View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2853R-Insertion-17 (Length: 203)

Name: NF2853R-Insertion-17
Description: NF2853R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2853R-Insertion-17
NF2853R-Insertion-17
[»] chr4 (31 HSPs)
chr4 (8-191)||(21660156-21660339)
chr4 (8-191)||(21668920-21669103)
chr4 (127-202)||(51948480-51948555)
chr4 (127-198)||(28635696-28635767)
chr4 (125-191)||(24827823-24827889)
chr4 (127-191)||(9241037-9241101)
chr4 (127-191)||(19238589-19238653)
chr4 (127-191)||(39509070-39509134)
chr4 (127-191)||(47044717-47044781)
chr4 (126-178)||(51250547-51250599)
chr4 (137-178)||(56236940-56236981)
chr4 (127-191)||(37109363-37109427)
chr4 (134-202)||(43728402-43728470)
chr4 (127-191)||(55427212-55427276)
chr4 (127-178)||(12821968-12822019)
chr4 (127-202)||(14451747-14451821)
chr4 (122-189)||(52254418-52254485)
chr4 (132-202)||(13901747-13901817)
chr4 (132-198)||(25869582-25869648)
chr4 (126-176)||(27965537-27965587)
chr4 (145-198)||(17618299-17618352)
chr4 (125-198)||(19680793-19680866)
chr4 (150-191)||(38869791-38869832)
chr4 (127-176)||(49582206-49582255)
chr4 (127-191)||(5795421-5795485)
chr4 (132-184)||(7292817-7292869)
chr4 (127-191)||(31759670-31759734)
chr4 (127-198)||(37274464-37274536)
chr4 (126-190)||(37720227-37720291)
chr4 (148-184)||(42644929-42644965)
chr4 (127-191)||(46295097-46295161)
[»] chr5 (19 HSPs)
chr5 (134-191)||(14495817-14495874)
chr5 (134-191)||(1410671-1410728)
chr5 (127-191)||(16773807-16773871)
chr5 (124-202)||(30883199-30883277)
chr5 (132-202)||(43241683-43241753)
chr5 (126-198)||(34984805-34984877)
chr5 (127-202)||(16457810-16457885)
chr5 (127-198)||(29075781-29075852)
chr5 (134-184)||(29692405-29692455)
chr5 (123-191)||(87435-87503)
chr5 (127-191)||(6844729-6844793)
chr5 (127-187)||(8278291-8278351)
chr5 (158-202)||(12883871-12883915)
chr5 (123-191)||(30109320-30109388)
chr5 (150-187)||(15641808-15641845)
chr5 (151-191)||(9842858-9842898)
chr5 (127-183)||(21549157-21549213)
chr5 (127-191)||(21589288-21589352)
chr5 (123-175)||(24652864-24652916)
[»] chr3 (36 HSPs)
chr3 (134-191)||(4844523-4844580)
chr3 (134-191)||(4870219-4870276)
chr3 (134-191)||(2667869-2667926)
chr3 (125-189)||(36720379-36720443)
chr3 (126-193)||(31520615-31520682)
chr3 (132-202)||(13808886-13808956)
chr3 (126-191)||(10499121-10499186)
chr3 (134-184)||(17554778-17554828)
chr3 (127-189)||(31788984-31789046)
chr3 (126-183)||(5499427-5499484)
chr3 (134-191)||(16991549-16991606)
chr3 (127-183)||(203090-203146)
chr3 (127-191)||(2597232-2597296)
chr3 (135-175)||(12761520-12761560)
chr3 (150-202)||(28531059-28531111)
chr3 (127-198)||(4222141-4222212)
chr3 (127-178)||(42430335-42430385)
chr3 (126-189)||(46518627-46518690)
chr3 (132-191)||(47454629-47454688)
chr3 (132-191)||(49494158-49494217)
chr3 (125-191)||(8051212-8051278)
chr3 (151-193)||(11090175-11090217)
chr3 (125-191)||(30311304-30311370)
chr3 (157-191)||(44743867-44743901)
chr3 (127-189)||(51766896-51766957)
chr3 (132-202)||(53412950-53413020)
chr3 (137-198)||(7673279-7673340)
chr3 (126-187)||(9557319-9557380)
chr3 (132-173)||(17034993-17035034)
chr3 (134-191)||(21960558-21960615)
chr3 (150-191)||(51903890-51903931)
chr3 (157-193)||(7975448-7975484)
chr3 (135-183)||(11612307-11612355)
chr3 (127-191)||(17108910-17108974)
chr3 (138-202)||(30194981-30195045)
chr3 (134-202)||(38550405-38550473)
[»] chr6 (13 HSPs)
chr6 (126-191)||(33549103-33549168)
chr6 (125-191)||(31623003-31623069)
chr6 (127-191)||(30127400-30127464)
chr6 (134-189)||(24641204-24641259)
chr6 (150-187)||(9433606-9433643)
chr6 (132-191)||(6776619-6776678)
chr6 (133-191)||(11423572-11423630)
chr6 (125-191)||(12234519-12234585)
chr6 (132-178)||(32613165-32613211)
chr6 (126-189)||(12188317-12188380)
chr6 (132-179)||(13441055-13441102)
chr6 (151-202)||(21943429-21943480)
chr6 (127-184)||(14557962-14558019)
[»] scaffold0258 (1 HSPs)
scaffold0258 (127-191)||(15335-15399)
[»] chr7 (26 HSPs)
chr7 (127-191)||(22760863-22760927)
chr7 (121-191)||(17041024-17041094)
chr7 (132-189)||(23595734-23595791)
chr7 (127-191)||(23301614-23301678)
chr7 (127-191)||(48771938-48772002)
chr7 (126-187)||(2446307-2446368)
chr7 (133-202)||(19553460-19553528)
chr7 (126-191)||(23552117-23552182)
chr7 (127-184)||(42836020-42836077)
chr7 (126-191)||(43215183-43215248)
chr7 (127-191)||(7801180-7801244)
chr7 (127-191)||(15137553-15137617)
chr7 (127-191)||(20335843-20335907)
chr7 (127-191)||(25590611-25590675)
chr7 (127-191)||(26459422-26459486)
chr7 (134-189)||(37085563-37085618)
chr7 (132-191)||(41519276-41519335)
chr7 (134-184)||(36803646-36803696)
chr7 (127-180)||(22932734-22932787)
chr7 (127-184)||(25021354-25021411)
chr7 (134-191)||(45709720-45709777)
chr7 (134-178)||(4161295-4161339)
chr7 (132-184)||(21854553-21854605)
chr7 (151-191)||(26703149-26703189)
chr7 (131-191)||(28236593-28236653)
chr7 (134-202)||(33362639-33362707)
[»] chr1 (36 HSPs)
chr1 (132-191)||(15786332-15786391)
chr1 (124-202)||(40257396-40257474)
chr1 (126-191)||(25297771-25297836)
chr1 (123-191)||(8904410-8904478)
chr1 (125-202)||(42412681-42412757)
chr1 (125-201)||(11687626-11687702)
chr1 (132-191)||(44126400-44126459)
chr1 (151-184)||(9964462-9964495)
chr1 (126-191)||(41508830-41508895)
chr1 (126-191)||(51814493-51814558)
chr1 (151-191)||(12587294-12587334)
chr1 (127-191)||(19528339-19528403)
chr1 (125-189)||(21547494-21547558)
chr1 (127-202)||(9165196-9165271)
chr1 (154-197)||(17439944-17439987)
chr1 (125-192)||(21268004-21268071)
chr1 (132-191)||(26232398-26232457)
chr1 (132-191)||(33700785-33700844)
chr1 (134-200)||(2069663-2069728)
chr1 (127-189)||(16169992-16170054)
chr1 (132-198)||(17745261-17745327)
chr1 (133-202)||(32916804-32916871)
chr1 (134-184)||(51703786-51703836)
chr1 (127-184)||(952511-952568)
chr1 (133-202)||(6948078-6948147)
chr1 (150-191)||(27223142-27223183)
chr1 (126-191)||(36371469-36371534)
chr1 (126-187)||(45235395-45235456)
chr1 (127-191)||(1094525-1094589)
chr1 (134-178)||(11068868-11068912)
chr1 (157-197)||(12370193-12370233)
chr1 (127-191)||(12662282-12662346)
chr1 (127-191)||(31794276-31794340)
chr1 (126-178)||(37046984-37047036)
chr1 (134-190)||(42983387-42983443)
chr1 (134-202)||(52116782-52116850)
[»] chr2 (20 HSPs)
chr2 (126-191)||(39714991-39715056)
chr2 (134-202)||(41202257-41202325)
chr2 (132-187)||(6760892-6760947)
chr2 (125-191)||(34041600-34041666)
chr2 (132-193)||(16918588-16918649)
chr2 (126-191)||(37480074-37480139)
chr2 (124-193)||(42602551-42602620)
chr2 (125-193)||(1729814-1729882)
chr2 (127-191)||(5147691-5147755)
chr2 (127-191)||(19016031-19016095)
chr2 (135-191)||(21213777-21213833)
chr2 (127-191)||(26545840-26545904)
chr2 (127-191)||(28846691-28846755)
chr2 (126-198)||(29197381-29197453)
chr2 (127-191)||(42327407-42327471)
chr2 (127-191)||(42860348-42860412)
chr2 (124-191)||(29503268-29503335)
chr2 (133-183)||(12994396-12994446)
chr2 (126-187)||(7799051-7799112)
chr2 (127-191)||(19244109-19244173)
[»] chr8 (18 HSPs)
chr8 (127-202)||(23361650-23361725)
chr8 (125-191)||(16852338-16852404)
chr8 (127-191)||(968362-968426)
chr8 (136-202)||(10287484-10287550)
chr8 (134-184)||(28636362-28636412)
chr8 (134-184)||(28644096-28644146)
chr8 (134-184)||(28653048-28653098)
chr8 (125-191)||(35641913-35641979)
chr8 (126-198)||(28783059-28783131)
chr8 (132-191)||(2203497-2203556)
chr8 (127-178)||(20994483-20994534)
chr8 (132-191)||(29858061-29858120)
chr8 (126-200)||(4830486-4830560)
chr8 (125-191)||(5264542-5264608)
chr8 (125-191)||(19703499-19703565)
chr8 (132-198)||(36205200-36205266)
chr8 (150-198)||(11492078-11492126)
chr8 (127-191)||(26688865-26688929)
[»] scaffold0299 (1 HSPs)
scaffold0299 (133-191)||(11534-11592)
[»] scaffold0118 (1 HSPs)
scaffold0118 (127-202)||(41634-41709)
[»] scaffold1367 (1 HSPs)
scaffold1367 (133-191)||(852-910)
[»] scaffold0002 (1 HSPs)
scaffold0002 (132-202)||(94972-95042)
[»] scaffold0291 (1 HSPs)
scaffold0291 (134-191)||(2482-2539)
