View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2848_low_83 (Length: 238)

Name: NF2848_low_83
Description: NF2848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2848_low_83
NF2848_low_83
[»] chr7 (36 HSPs)
chr7 (3-224)||(38452029-38452249)
chr7 (139-224)||(42493701-42493787)
chr7 (114-220)||(47507578-47507684)
chr7 (141-222)||(8170026-8170107)
chr7 (150-224)||(48137787-48137861)
chr7 (144-224)||(5248093-5248173)
chr7 (115-224)||(37352439-37352548)
chr7 (140-224)||(2741167-2741251)
chr7 (142-224)||(30412948-30413030)
chr7 (113-217)||(17157804-17157909)
chr7 (114-224)||(36015033-36015143)
chr7 (140-217)||(8920738-8920815)
chr7 (139-217)||(7596181-7596260)
chr7 (141-224)||(15034826-15034909)
chr7 (141-217)||(33887887-33887963)
chr7 (111-194)||(45375404-45375488)
chr7 (114-224)||(2964016-2964127)
chr7 (141-219)||(1360531-1360609)
chr7 (112-224)||(27986685-27986792)
chr7 (124-220)||(35754022-35754118)
chr7 (139-214)||(5248671-5248746)
chr7 (141-219)||(10031954-10032032)
chr7 (137-183)||(47305589-47305635)
chr7 (185-224)||(11678038-11678077)
chr7 (141-224)||(16878702-16878785)
chr7 (111-217)||(32829091-32829198)
chr7 (113-219)||(28770444-28770550)
chr7 (166-224)||(35567134-35567192)
chr7 (146-224)||(36061530-36061608)
chr7 (143-224)||(44391456-44391537)
chr7 (146-224)||(44495216-44495294)
chr7 (115-200)||(45030718-45030801)
chr7 (114-202)||(6388003-6388091)
chr7 (163-215)||(19620009-19620061)
chr7 (141-224)||(31477087-31477171)
chr7 (139-219)||(34681685-34681765)
[»] chr1 (50 HSPs)
chr1 (114-224)||(45584507-45584617)
chr1 (139-224)||(4039630-4039715)
chr1 (139-224)||(40203106-40203191)
chr1 (113-220)||(34445636-34445743)
chr1 (141-217)||(25095604-25095680)
chr1 (120-224)||(31745435-31745539)
chr1 (142-224)||(31652619-31652700)
chr1 (109-219)||(40377005-40377115)
chr1 (140-224)||(50974602-50974686)
chr1 (141-224)||(45753445-45753528)
chr1 (140-224)||(5115634-5115718)
chr1 (141-224)||(5787470-5787552)
chr1 (140-223)||(5851529-5851612)
chr1 (141-219)||(7549838-7549916)
chr1 (139-224)||(36393477-36393562)
chr1 (146-224)||(12636336-12636414)
chr1 (141-224)||(25302067-25302150)
chr1 (147-221)||(34596151-34596223)
chr1 (110-224)||(48947168-48947282)
chr1 (105-202)||(34861262-34861359)
chr1 (141-224)||(44719176-44719259)
chr1 (163-217)||(2351400-2351454)
chr1 (109-219)||(16113882-16113992)
chr1 (142-215)||(50875699-50875773)
chr1 (144-217)||(28171517-28171590)
chr1 (144-217)||(38570389-38570462)
chr1 (139-214)||(43492166-43492242)
chr1 (146-217)||(52757398-52757470)
chr1 (144-219)||(31042999-31043074)
chr1 (142-224)||(12148327-12148409)
chr1 (140-217)||(33744170-33744247)
chr1 (114-217)||(4521043-4521144)
chr1 (120-224)||(4771996-4772100)
chr1 (139-211)||(6983031-6983103)
chr1 (141-209)||(13954173-13954241)
chr1 (139-219)||(35259079-35259159)
chr1 (152-219)||(703445-703512)
chr1 (167-224)||(25871379-25871437)
chr1 (139-217)||(36321660-36321738)
chr1 (146-220)||(39241438-39241512)
chr1 (171-217)||(45584744-45584790)
chr1 (114-215)||(3047835-3047936)
chr1 (139-215)||(7750423-7750500)
chr1 (139-212)||(19547089-19547162)
chr1 (167-224)||(28672316-28672373)
chr1 (163-212)||(46895949-46895998)
chr1 (171-224)||(50222635-50222688)
chr1 (142-217)||(3338061-3338137)
chr1 (141-205)||(29525094-29525157)
chr1 (124-224)||(46803493-46803593)
[»] chr4 (44 HSPs)
chr4 (111-224)||(44646553-44646666)
chr4 (139-224)||(49446621-49446707)
chr4 (139-224)||(44647909-44647994)
chr4 (110-217)||(40480205-40480312)
chr4 (114-224)||(6316834-6316944)
chr4 (139-217)||(31871090-31871168)
chr4 (111-224)||(33982390-33982503)
chr4 (139-214)||(53919861-53919936)
chr4 (139-217)||(39727589-39727666)
chr4 (115-217)||(41468053-41468155)
chr4 (157-223)||(50115058-50115124)
chr4 (114-205)||(28165360-28165452)
chr4 (153-224)||(9802644-9802715)
chr4 (141-224)||(42844038-42844121)
chr4 (139-224)||(24395224-24395310)
chr4 (139-224)||(12103868-12103953)
chr4 (119-220)||(25196109-25196210)
chr4 (139-219)||(20390018-20390098)
chr4 (139-219)||(53737827-53737907)
chr4 (158-217)||(1696223-1696282)
chr4 (153-224)||(42197042-42197113)
chr4 (139-217)||(7627952-7628030)
chr4 (140-217)||(12329286-12329364)
chr4 (158-224)||(49144775-49144841)
chr4 (139-224)||(27346291-27346376)
chr4 (113-202)||(30978698-30978787)
chr4 (159-224)||(32806495-32806560)
chr4 (146-217)||(18089617-18089689)
chr4 (109-215)||(23230272-23230379)
chr4 (139-217)||(23016257-23016335)
chr4 (139-217)||(35180640-35180718)
chr4 (146-223)||(51230097-51230174)
chr4 (144-217)||(54543568-54543641)
chr4 (111-202)||(28695731-28695822)
chr4 (158-217)||(34235924-34235984)
chr4 (142-217)||(40666965-40667041)
chr4 (140-224)||(41370196-41370280)
chr4 (140-224)||(44504084-44504168)
chr4 (141-202)||(33559169-33559231)
chr4 (141-215)||(37179686-37179760)
chr4 (139-224)||(38494786-38494869)
chr4 (140-216)||(39827184-39827261)
chr4 (168-224)||(42956999-42957053)
chr4 (165-217)||(19597185-19597237)
[»] chr5 (40 HSPs)
chr5 (111-215)||(8247032-8247136)
chr5 (114-224)||(35395155-35395266)
chr5 (110-224)||(3263711-3263825)
chr5 (114-224)||(28793303-28793413)
chr5 (144-224)||(5356326-5356406)
chr5 (120-215)||(10051704-10051799)
chr5 (139-224)||(22473427-22473513)
chr5 (139-217)||(27016664-27016742)
chr5 (139-230)||(19692716-19692809)
chr5 (109-217)||(31672374-31672483)
chr5 (158-217)||(14475035-14475094)
chr5 (142-224)||(31889611-31889694)
chr5 (141-221)||(142386-142465)
chr5 (140-224)||(21582366-21582450)
chr5 (146-220)||(26663635-26663709)
chr5 (146-220)||(26935230-26935304)
chr5 (141-213)||(8761922-8761994)
chr5 (141-193)||(22871915-22871967)
chr5 (142-202)||(37976444-37976504)
chr5 (141-204)||(4725892-4725954)
chr5 (142-224)||(14042459-14042541)
chr5 (120-201)||(1354399-1354479)
chr5 (142-219)||(12448667-12448744)
chr5 (168-224)||(24241040-24241096)
chr5 (141-201)||(27650859-27650919)
chr5 (137-208)||(4641494-4641564)
chr5 (141-224)||(12933328-12933411)
chr5 (141-224)||(12947547-12947630)
chr5 (114-201)||(34032141-34032228)
chr5 (136-202)||(1031707-1031773)
chr5 (142-200)||(2816174-2816232)
chr5 (142-224)||(24241185-24241267)
chr5 (140-214)||(42265430-42265504)
chr5 (114-180)||(43145811-43145877)
chr5 (141-214)||(591262-591335)
chr5 (109-214)||(13978670-13978775)
chr5 (139-224)||(16161412-16161497)
chr5 (139-216)||(32017454-32017531)
chr5 (160-201)||(32691421-32691462)
chr5 (139-219)||(779079-779158)
[»] chr3 (32 HSPs)
chr3 (114-225)||(38704977-38705088)
chr3 (139-219)||(18399192-18399273)
chr3 (114-224)||(34758897-34759007)
chr3 (137-224)||(52340149-52340237)
chr3 (140-224)||(54912026-54912110)
chr3 (122-217)||(41571602-41571698)
chr3 (141-224)||(25548226-25548310)
chr3 (139-217)||(1511327-1511406)
chr3 (139-217)||(30463992-30464070)
chr3 (115-217)||(38094427-38094529)
chr3 (130-224)||(38388696-38388790)
chr3 (111-224)||(30687107-30687220)
chr3 (140-224)||(4033025-4033108)
chr3 (158-217)||(53433221-53433280)
chr3 (146-224)||(55110027-55110105)
chr3 (123-200)||(2831524-2831601)
chr3 (148-224)||(7754798-7754875)
chr3 (141-224)||(27968193-27968276)
chr3 (166-224)||(19898130-19898188)
chr3 (145-219)||(43749507-43749581)
chr3 (141-217)||(28434506-28434581)
chr3 (141-200)||(37775370-37775429)
chr3 (141-180)||(37775461-37775500)
chr3 (144-194)||(1680516-1680566)
chr3 (151-224)||(21490630-21490704)
chr3 (167-217)||(40546348-40546398)
chr3 (141-219)||(53040464-53040542)
chr3 (114-217)||(779710-779812)
chr3 (139-217)||(29099168-29099247)
chr3 (142-217)||(48322241-48322316)
chr3 (140-214)||(52299036-52299110)
chr3 (167-224)||(52309189-52309246)
[»] chr2 (37 HSPs)
chr2 (115-224)||(20683025-20683134)
chr2 (141-224)||(4238353-4238436)
chr2 (141-221)||(18053048-18053128)
chr2 (110-224)||(44941109-44941222)
chr2 (120-217)||(6761761-6761858)
chr2 (139-224)||(8773701-8773786)
chr2 (120-224)||(34546296-34546400)
chr2 (141-224)||(8789851-8789934)
chr2 (144-224)||(35228732-35228812)
chr2 (114-224)||(2825984-2826094)
chr2 (113-217)||(42966923-42967028)
chr2 (137-224)||(42945042-42945129)
chr2 (114-224)||(24765303-24765413)
chr2 (139-202)||(12075572-12075635)
chr2 (141-211)||(433551-433621)
chr2 (144-194)||(2393098-2393148)
chr2 (114-224)||(3882584-3882694)
chr2 (141-215)||(16572013-16572087)
chr2 (114-217)||(5961998-5962103)
chr2 (140-224)||(8964386-8964470)
chr2 (111-217)||(2769280-2769386)
chr2 (145-224)||(9153502-9153581)
chr2 (141-224)||(31448316-31448399)
chr2 (141-200)||(33275945-33276004)
chr2 (141-224)||(7271771-7271858)
chr2 (143-212)||(43461009-43461079)
chr2 (166-215)||(6334709-6334758)
chr2 (138-224)||(26408369-26408457)
chr2 (140-217)||(42924452-42924529)
chr2 (120-219)||(14102332-14102432)
chr2 (140-194)||(3199546-3199600)
chr2 (170-224)||(11278757-11278811)
chr2 (114-220)||(31513721-31513826)
chr2 (153-217)||(4616846-4616909)
chr2 (141-217)||(13197246-13197321)
chr2 (142-214)||(18375058-18375130)
chr2 (114-174)||(43745592-43745652)
[»] chr8 (33 HSPs)
chr8 (139-224)||(45368751-45368836)
chr8 (137-224)||(31206301-31206388)
chr8 (142-220)||(5020084-5020162)
chr8 (146-224)||(38956884-38956962)
chr8 (141-224)||(5217786-5217867)
chr8 (141-217)||(42760182-42760258)
chr8 (121-216)||(24103087-24103182)
chr8 (141-217)||(33636713-33636789)
chr8 (113-216)||(30534985-30535088)
chr8 (139-200)||(7044383-7044444)
chr8 (146-210)||(22600999-22601064)
chr8 (140-217)||(27633496-27633572)
chr8 (114-214)||(34336511-34336610)
chr8 (141-224)||(28313565-28313647)
chr8 (140-210)||(7691353-7691423)
chr8 (110-200)||(39932729-39932819)
chr8 (140-224)||(10335050-10335135)
chr8 (134-182)||(36819752-36819800)
chr8 (120-224)||(39691142-39691246)
chr8 (120-219)||(1876515-1876614)
chr8 (137-220)||(27055901-27055984)
chr8 (120-219)||(37564365-37564464)
chr8 (158-214)||(40380172-40380230)
chr8 (178-224)||(9632961-9633007)
chr8 (143-224)||(20169746-20169827)
chr8 (114-200)||(20279607-20279693)
chr8 (114-200)||(21066234-21066320)
chr8 (112-202)||(35592406-35592495)
chr8 (163-200)||(6270335-6270372)
chr8 (139-224)||(12002260-12002345)
chr8 (141-224)||(7931709-7931793)
chr8 (163-219)||(32271187-32271243)
chr8 (120-224)||(41385239-41385343)
[»] scaffold0246 (1 HSPs)
scaffold0246 (110-217)||(18144-18251)
[»] chr6 (17 HSPs)
chr6 (142-224)||(12307821-12307903)
chr6 (120-182)||(22696006-22696068)
chr6 (139-224)||(12383046-12383131)
chr6 (139-224)||(31702768-31702853)
chr6 (139-217)||(7465470-7465548)
chr6 (144-224)||(8176324-8176404)
chr6 (148-224)||(6546747-6546823)
chr6 (185-224)||(22695510-22695549)
chr6 (166-217)||(24616292-24616343)
chr6 (139-220)||(6048302-6048383)
chr6 (137-217)||(11675628-11675711)
chr6 (114-214)||(29407971-29408071)
chr6 (145-224)||(35241410-35241490)
chr6 (139-194)||(16442073-16442128)
chr6 (139-224)||(26311802-26311888)
chr6 (146-217)||(27843241-27843313)
chr6 (141-217)||(30509311-30509387)
[»] scaffold0221 (1 HSPs)
scaffold0221 (163-217)||(1924-1978)
[»] scaffold0007 (1 HSPs)
scaffold0007 (141-198)||(194516-194572)
[»] scaffold0717 (1 HSPs)
scaffold0717 (114-182)||(5031-5099)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 38452029 - 38452249
Alignment:
Q  3 aaaaaattaaattgttgccgaaagagatgttcactttattatgtctagccatgtcttgaatgataactcca-tgagaatatatgaggaataaaaatgaca 101  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38452029 aaaaaatcaaattgttgccgaaagagatgttcacttt-ttatgtctagccatctcttgaatgataactccaatgagaatatatgaggaataaaaatgaca 38452127  T
Q  102 atgaaagaatatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttc 201  Q
    |||||||||||||| |||||||||||| |||| | ||  || ||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  38452128 atgaaagaatatggatcatgttaacgagtgcccccgaa-cattctttaaggatttaaaaagaagaaattattttataaaaaagtcaaatatttcaatttc 38452226  T
Q  202 cgatgcattgattacacatattt 224  Q
    |||||||||| ||||||||||||    
T  38452227 cgatgcattggttacacatattt 38452249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 42493701 - 42493787
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattatttt-ataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||| |||||||||||||||||||||||    
T  42493701 ggcactctttaaggattccaaaagaagaaattattttgataaaaaagtcaaatattttgattttcgatgcattgattacacatattt 42493787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 47507578 - 47507684
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| || ||| | |||||||||||||||||| |||||||||||| ||||||||||||  ||||| |||||||||||||||| ||||||    
T  47507578 gggtcttgttaacgagtgtctccggggcactctttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtattgat 47507677  T
Q  214 tacacat 220  Q
    |||||||    
T  47507678 tacacat 47507684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 8170026 - 8170107
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatat 222  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||| ||||||    
T  8170026 cactctttaaggattccaaaagaagaaattattttataaaaaagtcaaatattttgatttccgatacattgattatacatat 8170107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 48137787 - 48137861
Alignment:
Q  150 aggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||    
T  48137787 aggattccaaaagaagaaattattttataaaaaagtcaaatattttgattttcgatgcattgattacacatattt 48137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 5248093 - 5248173
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||   ||||||||||||||||||||||    
T  5248093 tctttaaggatttcaaaagaagaaattattttataaaaaagtcaaatatttcgattattgatgcattgattacacatattt 5248173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 37352548 - 37352439
Alignment:
Q  115 ggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    ||||||||||| || |||||| ||| || ||||||||||||| |||| |||||||||||  || |||| ||||||||||||||||||| ||||||| |||    
T  37352548 ggtcatgttaatgagtgcctccgagacattctttaaggattcaaaaacaagaaattattccattaaaaagtcaaatatttcaatttccaatgcattaatt 37352449  T
