View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2848_low_71 (Length: 252)
Name: NF2848_low_71
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2848_low_71 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 30357117 - 30357336
Alignment:
| Q |
12 |
ataggactaaactgaaatttaaaactagttaagatatgttaactaaaattagtttggccaaatatcaatcatcagtggcttcttattgaacgttaatgcc |
111 |
Q |
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| T |
30357117 |
ataggactaaactgaaatttaaaactagttaagatatgttaactaaaattagtttggccaaatatcaatcatcagtggcttcttattgaacgttaatgcc |
30357216 |
T |
|
| Q |
112 |
ttattaatcaaaccaacctacataatgaacatgnnnnnnnnnnnnaacgtgacaacatatataccaattgaaatcttaatctataa-caaagagagtgag |
210 |
Q |
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|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || |
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| T |
30357217 |
ttattactcaaacaaacctacataatgaacatg--tatatatataaacgtgacaacatatataccaattgaaatcttaatctataagcaaaga----gaa |
30357310 |
T |
|
| Q |
211 |
tatacataggtaataggaggacgtgg |
236 |
Q |
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|||||||| |||||||||||| |||| |
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| T |
30357311 |
tatacataagtaataggaggaagtgg |
30357336 |
T |
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