[»] scaffold0591 (1 HSPs)
scaffold0591 (148-184)||(5646-5682)
[»] scaffold0032 (1 HSPs)
scaffold0032 (127-175)||(112282-112330)
[»] scaffold0021 (1 HSPs)
scaffold0021 (150-190)||(157000-157040)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 6e-73; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 8 - 191
Target Start/End: Complemental strand, 21660339 - 21660156
Alignment:
Q  8 agaaccatggtcatcagtggtcaatcaaaagtcatcctacaaaataatttgaatcccnnnnnnntcttgatacggcggagcgggtctaagcattgtagag 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||    
T  21660339 agaaccatggtcatcagtggtcaataaaaagtcatcctacaaaataatttgaatcccaaaaaaaacttgatatggcggagcgggtctaagcattgtagag 21660240  T
Q  108 aggaaattcgaagattataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  21660239 aggaaattcgaagattataaaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtct 21660156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 8 - 191
Target Start/End: Complemental strand, 21669103 - 21668920
Alignment:
Q  8 agaaccatggtcatcagtggtcaatcaaaagtcatcctacaaaataatttgaatcccnnnnnnntcttgatacggcggagcgggtctaagcattgtagag 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||    
T  21669103 agaaccatggtcatcagtggtcaataaaaagtcatcctacaaaataatttgaatcccaaaaaaaacttgatatggcggagcgggtctaagcattgtagag 21669004  T
Q  108 aggaaattcgaagattataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  21669003 aggaaattcgaagattataaaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtct 21668920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 51948480 - 51948555
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||| ||||||||||  ||||||||||||||||||||||| ||||||||| | |||||||||||| | ||||||||    
T  51948480 aacccacttgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaatt 51948555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 28635696 - 28635767
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||| ||||||||||  ||||| ||| ||||||||||||||||||||||||| |||| ||||||||| ||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttc 28635767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 24827823 - 24827889
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| |||| |||||||| ||| |||||||||||||| ||||||||| |||| ||||||||||||    
T  24827823 taaacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtct 24827889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 9241101 - 9241037
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| |||||| |||||||||||| ||||||||| | ||||||||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtct 9241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 19238653 - 19238589
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| |||||| |||||||  ||||||||||||| ||||||||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtct 19238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 39509070 - 39509134
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||  | ||| || |||||||||||||||||||||| ||||||||||||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtct 39509134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 47044717 - 47044781
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||| |||| ||||| |||||||||||||||||| |||| ||||| ||||||||||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtct 47044781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 51250599 - 51250547
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    ||||| ||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctc 51250547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 56236981 - 56236940
Alignment:
Q  137 ggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  56236981 ggttggtctggtggtattgacttgggatatgggagtgtgctc 56236940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 37109427 - 37109363
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| || || |||||| ||||||| |||||||||||||| ||||| ||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 37109363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 43728402 - 43728470
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||| |||| ||||||||||  ||||||||||||||||| ||||| | |||| | ||||||||    
T  43728402 ttgggttggtatggtggtattgacttatgatctgggagtgtgctcctcctcaaagtctcaggttcaatt 43728470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 55427276 - 55427212
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| |||||| ||||||| |||||||| ||||| | ||||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtct 55427212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 12821968 - 12822019
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    |||| ||| |||||||| ||||  ||||||||||||||||||||||||||||    
T  12821968 aacccactagggttggtttggtgatattgacttgggatctgggagtgtgctc 12822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 14451821 - 14451747
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||| ||||||||||||  ||| || |||||||||||| || |||||||||| ||||| |||||||| ||||||||    
T  14451821 aacccacttgggttggttcggtggt-ttgacttgggatatgagagtgtgctcctcctcaaggtcttaggttcaatt 14451747  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 52254485 - 52254418
Alignment:
Q  122 ttataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    ||||||| | ||||| ||||||||| | ||||||||||||||| || |||||||||| |||| |||||    
T  52254485 ttataaatccacttgagttggtctgatggtattgacttgggatatgagagtgtgctcctccttgaggt 52254418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 13901747 - 13901817
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||||||| || |||||| |||| || ||||||||||| || |||| ||||||| | ||||||||    
T  13901747 acttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtctcaagttcaatt 13901817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 25869648 - 25869582
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    ||||||||| || || | ||||||||||| |||||| |||||||||| ||||| | |||||||||||    
T  25869648 acttgggttagtttgatggtattgacttgagatctgagagtgtgctcctcctcaaagtcttatgttc 25869582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 27965587 - 27965537
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgc 176  Q
    ||||| ||||||||||| || || |||||| ||||||||||||||||||||    
T  27965587 aaacccacttgggttggcctagtggtattggcttgggatctgggagtgtgc 27965537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 17618299 - 17618352
Alignment:
Q  145 tggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||| |||||| |||| || |||||||||||||| |||||||||||| ||||||    
T  17618299 tggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttc 17618352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 19680866 - 19680793
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||||| |||||| |||| || || |||||  |||||||  ||||||||||||||||||| |||||||| ||||    
T  19680866 taaacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttc 19680793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 38869791 - 38869832
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| |||||||||||||||||||||| ||||| ||||||    
T  38869791 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 38869832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 49582206 - 49582255
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgc 176  Q
    |||| |||||||||||||||||  |||||| |||||||||| ||||||||    
T  49582206 aacctacttgggttggtctggtgatattgatttgggatctgagagtgtgc 49582255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 5795485 - 5795421
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||||| || ||||||||| | || ||||| ||||| ||||| ||||||    
T  5795485 aacccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtct 5795421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 7292869 - 7292817
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||||||||||||| || |||||| ||||| | |||||||||||||| |||||    
T  7292869 acttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctc 7292817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 31759734 - 31759670
