View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2853R-Insertion-20 (Length: 151)

Name: NF2853R-Insertion-20
Description: NF2853R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2853R-Insertion-20
NF2853R-Insertion-20
[»] chr4 (24 HSPs)
chr4 (11-151)||(243302-243442)
chr4 (98-144)||(56138315-56138361)
chr4 (98-144)||(958558-958604)
chr4 (29-103)||(4783581-4783655)
chr4 (98-144)||(34154392-34154438)
chr4 (98-144)||(34530759-34530805)
chr4 (98-144)||(39588129-39588175)
chr4 (98-144)||(44561294-44561340)
chr4 (98-150)||(1041998-1042050)
chr4 (27-87)||(19682191-19682251)
chr4 (32-108)||(21343433-21343509)
chr4 (32-108)||(33812881-33812957)
chr4 (26-78)||(51429392-51429444)
chr4 (98-144)||(4786298-4786344)
chr4 (98-144)||(6283431-6283477)
chr4 (98-144)||(51429293-51429339)
chr4 (98-144)||(56304913-56304959)
chr4 (27-108)||(28157514-28157595)
chr4 (98-142)||(29700268-29700312)
chr4 (24-108)||(36480596-36480680)
chr4 (32-104)||(40963749-40963821)
chr4 (32-78)||(28322206-28322252)
chr4 (32-78)||(40962892-40962938)
chr4 (98-144)||(42885512-42885560)
[»] scaffold0192 (2 HSPs)
scaffold0192 (27-108)||(18958-19039)
scaffold0192 (98-144)||(18863-18909)
[»] chr7 (23 HSPs)
chr7 (32-108)||(38488416-38488492)
chr7 (98-144)||(21188390-21188436)
chr7 (98-144)||(30355203-30355249)
chr7 (38-108)||(29097916-29097986)
chr7 (98-144)||(36394902-36394948)
chr7 (32-108)||(30468391-30468467)
chr7 (32-108)||(48901498-48901574)
chr7 (98-144)||(28980136-28980182)
chr7 (98-144)||(41047840-41047886)
chr7 (98-140)||(46863312-46863354)
chr7 (24-85)||(12081275-12081336)
chr7 (98-142)||(34139934-34139978)
chr7 (60-108)||(48589771-48589819)
chr7 (38-108)||(29113168-29113238)
chr7 (98-144)||(42682057-42682103)
chr7 (98-135)||(17838713-17838750)
chr7 (27-68)||(20353302-20353343)
chr7 (63-144)||(28115496-28115577)
chr7 (29-74)||(33603135-33603180)
chr7 (101-142)||(45364186-45364227)
chr7 (88-144)||(43686871-43686927)
chr7 (60-108)||(47521383-47521431)
chr7 (61-108)||(11886943-11886990)
[»] chr1 (22 HSPs)
chr1 (29-108)||(49502878-49502957)
chr1 (98-144)||(27487630-27487676)
chr1 (98-144)||(29763183-29763229)
chr1 (98-144)||(42572721-42572767)
chr1 (98-144)||(49395666-49395712)
chr1 (98-144)||(14174875-14174921)
chr1 (98-144)||(49927465-49927511)
chr1 (104-144)||(13972131-13972171)
chr1 (105-144)||(26637220-26637259)
chr1 (29-86)||(42572838-42572895)
chr1 (98-135)||(49426750-49426787)
chr1 (40-108)||(6328923-6328991)
chr1 (40-108)||(26769112-26769180)
chr1 (105-149)||(36908640-36908684)
chr1 (100-151)||(51269003-51269054)
chr1 (98-144)||(6434811-6434857)
chr1 (32-78)||(45780995-45781041)
chr1 (29-86)||(26637320-26637377)
chr1 (32-85)||(49502042-49502095)
chr1 (32-108)||(26607491-26607567)
chr1 (32-108)||(51461909-51461985)
chr1 (33-108)||(28456777-28456852)
[»] chr8 (18 HSPs)
chr8 (98-144)||(26451543-26451589)
chr8 (32-108)||(40745340-40745416)
chr8 (98-144)||(18441405-18441451)
chr8 (98-144)||(41858087-41858133)
chr8 (32-108)||(3695308-3695384)
chr8 (98-144)||(3395929-3395975)
chr8 (98-144)||(22547506-22547552)
chr8 (98-144)||(38871836-38871882)
chr8 (32-108)||(20854555-20854631)
chr8 (29-108)||(39583352-39583431)
chr8 (98-144)||(41274655-41274701)
chr8 (27-85)||(41858458-41858516)
chr8 (60-105)||(7120866-7120911)
chr8 (27-64)||(39582456-39582493)
chr8 (27-78)||(22960581-22960632)
chr8 (98-141)||(37779715-37779758)
chr8 (98-129)||(42602523-42602554)
chr8 (61-104)||(44885682-44885725)
[»] chr3 (23 HSPs)
chr3 (98-144)||(34694398-34694444)
chr3 (98-144)||(45101812-45101858)
chr3 (98-144)||(55207627-55207673)
chr3 (98-144)||(19454315-19454361)
chr3 (98-144)||(24703379-24703425)
chr3 (98-144)||(41803061-41803107)
chr3 (98-144)||(43568929-43568975)
chr3 (98-144)||(51402362-51402408)
chr3 (98-144)||(51696538-51696584)
