  36941219 tgtgaattgaaaa-agtggaagtcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaaga 36941301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 42002579 - 42002499
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    |||| ||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||| || |||||||    
T  42002579 gtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatatattgagggtgta 42002499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 562611 - 562525
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| ||||||||||||||| ||||||||||||||||| | ||| |  ||||||||||||||||||||||||||||||||| ||||||||    
T  562611 gtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaac--acacattagtagtgtttatatagtgggggtgtacctctaaga 562525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 36936459 - 36936547
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaaga 125  Q
    |||| ||||||||||||| | ||||||||| ||||||||| ||| | ||||||||||||||||||||||||| |||||||| ||||||||    
T  36936459 gtgttgtgtgaattgaaaca-gtggaagtctcacatcgaatggaacacacacattagtagtgtttatatagtaggggtgtacctctaaga 36936547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 36949833 - 36949777
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattag 92  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  36949833 gtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcccacacattag 36949777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 24435128 - 24435204
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    ||||||||||||||||||||||  |||||| ||| ||||| |||||  |||||||||||||||||||||| ||||| ||||    
T  24435128 gtgtagtgtgaattgaaaaaag--gaagtctcacttcgaatggatc--acacattagtagtgtttatataatggggttgta 24435204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 27813776 - 27813824
Alignment:
Q  161 tgagaatgcccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    |||||||| | || |||||||||||||||||||||||||||||||||||    
T  27813776 tgagaatgtcaaactttagattctctaccttttgaaaaggttttggtat 27813824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 23347857 - 23347925
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatat 104  Q
    ||||||||||||||||||||||| |||||||||||   || ||||| ||||||||  |||| |||||||    
T  23347857 gtgtagtgtgaattgaaaaaagtagaagtcccacactaaatggatcacacacattgatagtatttatat 23347925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 8041210 - 8041286
Alignment:
Q  39 tagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctct 121  Q
    ||||||||||||||||   |||||||||||||||| | ||||| ||||||    |||||||||||||||||||| ||| ||||    
T  8041210 tagtgtgaattgaaaat--tggaagtcccacatcggatggatctcacaca----tagtgtttatatagtgggggcgtacctct 8041286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 27813906 - 27813940
Alignment:
Q  258 cttgtttgtagaaaaaagattttgaataattaaat 292  Q
    ||||||||||||||||||| |||||||||||||||    
T  27813906 cttgtttgtagaaaaaagactttgaataattaaat 27813940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 8830 - 8951
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataa 135  Q
    |||| |||||||||||||||||||||| |||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||| |||| ||||     
T  8830 gtgttgtgtgaattgaaaaaagtggaaatcccacatcggatggaacacacacattagtagtgtttatatagtgggggtgtacctctaag-aggtacatag 8928  T
Q  136 ttaattgaacaaagtaggcacta 158  Q
    |||  ||||| ||||| ||||||    
T  8929 ttatgtgaacgaagtaagcacta 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 34669 - 34754
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  ||||||||| |||||||||||||||||||||||| ||||||    
T  34669 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgtatggat--cacacattaatagtgtttatatagtgggggtgtacctctaa 34754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 4e-25; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 41817930 - 41817846
Alignment:
Q  37 tgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||| |||||||| | |||||  ||| ||||||||||||||||||||||||||||||||||||    
T  41817930 tgtagtgtgaattgaaaaaagtggaagttccacatcggatggatc--acatattagtagtgtttatatagtgggggtgtatctctaa 41817846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 3992717 - 3992802
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||| ||||||||||||||| ||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||| ||||||    
T  3992717 gtgtggtgtgaattgaaaaaggtggaagtcccacatcggatggatc--acacattagtagtgtttatatagtgggggtgtacctctaa 3992802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 34561550 - 34561468
Alignment:
Q  39 tagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||||||||||||||||||||||||| ||| | |||||  ||||||||||||| ||||||||||||||||||| ||||||    
T  34561550 tagtgtgaattgaaaaaagtggaagtcccacgtcggatggatc--acacattagtagtatttatatagtgggggtgtacctctaa 34561468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 7899902 - 7899973
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtggg 110  Q
    |||| |||||||||||||||||||||||||||||||| || ||||  ||||||||||||||||||||||||||||    
T  7899902 gtgtggtgtgaattgaaaaaagtggaagtcccacatc-aatggat--cacacattagtagtgtttatatagtggg 7899973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 13520934 - 13521005