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||||||| ||| || |||||| |||||||  ||||||||||||| ||||| ||||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31759670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 37274536 - 37274464
Alignment:
Q  127 aaccgacttgggttggtctggtagta-ttgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||| ||||||||||| || || ||| ||| ||||||| |||||||||||||| ||||| |||||||| ||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttc 37274464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 37720291 - 37720227
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtc 190  Q
    ||||| ||||||||||| |||||  ||||| ||||||| |||||||||||| | ||||| |||||    
T  37720291 aaacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtc 37720227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 42644965 - 42644929
Alignment:
Q  148 tagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  42644965 tagtattgacttgggatctgagagtgtgttcttcctc 42644929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 46295097 - 46295161
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||| ||||||||||||||| ||| |||||||  | ||||||||||| ||||| ||||||    
T  46295097 aacccacttaggttggtctggtagtgttggcttgggacattggagtgtgctcctcctcaaggtct 46295161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 14495874 - 14495817
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  14495874 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtct 14495817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 1410728 - 1410671
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtct 1410671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 16773807 - 16773871
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtct 16773871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 30883277 - 30883199
Alignment:
Q  124 ataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||| |||||||||||||| || |||||| ||||||| |||||||||||||| ||||| |||||| | ||||||||    
T  30883277 ataaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaatt 30883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 43241753 - 43241683
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||||||| || ||||||||||||||||| ||||||||| |||||| ||||||| | ||||||||    
T  43241753 acttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggtctcaggttcaatt 43241683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 34984805 - 34984877
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    ||||| |||||||||||||| || |||||| ||||| | |||||||||||||| ||||| |||||||| ||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttc 34984877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 16457810 - 16457885
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||| |||| |||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||| ||||||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaatt 16457885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 29075781 - 29075852
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||| ||||||||| | || || |||||| |||||||||||||||||||||| |||||||| ||| ||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttc 29075852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 29692455 - 29692405
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||| |||||    
T  29692455 ttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctc 29692405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 87503 - 87435
Alignment:
Q  123 tataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||| |||| |||||| || || |||||| ||||| |||||||||||||||| ||||| ||||||    
T  87503 tataaacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtct 87435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 6844729 - 6844793
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| | ||| |||||||||||| || |||||||||| || ||||||||||||    
T  6844729 aacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtct 6844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 8278351 - 8278291
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    |||| ||||||||||||||| | |||||| |||||||  ||||||||||||| ||||||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgag 8278291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 12883871 - 12883915
Alignment:
Q  158 ttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||    
T  12883871 ttgggatctgggagtgtgctcctccttgaggtctcatgttcaatt 12883915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 30109388 - 30109320
Alignment:
Q  123 tataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||| |||||||||||  |||| |||||| |||| || |||||||||||||| |||| |||||||    
T  30109388 tataaacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtct 30109320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 15641845 - 15641808
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  15641845 gtattgacttgggacctgggagtgtgctcgtcctcgag 15641808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 9842898 - 9842858
Alignment:
Q  151 tattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||||||  ||||||||||||| ||||||||||||    
T  9842898 tattgacttgggacttgggagtgtgctcctcctcgaggtct 9842858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 21549213 - 21549157
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcct 183  Q
    |||| ||||||||||| || || |||||| ||||||| |||||||||||||| ||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 21549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 21589288 - 21589352
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| |||||| ||||||| |||||||| ||||  ||||||| ||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtct 21589352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 24652864 - 24652916
Alignment:
Q  123 tataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtg 175  Q
    |||||||  |||||| |||||||||| ||||||||||| ||| ||||||||||    
T  24652864 tataaactcacttggattggtctggtggtattgacttgagatttgggagtgtg 24652916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 8e-20; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 4844580 - 4844523
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtct 4844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 4870276 - 4870219
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtct 4870219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 2667869 - 2667926
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtct 2667926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 36720379 - 36720443
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    |||||| ||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||    
T  36720379 taaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggt 36720443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 31520682 - 31520615
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtctta 193  Q
    ||||| ||||||||||| ||||| | |||| |||||||||||||||||||||| ||||||||||||||    
T  31520682 aaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtctta 31520615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 13808956 - 13808886
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||| ||||| |||||| | ||||||||    
T  13808956 acttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaatt 13808886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 10499186 - 10499121
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| ||||||||||| ||||| |||||| |||||||||||||||| |||||||||| |||||||    
T  10499186 aaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtct 10499121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 17554778 - 17554828
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||||||||| |||| |||||| ||||||| ||||||||||||||||||||    
T  17554778 ttgggttggtttggtggtattggcttgggacctgggagtgtgctcttcctc 17554828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 31789046 - 31788984
