View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2853R-Insertion-12 (Length: 492)

Name: NF2853R-Insertion-12
Description: NF2853R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2853R-Insertion-12
NF2853R-Insertion-12
[»] chr1 (1 HSPs)
chr1 (9-492)||(13860243-13860726)


Alignment Details
Target: chr1 (Bit Score: 484; Significance: 0; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 9 - 492
Target Start/End: Original strand, 13860243 - 13860726
Alignment:
Q  9 ctaaatactatttgaagataattaccattgttagatgatatattatgcaccaattcagctgctcaaacctgaaattccatcaatagaatctaccaaccaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13860243 ctaaatactatttgaagataattaccattgttagatgatatattatgcaccaattcagctgctcaaacctgaaattccatcaatagaatctaccaaccaa 13860342  T
Q  109 cttgaaatattcaatcttcaagcttttttctgactcaatcaacctccaagcttaaataatgttgcaatgagtaattttcttgctgatgataacttctcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13860343 cttgaaatattcaatcttcaagcttttttctgactcaatcaacctccaagcttaaataatgttgcaatgagtaattttcttgctgatgataacttctcaa 13860442  T
Q  209 tatcttaactaaaataaacttgccaataatgttggaaggtaaatgtgaaatatatacgaatagccgtgggaaaatgtcgttgcagaagaggcttcgcaat 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13860443 tatcttaactaaaataaacttgccaataatgttggaaggtaaatgtgaaatatatacgaatagccgtgggaaaatgtcgttgcagaagaggcttcgcaat 13860542  T
Q  309 cacacaagaagaagaatttccaaccttatgctaacccctcctctgcaactatctcccctgaattatttccttctttatttgtttctaaggcagaataata 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13860543 cacacaagaagaagaatttccaaccttatgctaacccctcctctgcaactatctcccctgaattatttccttctttatttgtttctaaggcagaataata 13860642  T
Q  409 atcttcttcttgtttttgtacgttccccaaaaatgtatgtgttataccataatgacatgatacgttattatcaacatggtcatg 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13860643 atcttcttcttgtttttgtacgttccccaaaaatgtatgtgttataccataatgacatgatacgttattatcaacatggtcatg 13860726  T

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