chr3 (98-144)||(55385200-55385246)
chr3 (98-151)||(52570523-52570576)
chr3 (100-144)||(41137773-41137817)
chr3 (100-144)||(41577140-41577184)
chr3 (98-144)||(7245155-7245201)
chr3 (98-144)||(43476255-43476301)
chr3 (98-135)||(2271286-2271323)
chr3 (28-109)||(34645496-34645577)
chr3 (98-135)||(36134386-36134423)
chr3 (98-151)||(49609446-49609499)
chr3 (96-135)||(4004776-4004815)
chr3 (32-79)||(55282900-55282947)
chr3 (98-144)||(13896840-13896886)
chr3 (32-108)||(52514229-52514305)
[»] chr2 (16 HSPs)
chr2 (98-144)||(2920480-2920526)
chr2 (98-144)||(24512230-24512276)
chr2 (98-144)||(29093792-29093838)
chr2 (98-144)||(41500198-41500244)
chr2 (98-144)||(43491172-43491218)
chr2 (29-85)||(29905396-29905452)
chr2 (98-144)||(40679561-40679607)
chr2 (25-57)||(16327346-16327378)
chr2 (32-79)||(39185967-39186014)
chr2 (98-144)||(2648180-2648226)
chr2 (98-144)||(10365756-10365802)
chr2 (59-88)||(16544336-16544365)
chr2 (60-108)||(26544048-26544096)
chr2 (30-78)||(33001923-33001971)
chr2 (29-57)||(40055312-40055340)
chr2 (29-68)||(40055613-40055652)
[»] chr6 (13 HSPs)
chr6 (32-108)||(32552433-32552509)
chr6 (29-105)||(30258377-30258453)
chr6 (98-144)||(12783921-12783967)
chr6 (98-144)||(29061333-29061379)
chr6 (98-144)||(29065791-29065837)
chr6 (98-144)||(29074804-29074850)
chr6 (98-144)||(29079568-29079614)
chr6 (98-144)||(29107377-29107423)
chr6 (98-142)||(32034358-32034402)
chr6 (32-78)||(455407-455453)
chr6 (98-144)||(13401549-13401595)
chr6 (29-74)||(8193303-8193348)
chr6 (32-108)||(456100-456176)
[»] chr5 (9 HSPs)
chr5 (98-144)||(542754-542800)
chr5 (98-144)||(18307317-18307363)
chr5 (98-144)||(20192416-20192462)
chr5 (98-144)||(42865768-42865814)
chr5 (32-108)||(8679501-8679577)
chr5 (28-108)||(18155501-18155580)
chr5 (98-144)||(25497574-25497620)
chr5 (98-144)||(35564324-35564370)
chr5 (98-135)||(11346070-11346107)
[»] scaffold0199 (1 HSPs)
scaffold0199 (98-135)||(12361-12398)
[»] scaffold0176 (1 HSPs)
scaffold0176 (98-142)||(859-903)
[»] scaffold0283 (1 HSPs)
scaffold0283 (61-104)||(1676-1719)


Alignment Details
Target: chr4 (Bit Score: 125; Significance: 1e-64; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 243442 - 243302
Alignment:
Q  11 tttctcactttactttatgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccgagg 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  243442 tttctctctttactttatgaaaattgttgttgacacatatgcaaaggccgagaaacacgagtaatttatctaaatatctctcagcagttaactgtcgagg 243343  T
Q  111 atcttctgttacaaatctggcagaagctctctcactcatta 151  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  243342 atcttctgttacaaatctggcagaagctctctcactcatta 243302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 56138315 - 56138361
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  56138315 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 56138361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 958604 - 958558
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  958604 ttaactgccgaggatcttctgctacaaatccggcagaagctctctca 958558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 4783581 - 4783655
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaact 103  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||   ||||| ||||| ||| ||||||    
T  4783581 gaaaattgttgttgacacaaatgcaaaggctgagaaacacgagtaatttactcaaatacctctcggcagttaact 4783655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 34154438 - 34154392
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||    
T  34154438 ttaactgcagaggatcttctgctacaaatctggcagaagctctctca 34154392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 34530805 - 34530759
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  34530805 ttaactgccgaggatcttctgctacaaatttggcagaagctctctca 34530759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 39588129 - 39588175