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    |||| ||||||||||| || ||  ||||| |||||||||||||||||||||| ||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggt 31788984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 5499484 - 5499427
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcct 183  Q
    ||||| ||||||||||| ||||| ||||||||||| |||||| |||||||||| ||||    
T  5499484 aaacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctcct 5499427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 16991549 - 16991606
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||| ||||| |||||| |||||||||||||||||| |||||| | |||||||    
T  16991549 ttgggttggcctggtggtattggcttgggatctgggagtgtactcttctttgaggtct 16991606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 203090 - 203146
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcct 183  Q
    |||| ||||||||||| || || |||||||||||||||| ||||||||||| |||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatcagggagtgtgcttttcct 203146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 2597296 - 2597232
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||||| |||||| ||| |||| | ||||||||||| |||| |||||||    
T  2597296 aacccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtct 2597232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 12761520 - 12761560
Alignment:
Q  135 tgggttggtctggtagtattgacttgggatctgggagtgtg 175  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  12761520 tgggttggtctggtggtattgacttgggacctgggagtgtg 12761560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 28531111 - 28531059
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||| |||||||||||||||| ||||| |||||||||||||| | ||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtcttaggctcaatt 28531059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 4222141 - 4222212
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||| |||||||||||  | || |||||| |||||||||||||||||||||| ||||| | |||||| ||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttc 4222212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 42430335 - 42430385
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    |||| ||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  42430335 aacccacttgggttgg-ctggtggtattgacttgggatcttggagtgtgctc 42430385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 46518627 - 46518690
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    ||||| |||||||||||  | || |||||| |||||||||||||||||||||| ||||| ||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggt 46518690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 47454688 - 47454629
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||| ||| || |||||| |||| ||||| ||||||||||| ||||||||||||    
T  47454688 acttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtct 47454629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 49494217 - 49494158
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||| | || || |||||||||||  || ||||||||||||||||||||||||||    
T  49494217 acttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtct 49494158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 8051212 - 8051278
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||||| ||||| |||||| ||||||| |||| ||| ||||  ||||||||||||    
T  8051212 taaacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtct 8051278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 11090217 - 11090175
Alignment:
Q  151 tattgacttgggatctgggagtgtgctcttcctcgaggtctta 193  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggtctta 11090175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 30311304 - 30311370
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| || |||||||| || || |||| | |||||||||||||||||||||| ||||| ||||||    
T  30311304 taaacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtct 30311370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 44743901 - 44743867
Alignment:
Q  157 cttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||||||||||||||| ||||||||||||    
T  44743901 cttgggatctgggagtgtgctcctcctcgaggtct 44743867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 51766896 - 51766957
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    |||| ||||||||| ||| | | |||||||||||| |||||||||||||||||||||| ||||    
T  51766896 aacccacttgggttagtccgatggtattgacttgg-atctgggagtgtgctcttcctcaaggt 51766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 53412950 - 53413020
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||||||| || |||||| ||||  | |||||||||||||| ||||| |||||| | ||||||||    
T  53412950 acttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaatt 53413020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 7673279 - 7673340
Alignment:
Q  137 ggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||||||||||| ||||||||||||||| ||| ||||||||  | ||| |||||||| ||||    
T  7673279 ggttggtctggtggtattgacttgggatttggaagtgtgcttattctcaaggtcttaggttc 7673340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 9557319 - 9557380
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    ||||| ||||| | ||| ||| |||||||| ||||||||||| |||||||||| ||||||||    
T  9557319 aaacccacttgagctggcctgatagtattggcttgggatctgagagtgtgctcctcctcgag 9557380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 17034993 - 17035034
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtg 173  Q
    |||||||||| |||||| |||||||||||||||||| |||||    
T  17034993 acttgggttgctctggtggtattgacttgggatctgagagtg 17035034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 21960558 - 21960615
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||  ||||| |||||| ||||||| ||| |||||||||| ||||||||||||    
T  21960558 ttgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtct 21960615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 51903931 - 51903890
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| |||||||||||||||||||||| |||||| |||||    
T  51903931 gtattggcttgggatctgggagtgtgctcctcctcgtggtct 51903890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 7975448 - 7975484
Alignment:
Q  157 cttgggatctgggagtgtgctcttcctcgaggtctta 193  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  7975448 cttgggatctgggagtgtgctcctcctcaaggtctta 7975484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 11612307 - 11612355
Alignment:
Q  135 tgggttggtctggtagtattgacttgggatctgggagtgtgctcttcct 183  Q
    |||||||| ||||| ||||| |||||||| |||||||||||||| ||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctcct 11612355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 17108974 - 17108910
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||| || |||| ||||||||| | ||| ||||||||||||| ||||| ||||||    
T  17108974 aacccacttgggttagtttggtggtattgactggagatgtgggagtgtgctcctcctcaaggtct 17108910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 30194981 - 30195045
Alignment:
Q  138 gttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||||| ||||||  || |||  ||||||||||||| ||||||||||||||  |||||||    
T  30194981 gttggtctggtggtattggtttaggacttgggagtgtgctcatcctcgaggtcttagattcaatt 30195045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 38550473 - 38550405
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||| ||| | |||||||||| || | ||||||||||||| |||| ||||||| | ||||||||    
T  38550473 ttgggttggcctgttggtattgacttagggtttgggagtgtgctcctccttgaggtctgaggttcaatt 38550405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 33549103 - 33549168
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| ||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||    
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtct 33549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 31623069 - 31623003
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||||||| ||| |||||| ||||||| |||||||||||||| ||||||||||||    
T  31623069 taaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtct 31623003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 30127400 - 30127464