Q  215 acacatattt 224  Q
    ||||| ||||    
T  37352448 acacaaattt 37352439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 2741167 - 2741251
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||  ||||||| |||||||||||| ||||  ||||||||||  ||||||||||||||||||||||||||||    
T  2741167 gcactctttaaggattttaaaagaaaaaattattttattaaaaaatcaaatattttgatttccgatgcattgattacacatattt 2741251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 30413030 - 30412948
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||| |||||||||||| |||||||| | || |||||||||||| ||| ||||||||||||||| ||||||||    
T  30413030 actctttaaggatttcaaaagaagaaactattttatgataaagtcaaatatttcgattcccgatgcattgattatacatattt 30412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 17157909 - 17157804
Alignment:
Q  113 tgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattg 211  Q
    |||||| ||||||||| ||||  || ||||||||||||| |||||||||| ||||||||||  || ||||| ||||||| ||||||||||| ||||||||    
T  17157909 tgggtcttgttaacgagtgcccttggggcactctttaagcattccaaaaggagaaattattccataaaaaaagtcaaatgtttcaatttccaatgcattg 17157810  T
Q  212 attaca 217  Q
    ||||||    
T  17157809 attaca 17157804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 36015143 - 36015033
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| |||||||||||| ||| | | || |||||||||||| ||||| ||||||||||||||||||||  |||||||| ||||||| | ||  ||||||    
T  36015143 gggtcttgttaacgaatgtctccgggacattctttaaggatttcaaaaaaagaaattattttataaaaaaatcaaatatgtcaattttcaatttattgat 36015044  T
Q  214 tacacatattt 224  Q
    ||||| |||||    
T  36015043 tacacgtattt 36015033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 8920815 - 8920738
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||| |||||||||| ||||||||||  ||| ||| ||||||| ||||||||||| ||||||||||||||    
T  8920815 gcactctttaagcattccaaaaggagaaattattccatagaaaagtcaaatgtttcaatttccaatgcattgattaca 8920738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 7596260 - 7596181
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaa-tgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||| |||  ||||||||||||||||| |||||||  |||||| |||||||||||| ||||||||||||||    
T  7596260 ggcactctttaagcattttaaaagaagaaattatttcataaaaagagtcaaaaatttcaatttccaatgcattgattaca 7596181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 15034909 - 15034826
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgca-ttgattacacatattt 224  Q
    ||||||||||||||||||| | |||||| ||||||||||||| |||||||||||| || ||| ||||| |||||||||| |||||    
T  15034909 cactctttaaggattccaagaaaagaaaatattttataaaaa-gtcaaatatttcgatatccaatgcatttgattacacgtattt 15034826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 33887963 - 33887887
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||| ||||||||| ||  ||||||| | |||||| ||||||||||||||||| | ||||||||||||||    
T  33887963 cactctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattaca 33887887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 45375488 - 45375404
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaa-ttattttataaaaatgtcaaatattt 194  Q
    |||||||| | ||||||| |||||| | |||||||||||||||||| ||||||||||| |||| ||||||||| || ||||||||    
T  45375488 tatgggtcttattaacgagtgcctccggggcactctttaaggattctaaaagaagaaacttatgttataaaaaagttaaatattt 45375404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 2964016 - 2964127
Alignment:
Q  114 gggtcatgttaacgaatgcctc-tgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattga 212  Q
    ||||| |||||||||||| ||| ||| |||   ||||| ||||| |||||||||||||||||||||||||  | ||| ||||  |||| |||| ||||||    
T  2964016 gggtcttgttaacgaatgtctcctgacgcatattttaaagattctaaaagaagaaattattttataaaaaaattaaaaattttgattttcgatacattga 2964115  T
Q  213 ttacacatattt 224  Q
    ||||||||||||    
T  2964116 ttacacatattt 2964127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 1360531 - 1360609
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||||| |||||||||  || ||||||||| |||||| || |||| |||| |||||| ||||||||||||||||    
T  1360531 cactctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattgattacaca 1360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 27986792 - 27986685
Alignment:
Q  112 atgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattg 211  Q
    ||||||||||||||||| || | ||||| ||||||||||  |||||||||||||| ||| ||  ||||||  || ||||||||||||  |||||||||||    
T  27986792 atgggtcatgttaacgagtgtc-ctgagacactctttaaacattccaaaagaagatatttttacataaaa--gttaaatatttcaat--ccgatgcattg 27986698  T
Q  212 attacacatattt 224  Q
    |||||| ||||||    
T  27986697 attacatatattt 27986685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 35754022 - 35754118
Alignment:
Q  124 aacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacat 220  Q
    ||||| || ||||||  ||||||||||| ||| ||||| |||||||||||||||||||   |||| |||||| |||| | ||||||| |||||||||    
T  35754022 aacgagtgtctctgaaacactctttaagaatttcaaaaaaagaaattattttataaaataatcaagtatttcgattttcaatgcattaattacacat 35754118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 5248746 - 5248671
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    ||||||||||||||||||| ||  ||||||||||| | ||||||||| ||| | | |||||||| |||||||||||    
T  5248746 ggcactctttaaggattcctaataaagaaattattctttaaaaatgttaaaaactccaatttccaatgcattgatt 5248671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 10032032 - 10031954
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||||| |||||||||  || ||||||||| | |||| || |||| |||| |||||| ||||||||||||||||    
T  10032032 cactctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgattacaca 10031954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 47305635 - 47305589
Alignment:
Q  137 gaggcactctttaaggattccaaaagaagaaattattttataaaaat 183  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||    
T  47305635 gaggtactctttaaggatttcaaaagaagaaattatttcataaaaat 47305589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 11678038 - 11678077
Alignment:
Q  185 tcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  11678038 tcaaatatttcaatttccgatgcattaattacacgtattt 11678077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 16878702 - 16878785
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||| ||||| | ||  ||||||||||| ||||||| || ||||||||| |||  | |||||||||||||| ||||||    
T  16878702 cactctttaaagattcaataaagagaaattatttcataaaaaagttaaatatttcgattctcaatgcattgattacaaatattt 16878785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 32829091 - 32829198
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatg-tcaaatatttcaatttccgatgcat 209  Q
    |||||||| ||||||||| ||   ||| |||| |||||||| |||||||||| ||||||||||  |||||||   |||||| |||||||| || || |||    
T  32829091 tatgggtcttgttaacgagtgttcctggggcattctttaagcattccaaaaggagaaattattccataaaaaaaatcaaatgtttcaattcccaatacat 32829190  T
Q  210 tgattaca 217  Q
    ||||||||    
T  32829191 tgattaca 32829198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 28770444 - 28770550
Alignment:
Q  113 tgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattga 212  Q
    |||||| ||||||||| |||||| | ||||||||||||| || ||||||  || ||||||| | |  ||| ||||| |||| |||||||| ||||||| |    
T  28770444 tgggtcttgttaacgagtgcctccggggcactctttaagcatcccaaaattagtaattattcttttgaaaagtcaactattacaatttccaatgcattca 28770543  T
Q  213 ttacaca 219  Q
     ||||||    
T  28770544 atacaca 28770550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 35567134 - 35567192
Alignment:
Q  166 aaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||| |||||| ||||||||||| ||||||| || |||| | |||||||||||    
T  35567134 aaattattttttaaaaaagtcaaatattttaatttccaatacattaaatacacatattt 35567192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 36061608 - 36061530
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||| |||  ||||||||||||  |||||| |||||||| | | |||||| ||||||||| |||||| ||||    
T  36061608 tttaaggattctaaagcaagaaattatttattaaaaaagtcaaatactactatttccaatgcattgaatacacaaattt 36061530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 44391537 - 44391456
Alignment:
Q  143 ctctttaaggattccaaaagaagaaattattttataaaaatgtc-aaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||| ||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||   |||||||||||| | ||||||    
T  44391537 ctctttaaagattctaaaagaataaattattttataaaaa-gtcaaaatatttcgatttttaatgcattgattatatatattt 44391456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 44495216 - 44495294
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||| ||| |||| ||||| |||||||||||||||  | ||||||||| ||||   || ||||||||||||||||||    
T  44495216 tttaagaatttcaaatgaagatattattttataaaaaatttaaatatttcgatttttaattcattgattacacatattt 44495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 45030718 - 45030801
Alignment:
Q  115 ggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    |||| ||||||||| ||| |||||| || | ||||||| || |||||||||||||||||| |||||||  ||||||||| ||||||    
T  45030718 ggtcttgttaacgagtgc-tctgagacattttttaagggtttcaaaagaagaaattatttcataaaaa-atcaaatattacaattt 45030801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 6388091 - 6388003
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    ||||| ||||||| | ||||| | || ||||||||||||||||  ||  ||||||||||| | |||||| |||||| | ||||||||||    
T  6388091 gggtcttgttaacaagtgcctttaagacactctttaaggattcataataaagaaattattctttaaaaaagtcaaaaacttcaatttcc 6388003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 19620009 - 19620061
Alignment:
Q  163 aagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatta 215  Q
    ||||||||||| | |||||||||||||  ||||||||||| ||||| ||||||    
T  19620009 aagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgatta 19620061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 31477087 - 31477171
Alignment:
Q  141 cactctttaaggattccaaaagaa-gaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| ||||||||||| |||| || ||||||||| |||||||| |||||| |  |  |||| | |||||||||||||||||||||    
T  31477087 cactatttaaggattctaaaaaaaagaaattattgtataaaaacgtcaaaaaaattgattttcaatgcattgattacacatattt 31477171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 34681685 - 34681765
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    |||| |||||||| |||| |||  | ||||||||||| || ||| |||||||| |||||||||| ||||||| | ||||||    
T  34681685 ggcagtctttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcattaaatacaca 34681765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 45584507 - 45584617
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||| ||||||    
T  45584507 gggtcttgttaacgaatgcccccggggcactctttaaggattccaaaagaagaaattattttataaaaaagttaaatattttaatttctgatgtattgat 45584606  T
Q  214 tacacatattt 224  Q
    |||||||||||    
T  45584607 tacacatattt 45584617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 4039715 - 4039630
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||    
T  4039715 ggcactctttaaggattccaaaagaataaattattttataaaaaagtcaaatatttcgatttccaatgcattgattacatatattt 4039630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 40203191 - 40203106
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  40203191 ggcactctttaaggattacaaaacaagaaattatttcataaaaaagtcaaatatttcaatttccaatgcattgattacacatattt 40203106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 34445636 - 34445743
Alignment:
Q  113 tgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattga 212  Q
    |||||| ||||||||| |||| | |  |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||    
T  34445636 tgggtcttgttaacgagtgcccccggagcactctttaaggattccaaaagaagaaattaatttataaaaaagtcaaatatttcgatttccaatgcattga 34445735  T
Q  213 ttacacat 220  Q
    ||| ||||    
T  34445736 ttagacat 34445743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 25095604 - 25095680
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  25095604 cactctttaaggattctaaaagaagaaattatttcataaaaaagtcaaatatttcaattttcgatgcattgattaca 25095680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 31745539 - 31745435
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||| | |||||| |||||||||||||| ||||| ||||||| |||||||||||||| || |||||||||||| |||  ||||||||||||||||||    
T  31745539 tgttaactagtgcctccgaggcactctttaaagattctaaaagaataaattattttataataaagtcaaatatttcgattctcgatgcattgattacaca 31745440  T
Q  220 tattt 224  Q
    |||||    
T  31745439 tattt 31745435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 31652619 - 31652700
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  31652619 actctttaaggatttcaaaa-aagaaattattttataaaaaagtcaaatattttaatttccgatgcaatgattacacatattt 31652700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 40377005 - 40377115
Alignment:
Q  109 aatatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgca 208  Q
    |||| ||||| ||||||||| |||| ||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  ||| || || ||    
T  40377005 aataagggtcttgttaacgagtgccccttgggcactctttaaggattccaaaagaagaaataattttataaaaaagtcaaatattttgattcccaattca 40377104  T
Q  209 ttgattacaca 219  Q
    |||||||||||    
T  40377105 ttgattacaca 40377115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 50974686 - 50974602
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||    
T  50974686 gcactcttgaaggatttcaaaagaaaaaattattttataaaaaagtcaaatatttcaattttcgatgcattaattacatatattt 50974602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 45753445 - 45753528
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||| | |||||||||||||||| ||||    
T  45753445 cactctttaaagattctaaaagaagaaattatttcagaaaaatgtcaaatatttcaattttcaatgcattgattacacaaattt 45753528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 5115718 - 5115634
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||| || |||||||||||||||| ||||||| |||||||| ||||    
T  5115718 gcactctttaaggattctaaaagaataaattatgttataaaaaagttaaatatttcaatttccaatgcattaattacacaaattt 5115634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 5787552 - 5787470