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagt 107  Q
    |||| |||||||||||||||||||||||| |||||||| | | |   |||||||||||||||||||||||||    
T  13520934 gtgttgtgtgaattgaaaaaagtggaagttccacatcggatgaaatacacacattagtagtgtttatatagt 13521005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 39320703 - 39320625
Alignment:
Q  43 gtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||| | |||| | |  |||  |||||||||||| ||||||||||||||||||||| ||||||    
T  39320703 gtgaattgaaaaaagtggaagttctacattggatagat--cacacattagtaatgtttatatagtgggggtgtacctctaa 39320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 31297474 - 31297553
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    |||| |||||||||||||| ||||||||| | |||||| | ||| | |||||||| ||| |||||||||||||||||||||    
T  31297474 gtgttgtgtgaattgaaaa-agtggaagttctacatcggatggaacacacacatttgtaatgtttatatagtgggggtgta 31297553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 11673535 - 11673492
Alignment:
Q  164 gaatgcccaattttagattctctaccttttgaaaaggttttggt 207  Q
    |||||||||| ||||||||||  |||||||||||||||||||||    
T  11673535 gaatgcccaactttagattctgcaccttttgaaaaggttttggt 11673492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 55468968 - 55469011
Alignment:
Q  166 atgcccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  55468968 atgcccaactttagatttactaccttttgaaaaggttttggtat 55469011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 1e-22; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 40232337 - 40232415
Alignment:
Q  37 tgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||||  ||||||||||||||||||||||||||||    
T  40232337 tgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacaca-tttagtagtgtttatatagtgggggtgta 40232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 3095234 - 3095115
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaagaaggtgcataa 135  Q
    |||| ||||||||||||||| ||||||||||||||||| | | | | |||||||||||||||||||||||||||||||||| || |||| |||| ||||     
T  3095234 gtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatgaaacacacacattagtagtgtttatatagtgggggtgtacctttaag-aggtacatag 3095137  T
Q  136 ttaattgaacaaagtaggcact 157  Q
    |||  ||||||||||| |||||    
T  3095136 ttatgtgaacaaagtaagcact 3095115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 33055923 - 33055849
Alignment:
Q  40 agtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    ||||||||||||||||| |||||||||||||||| | ||||  ||||||||||||||||||||||||||| ||||||    
T  33055923 agtgtgaattgaaaaaaatggaagtcccacatcggatggat--cacacattagtagtgtttatatagtggaggtgta 33055849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 13894395 - 13894310
Alignment:
Q  38 gtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||| ||||| ||||||||||| |||| |||||||| | |||||| |||||||| ||||||||||||||| |||| ||||||||||    
T  13894395 gtagagtgaaatgaaaaaagtgaaagttccacatcggatggatcctacacattaatagtgtttatatagtaggggcgtatctctaa 13894310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 41096899 - 41096982
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||| |||||| |||||||||||||||  | ||||  ||||||||| |||||||||||||||||||||||| ||||||    
T  41096899 gtgtagtgtgaattaaaaaaa-tggaagtcccacatc-catggat--cacacattattagtgtttatatagtgggggtgtacctctaa 41096982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 40679192 - 40679233
Alignment:
Q  166 atgcccaattttagattctctaccttttgaaaaggttttggt 207  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  40679192 atgcccaactttagattttctaccttttgaaaaggttttggt 40679233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 8273126 - 8273177
Alignment:
Q  59 ggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtggg 110  Q
    ||||||||||||||| | ||| | ||||||||||||||| ||||||||||||    
T  8273126 ggaagtcccacatcggatggagcacacacattagtagtgcttatatagtggg 8273177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 34428499 - 34428538
Alignment:
Q  170 ccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  34428499 ccaactttagattttctaccttttgaaaaggttttggtat 34428538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 48921002 - 48921045
Alignment:
Q  166 atgcccaattttagattctctaccttttgaaaaggttttggtat 209  Q
    |||||||| ||||||||  |||||||||||||||||||||||||    
T  48921002 atgcccaactttagatttactaccttttgaaaaggttttggtat 48921045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 23254159 - 23254236
Alignment:
Q  41 gtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattag--tagtgtttatatagtgggggtgta 116  Q
    |||||||||||||| ||||||||||||| || | |  |||| ||||||||||  || ||||||||||||||| |||||    
T  23254159 gtgtgaattgaaaagagtggaagtcccaaattggatagatcacacacattagtataatgtttatatagtgggtgtgta 23254236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 53; Significance: 6e-21; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 51860 - 51945
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||||| ||| ||| | |||||  |||||||||||||||||||||||| |||||||| ||||||    
T  51860 gtgtagtgtgaattgaaaaaagtggaagtcacacgtcggatggatc--acacattagtagtgtttatatagtaggggtgtacctctaa 51945  T