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||||| |||||| |||||| ||||||||||||||| || |||||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtct 30127464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 24641259 - 24641204
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    |||||||||  |||| ||||||||||||||||||||||||||||| ||||||||||    
T  24641259 ttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcctcgaggt 24641204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 9433643 - 9433606
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9433643 gtattgacttgggatctgggagtgtgctcttcctcgag 9433606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 6776678 - 6776619
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||| ||||| |||||| ||||||||||||| |||||||| ||||||| ||||    
T  6776678 acttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtct 6776619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 11423572 - 11423630
Alignment:
Q  133 cttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||| ||||||||||||||| ||||||| ||||  ||||||||||||    
T  11423572 cttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtct 11423630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 12234585 - 12234519
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| |||| |||||| ||||| |||||||||||||| ||||||||||||||   ||||||||||    
T  12234585 taaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtct 12234519  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 32613211 - 32613165
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  32613211 acttgggttggcctggtggtattgacttggggtctgggagtgtgctc 32613165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 12188380 - 12188317
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    ||||| ||||||||||| || || |||||| ||||||| |||||||||||||| ||||| ||||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 12188317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 13441055 - 13441102
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctct 179  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||||||||    
T  13441055 acttgggttggtcgggtggtattggcttgggacctgggagtgtgctct 13441102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 21943480 - 21943429
Alignment:
Q  151 tattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||||||| ||| ||||||| ||||||||||||||| | ||||||||    
T  21943480 tattgacttgggacctgagagtgtgttcttcctcgaggtctaaggttcaatt 21943429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 14557962 - 14558019
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||| ||||||||||||||||| || ||| ||||||| |||| ||||||||| |||||    
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctc 14558019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 15399 - 15335
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtct 15335  T

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Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 22760863 - 22760927
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtct 22760927  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 17041094 - 17041024
Alignment:
Q  121 attataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||| |||||||||||||| || | |||| |||||||||||| ||||||||| ||||| ||||||    
T  17041094 attataaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtct 17041024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 23595734 - 23595791
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||    
T  23595734 acttgggttggtctggtggtattgacttgagatctcggagtgtgctcctcctcaaggt 23595791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 23301678 - 23301614
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| ||||||||||||||  ||||||||||||| |||| |||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtct 23301614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 48771938 - 48772002
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||||||||  |||| |||||| |||||||||||||||||||||| |||| |||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtct 48772002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 2446307 - 2446368
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    ||||| ||||||||||||||| | |||||| |||||||  ||||||||||||| ||||||||    
T  2446307 aaacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgag 2446368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 19553460 - 19553528
Alignment:
Q  133 cttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||| ||||| |||||| ||||| | |||||||||||||| ||||| |||||||| ||||||||    
T  19553460 cttgggttggcctggtggtattggcttgg-acctgggagtgtgctcctcctcaaggtcttaggttcaatt 19553528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 23552117 - 23552182
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| ||||||||||| || ||  ||||||||||||| |||||||||||||| ||||| ||||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtct 23552182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 42836077 - 42836020
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||| ||||||||||| || || |||||| ||||||| ||||||||||||||||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctc 42836020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 43215183 - 43215248
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| |||||||||||||| || |||||| ||||||| || ||||||||||| ||||| ||||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtct 43215248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 7801180 - 7801244
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||| |||| ||||| |||||||||||||| |||||||||||||| || || ||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtct 7801244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 15137553 - 15137617
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| ||| ||||||||||| | ||||||||||| ||||| ||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtct 15137617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 20335907 - 20335843
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||||||||||| |  |||||| |||||||  ||||||||||||| ||||||||||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtct 20335843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 25590611 - 25590675
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||  ||| | |||||| |||| ||||||||||||||||| ||||||||||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtct 25590675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 26459486 - 26459422
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| || || |||||| ||||||| |||||||||||||| ||||| ||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 26459422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 37085618 - 37085563
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    |||||||||  |||| |||||| |||||||| ||||||||||||| ||||||||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctcatcctcgaggt 37085563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 41519335 - 41519276
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||| || || ||||||||||||||| | ||||||||||| ||||| ||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtct 41519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 36803696 - 36803646
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||||||||||| || |||||||||||||| |||||||| ||||| |||||    
T  36803696 ttgggttggtctagtggtattgacttgggacctgggagtatgctcctcctc 36803646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 22932787 - 22932734
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctctt 180  Q
    |||| |||||||||||| |||| |||||| ||||||| ||||||||| ||||||    
T  22932787 aacccacttgggttggtatggtggtattggcttgggacctgggagtgcgctctt 22932734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 25021411 - 25021354
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||| ||||||||||| || || |||||| ||||||| |||||||||||||| |||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctc 25021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 45709777 - 45709720