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||| ||||||||||| ||||||||||||  || |||||||||||||||| ||||||| |||||||||||||    
T  5787552 cactctttaaggattc-aaaagaagaaaatattttataaaatagttaaatatttcaatttccaatgcattaattacacatattt 5787470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 5851529 - 5851612
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatatt 223  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  ||||| ||||| |||| |||||||||||||||| |||||    
T  5851529 gcactctttaaggatttcaaaagaagaaataattttataaaaaaatcaaagatttcgattttcgatgcattgattacaaatatt 5851612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 7549838 - 7549916
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||| ||||| ||||||||||| |||||    
T  7549838 cactctttaagaatttcaaaagaagaaataattttataaaaaagtcaaatatttcgatttctgatgcattgatcacaca 7549916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 36393477 - 36393562
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||  ||||||||||  |||| ||||||||||||||||| |||||    
T  36393477 ggcactctttaaggatttcaaaagaaaaaattatgttataaaaaaatcaaatattttgattttcgatgcattgattacacgtattt 36393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 12636414 - 12636336
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||||| |||| ||||||| |||| ||||| |||||| |||||| || ||||||||||||||||||    
T  12636414 tttaaggattccaaaagaataaataattttattaaaaagtcaagtatttcgatttcctatacattgattacacatattt 12636336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 25302067 - 25302150
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||||||| || |||| ||| |||||||| |||||| ||||| |||| | || ||||||||||||||||||    
T  25302067 cactctttaaggattccaaaacaaaaaataattgtataaaaaagtcaaagatttcgattttcaatacattgattacacatattt 25302150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 34596223 - 34596151
Alignment:
Q  147 ttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacata 221  Q
    |||||||||| ||||||||||||||||||||||||   ||||||||||| |||| | ||||||||||||||||||    
T  34596223 ttaaggattctaaaagaagaaattattttataaaa--ttcaaatatttcgattttcaatgcattgattacacata 34596151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 48947168 - 48947282
Alignment:
Q  110 atatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcat 209  Q
    ||||||||  ||||||||| |||| ||| |||| |||||||| || | |||  ||| ||||||||| |||||||||||||  ||||||||||| |||||     
T  48947168 atatgggttttgttaacgagtgcccctggggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac 48947267  T
Q  210 tgattacacatattt 224  Q
    |||||||||| ||||    
T  48947268 tgattacacaaattt 48947282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 34861359 - 34861262
Alignment:
Q  105 aaagaatatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    |||||||  ||||| ||||||||| |||| | | ||||||||||||| |||| |||  ||| ||||||||| ||||||||||||| ||||||||||||    
T  34861359 aaagaattagggtcttgttaacgagtgccccgggggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttcc 34861262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 44719176 - 44719259
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| |||||||||||||||| || | ||||||||||||||| || ||||||| | ||||| |||||| |||||||||| ||||    
T  44719176 cactttttaaggattccaaaaaaatatattattttataaaaaagttaaatattccgatttctgatgcaatgattacacacattt 44719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 2351400 - 2351454
Alignment:
Q  163 aagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||| ||||||| |||||| |||| ||||||||||||||||||||||    
T  2351400 aagaaattatttcataaaaaagtcaaacattttaatttccgatgcattgattaca 2351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 16113882 - 16113992
Alignment:
Q  109 aatatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgca 208  Q
    |||| ||||| ||||||||| |||||| | ||||||||||||| || | | |  ||| ||||||||| | |||||||||||  ||||||||||| |||||    
T  16113882 aataagggtcttgttaacgagtgcctccggggcactctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgca 16113981  T
Q  209 ttgattacaca 219  Q
     ||||||||||    
T  16113982 ctgattacaca 16113992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 50875699 - 50875773
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataa-aaatgtcaaatatttcaatttccgatgcattgatta 215  Q
    |||||||||| |||| ||||| |||||||||| ||||  ||| ||||||||||||||||||| ||||||||||||    
T  50875699 actctttaagcattctaaaaggagaaattattctataggaaaagtcaaatatttcaatttccaatgcattgatta 50875773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 28171590 - 28171517
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||| |||| ||||||| ||||||||||||||||| || ||||||||||||||   ||||||| ||||||    
T  28171590 tctttaagcattcaaaaagaaaaaattattttataaaaaagttaaatatttcaatttttaatgcattcattaca 28171517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 38570462 - 38570389
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||| || |||||||||||||| |||| || |||| ||||||||||||||||| | ||||||| ||||||    
T  38570462 tctttaagcatcccaaaagaagaaatgatttcatcaaaaagtcaaatatttcaattttcaatgcattaattaca 38570389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 43492242 - 43492166
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    ||||||||||||||||||| ||  ||||||||||||| | ||||| |||||| | |||||||||| |||||||||||    
T  43492242 ggcactctttaaggattcctaataaagaaattattttttaaaaaaagtcaaaaacttcaatttccaatgcattgatt 43492166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 52757398 - 52757470
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||| |||||||||| |||||||||| || |||||  ||||||||||||||||||| ||||||| ||||||    
T  52757398 tttaagcattccaaaaggagaaattattctacaaaaaaagtcaaatatttcaatttccaatgcatttattaca 52757470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 31042999 - 31043074
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    |||||||| |||| |||  ||| ||||||||| |||||||||||||  ||||||||| | ||||||||||||||||    
T  31042999 tctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgattacaca 31043074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 12148409 - 12148327
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||| ||| ||||| || | |||||||||| |||| || ||||||||  |||||| |||||||| ||||||||||||    
T  12148409 actctttaagaatttcaaaaaaaaatattattttatgaaaaagtaaaatattttgatttccaatgcattggttacacatattt 12148327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 33744247 - 33744170
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||| |||  |||| ||| ||||||||| | |||| |||||||||||| |||| | ||||||||||||||    
T  33744247 gcactctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattaca 33744170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 4521144 - 4521043
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| |||||| |  |||||||||||| || | |||| |||  |||||| | |||||| || ||| |||||||||||| ||||||||||    
T  4521144 gggtcttgttaacgagtgcctcgg--gcactctttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 4521047  T
Q  214 taca 217  Q
    ||||    
T  4521046 taca 4521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 4771996 - 4772100
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||| |||||| | ||||||||||||| || ||||| |||| ||||||||| | |||| ||  |||||||| |||| | ||| ||| ||||||||    
T  4771996 tgttaacgagtgcctccggggcactctttaagcataccaaatgaagcaattatttttttaaaaagtagaatatttcgattttcaatgtattaattacaca 4772095  T
Q  220 tattt 224  Q
     ||||    
T  4772096 cattt 4772100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 6983103 - 6983031
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattg 211  Q
    ||||||||||||| ||||||||  |||||||||||   |||||  ||||||||||||||||| | ||||||||    
T  6983103 ggcactctttaagtattccaaattaagaaattattcattaaaagagtcaaatatttcaattttcaatgcattg 6983031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 13954241 - 13954173
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcat 209  Q
    |||||||||||||||| | |||||||||||| ||||||||||  ||||| ||||  |||||| ||||||    
T  13954241 cactctttaaggattctagaagaagaaattactttataaaaaaatcaaaaattttgatttccaatgcat 13954173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 35259159 - 35259079
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||||||| || | |||  ||||||||||||| ||||||||| |||  ||||||||||| ||||  ||||||||||    
T  35259159 ggcactctttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattacaca 35259079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 703512 - 703445
Alignment:
Q  152 gattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||| |||||||  |||||||| ||||||||||||||||||| ||||| | |||||||  |||||||    
T  703512 gattcgaaaagaaataattatttcataaaaatgtcaaatattttaattttcaatgcatttgttacaca 703445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 25871437 - 25871379
Alignment:
Q  167 aattattttataaaa-atgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||| | |||| ||||||  |||||||||| |||||||||||||||||    
T  25871437 aattattttataaaataagtcatatattttgatttccgatgtattgattacacatattt 25871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 36321738 - 36321660
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||| || |||||| ||| ||||||| | || ||| || ||| ||||| |||||| ||||||||||||||    
T  36321738 ggcactctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattaca 36321660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 39241512 - 39241438
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacat 220  Q
    ||||||||||  |||| || || ||||||||||||||    |||||||| ||||| |||||||||||||||||||    
T  39241512 tttaaggattttaaaaaaataatttattttataaaaaaaataaatattttaattttcgatgcattgattacacat 39241438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 45584744 - 45584790
Alignment:
Q  171 attttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||  ||||||||||  |||||||||||||||||||||    
T  45584744 attttataaaaaaatcaaatattttgatttccgatgcattgattaca 45584790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 3047835 - 3047936
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| |||||| || |||| | | ||||||||||||| || | |||  ||| |||| || | |||||||||||||| |||| |||||| ||||||||||    
T  3047835 gggtcttgttaaagagtgcccccggggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattgat 3047934  T
Q  214 ta 215  Q
    ||    
T  3047935 ta 3047936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 7750423 - 7750500
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattatt-ttataaaaatgtcaaatatttcaatttccgatgcattgatta 215  Q
    ||||||||||||  ||| |||||| ||||| |||| ||| ||||| ||||||| ||||||||||| ||||||| ||||    
T  7750423 ggcactctttaaacattacaaaaggagaaaatattcttaaaaaaaagtcaaatgtttcaatttccaatgcattaatta 7750500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 19547162 - 19547089
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattga 212  Q
    |||| |||||||||||||| ||  |||||||||||   | |||||||| |||| ||||||| ||||||||||||    
T  19547162 ggcattctttaaggattcccaagtaagaaattattcattgaaaatgtccaatacttcaattcccgatgcattga 19547089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 28672373 - 28672316
Alignment:
Q  167 aattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||| |||||| |||||||||||  ||||   |||||||||||||||||||||    
T  28672373 aattattttttaaaaaagtcaaatattttgattttaaatgcattgattacacatattt 28672316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 46895949 - 46895998
Alignment:
Q  163 aagaaattattttataaaaatgtcaaatatttcaatttccgatgcattga 212  Q
    ||||||||||||  | |||| ||| |||||||||||||||||||||||||    
T  46895949 aagaaattatttattgaaaaagtctaatatttcaatttccgatgcattga 46895998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 50222688 - 50222635
Alignment:
Q  171 attttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||  |||||||||| ||||| | ||||||||||||||| |||||    
T  50222688 attttataaaaaaatcaaatattttaattttcaatgcattgattacacttattt 50222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 3338137 - 3338061
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatg-tcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||  |||| ||||||||||||||||| |||||||   | || ||||||||||| | ||||||||||||||    
T  3338137 actctttaaacattctaaaagaagaaattatttcataaaaaaaattaagtatttcaattttcaatgcattgattaca 3338061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 29525157 - 29525094
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgat 205  Q
    ||||||||||||||| ||||||| ||||||||| | |||||| || |||||||| ||||| ||||    
T  29525157 cactctttaaggatttcaaaagacgaaattattctttaaaaa-gttaaatattttaattttcgat 29525094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 46803493 - 46803593
Alignment:
Q  124 aacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatatt 223  Q
    ||||| || ||| ||||||||||||||||||||| ||   ||||| |||||| || ||| ||||||  || | | || | ||||||||||||||||||||    
T  46803493 aacgagtgtctccgaggcactctttaaggattcctaatttagaaagtattttttataaaagtcaaacgttactaatttcaatgcattgattacacatatt 46803592  T
Q  224 t 224  Q
    |    
T  46803593 t 46803593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 44646666 - 44646553
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcatt 210  Q
    |||||||| ||||||||| |||| | | |||| |||||||||||| |||||||||||| |||||||||| || |||||||||||| ||||||||||||||    
T  44646666 tatgggtcttgttaacgagtgcccccggggcattctttaaggatttcaaaagaagaaactattttataataaagtcaaatatttcgatttccgatgcatt 44646567  T
Q  211 gattacacatattt 224  Q
    ||||||||||||||    
T  44646566 gattacacatattt 44646553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 49446707 - 49446621
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttata-aaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  49446707 ggcactctttaaggattccaaaagaagaagttattttataaaaaaagtcaaatatttcgatttccgatgcattgattacacatattt 49446621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 44647994 - 44647909
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||| |||||||||||||    
