View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2851_low_27 (Length: 237)
Name: NF2851_low_27
Description: NF2851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2851_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 50507593 - 50507383
Alignment:
| Q |
1 |
ttatgattatgatagcggatattttatttatttatgccaaaatattgctatgggttttatagtgctatgaaaaatgcaaatgagcataaatcattttgat |
100 |
Q |
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| T |
50507593 |
ttatgattatgatagcggatattttatttatttatgccaaaatattgctatgggttttatagtgctatgaaaaatgcaaatgagcataaatcattttgat |
50507494 |
T |
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| Q |
101 |
tttttatgatacatttgtaatggtaattaatattggtaattaattacatttatgagtattagaagtgaatgacccagcttggtaaataaacaggggagag |
200 |
Q |
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| T |
50507493 |
tttttatgatacatttgtattggtaat-------------taattacatttatgagtattagaagtgaatgacccagcttggtaaataaacaggggagag |
50507407 |
T |
|
| Q |
201 |
atggttttgttagtagcaaattga |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
50507406 |
atggttttgttagtagcaaattga |
50507383 |
T |
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