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||| || || |||||  ||||||||||| |||||||||| ||||||||||||    
T  45709777 ttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtct 45709720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 4161295 - 4161339
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    ||||||||||||||| |||||| |||||||||| | |||||||||    
T  4161295 ttgggttggtctggtggtattggcttgggatcttgaagtgtgctc 4161339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 21854553 - 21854605
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    ||||||||||| ||| | |||||| || ||||||||||||||||||| |||||    
T  21854553 acttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctc 21854605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 26703149 - 26703189
Alignment:
Q  151 tattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggtct 26703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 28236653 - 28236593
Alignment:
Q  131 gacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||| | || | |||||| ||||||| ||||||||| |||| ||||||||||||    
T  28236653 gacttgggttgatttgatggtattggcttgggacctgggagtgcgctcctcctcgaggtct 28236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 33362639 - 33362707
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||| |||| ||||||||||| ||| || || ||||||| |||||||||| | | ||||||||    
T  33362639 ttgggttggtatggtggtattgacttgagatttgagaatgtgctcctcctcgaggtttgaggttcaatt 33362707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 15786391 - 15786332
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||    
T  15786391 acttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtct 15786332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 40257396 - 40257474
Alignment:
Q  124 ataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||| ||||||||||| ||||| |||||| |||| || |||||||||||||| |||||||||||| | ||||||||    
T  40257396 ataaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaatt 40257474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 25297771 - 25297836
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| |||||||||||||| || |||||||||| ||||||| |||||||||| ||||||||||||    
T  25297771 aaacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtct 25297836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 8904410 - 8904478
Alignment:
Q  123 tataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||| ||||||||||| || |||||||||||||||||| || |||||||||| ||||| ||||||    
T  8904410 tataaacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtct 8904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 42412757 - 42412681
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||| ||||||||||| | ||| |||| | |||| ||||||||||||||||||||||| || ||||||||||||||    
T  42412757 taaaccaacttgggttggcccggtggtatgg-cttgagatctgggagtgtgctcttcctcaagatcttatgttcaatt 42412681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 11687702 - 11687626
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaat 201  Q
    |||||| |||||||||||||  || | ||||||||||||||||| ||||||||| |  ||||||||| |||||||||    
T  11687702 taaacccacttgggttggtccagtggcattgacttgggatctggaagtgtgctccttttcgaggtctcatgttcaat 11687626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 44126400 - 44126459
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||| ||||| |||||||| ||||| |||||||||||||| ||| ||||||||    
T  44126400 acttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtct 44126459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 9964462 - 9964495
Alignment:
Q  151 tattgacttgggatctgggagtgtgctcttcctc 184  Q
    ||||||||||||||||||||||||||||||||||    
T  9964462 tattgacttgggatctgggagtgtgctcttcctc 9964495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 41508830 - 41508895
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| ||||||||||| ||||| ||| ||  ||||||||||||||||||||| ||||| ||||||    
T  41508830 aaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtct 41508895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 51814493 - 51814558
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| ||||||||||| ||| | ||||||||||| |||||| |||||||||| ||||| ||||||    
T  51814493 aaacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtct 51814558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 12587294 - 12587334
Alignment:
Q  151 tattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtct 12587334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 19528403 - 19528339
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| |||||| ||||||||||  |||||||||| ||||| ||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtct 19528339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 21547558 - 21547494
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    |||||||||||||||||| || || |||||| |||||||  |||||| |||||| ||||||||||    
T  21547558 taaaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggt 21547494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 9165271 - 9165196
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||| ||||||||||| || || |||||| ||||||| |||||||||||||| ||||| | |||| | ||||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaatt 9165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 17439944 - 17439987
Alignment:
Q  154 tgacttgggatctgggagtgtgctcttcctcgaggtcttatgtt 197  Q
    |||||| |||||||||||||||||| |||||||||||| |||||    
T  17439944 tgacttaggatctgggagtgtgctcctcctcgaggtctcatgtt 17439987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 21268071 - 21268004
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtctt 192  Q
    |||||| ||||| ||||| || ||||||||| |||||||  ||||||||||||| ||||| |||||||    
T  21268071 taaacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggtctt 21268004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 26232457 - 26232398
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||||||| || |||||| |||| ||||||||||||||||| | || |||||||    
T  26232457 acttgggttggtctagtggtattggcttgagatctgggagtgtgctcctgcttgaggtct 26232398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 33700844 - 33700785
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||| || || |||||| ||||| |||||||||||||||| ||||| ||||||    
T  33700844 acttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtct 33700785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 2069663 - 2069728
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaa 200  Q
    ||||||||| ||||| ||||||||||||||||||| | ||||||| ||||||| |||| || |||||    
T  2069663 ttgggttggcctggttgtattgacttgggatctggca-tgtgctcctcctcgaagtctcatattcaa 2069728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 16170054 - 16169992
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggt 189  Q
    |||| ||||||||| | ||||| |||||||||||||| ||||||||||| || ||||| ||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggt 16169992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 17745327 - 17745261
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    ||||||||||| || || |||||| ||||||| ||| | |||||||| |||||||||||| ||||||    
T  17745327 acttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttc 17745261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 32916871 - 32916804
Alignment:
Q  133 cttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||||||| ||||||||||||| |||  | ||||||||||| ||||| |||||||| ||| ||||    
T  32916871 cttgggttggtctagtagtattgactttgga--ttggagtgtgctcctcctcaaggtcttaggtttaatt 32916804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 51703786 - 51703836
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||||||||||| || |||||| ||||| |||||||||||||||| |||||    
T  51703786 ttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctc 51703836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 952511 - 952568
