View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2851_low_20 (Length: 304)
Name: NF2851_low_20
Description: NF2851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2851_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 20 - 290
Target Start/End: Original strand, 32009634 - 32009904
Alignment:
| Q |
20 |
tactgctgcttacatacaacttaattaagtagggaatttagaaatgggaatgaattatctaccttgcaaacatttttaatatcatcactttttcccctaa |
119 |
Q |
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| T |
32009634 |
tactgctgcttacatacaacttaattaagtagggaccttagaaatgggaatgaattatctaacttgcaaacatttttaatatcatcactttttcccctaa |
32009733 |
T |
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| Q |
120 |
cgtgtactgacaacacaatataattctatcactttatacaaggaaagtttaccatgcattattctgttagatatttagtagcttacacaaaataaatcaa |
219 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32009734 |
cgtgtactgacaacacaatataattttatcactttatacaaggaaagtttaccatgcattattctgttagatatttagtagcttacacaaaatagatcaa |
32009833 |
T |
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| Q |
220 |
gcaacacatgcaatattactgtaatgagtcgagagtccttgagttggtatacggtattaatatgtattaat |
290 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |
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| T |
32009834 |
gcaacacatgcaatattactgtaatgagtcgcgagtccttgagttggtattcggtattaatatgtattaat |
32009904 |
T |
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