T  44647994 ggcactctttaaagattccaaaagaagaaactattttataataaaatcaaatatttcaatttccgatgcattaattacacatattt 44647909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 40480312 - 40480205
Alignment:
Q  110 atatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcat 209  Q
    ||||| ||| ||| ||||| |||||||| | |||||||||||||| | ||||||||||||||| | ||||||| |||||||||||||||| ||||| |||    
T  40480312 atatgagtcttgtaaacgagtgcctctgggacactctttaaggatgctaaaagaagaaattatgtcataaaaaagtcaaatatttcaattcccgatacat 40480213  T
Q  210 tgattaca 217  Q
    ||||||||    
T  40480212 tgattaca 40480205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 6316944 - 6316834
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| |||||| | |||||||||||| |||| ||||||||||||| |||||||||||| | |||| ||||  |||| | ||||||||||    
T  6316944 gggtcttgttaacgagtgcctccggggcactctttaaagatttcaaaagaagaaataattttataaaaaaggcaaagattttgattttcaatgcattgat 6316845  T
Q  214 tacacatattt 224  Q
    |||||||||||    
T  6316844 tacacatattt 6316834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 31871168 - 31871090
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||| | |||| ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  31871168 ggcactttctaagcatttcaaaagaagaaattattttataaaaaagtaaaatatttcaatttccgatgcattgattaca 31871090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 33982390 - 33982503
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcatt 210  Q
    |||||||| ||| ||||| || ||| | || | |||||||||||| |||||||| ||||||||||||||||| || ||||||||| ||||||||| ||||    
T  33982390 tatgggtcttgtgaacgagtggctccggggtattctttaaggatttcaaaagaaaaaattattttataaaaaagttaaatatttcgatttccgatacatt 33982489  T
Q  211 gattacacatattt 224  Q
    ||||||| ||||||    
T  33982490 gattacatatattt 33982503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 53919861 - 53919936
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    ||||||||||||| ||| |||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  53919861 ggcactctttaagcatttcaaaagaataaattattctataaaaaagtcaaaaatttcaatttccgatgcattgatt 53919936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 39727666 - 39727589
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||| |||||||||||| ||||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  39727666 ggcacactttaaggattctaaaagaataaattattctataaaaa-gtcaaatatttcaatttctgatgcattgattaca 39727589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 41468053 - 41468155
Alignment:
Q  115 ggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    |||| ||||||||| |  ||||| || |||||||||| |||||||||||||||||||| ||||||||| || ||||||| | ||||| ||||||||||||    
T  41468053 ggtcttgttaacgagtttctctggggtactctttaagaattccaaaagaagaaattatgttataaaaaagttaaatattccgatttctgatgcattgatt 41468152  T
Q  215 aca 217  Q
    |||    
T  41468153 aca 41468155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 50115058 - 50115124
Alignment:
Q  157 caaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatatt 223  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  50115058 caaaagaagaaattattttataaaaaagtcaaagatttcgatttcctatgcattgattacacatatt 50115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 28165360 - 28165452
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgat 205  Q
    ||||| ||||||||| |||| |||||  ||||||||| ||||| |||||||||||||||||||| |||||  |||||||||||||||||||||    
T  28165360 gggtcttgttaacgagtgcccctgagatactctttaaagattctaaaagaagaaattattttataaaaaaaatcaaatatttcaatttccgat 28165452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 9802715 - 9802644
Alignment:
Q  153 attccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||    
T  9802715 attctaaaagaaaaaattattttataaaaaagtcaaatattttgatttccgatacattgattacacatattt 9802644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 42844038 - 42844121
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||| || |||| ||||| | ||||||||||||||||||  ||||||||||| |||| |||||||||||||||||||||||    
T  42844038 cactcttgaaagatttcaaaaaacgaaattattttataaaaaaatcaaatatttcgattttcgatgcattgattacacatattt 42844121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 24395310 - 24395224
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||| |||||  |  ||||||||||||||||||    
T  24395310 ggcactctttaaggattctaaaagaagaaattaatttataaaaaaggtcaaatatttcgatttctaagacattgattacacatattt 24395224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 12103953 - 12103868
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||| ||||||||||| ||||||| ||||||||| ||||||| |||||||| ||| |||||| |  ||||||||||||||||||    
T  12103953 ggcactttttaaggattctaaaagaataaattatttcataaaaaagtcaaataattcgatttccaaaacattgattacacatattt 12103868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 25196109 - 25196210
Alignment:
Q  119 atgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacac 218  Q
    |||||||||| |||||| ||  |||||||||||||||| ||||||| |||||| |||||||||| |||||||||||  |||||| |  |||| |||||||    
T  25196109 atgttaacgagtgcctccgaaacactctttaaggattctaaaagaaaaaattaatttataaaaaagtcaaatattttgatttccaagacattaattacac 25196208  T
Q  219 at 220  Q
    ||    
T  25196209 at 25196210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 20390018 - 20390098
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    |||| |||||||| ||||||||| ||||||| |||||||||||| |||||||||||  |||| |||||||||||| |||||    
T  20390018 ggcattctttaagaattccaaaacaagaaataattttataaaaaagtcaaatattttgattttcgatgcattgatcacaca 20390098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 53737907 - 53737827
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    |||||||||||||  |||||||| ||||||||||| | ||||||  ||||||||||| |||||| ||||||||| ||||||    
T  53737907 ggcactctttaagcgttccaaaataagaaattattctttaaaaaattcaaatatttcgatttccaatgcattgaatacaca 53737827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 1696282 - 1696223
Alignment:
Q  158 aaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||| ||||||  ||||||| | ||||||||||||||||||||||||||||||||    
T  1696282 aaaagaagatattattccataaaaaagacaaatatttcaatttccgatgcattgattaca 1696223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 42197042 - 42197113
Alignment:
Q  153 attccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| |||||||||||||||||||| ||||  ||||||||||  |||| |||| ||||||||||||||||||    
T  42197042 attctaaaagaagaaattattttattaaaaaatcaaatattttgattttcgatacattgattacacatattt 42197113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 7627952 - 7628030
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||| |||||||||| ||||||||||  ||| ||| ||||||| ||||||||||| || ||||| |||||    
T  7627952 ggcactctttaagcattccaaaaggagaaattattccatagaaaagtcaaatgtttcaatttccaatacattggttaca 7628030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 12329286 - 12329364
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||| ||| |||||| ||||||||||  |||||||  ||||||||||||||||||  ||||||||||||||    
T  12329286 gcactctttaagcatttcaaaaggagaaattattccataaaaaaagtcaaatatttcaatttcaaatgcattgattaca 12329364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 49144775 - 49144841
Alignment:
Q  158 aaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||||||||||| || ||| ||||  |||| |||||||||||||||| ||||||    
T  49144775 aaaagaagaaattattttataaaaaagttaaaaattttgattttcgatgcattgattacatatattt 49144841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 27346291 - 27346376
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||||| |||| ||||| |||||||||||||| |||||| ||||  ||||| | |||||| |||| ||| ||||    
T  27346291 ggcactctttaaggattctaaaaaaagaatttattttataaaaaagtcaaagattttgatttctggtgcatttattatacacattt 27346376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 30978787 - 30978698
Alignment:
Q  113 tgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    |||||| |||||| || |||| ||| ||||||||||||| ||||||||  ||||||| ||||  |||||| |||||||| ||||||||||    
T  30978787 tgggtcttgttaaggagtgcccctggggcactctttaagcattccaaattaagaaatgatttattaaaaaagtcaaatagttcaatttcc 30978698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 32806560 - 32806495
Alignment:
Q  159 aaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||| |  |||||||||||  ||||| |||||||||||||||||||||||| |||||||||    
T  32806560 aaagaagaattatttttataaaaaactcaaaaatttcaatttccgatgcattgattgcacatattt 32806495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 18089617 - 18089689
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||| |||||||||| |||||||||| || |||||  ||||||||||||||||||| ||||||| ||||||    
T  18089617 tttaagcattccaaaaggagaaattattctacaaaaaaagtcaaatatttcaatttccaatgcatttattaca 18089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 23230379 - 23230272
Alignment:
Q  109 aatatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgc 207  Q
    |||| ||||| | ||||||| || ||| ||| ||||||||||| |||||||||| ||||||||||  || ||||| || |||| ||||||||| | ||||    
T  23230379 aataagggtcttattaacgagtgtctccgagacactctttaagcattccaaaaggagaaattattccatgaaaaaagttaaatgtttcaattttcaatgc 23230280  T
Q  208 attgatta 215  Q
    ||||||||    
T  23230279 attgatta 23230272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 23016335 - 23016257
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||| || ||||||||  ||||||||||| | |||| | |||||| |||||||||||| ||||||||| ||||    
T  23016335 ggcactctttgagcattccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattgaataca 23016257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 35180718 - 35180640
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||| ||||| |||| ||||||||||  ||| ||| ||||||| ||||||||| | || |||||||||||    
T  35180718 ggcactctttaagcattcctaaaggagaaattattccatagaaaagtcaaatgtttcaattttcaatacattgattaca 35180640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 51230097 - 51230174
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatatt 223  Q
    ||||| |||| ||||| |||||||||||||||| ||| |||||||||||  |||||  ||  ||||||||||||||||    
T  51230097 tttaaagattacaaaataagaaattattttatataaaagtcaaatattttgatttcaaatcaattgattacacatatt 51230174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 54543568 - 54543641
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||  |||| ||||| ||||||||||| ||||||| |  |||| ||||||||||| ||||||||||||||    
T  54543568 tctttaaatattctaaaaggagaaattatttcataaaaaagcaaaatgtttcaatttccaatgcattgattaca 54543641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 28695731 - 28695822
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgagg-cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    |||||||| ||||||||| |||| || ||| ||||||||||||||| | ||  ||||||||||||| |||||| |||||| | ||||||||||    
T  28695731 tatgggtcttgttaacgagtgcc-ctaagggcactctttaaggattactaataaagaaattattttttaaaaaagtcaaaaacttcaatttcc 28695822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 34235924 - 34235984
Alignment:
Q  158 aaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||| |||||||||||||||||  |||||| |||||||||| | ||||||||||||||    
T  34235924 aaaagaataaattattttataaaaaaagtcaaaaatttcaattttcaatgcattgattaca 34235984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 40666965 - 40667041
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataa-aaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||| |||| ||||||||||||||||  |||| ||| || ||  |||||||||||| ||||||||||||||    
T  40666965 actctttaagcattctaaaagaagaaattattccataacaaaagtaaataatttcaatttccaatgcattgattaca 40667041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 41370280 - 41370196
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||| ||||| | ||||||  ||||||||||||   ||||| || |||||||||||||| | |||||||||||||||| ||||    
T  41370280 gcactcattaagcaatccaaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattgattacacaaattt 41370196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 44504168 - 44504084
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| || |||||||||||||||| | ||||||  ||||||||||  ||||| | || ||||||||| ||| ||||    
T  44504168 gcactctttaagggtttcaaaagaagaaattatgtcataaaatagtcaaatattataattttcaatacattgattatacaaattt 44504084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 33559231 - 33559169
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaa-atgtcaaatatttcaatttcc 202  Q
    ||||||||||| ||| |||||| | ||||||||| |||||| | |||||||||||||||||||    
T  33559231 cactctttaagtatttcaaaaggaaaaattatttcataaaagaagtcaaatatttcaatttcc 33559169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 37179686 - 37179760
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatta 215  Q
    ||||||||||| || |||||| ||| ||||||||| || ||| |||||| ||||| |||||| ||| ||||||||    
T  37179686 cactctttaagcataccaaaacaagtaattattttttagaaaagtcaaacatttcgatttccaatgtattgatta 37179760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 38494869 - 38494786
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||| ||||  |||| ||||| |||||||||||| | ||||  | ||||| |||| |||| |||||||||||||||||||||||    
T  38494869 ggcactttttagagatttcaaaaaaagaaattatttaaaaaaa--ggcaaatctttcgattttcgatgcattgattacacatattt 38494786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 39827261 - 39827184
Alignment:
Q  140 gcactctttaaggattccaaaagaag-aaattattttataaaaatgtcaaatatttcaatttccgatgcattgattac 216  Q
    |||||||||||| ||  ||||| ||| |||||||| | ||||||||||||| |||||||||| | || ||||||||||    
T  39827261 gcactctttaagcatatcaaaacaagcaaattattctttaaaaatgtcaaaaatttcaattttcaattcattgattac 39827184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 42957053 - 42956999
Alignment:
Q  168 attattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||| ||||||  ||||||||||||||||| ||||||| |||||||| ||||    
T  42957053 attattttaaaaaaat--caaatatttcaatttccaatgcattaattacacacattt 42956999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 19597237 - 19597185
Alignment:
Q  165 gaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||| | ||||||||||||||| |||||||||  ||||||||| ||||    