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||| ||||| ||||||||||| || ||| ||||||| |||||||||||||| |||||    
T  952511 aacccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctc 952568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 6948147 - 6948078
Alignment:
Q  133 cttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||||| ||| |||||   |||  |||||||||||||||  |||||||||||| ||||||||||    
T  6948147 cttgggttggtcgggtggtattagtttgacatctgggagtgtgctgctcctcgaggtctcatgttcaatt 6948078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 27223183 - 27223142
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||| ||||||||||||||||||||| || ||||||    
T  27223183 gtattgacttaggatctgggagtgtgctcttcttcaaggtct 27223142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 36371469 - 36371534
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| ||||||||||| || || |||||| ||||| | |||||||||||||| ||||| ||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtct 36371534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 45235456 - 45235395
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    ||||| ||||||||||||||| | ||||||  ||||||  ||||||||||||| ||||||||    
T  45235456 aaacccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcctcgag 45235395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 1094525 - 1094589
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||||||||| || | |||||||||||| | ||| |||||||||| ||| ||||||||    
T  1094525 aacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtct 1094589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 11068912 - 11068868
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    |||||||| |||||| ||||||||||||||||  |||||||||||    
T  11068912 ttgggttgatctggtggtattgacttgggatccaggagtgtgctc 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 12370193 - 12370233
Alignment:
Q  157 cttgggatctgggagtgtgctcttcctcgaggtcttatgtt 197  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  12370193 cttgggacctgggagtgtgctcctcctcgaggtctcatgtt 12370233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 12662282 - 12662346
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||| | ||||||||||| |||  || ||||||||| ||||||| ||||    
T  12662282 aacctacttgggttggtctgatggtattgacttgtgatacggaagtgtgctcctcctcgatgtct 12662346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 31794340 - 31794276
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| || || |||||| |||||||  ||||||||||||| ||||| ||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 37046984 - 37047036
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    ||||| ||||||||||||||||| || ||| ||||||| || |||||||||||    
T  37046984 aaacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctc 37047036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 42983443 - 42983387
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtc 190  Q
    |||||||||  |||| ||||||||||| |||||||||||||| || |||| ||||||    
T  42983443 ttgggttggcatggtggtattgacttgagatctgggagtgtggtcctccttgaggtc 42983387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 52116850 - 52116782
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||| ||||| |||||| |||||||  ||||||||||||| ||||| | |||| | ||||||||    
T  52116850 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaatt 52116782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 39714991 - 39715056
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| |||||||||||  |||| |||||||||||||| |||||||||||||| ||||||||||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtct 39715056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 41202257 - 41202325
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||| ||||||| |||||| ||||||||    
T  41202257 ttgggttggtctggtggtattgacctgagatctgggagtatgctcctcctcgaagtcttaggttcaatt 41202325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 6760892 - 6760947
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||| || |||||    
T  6760892 acttgggttggtctggtagtattggtttgggatctgggagtatgctcctcatcgag 6760947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 34041666 - 34041600
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||||| || || |||||||||| ||||||| |||||||||| ||||| ||||||    
T  34041666 taaacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtct 34041600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 16918649 - 16918588
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtctta 193  Q
    ||||||||||| || || ||||||  ||||||||||||||||||||| ||||| ||||||||    
T  16918649 acttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtctta 16918588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 37480074 - 37480139
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||| ||||||||||| ||||| |||||| ||||||| ||| |||||||||| ||||| ||||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtct 37480139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 42602551 - 42602620
Alignment:
Q  124 ataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtctta 193  Q
    ||||||| ||||||||||| || || |||||| ||||||| |||||||||||||| | ||| ||||||||    
T  42602551 ataaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtctta 42602620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 1729814 - 1729882
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtctta 193  Q
    |||||| ||||||||||| || || |||||| |||||||  ||||||||||||| ||||| ||||||||    
T  1729814 taaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtctta 1729882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 5147755 - 5147691
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||||||||||| || ||||||||||| ||||||||||| ||||| | ||| ||||||    
T  5147755 aacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtct 5147691  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 19016031 - 19016095
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||| | |||||| |||| ||  ||||||||||||| ||||||||||||    
T  19016031 aacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtct 19016095  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 21213777 - 21213833
Alignment:
Q  135 tgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||||||||||| |||||| ||||||| ||||||||||| || |||| |||||||    
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtct 21213833  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 26545840 - 26545904
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||||||||||| |||| |||||  |||||||||||| ||||||||| | ||||||||||    
T  26545840 aacccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggtct 26545904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 28846691 - 28846755
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| |||| ||||| ||| || |||||||||||||| |||||||||||||| ||||||| ||||    
T  28846691 aacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtct 28846755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 29197453 - 29197381
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    ||||| |||||||||||  |||| ||||||||||||||  ||||||||||||| |||| || |||| ||||||    
T  29197453 aaacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttc 29197381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 42327471 - 42327407
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| || || |||||| ||||||| |||||||||||||| ||||| ||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 42327407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 42860348 - 42860412
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||| ||||| |||||  |||||||||| || |||||||||||||| ||||||||||||    
T  42860348 aacctacttgagttggcctggtgatattgacttgagacctgggagtgtgctcctcctcgaggtct 42860412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 29503268 - 29503335
Alignment:
Q  124 ataaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||| ||||||||||| || || ||||||  |||||| |||||||||||||| ||||| ||||||    
