View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2853R-Insertion-10 (Length: 525)
Name: NF2853R-Insertion-10
Description: NF2853R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2853R-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 490; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 8 - 525
Target Start/End: Complemental strand, 40383634 - 40383117
Alignment:
| Q |
8 |
aatccgtgagcttgaagagactcccggaggaacaaaaagccctgtagagttcaacaagtcatggcagttaaagtataaaccagcatctgtaactgccgtt |
107 |
Q |
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|||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40383634 |
aatccgtgagcttgaagaaaatcccggaggaacaaaaagccttgtagagttcaacaagtcatggcagttaaagtataaaccagcatctgtaactgccgtt |
40383535 |
T |
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| Q |
108 |
aacggacctaaaatgtcgttaaaagacgccatcagtgccagtatctcaagagggaaattagtctcaggaactaatggtggtaatggaaacggtaactcaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
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| T |
40383534 |
aacggacctaaaatgtcgttaaaagacgccatcagtgcgagtatctcaagagggaaattagtctcaggaactaacggtggtaatggcaacggtaactcaa |
40383435 |
T |
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| Q |
208 |
ttgcgtcctcagttgccacttttgcaaatccgttttggattgaaatggcagttattggaaaacggtctctactaaactcaagacggatgccggaattatt |
307 |
Q |
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| T |
40383434 |
ttgcgtcctcagttgccacttttgcaaatccgttttggattgaaatggcggttattggaaaacggtctctactaaactcaagacggatgccggaattatt |
40383335 |
T |
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| Q |
308 |
cggaatccgtctcggtgcagttctggttaccggaggaatcttggccaccatcttttaccgtcttgacgattcaccaaaaggtgttcaagagcgtttgggt |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40383334 |
cggaatccgtctcggtgcagttctggttaccggaggaatcttggccaccatcttttaccgtcttgacgattcaccaaaaggtgttcaagagcgtttgggt |
40383235 |
T |
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| Q |
408 |
ttcttcgcctttgccatgtcaacaaccttctacacttgtgctgaagctatccccgttttccttcaagagcgttacattttcatgagagaaactgcttaca |
507 |
Q |
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| T |
40383234 |
ttcttcgcctttgccatgtcaacaaccttctacacttgtgctgaagctatccccgttttccttcaagagcgttacattttcatgagagaaactgcttaca |
40383135 |
T |
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| Q |
508 |
acgcttaccgtcgttctt |
525 |
Q |
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|||||||||||||||||| |
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| T |
40383134 |
acgcttaccgtcgttctt |
40383117 |
T |
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