T  19597237 gaaattattctttaaaaatgtcaaatagttcaatttctaatgcattgaataca 19597185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 8247032 - 8247136
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcatt 210  Q
    |||||||| ||||||||| |||| | | | ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  8247032 tatgggtcttgttaacgagtgcccccgtgacactctttaaggattccaaaagaagaaataattttataaaaaagtcaaatatttcgatttccgatgcatt 8247131  T
Q  211 gatta 215  Q
    |||||    
T  8247132 gatta 8247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 35395155 - 35395266
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggc-actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattga 212  Q
    ||||| ||||||||| | || | ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||    
T  35395155 gggtcttgttaacgagtaccccggaggctactctttaaggattccaaaagaagaaactattttataaaaaagtcaaatattttaattttcgatgcattga 35395254  T
Q  213 ttacacatattt 224  Q
    ||||||||||||    
T  35395255 ttacacatattt 35395266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 3263711 - 3263825
Alignment:
Q  110 atatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcat 209  Q
    ||||| ||| ||||||||| ||| || | ||||||||||||| ||| ||||||||||||| |||||||||||| |||||| ||||| |||||||||||||    
T  3263711 atatgagtcttgttaacgagtgcttccggggcactctttaagaatttcaaaagaagaaatcattttataaaaaagtcaaagatttcgatttccgatgcat 3263810  T
Q  210 tgattacacatattt 224  Q
    |||||||||||||||    
T  3263811 tgattacacatattt 3263825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 28793303 - 28793413
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| ||| || |  || ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||| ||    
T  28793303 gggtcttgttaacgagtgcttccggtgcgctctttaaggattccaaaagaagaaatgattttataaaaaagtcaaatatttcgatttccgatgcattaat 28793402  T
Q  214 tacacatattt 224  Q
    |||| ||||||    
T  28793403 tacatatattt 28793413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 5356406 - 5356326
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||| |||||| ||||||||| |||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  5356406 tctttaaggataccaaaataagaaattaatttataaaaacgtcaaatatttcgattttcgatgcattgattacacatattt 5356326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 10051704 - 10051799
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatta 215  Q
    ||||||||| || | || ||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||  |||||||||||||||||||    
T  10051704 tgttaacgagtgtccctaaggcactctttaaggattttaaaagaagaaataattttataaaaaagtcaaatatttatatttccgatgcattgatta 10051799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 22473427 - 22473513
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||  |||||||||| |||||| ||||||||||||||||||||||    
T  22473427 ggcattctttaaggatttcaaaagaagaaattattttataaaaaaaatcaaatattttaatttctgatgcattgattacacatattt 22473513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 27016664 - 27016742
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||| |||||||||||||||||||||  ||||||| |||||| |||||||||||| |||||| |||||||    
T  27016664 ggcactctttaagcattccaaaagaagaaattattccataaaaaagtcaaaaatttcaatttccaatgcatcgattaca 27016742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 19692716 - 19692809
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattacacat-atttgatgat 230  Q
    |||||||||||| |||| ||||||||||||||| ||||| ||||| |||||||||||| |||| | ||||||||||||||||| ||||||||||    
T  19692716 ggcactctttaaagatttcaaaagaagaaattaatttataaaaaaagtcaaatatttcgattttcaatgcattgattacacataatttgatgat 19692809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 31672374 - 31672483
Alignment:
Q  109 aatatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgc 207  Q
    |||||||||| ||||||||| |||| | | ||||||||||||| |||||||||| ||||| ||||  || ||||| ||||||| ||||||||||| ||||    
T  31672374 aatatgggtcttgttaacgagtgcccccggggcactctttaagcattccaaaaggagaaactattccataaaaaaagtcaaatgtttcaatttccaatgc 31672473  T
Q  208 attgattaca 217  Q
    ||||||||||    
T  31672474 attgattaca 31672483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 14475094 - 14475035
Alignment:
Q  158 aaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  14475094 aaaagaagaaattattctataaaaatgtcaaatatttcaatttcagatgctttgattaca 14475035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 31889611 - 31889694
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||| ||||| |||||||||||||| ||||||||||  || |||||||||||||||  |||||||||||||||||||||    
T  31889611 actctttaacgattctaaaagaagaaattaatttataaaaaaagtaaaatatttcaatttctaatgcattgattacacatattt 31889694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 142465 - 142386
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacata 221  Q
    ||||||||| |||||||||||||||||   ||||||||||||  ||||||||||||||||| ||| |||||||||||||||    
T  142465 cactctttagggattccaaaagaagaagc-attttataaaaaaatcaaatatttcaatttctgatacattgattacacata 142386  T

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Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 21582366 - 21582450
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||| ||||||||||||||||||| ||||||||||||||||  |||||||||||| ||||| ||| || |||| ||||| ||||    
T  21582366 gcactttttaaggattccaaaagaataaattattttataaaatagtcaaatatttcgatttctgatacaatgatcacacacattt 21582450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 26663635 - 26663709
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacat 220  Q
    |||||| |||| |||| ||||||||||||| |||||| |||||||||||| |||||| ||| |||||||||||||    
T  26663635 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacacat 26663709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 26935230 - 26935304
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacat 220  Q
    |||||| |||| |||| ||||||||||||| |||||| |||||||||||| |||||| ||| |||||||||||||    
T  26935230 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacacat 26935304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 8761922 - 8761994
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    |||||||||||||||| |||| ||||||||||| |||||||| || |||||||||||||| | ||| ||||||    
T  8761922 cactctttaaggattctaaaaaaagaaattattctataaaaaagttaaatatttcaattttcaatgtattgat 8761994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 22871915 - 22871967
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatt 193  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  22871915 cactctttaaggattctaaaagaagaaaatattttataaaaaagtcaaatatt 22871967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 37976444 - 37976504
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    |||||||||  |||| ||||||||||||||||| |||||||  ||||||||||||||||||    
T  37976444 actctttaaacattctaaaagaagaaattatttcataaaaaaatcaaatatttcaatttcc 37976504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 4725954 - 4725892
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccga 204  Q
    |||| |||||||||| |||||||| ||||||||||||||||| |||||| ||||| ||||||||    
T  4725954 cactgtttaaggatttcaaaagaataaattattttataaaaa-gtcaaagatttcgatttccga 4725892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 14042459 - 14042541
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||| ||||| |||| || |||||||| | |||||| |||||||||||  |||||| |||||||||||| ||| ||||    
T  14042459 actctttaaagattctaaaataataaattattatttaaaaaagtcaaatattttgatttccaatgcattgattatacaaattt 14042541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 1354479 - 1354399
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttc 201  Q
    ||||||| | |||||| ||| ||||||| ||| |||| |||| |||||||||||||||||||| || ||||||||| |||||    
T  1354479 tgttaacaagtgcctccgagacactctt-aagaattctaaaaaaagaaattattttataaaaaagttaaatatttcgatttc 1354399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 12448667 - 12448744
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    |||| |||||||||  |||| |||||||||||  ||||||| || |||||||||||||| | ||||| ||||||||||    
T  12448667 actccttaaggattttaaaataagaaattattcaataaaaaagttaaatatttcaattttcaatgcaatgattacaca 12448744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 24241096 - 24241040
Alignment:
Q  168 attattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||| |||||||||||||||||   || ||||||||| ||||||||    
T  24241096 attattttataaaaaagtcaaatatttcaatttttaatacattgattatacatattt 24241040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 27650919 - 27650859
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttc 201  Q
    ||||||||||  ||||||||| ||||||||||| |||||||| || |||||||| ||||||    
T  27650919 cactctttaaacattccaaaaaaagaaattattatataaaaaagttaaatattttaatttc 27650859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 4641564 - 4641494
Alignment:
Q  137 gaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgca 208  Q
    ||||||||||||||||||| | || ||| |||||||||| |||||| |||||| ||||| |||||| |||||    
T  4641564 gaggcactctttaaggatttctaatgaataaattatttt-taaaaaagtcaaagatttcgatttccaatgca 4641494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 12933328 - 12933411
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||| || |||| ||||| || |||||||||||||| || ||||||||||| ||| |   |||||||||||||||| ||||    
T  12933328 cactcttcaacgatttcaaaataataaattattttataagaaagtcaaatattttaatatataatgcattgattacacaaattt 12933411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 12947547 - 12947630
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||| || |||| ||||| || |||||||| ||||| || ||||||||||| ||| |  ||||||||||||||||| ||||    
T  12947547 cactcttcaacgatttcaaaataataaattattctataagaaagtcaaatattttaatatatgatgcattgattacacaaattt 12947630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 34032228 - 34032141
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttc 201  Q
    ||||| ||||||||| || |  || ||||||||||||| |||| |||| ||| ||||||| | |||||| || |||||||||||||||    
T  34032228 gggtcttgttaacgagtgtccttggggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttc 34032141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 1031707 - 1031773
Alignment:
Q  136 tgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    |||||||||||||||  |||| |||| ||||||| ||| |||||||| ||| | |||||||||||||    
T  1031707 tgaggcactctttaaatattctaaaataagaaatcattatataaaaaagtccagtatttcaatttcc 1031773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 2816174 - 2816232
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    |||||||||| ||| ||||||||| ||||||| | ||||||  ||||||||||||||||    
T  2816174 actctttaagcatttcaaaagaagcaattattctttaaaaaaatcaaatatttcaattt 2816232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 24241267 - 24241185
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||| || |||| ||||||| |||||||||||  |||| |||||||||||| |||||  ||||||| |||| | ||||||    
T  24241267 actcttttagaattctaaaagaaaaaattattttaataaaaagtcaaatatttcgatttctaatgcattaattatatatattt 24241185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 42265430 - 42265504
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    |||||||||||||||||  ||  || |||||||| | |||||| |||||| |||||||||| | |||||||||||    
T  42265430 gcactctttaaggattcttaataaaaaaattattctttaaaaaagtcaaaaatttcaattttcaatgcattgatt 42265504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 43145811 - 43145877
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaa 180  Q
    ||||| |||||||||  | ||||||| ||||||||||| |||  ||||||||||||||||| |||||    
T  43145811 gggtcttgttaacgagcgtctctgagacactctttaagcattttaaaagaagaaattatttcataaa 43145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 591335 - 591262
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    ||||||||||||||| | ||  ||||||||||| | |||||| ||| || | |||||||||| |||||||||||    
T  591335 cactctttaaggatttctaataaagaaattattctttaaaaaagtcgaaaacttcaatttccaatgcattgatt 591262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 13978775 - 13978670
Alignment:
Q  109 aatatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgca 208  Q
    |||||||||| ||||||||| || |    ||||||| |||||||||| | ||  ||||||||||||  |||||| || ||| | |||||||||| |||||    
T  13978775 aatatgggtcttgttaacgagtgtcctaaaggcactttttaaggatttccaataaagaaattatttcttaaaaaagttaaaaacttcaatttccaatgca 13978676  T
Q  209 ttgatt 214  Q
    ||||||    
T  13978675 ttgatt 13978670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 16161412 - 16161497
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| ||||||||  | |||||||||||  ||||| || ||||| |||||||| | ||| ||| | |||||||||||    
T  16161412 ggcactctttaagcattccaaattaggaaattatttttaaaaaaagttaaataattcaattttcaatggattaaatacacatattt 16161497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 32017531 - 32017454
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattac 216  Q
    ||||||||||||  ||  ||||| ||| ||||||| | |||||| || |||||||||||||| | |||||||||||||    
T  32017531 ggcactctttaaacatatcaaaacaagcaattattctttaaaaaagtaaaatatttcaattttcaatgcattgattac 32017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 32691421 - 32691462
Alignment:
Q  160 aagaagaaattattttataaaaatgtcaaatatttcaatttc 201  Q
    ||||||| ||||||||||||||||||||| |||||| |||||    
T  32691421 aagaagacattattttataaaaatgtcaactatttcgatttc 32691462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 779079 - 779158
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||||||  |||| ||||  || ||||||||| |||||| || |||| |||| |||||| ||||||||||||||||    
T  779079 ggcactctttaaacattcaaaaattagtaattattttttaaaaa-gttaaatgtttcgatttccaatgcattgattacaca 779158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 38705088 - 38704977
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| |||| | || | |||||||||| |||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  38705088 gggtcttgttaacgagtgcccccgaagtactctttaagaattcaaaaagaaaaaattattttataaaaatgtcaaatattttgatttccgatgcattgat 38704989  T
Q  214 tacacatatttg 225  Q
    ||||||||||||    