T  29503268 ataaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtct 29503335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 12994446 - 12994396
Alignment:
Q  133 cttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcct 183  Q
    |||| |||||||| || |||||||||||||| |||||||||||||| ||||    
T  12994446 cttgagttggtctagtggtattgacttgggacctgggagtgtgctcctcct 12994396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 7799112 - 7799051
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgag 187  Q
    ||||| ||||||||||  ||||| |||||| |||||||  ||||||||||||| ||||||||    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgag 7799051  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 19244109 - 19244173
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||||||  | |||||||||||||| ||| |||||||||| ||| | ||||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 19244173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 23361725 - 23361650
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||| ||||||||||  ||||| ||||||||||||||| ||||||||||||| ||||| |||||| | ||||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaatt 23361650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 16852338 - 16852404
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||||| || || |||||| ||||||| |||||||||||||| ||||||||||||    
T  16852338 taaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtct 16852404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 968362 - 968426
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||| ||||| ||||| |||||| ||||||| |||||||||||||| ||||||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtct 968426  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 10287484 - 10287550
Alignment:
Q  136 gggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||||||||||||||||||| ||||  |||||| ||||||||  |||||||||||| | ||||||||    
T  10287484 gggttggtctggtagtattggcttgaaatctggaagtgtgcttctcctcgaggtctcaggttcaatt 10287550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 28636412 - 28636362
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    ||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  28636412 ttgggttgacctgatagtattgacttgggatctgggagtgtactcttcctc 28636362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 28644146 - 28644096
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    ||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  28644146 ttgggttgacctgatagtattgacttgggatctgggagtgtactcttcctc 28644096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 28653098 - 28653048
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    ||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  28653098 ttgggttgacctgatagtattgacttgggatctgggagtgtactcttcctc 28653048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 35641979 - 35641913
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||||||||||| |||| | |||| ||| ||||||||||||| ||||||| ||||    
T  35641979 taaacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtct 35641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 28783059 - 28783131
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    ||||| |||||||||||  |||| |||||| |||| || |||||||||||||| ||||| |||||| ||||||    
T  28783059 aaacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttc 28783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 2203497 - 2203556
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||| || || |||||| ||||||| |||||||||||||| ||||| ||||||    
T  2203497 acttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 2203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 20994534 - 20994483
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctc 178  Q
    |||| ||||||||||| || || |||||||||||||| ||||||||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctc 20994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 29858120 - 29858061
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| |||| ||||| |||||| ||||||| | |||||||||||| ||||||||||||    
T  29858120 acttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtct 29858061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 4830486 - 4830560
Alignment:
Q  126 aaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaa 200  Q
    ||||| ||||||||||| ||||| |||||   |||||||||| ||||||| || |||||||||||| | ||||||    
T  4830486 aaacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggttcaa 4830560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 5264542 - 5264608
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||||| || || |||||| ||||| | |||||| ||||||| ||||||||||||    
T  5264542 taaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtct 5264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 19703565 - 19703499
Alignment:
Q  125 taaaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||||||||||| || || |||||| ||||||| ||| |||||||||| ||||| ||||||    
T  19703565 taaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtct 19703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 36205200 - 36205266
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    ||||||||||||||| |  |||||  ||| ||||||||||||||||| ||||| |||||| ||||||    
T  36205200 acttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttc 36205266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 11492126 - 11492078
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttc 198  Q
    |||||| |||| ||||||||||||||||| | |||||||||||| ||||    
T  11492126 gtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttc 11492078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 26688865 - 26688929
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||| ||||||||||| ||||| || ||| ||||||| || ||||||||||| ||||| ||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtct 26688929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 11534 - 11592
Alignment:
Q  133 cttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||| ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtct 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 41709 - 41634
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    |||| ||||||||||| || || |||||| |||| |||||| |||| ||||| |||||||||||| | ||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaatt 41634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 910 - 852
Alignment:
Q  133 cttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    |||||| ||| ||||| |||||| |||||||||||||| ||||||| ||||||| ||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtct 852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 95042 - 94972
Alignment:
Q  132 acttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtcttatgttcaatt 202  Q
    ||||||||||| || || |||||| ||||| | |||||||||||||| ||||| |||||| | ||||||||    
T  95042 acttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaatt 94972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 2539 - 2482
Alignment:
Q  134 ttgggttggtctggtagtattgacttgggatctgggagtgtgctcttcctcgaggtct 191  Q
    ||||||||||| ||| ||||||  || |||||||||||||||||| ||||| ||||||    
T  2539 ttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtct 2482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 5646 - 5682
Alignment:
Q  148 tagtattgacttgggatctgggagtgtgctcttcctc 184  Q
    |||||||||||||||||||| |||||| |||||||||    
T  5646 tagtattgacttgggatctgagagtgtactcttcctc 5682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 112282 - 112330
Alignment:
Q  127 aaccgacttgggttggtctggtagtattgacttgggatctgggagtgtg 175  Q
    |||| ||||||||||| ||||| |||||| ||||| |||||||||||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtg 112330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 157040 - 157000
Alignment:
Q  150 gtattgacttgggatctgggagtgtgctcttcctcgaggtc 190  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  157040 gtattggcttgagatctgggagtgtgctcctcctcgaggtc 157000  T

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