View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2848_low_35 (Length: 355)
Name: NF2848_low_35
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2848_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 19 - 350
Target Start/End: Original strand, 43860623 - 43860954
Alignment:
| Q |
19 |
gtaagtacttcccaatttggtttattcttaaactgtaataaaaaatatgaatgaatcaatatgatgctacatgcataaatatgtatagactcgtctctag |
118 |
Q |
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| T |
43860623 |
gtaagcacttcccaatttggtttattcttaaactgtaataaaaaatatgaatgaatcaatatgatgctacatgcataaatatgtatagactcgtctctag |
43860722 |
T |
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| Q |
119 |
ctagcttgataaattactaacagcatctctagtagccaatgtgagtatatcagcacatgaaacaattcctggacatttttcctccaaagcttcttttatg |
218 |
Q |
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| T |
43860723 |
ctagcttgataaattactaacagcatctctagtagccaatgtgagtatatcagcacatgaaacaattcctggacatttttcctccaaagcttcttttatg |
43860822 |
T |
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| Q |
219 |
tcttctattacatcaaagcctgctaatgataaattaggaatggcatccttctccgccgtgttaccagcagtggactccaacaaaaccgatgcgtcacacc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860823 |
tcttctattacatcaaagcctgctaatgataaattaggaatggcatccttctccgccgtgttaccagcagtggactccaacaaaaccgatgcgtcacacc |
43860922 |
T |
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| Q |
319 |
cctgaaacgcaaccatagatattcatctcact |
350 |
Q |
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|||||||||||||||||||||| ||| ||||| |
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| T |
43860923 |
cctgaaacgcaaccatagatatgcatgtcact |
43860954 |
T |
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