T  38704988 tacacatatttg 38704977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 18399273 - 18399192
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattatttt-ataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  18399273 ggcactctttaaggattccaaaagaagaaataatttttataaaaaagtcaaatatttcgatttccgatgcattgattacaca 18399192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 34758897 - 34759007
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| |||||| | |||||||||||||||||| |||||||| |||||||||||||||| || ||||||||| | | | |||||||||||    
T  34758897 gggtcttgttaacgagtgcctccggggcactctttaaggattcaaaaagaagtaattattttataaaaaagtgaaatatttcgactcctgatgcattgat 34758996  T
Q  214 tacacatattt 224  Q
    |||| ||||||    
T  34758997 tacatatattt 34759007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 52340237 - 52340149
Alignment:
Q  137 gaggcactctttaaggattccaaaagaagaaattattttata-aaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||  ||||| ||||| ||||||||||||||||||||||||||||    
T  52340237 gaggcactctttaaggattccaaaggaagaaataattttataaaaaaaatcaaagatttcgatttccgatgcattgattacacatattt 52340149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 54912110 - 54912026
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||| |||||||||||| ||| |||||||||| || || ||||||||||||||| ||||||||||||||||||||||    
T  54912110 gcactctttaagaattccaaaagaataaactattttataacaaagttaaatatttcaatttcggatgcattgattacacatattt 54912026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 41571698 - 41571602
Alignment:
Q  122 ttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattatttta-taaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||| ||||| ||||||||||||| |||||||||||||||||||||| | |||||| | |||| |||||||||||  ||||||||||||||    
T  41571698 ttaacgaatgtctctggggcactctttaagcattccaaaagaagaaattatttcattaaaaaagccaaaaatttcaatttcgaatgcattgattaca 41571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 25548310 - 25548226
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| || ||||||||||| |||||||||||||  || |||||||||||||||  |||||||||||||||||||||    
T  25548310 cactctttaaggactctaaaagaagaaaatattttataaaaaaagttaaatatttcaatttctaatgcattgattacacatattt 25548226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 1511327 - 1511406
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||| || ||||||||||||||||||  || |||||||||||| |||||||||||| ||||||||||||||    
T  1511327 ggcactctttaagcatgccaaaagaagaaattattccatcaaaaatgtcaaagatttcaatttccaatgcattgattaca 1511406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 30464070 - 30463992
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| |||||| ||||||||||   ||||||||||||||    
T  30464070 ggcactcgttaagcattccaaaagaagaaattattctataaaaaagtcaaacatttcaatttttaatgcattgattaca 30463992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 38094427 - 38094529
Alignment:
Q  115 ggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    |||| ||||| |||||||||| |   |||| |||||| |||||| ||||||||||||||  ||| ||| |||||||||||||||||| ||||||||||||    
T  38094427 ggtcttgttagcgaatgcctccggaacactttttaagcattccataagaagaaattattccatataaaagtcaaatatttcaatttctgatgcattgatt 38094526  T
Q  215 aca 217  Q
    |||    
T  38094527 aca 38094529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 38388696 - 38388790
Alignment:
Q  130 tgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||| | |||||| ||||| ||||| |||||||||||||| |||||||||| |||||||||||  |||| |  ||||||||||||||||||||    
T  38388696 tgcctccggggcactatttaaagattctaaaagaagaaattaatttataaaaaagtcaaatattttgattttcattgcattgattacacatattt 38388790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 30687220 - 30687107
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcatt 210  Q
    ||||| || ||||||||| || ||| |||  ||||||||||||||| ||||||||||||||| |||||||||  ||||| | ||  ||||  ||||||||    
T  30687220 tatggatcttgttaacgagtgtctcagagatactctttaaggattctaaaagaagaaattatgttataaaaaaatcaaagagtttgatttttgatgcatt 30687121  T
Q  211 gattacacatattt 224  Q
    ||||||||||||||    
T  30687120 gattacacatattt 30687107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 4033025 - 4033108
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||  ||||| ||||| |||||||||||| |||||||||| ||||    
T  4033025 gcactttttaaggattctaaaaaaagaaattattttataaaaaaatcaaagatttcgatttccgatgca-tgattacacacattt 4033108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 53433280 - 53433221
Alignment:
Q  158 aaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||    
T  53433280 aaaagaagaaattattctataaaaaagtcaaatattttaattttcgatgcattgattaca 53433221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 55110027 - 55110105
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||| ||| |||| |||||||||||||||||  ||||||||||| |||| | |||||||||||||| ||||||    
T  55110027 tttaaggatttcaagagaaaaaattattttataaaaaaatcaaatatttcgattttcaatgcattgattacatatattt 55110105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 2831524 - 2831601
Alignment:
Q  123 taacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    |||||| ||||  |||| ||||||||||||||||||||  ||||||||||||| ||| || |||||||||||||||||    
T  2831524 taacgagtgcccatgagacactctttaaggattccaaatcaagaaattattttttaataaagtcaaatatttcaattt 2831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 7754875 - 7754798
Alignment:
Q  148 taaggattccaaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||||||| | ||||||||||||  |||||  ||||| ||||||||||||||||||| ||||||||    
T  7754875 taaggattccaaaagaagaagtaattttataaaaaaagtcaacgatttcgatttccgatgcattgattagacatattt 7754798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 27968193 - 27968276
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgca-ttgattacacatattt 224  Q
    |||| ||||||||||||||||||||||| || |||||||||| |||||| ||||  |||| ||||||| ||||||||||||||||    
T  27968193 cactttttaaggattccaaaagaagaaa-taatttataaaaaagtcaaagattttgattttcgatgcatttgattacacatattt 27968276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 19898188 - 19898130
Alignment:
Q  166 aaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| |||  |||||||||||||||| | |||||||||||||||||||||    
T  19898188 aaattattttatataaaaatcaaatatttcaattttcaatgcattgattacacatattt 19898130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 43749581 - 43749507
Alignment:
Q  145 ctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    |||||||||||| ||||||| |||||||| ||| |||| ||||||||||||||||| | ||  ||||||||||||    
T  43749581 ctttaaggattctaaaagaataaattattctattaaaaagtcaaatatttcaattttctatatattgattacaca 43749507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 28434506 - 28434581
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||||||  || |||| ||||||||| ||||||| |||||||||||  |||| ||||||||||||||||    
T  28434506 cactctttaaggattttaagagaataaattatttcataaaaa-gtcaaatattttgattttcgatgcattgattaca 28434581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 37775429 - 37775370
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    |||||| |||| ||||| |||||||||||||||||||||||| || ||||||||| ||||    
T  37775429 cactctataagaattcctaaagaagaaattattttataaaaaagttaaatatttcgattt 37775370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 37775500 - 37775461
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaa 180  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  37775500 cactctttaaggattcctaaagaagaaattattttataaa 37775461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 1680566 - 1680516
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatattt 194  Q
    ||||||||||||| ||||||| |||||| |||||||||| |||||||||||    
T  1680566 tctttaaggattcaaaaagaataaattaatttataaaaaagtcaaatattt 1680516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 21490704 - 21490630
Alignment:
Q  151 ggattccaaaagaagaaattatttta-taaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||| ||||||||| |||||||  |||||| ||||||||||||||||| | || ||||||| ||||||||||    
T  21490704 ggattccgaaagaagaagttatttttgtaaaaaagtcaaatatttcaattttcaattcattgatgacacatattt 21490630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 40546348 - 40546398
Alignment:
Q  167 aattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||| |||||| |||||||||||| |||||| ||||||||||||||    
T  40546348 aattattttttaaaaaagtcaaatatttcgatttccaatgcattgattaca 40546398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 53040464 - 53040542
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    |||||||||||||||| |||  ||||||||||| | ||||||  ||||||| |||||||||| ||| ||||| ||||||    
T  53040464 cactctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattgaatacaca 53040542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 779812 - 779710
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| ||||||  || ||||||||||  |||| ||||||| |||||||||||| |||| || ||||||||  |||| | ||||||| ||    
T  779812 gggtcttgttaacgagtgcctcc-agacactctttaaaaattctaaaagaataaattattttatgaaaaagttaaatattttgatttgcaatgcattcat 779714  T
Q  214 taca 217  Q
    ||||    
T  779713 taca 779710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 29099168 - 29099247
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||| |||||| ||||||||||||||||| |||  || ||||| |||||| |||||||||| | || |||||||||||    
T  29099168 ggcactttttaagcattccaaaagaagaaatgattccataaaaaaagtcaaaaatttcaattttcaattcattgattaca 29099247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 48322316 - 48322241
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||| |||| |||| ||| ||||||||| | |||| ||||||| |||| |||||| || |||||||||||    
T  48322316 actctttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacattgattaca 48322241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 52299036 - 52299110
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    |||||||||||||||||| ||  |||||||||||   |||||| |||||| | | |||||||| |||||||||||    
T  52299036 gcactctttaaggattcctaataaagaaattattccttaaaaaagtcaaaaactccaatttccaatgcattgatt 52299110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 52309189 - 52309246
Alignment:
Q  167 aattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||| | |||||| || ||||||||| |||||| ||||||||||||||| |||||    
T  52309189 aattattctttaaaaaggtaaaatatttcgatttccaatgcattgattacacgtattt 52309246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 20683134 - 20683025
Alignment:
Q  115 ggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    |||| ||||||||| |||| | | | ||||||||||||||||||||||||||||  ||||||||||||  ||||||||||| ||||||||||||||||||    
T  20683134 ggtcttgttaacgagtgcccccgggacactctttaaggattccaaaagaagaaaagattttataaaaaaatcaaatatttcgatttccgatgcattgatt 20683035  T
Q  215 acacatattt 224  Q
    ||||||||||    
T  20683034 acacatattt 20683025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 4238436 - 4238353
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||| |||||||||||||||||||||||    
T  4238436 cactctttaaggattcaaaaagaagaaattattttataaaaaaatcaaatatttcgattttcgatgcattgattacacatattt 4238353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 18053128 - 18053048
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacata 221  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| |||||    
T  18053128 cactctttaaggatttcaaaagaagaaattattttataaaaaagtcaaatattttgatttccgatgcattgattatacata 18053048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 44941222 - 44941109
Alignment:
Q  110 atatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcat 209  Q
    ||||| ||| ||||||||| |||| ||||| |||||||||||||||| ||||||||||| ||| ||||||||| || ||| ||||| |||||||||||||    
T  44941222 atatgagtcttgttaacgagtgcc-ctgagacactctttaaggattctaaaagaagaaagtatgttataaaaaagttaaagatttcgatttccgatgcat 44941124  T
Q  210 tgattacacatattt 224  Q
    |||||||| ||||||    
T  44941123 tgattacatatattt 44941109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 6761858 - 6761761
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||| | ||| || ||||||||||||||| |||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  6761858 tgttaacaagtgcttccgaggcactctttaagcattccaaaagaataaatcattctataaaaaagtcaaatatttcaatttccaatgcattgattaca 6761761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 8773786 - 8773701
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||||| ||||||    
T  8773786 ggcactctttaaagattctaaaagaagaaattattttataaaaaagtcaaatattttgatttctgatgcattgattacatatattt 8773701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 34546400 - 34546296
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||| |||| |||  ||||||||| ||||||||||| |||||||||| |||||||||| |||||||| ||| ||||| |||||||||||||||||    
T  34546400 tgttaacgagtgcccctggagcactctttgaggattccaaatgaagaaattaatttataaaaaagtcaaatacttcgatttctgatgcattgattacaca 34546301  T
Q  220 tattt 224  Q
     ||||    
T  34546300 cattt 34546296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 8789851 - 8789934
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||| ||||| ||||||||||||||||||||||||| || ||||||||  ||||| ||||||||||||||||||||||    
T  8789851 cactctttaaagattctaaaagaagaaattattttataaaaaagttaaatattttgatttctgatgcattgattacacatattt 8789934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 35228732 - 35228812
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||| ||||||||||||||||||| ||||||  ||||||||||| |||||  ||||||| |||||||||||||    
T  35228732 tctttaaggatttcaaaagaagaaattattttctaaaaagatcaaatatttcgatttctaatgcatttattacacatattt 35228812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 2826094 - 2825984
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| || | ||| || |||||||||| || | |||| ||||||||||||| |||||| || ||||||||| |||||| ||||||||||    
T  2826094 gggtcttgttaacgagtgtccctgtggtactctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattgat 2825995  T
Q  214 tacacatattt 224  Q
    |||||| ||||    
T  2825994 tacacacattt 2825984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 42966923 - 42967028
