View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2852_high_24 (Length: 237)
Name: NF2852_high_24
Description: NF2852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2852_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43985573 - 43985793
Alignment:
| Q |
1 |
gaatattatagcagctgcaatttgacgggcttcaagactaagtccatttttcagtacatacacaacgggatttaaaccgttatggtctattatattttca |
100 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
43985573 |
gaatattatagctgctgcaatttgacgggcttcaagactaagtccatttttcagtacatacacaacgggctttaaaccgttatggtctattatattttca |
43985672 |
T |
|
| Q |
101 |
ggcccggttgcatactttgaaagcttcagtaaagcagagattgcattctcctgagtggttttatcctccgtagctaaaagatccaacagtggtggcacag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43985673 |
ggcccggttgcatactttgaaagcttcagtaaagcagagattgcattctcctgagtggttttatcctccgtagctaaaagatccaacagtggtggcacag |
43985772 |
T |
|
| Q |
201 |
ttccaacttcaatcaaacaag |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
43985773 |
ttccaacttcaatcaaacaag |
43985793 |
T |
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