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Target: scaffold0060; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 46921 - 46994
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgt 115  Q
    |||||||||||||||||||||||||||||||||||||| | |||      |||||||||||||||||||||| |||||||    
T  46921 gtgtagtgtgaattgaaaaaagtggaagtcccacatcggatgga------acattagtagtgtttatatagtaggggtgt 46994  T

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Target: scaffold0061 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 48906 - 48987
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||||||    |||||||||||||||||    
T  48906 gtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggat--cacacattagtagtgtttat----tgggggtgtatctctaa 48987  T

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Target: scaffold0017 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 149728 - 149647
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||||||    |||||||||||||||||    
T  149728 gtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggat--cacacattagtagtgtttat----tgggggtgtatctctaa 149647  T

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Target: scaffold0070 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 59553 - 59469
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||| |||||| |||||||||| | |||||  ||||||||||| ||||||||||||||||||||| ||||||    
T  59553 gtgtagtgtgaattgaaaaa-gtggaaatcccacatcggatggatc--acacattagtaatgtttatatagtgggggtgtacctctaa 59469  T

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Target: scaffold0070; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 63755 - 63671
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    |||||||||||||||||||| |||||| |||||||||| | |||||  ||||||||||| ||||||||||||||||||||| ||||||    
T  63755 gtgtagtgtgaattgaaaaa-gtggaaatcccacatcggatggatc--acacattagtaatgtttatatagtgggggtgtacctctaa 63671  T

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Target: scaffold0045 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 84054 - 83974
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    |||| |||||||||||||| |||| |||||| |||| ||| ||| | ||||||||||||||||||||||||||| ||||||    
T  84054 gtgttgtgtgaattgaaaagagtgaaagtcctacattgaatggaacacacacattagtagtgtttatatagtggaggtgta 83974  T

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Target: scaffold0628 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 7575 - 7493
Alignment:
Q  41 gtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgtatctctaa 123  Q
    ||||||||| ||||||||||||||||||||||| | ||| | |||||| ||| ||||||||||| |||||| |||| ||||||    
T  7575 gtgtgaatttaaaaaagtggaagtcccacatcggatggaacacacacaatagaagtgtttatatcgtggggttgtacctctaa 7493  T

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Target: scaffold0628; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 5812 - 5747
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgttta 101  Q
    |||| |||||||||||||||| || |||||||||||| || ||| | ||||| |||||||||||||    
T  5812 gtgttgtgtgaattgaaaaaaatgaaagtcccacatcaaatggaacacacactttagtagtgttta 5747  T

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Target: scaffold0484 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 8060 - 7983
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggtgta 116  Q
    |||||||| ||||||||||| ||||||||||||||||| | ||||  ||||||||||| || |||||||||||||| ||||    
T  8060 gtgtagtgagaattgaaaaa-gtggaagtcccacatcggatggat--cacacattagtggtatttatatagtggggatgta 7983  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 213319 - 213375
Alignment:
Q  37 tgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtag 95  Q
    ||||||||||||||||||||||||||||| |||||| || ||||  |||||||||||||    
T  213319 tgtagtgtgaattgaaaaaagtggaagtctcacatcaaatggat--cacacattagtag 213375  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 8698 - 8622
Alignment:
Q  36 gtgtagtgtgaattgaaaaaagtggaagtcccacatcgaacggatcccacacattagtagtgtttatatagtgggggt 113  Q
    |||| ||||||||||||||||||||||||| ||||| | |   ||| |||||| ||||| |||||||||| |||||||    
T  8698 gtgttgtgtgaattgaaaaaagtggaagtctcacattgtataaatcacacaca-tagtaatgtttatataatgggggt 8622  T

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