Alignment:
Q  113 tgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattg 211  Q
    |||||| ||| | ||| |||||| ||| ||||||||||| || | ||||||||||||||||| || ||||| || ||||||||||||| |||||||||||    
T  42966923 tgggtcttgtcagcgagtgcctccgagacactctttaagaatactaaaagaagaaattatttcataaaaaaagttaaatatttcaattcccgatgcattg 42967022  T
Q  212 attaca 217  Q
    ||||||    
T  42967023 attaca 42967028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 42945129 - 42945042
Alignment:
Q  137 gaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||| ||||||||||  ||||||| | |||||||||| ||||  ||||||||||| ||||||  ||||||||||||||||||||    
T  42945129 gaggcactttttaaggattttaaaagaaaacattattttattaaaaactcaaatatttcgatttccagtgcattgattacacatattt 42945042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 24765303 - 24765413
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| ||||||| | ||||||||||||||| |||||   ||||| ||||   ||||||  ||||||||| ||| |||| ||||||||||    
T  24765303 gggtcttgttaacgagtgcctctaaagcactctttaaggatcccaaatttagaaaatattccttaaaaaaatcaaatattacaaattccaatgcattgat 24765402  T
Q  214 tacacatattt 224  Q
    |||||||||||    
T  24765403 tacacatattt 24765413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 12075635 - 12075572
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    ||||||||||||| || ||||||||||||| ||||| ||| ||| |||||||||||||||||||    
T  12075635 ggcactctttaagcataccaaaagaagaaactatttcatacaaaagtcaaatatttcaatttcc 12075572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 433621 - 433551
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattg 211  Q
    |||||||||||||||||||||||| |||||| |||||||||| || ||||||||  ||||  |||||||||    
T  433621 cactctttaaggattccaaaagaataaattaatttataaaaaagttaaatattttgatttttgatgcattg 433551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 2393148 - 2393098
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatattt 194  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||||||||    
T  2393148 tctttaaggattctaaaagaagaaattaatttataaaaaagtcaaatattt 2393098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 3882584 - 3882694
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| ||||   | ||||||||||||| |||| |||| ||| ||||||| | |||||| ||||||||||||  ||| | ||||||||||    
T  3882584 gggtcttgttaacgagtgccctcggggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattgat 3882683  T
Q  214 tacacatattt 224  Q
    |||||| ||||    
T  3882684 tacacacattt 3882694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 16572013 - 16572087
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatta 215  Q
    ||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||  |||| | ||| ||||||||    
T  16572013 cactctttaaggatttcaaaagaagaaattactttatataaatatcaaatattttgattttcaatgtattgatta 16572087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 5962103 - 5961998
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaag-aaattattttat-aaaaatgtcaaatatttcaatttccgatgcattg 211  Q
    ||||| ||||||||| |||||| ||| ||||||||||| |||| |||||||| ||| ||||  || |||||  | |||||||||||||||| ||||||||    
T  5962103 gggtcttgttaacgagtgcctccgagacactctttaagcattctaaaagaagaaaaatattccataaaaaaaattaaatatttcaatttccaatgcattg 5962004  T
Q  212 attaca 217  Q
    ||||||    
T  5962003 attaca 5961998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 8964386 - 8964470
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||| |||||| |||| |||  ||| ||||||| | |||||| || |||||||||||||||| |||||||||||||||| ||||    
T  8964386 gcactgtttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattt 8964470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 2769386 - 2769280
Alignment:
Q  111 tatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcat 209  Q
    |||||||| ||||||||| |||| | | ||||||||||||| |||| ||||| ||||||||||  || |||||||||||||   ||||||||  ||||||    
T  2769386 tatgggtcttgttaacgagtgccccgg-ggcactctttaagcattcaaaaaggagaaattattccataaaaaatgtcaaatgaatcaatttctaatgcat 2769288  T
Q  210 tgattaca 217  Q
    ||||||||    
T  2769287 tgattaca 2769280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 9153581 - 9153502
Alignment:
Q  145 ctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||  ||||||||||| | |||||| | |||| | |||||||||| ||||||||| |||||| ||||    
T  9153581 ctttaaggattccaaattaagaaattattctttaaaaaaggcaaacacttcaatttccaatgcattgaatacacaaattt 9153502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 31448399 - 31448316
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||| |||| | ||||||||||||||||||||||||  | ||| ||||  ||||||||| |||| ||||| |||||||    
T  31448399 cactctttaaagatttctaaagaagaaattattttataaaaaatttaaaaattttgatttccgatacattaattactcatattt 31448316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 33276004 - 33275945
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    ||||||||||| |||| |||| ||||||||||||| |||||| || ||||||||||||||    
T  33276004 cactctttaagcattctaaaacaagaaattattttttaaaaaagttaaatatttcaattt 33275945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 7271771 - 7271858
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaat----gtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||| |||| |||||| ||| |||||||||     |||||||||||  |||||| |||||||||||||| ||||||    
T  7271771 cactctttaaggattctaaaaaaagaaactatcttataaaaaaaaaagtcaaatatttttatttccaatgcattgattacatatattt 7271858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 43461079 - 43461009
Alignment:
Q  143 ctctttaaggattccaaaagaagaaattattttata-aaaatgtcaaatatttcaatttccgatgcattga 212  Q
    ||||||||| ||| ||||||||||| |||||||||| ||||  ||||| |||||||||||| |||||||||    
T  43461079 ctctttaagcatttcaaaagaagaagttattttataaaaaaaatcaaaaatttcaatttccaatgcattga 43461009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 6334758 - 6334709
Alignment:
Q  166 aaattattttataaaaatgtcaaatatttcaatttccgatgcattgatta 215  Q
    |||||||||| |||||||||||||  ||||||||||| ||||||||||||    
T  6334758 aaattattttttaaaaatgtcaaagttttcaatttccaatgcattgatta 6334709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 26408457 - 26408369
Alignment:
Q  138 aggcactctttaaggattccaaaagaagaaattattttataaaaat--gtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||| || |||||| ||| |||||||| | |||||   || |||||||||||||||  || ||||||||||||||||||    
T  26408457 aggcactctttaagcataccaaaacaagcaattatttaaaaaaaaaaagtaaaatatttcaatttctaatacattgattacacatattt 26408369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 42924529 - 42924452
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||||||| |||| |||||||| |||||||||  |||||  |||||||||||||||| | | | ||||||||||    
T  42924529 gcactctttaagcattctaaaagaagtaattatttttaaaaaaaatcaaatatttcaattttcaacgtattgattaca 42924452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 14102432 - 14102332
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattt-tataaaaatgtcaaatatttcaatttccgatgcattgattacac 218  Q
    ||||||||| |||||| |  |||||||||||  || |||||| ||||||||||||  | ||||| || ||||||||| |||||| || ||||||||||||    
T  14102432 tgttaacgagtgcctccggagcactctttaaacatgccaaaataagaaattatttaaaaaaaaaagttaaatatttcgatttccaatacattgattacac 14102333  T
Q  219 a 219  Q
    |    
T  14102332 a 14102332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 3199600 - 3199546
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatattt 194  Q
    |||||||||||  |||| |||| ||||||||||||||||||||  ||||||||||    
T  3199600 gcactctttaataattctaaaataagaaattattttataaaaaattcaaatattt 3199546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 11278757 - 11278811
Alignment:
Q  170 tattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| || |||||||||||||| | |||||||  ||||||||||||    
T  11278757 tattttataaaaaagttaaatatttcaattttcaatgcattagttacacatattt 11278811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 31513721 - 31513826
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||| ||| || ||| | |||||||||||||  ||| |||| ||||| |  |||||||||||| | |||| |||| |||||| ||||||||||    
T  31513721 gggtcttgttagcgagtgtctccggggcactctttaagctttctaaaataagaattatttttataaaaattt-aaatgtttcgatttccaatgcattgat 31513819  T
Q  214 tacacat 220  Q
    |||||||    
T  31513820 tacacat 31513826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 4616846 - 4616909
Alignment:
Q  153 attccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||| |||||| |||||||||| ||||||| || ||||||| |||||| | ||||||||||||||    
T  4616846 attcgaaaagatgaaattatttcataaaaa-gttaaatattacaattttcaatgcattgattaca 4616909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 13197246 - 13197321
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||| || ||||  |||| |||||||||||| ||||||| |||||||||||||||||   ||||||| ||||||    
T  13197246 cactcttcaatgattttaaaataagaaattatttcataaaaa-gtcaaatatttcaatttttaatgcattaattaca 13197321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 18375058 - 18375130
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgatt 214  Q
    |||||||||||||||| ||  ||||||||||| | |||||| |||||| | | |||||| | |||||||||||    
T  18375058 actctttaaggattcctaataaagaaattattctttaaaaaagtcaaaaactccaattttcaatgcattgatt 18375130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 43745592 - 43745652
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattt 174  Q
    ||||| ||||||||| ||||  |  ||||||||||||||||||||||  ||||||||||||    
T  43745592 gggtcttgttaacgagtgcccttagggcactctttaaggattccaaataaagaaattattt 43745652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 6e-27; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 45368836 - 45368751
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| ||||||| |||||| ||||||||    
T  45368836 ggcactctttaaggattccaaaaaaagaaattattttataaaaaagttaaatatttcaattttcgatgcaatgattatacatattt 45368751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 31206301 - 31206388
Alignment:
Q  137 gaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||    
T  31206301 gaggtactctttaaggattcaaaaagtagaaattattttataaaaaaatcaaatattttgatttccgatgcattgattacacatattt 31206388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 5020162 - 5020084
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacat 220  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  5020162 actctttaaggattctaaaagaagaaataattttataaaaaagtcaaagatttcaatttccgatacattgattacacat 5020084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 38956884 - 38956962
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||| |||||| | ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  38956884 tttaaggattctaaaagatgtaattaatttataaaaaagtcaaatatttcgatttccgatgcattgattacacatattt 38956962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 5217867 - 5217786
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||| ||||  | |||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  5217867 cactctttaaggattcaaaaa--ataaatgattttataaaaaagtcaaatatttcgatttccgatgtattgattacacatattt 5217786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 42760258 - 42760182
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||| |||||||||| ||||||||||  |||||||  |||||| ||||||||||| ||||||||||||||    
T  42760258 cactctttaagcattccaaaaggagaaattattccataaaaaaatcaaatgtttcaatttccaatgcattgattaca 42760182  T

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Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 24103182 - 24103087
Alignment:
Q  121 gttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattac 216  Q
    |||||||| ||| || ||| ||||||||||| |||| |||| ||||||||||||| | |||| ||||||| |||| |||||||||||| |||||||    
T  24103182 gttaacgattgcttccgagacactctttaagcattctaaaataagaaattatttttttaaaaggtcaaatgtttcgatttccgatgcaatgattac 24103087  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 33636713 - 33636789
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||| |||| ||||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| | ||||||    
T  33636713 cactctttaagcattctaaaaggagaaattatttcataaaaaagtcaaatgtttcaatttccaatgcaataattaca 33636789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 30534985 - 30535088
Alignment:
Q  113 tgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattga 212  Q
    |||||| ||||||||| || |||||  | |||||||||| |||| ||||| ||||||||||  |||||||  |||||| ||||||||| | |||||||||    
T  30534985 tgggtcttgttaacgagtgtctctggagtactctttaagcattctaaaaggagaaattattccataaaaaaatcaaatgtttcaattttcaatgcattga 30535084  T
Q  213 ttac 216  Q
    ||||    
T  30535085 ttac 30535088  T

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Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 7044444 - 7044383
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    |||||||||||||||||| |||||||||||||| ||||| |||| |||||| ||||| ||||    
T  7044444 ggcactctttaaggattctaaaagaagaaattaatttattaaaaagtcaaacatttcgattt 7044383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 22600999 - 22601064
Alignment:
Q  146 tttaaggattccaaaagaagaaattatttta-taaaaatgtcaaatatttcaatttccgatgcatt 210  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||| |||||||| |||||||||    
T  22600999 tttaagcatttcaaaagaagaaattattttattaaaaaagtcaaatacttcaatttacgatgcatt 22601064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 27633496 - 27633572
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||| || |||| |||||||| ||||||||  |||||||  |||||||||||||||||||||||||| ||||||    
T  27633496 gcactcttcaaagatttcaaaagaa-aaattattcaataaaaaaatcaaatatttcaatttccgatgcattcattaca 27633572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 34336610 - 34336511
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| |||| || | |||||||||||||||||  ||  ||||||||||| | |||||| |||||| | |||||||||| ||||||||||    
T  34336610 gggtcttgttaacgattgcc-cttatgcactctttaaggattcttaataaagaaattattctttaaaaaagtcaaaaacttcaatttccaatgcattgat 34336512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 28313647 - 28313565
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||| || |||||||||| |||||||| ||| |||||| | | |||||||||||||| | ||| |||||||||||||||||    
T  28313647 cactcttaaatgattccaaaataagaaatt-tttcataaaatttttaaatatttcaattttcaatgtattgattacacatattt 28313565  T

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Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 7691353 - 7691423
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcatt 210  Q
    |||||||||||| |||  ||||||||||||||||  ||| |||  | ||||||||||||||||||||||||    
T  7691353 gcactctttaagcattttaaaagaagaaattattccatacaaaaattaaatatttcaatttccgatgcatt 7691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 39932819 - 39932729
Alignment:
Q  110 atatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    ||||| ||| ||||||||||| |||| ||  ||||||||||  |||| |||||||| ||| |||  ||||||| |||||||||||||||||    
T  39932819 atatgagtcttgttaacgaattcctccgaaacactctttaaacattctaaaagaagtaataattccataaaaaagtcaaatatttcaattt 39932729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 10335135 - 10335050
Alignment:
Q  140 gcactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||| ||||||||||  ||||| | ||||||| |||| ||| ||||    
T  10335135 gcactctttaagaattccaaaagaataaattattctataaaaaaagtcaaatattataattttcaatgcattaattatacaaattt 10335050  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 36819800 - 36819752
Alignment:
Q  134 tctgaggcactctttaaggattccaaaagaagaaattattttataaaaa 182  Q
    ||||| ||||||||||| ||||| ||||||| |||||||||||||||||    
T  36819800 tctgaagcactctttaaagattctaaaagaaaaaattattttataaaaa 36819752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 39691246 - 39691142
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||| ||||   ||| ||||||||||| |||||| |  || |||||||| | |||||| |||||||| |||||||| | ||||||||| ||||||    
T  39691246 tgttaacgagtgccctcgagacactctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacaca 39691147  T
Q  220 tattt 224  Q
     ||||    
T  39691146 aattt 39691142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 1876614 - 1876515
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||| |||| | | ||||||||||||| || | |||  ||| ||||||| | | |||||||||||  ||||||||||| ||||| ||||||||||    
T  1876614 tgttaacgagtgcccccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactgattacaca 1876515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 27055901 - 27055984
Alignment:
Q  137 gaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacat 220  Q
    ||||||||||||||| |||  |||| |||||||||||| | || || || |||| |||| |||||| ||| |||||||||||||    
T  27055901 gaggcactctttaagcattttaaaataagaaattatttcaaaagaaagttaaatgtttcgatttccaatgtattgattacacat 27055984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 37564464 - 37564365
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||| |||||||| | ||||||||||  || | |||  ||||||||||| | |||||| |||||||| |||||||||| ||| ||| | ||||||    
T  37564464 tgttaacgagtgcctctgggacactctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaatacaca 37564365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 40380230 - 40380172
Alignment:
Q  158 aaaagaagaaattattttataaaaatg--tcaaatatttcaatttccgatgcattgatt 214  Q
    ||||||||||||||||| |||||||    |||||||||||||||| |||||||||||||    
T  40380230 aaaagaagaaattatttcataaaaaaaaatcaaatatttcaattttcgatgcattgatt 40380172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 9632961 - 9633007
Alignment:
Q  178 aaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||| |||||||||||  ||||| ||||||||||||||||||||||    
T  9632961 aaaaaagtcaaatattttgatttcagatgcattgattacacatattt 9633007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 20169827 - 20169746
Alignment:
Q  143 ctctttaaggattccaaaagaagaaattattttataaaaatgtc-aaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||| ||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||   |||||||||||| | ||||||    
T  20169827 ctctttaaagattctaaaagaataaattattttataaaaa-gtcaaaatatttcgatttttaatgcattgattatatatattt 20169746  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 20279693 - 20279607
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    ||||| ||||||| | |||| | | ||||||||||||| |||| |||| ||| ||||||| | | |||| |||||||||||||||||    
T  20279693 gggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattt 20279607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 21066320 - 21066234
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    ||||| ||||||| | |||| | | ||||||||||||| |||| |||| ||| ||||||| | | |||| |||||||||||||||||    
T  21066320 gggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattt 21066234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 35592406 - 35592495
Alignment:
Q  112 atgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttcc 202  Q
    ||||||| ||||||||| |||  | | | ||||||||| |||||  |||| ||||||||||||  |||||| |||||||||||||||||||    
T  35592406 atgggtcctgttaacgagtgcacccgggacactcttta-ggatttaaaaataagaaattatttcgtaaaaaagtcaaatatttcaatttcc 35592495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 6270335 - 6270372
Alignment:
Q  163 aagaaattattttataaaaatgtcaaatatttcaattt 200  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  6270335 aagaaattatttcataaaactgtcaaatatttcaattt 6270372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 12002260 - 12002345
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| || | |||  ||| ||||||| | ||||||||| |||  ||||||||||| ||||| |||||||||| ||||    
T  12002260 ggcactctttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgattacacaaattt 12002345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 7931709 - 7931793
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| ||||||| || |||||||||||||||||  || ||||| ||||||||||  ||||| | ||| |||||||||||| ||||    
T  7931709 cactttttaagggttacaaaagaagaaattattcaataaaaaaggtcaaatattataattttcaatgtattgattacacaaattt 7931793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 32271187 - 32271243
Alignment:
Q  163 aagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||||||| ||||||||| |||  ||||||||||  || |||||||||||||    
T  32271187 aagaaattattttttaaaaatgttaaagttttcaatttctaattcattgattacaca 32271243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 41385239 - 41385343
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacaca 219  Q
    ||||||||| || | | |||||| |||||||| | ||||||| |||||||||||   ||| || |||| || ||||||||| | ||| ||||||||||||    
T  41385239 tgttaacgagtgtccccgaggcattctttaagcaatccaaaataagaaattattccttaagaaagtcagatgtttcaattttcaatgtattgattacaca 41385338  T
Q  220 tattt 224  Q
     ||||    
T  41385339 aattt 41385343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 18251 - 18144
Alignment:
Q  110 atatgggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcat 209  Q
    ||||| ||| ||| ||||| |||||||| | |||||||||||||| | ||||||||||||||| | ||||||| |||||||||||||||| ||||| |||    
T  18251 atatgagtcttgtaaacgagtgcctctgggacactctttaaggatgctaaaagaagaaattatgtcataaaaaagtcaaatatttcaattcccgatacat 18152  T
Q  210 tgattaca 217  Q
    ||||||||    
T  18151 tgattaca 18144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 12307821 - 12307903
Alignment:
Q  142 actctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| | || |||| |||||||||||||    
T  12307821 actctttaaggatttcaaaagaagaaattattttataaaaaagtcaaatattttaattttcaatacattaattacacatattt 12307903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 22696068 - 22696006
Alignment:
Q  120 tgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaa 182  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22696068 tgttaacgagtgcctctgatgcactctttaaggattccaaaagaagaaattattttataaaaa 22696006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 12383131 - 12383046
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||| || ||||||||  ||||||||||||||||||| ||||||||    
T  12383131 ggcactctttaagaatttcaaaaggagaaattattttataaaaaagttaaatattttgatttccgatgcattgattatacatattt 12383046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 31702853 - 31702768
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| || || ||||| ||||||  |||||||||||||||||||||    
T  31702853 ggcactctttaagaatttcaaaagaagaaattattttataaaaaagttaagtattttaatttctaatgcattgattacacatattt 31702768  T

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Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 7465470 - 7465548
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||| |||||||||||  |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||    
T  7465470 ggcactttttaaggattcttaaagaagaaattgttccataaaaaagtcaaatatttcaatttccgatgcattgattaca 7465548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 8176324 - 8176404
Alignment:
Q  144 tctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    ||||||||||||| |||||||||||| | ||| |||||| |||||| |||||||||| ||||||||| |||||||||||||    
T  8176324 tctttaaggattctaaaagaagaaataaatttttaaaaaagtcaaaaatttcaattttcgatgcattaattacacatattt 8176404  T

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Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 6546823 - 6546747
Alignment:
Q  148 taaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| ||||||||| || ||||||||||||| ||| || |||| ||||||||||  ||||||||||| |||||||||    
T  6546823 taagaattccaaaataaaaaattattttatacaaaagttaaatttttcaatttctaatgcattgattgcacatattt 6546747  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 22695549 - 22695510
Alignment:
Q  185 tcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22695549 tcaaatatttcaattttcgatgcattgattacacatattt 22695510  T

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Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 24616292 - 24616343
Alignment:
Q  166 aaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| ||||||    
T  24616292 aaattattttataaaaatgtcaaatatttcaatttacagtgcattaattaca 24616343  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 6048383 - 6048302
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattacacat 220  Q
    ||||||||||||  |||| |||||||||||||| |||||||||| || ||| |||| ||||||| |   |||||||||||||    
T  6048383 ggcactctttaaaaattctaaaagaagaaattaatttataaaaaagtgaaacattttaatttccaagatattgattacacat 6048302  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 11675628 - 11675711
Alignment:
Q  137 gaggcactctttaaggattccaaaagaagaaattatttta---taaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||||||| |||| |||||||||||||||| |    |||||| |||||| |||||||||||| | ||||| ||||||    
T  11675628 gaggcactctttaagcattctaaaagaagaaattattattcattaaaaaagtcaaaaatttcaatttccaacgcattaattaca 11675711  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 29407971 - 29408071
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgat 213  Q
    ||||| ||||||||| |||||    ||||||||||||||||||| ||  ||||||||||| | |||||| |||||| | | |||||||  ||||||||||    
T  29407971 gggtcttgttaacgagtgccttaagggcactctttaaggattcctaataaagaaattattctttaaaaaagtcaaaaactccaatttctaatgcattgat 29408070  T
Q  214 t 214  Q
    |    
T  29408071 t 29408071  T

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Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 35241410 - 35241490
Alignment:
Q  145 ctttaaggattccaaaagaagaaattattttataaaa-atgtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||||||||||  |||| ||||||||||||||||||| |  | ||||||||  ||||| ||||||||||||| ||||||||    
T  35241410 ctttaaggattttaaaaaaagaaattattttataaaagaaattaaatattttgatttctgatgcattgattatacatattt 35241490  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 16442073 - 16442128
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatattt 194  Q
    |||||||||||| ||||| ||||||| |||||| |||||||||| |||||| ||||    
T  16442073 ggcactctttaaagattctaaaagaataaattagtttataaaaaagtcaaacattt 16442128  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 26311802 - 26311888
Alignment:
Q  139 ggcactctttaaggattccaaaagaagaaattattttataaaaat-gtcaaatatttcaatttccgatgcattgattacacatattt 224  Q
    |||| |||||||||||||  |||||| |||||| ||||||||||| || ||||||||  |||| | || |||| |||||||||||||    
T  26311802 ggcattctttaaggattctgaaagaataaattaatttataaaaatggttaaatattttgattttcaatacattaattacacatattt 26311888  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 27843313 - 27843241
Alignment:
Q  146 tttaaggattccaaaagaagaaattattttat-aaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||| |||||||||  ||||||||||| || ||||| ||||||||||||||||| | ||||| | ||||||    
T  27843313 tttaagcattccaaaaagagaaattatttcattaaaaaagtcaaatatttcaattttcaatgcactcattaca 27843241  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 30509311 - 30509387
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    ||||||||||| || |||||| ||| ||||||| | ||||||  ||||| ||||| |||| | ||||||||||||||    
T  30509311 cactctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgattaca 30509387  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 1978 - 1924
Alignment:
Q  163 aagaaattattttataaaaatgtcaaatatttcaatttccgatgcattgattaca 217  Q
    |||||||| ||| |||||||  | |||||||||| ||||||||||||||||||||    
T  1978 aagaaattttttcataaaaaaattaaatatttcattttccgatgcattgattaca 1924  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 194516 - 194572
Alignment:
Q  141 cactctttaaggattccaaaagaagaaattattttataaaaatgtcaaatatttcaat 198  Q
    |||||||||||||||| | || ||||||||||| |||||||| || ||||||||||||    
T  194516 cactctttaaggattctataataagaaattattctataaaaa-gtaaaatatttcaat 194572  T

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Target: scaffold0717 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 5099 - 5031
Alignment:
Q  114 gggtcatgttaacgaatgcctctgaggcactctttaaggattccaaaagaagaaattattttataaaaa 182  Q
    ||||| |||||| |||||| |||| || |||||||||| ||||| || |||||||||||| | ||||||    
T  5099 gggtcttgttaatgaatgcttctggggaactctttaagcattcctaatgaagaaattattctttaaaaa 5031  T

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