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  39588129 ttaactgccgaggatcttctgctacaaatatggcagaagctctctca 39588175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 44561340 - 44561294
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||    
T  44561340 ttaactgccgaggatcgtctgctacaaatctggcagaagctctctca 44561294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 1041998 - 1042050
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctcactcatt 150  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||    
T  1041998 ttaactgccgaggatcttctactacaaatctggcataagctctctcattcatt 1042050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 19682251 - 19682191
Alignment:
Q  27 atgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatat 87  Q
    |||||||||||||||| ||| ||||||||||  || ||| |||||||||||||||||||||    
T  19682251 atgaaaattgttgttgtcacgtatgcaaaggctgaaaaatacgagtaatttatctaaatat 19682191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 21343509 - 21343433
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||| ||||||||||||||||  || ||||||||||||||| ||||   ||||||||||| ||| |||||||||||    
T  21343509 aattgctgttgacacatatgcattggccgagaaacacgagtagtttactcaaatatctctcggcagttaactgccga 21343433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 33812957 - 33812881
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||  ||| |||||||| |||||||||| | |||| || ||| ||| |||||||||||    
T  33812957 aattgttgttgacacatatgcattggttgagaaacatgagtaatttacccaaatgtcactcggcagttaactgccga 33812881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 51429444 - 51429392
Alignment:
Q  26 tatgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaattta 78  Q
    |||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  51429444 tatgaaaattgttgttaacacatatgcaaaggctgagaaacaccagtaattta 51429392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 4786344 - 4786298
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  4786344 ttaactgccgatgatcttctgctacaaatctggtagaagctctctca 4786298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 6283477 - 6283431
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||    
T  6283477 ttaactgccgaggatcttctgcttcaaatctggccgaagctctctca 6283431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 51429339 - 51429293
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  51429339 ttaactgtcgaggatcttctgctacaaatctggaagaagctctctca 51429293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 56304913 - 56304959
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||| |||||||||| ||||| |||||||||||||||||||||||||    
T  56304913 ttaattgccgaggattttctgctacaaatctggcagaagctctctca 56304959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 28157514 - 28157595
Alignment:
Q  27 atgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||| |||||||||||||||||||| |  ||  ||||||||||||||||||||| ||||  | ||| ||| |||||||||||    
T  28157514 atgagaattgttgttgacacatatgtattggctgagaaacacgagtaatttatccaaatgcccctcggcaattaactgccga 28157595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 29700312 - 29700268
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctct 142  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||    
T  29700312 ttaattgccgatgatcttctgctacaaatctggcagaagctctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 36480680 - 36480596
Alignment:
Q  24 tttatgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||| ||||||||||||||||||||||  ||  || |||||| ||||||||||| |||| |  ||| ||| |||||||||||    
T  36480680 tttatgagaattgttgttgacacatatgcattggctgataaacacaagtaatttatccaaatgttcctcggcagttaactgccga 36480596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 40963821 - 40963749
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactg 104  Q
    ||||||||||||||||||||||  ||  || |||||| | |||||||| |||||||||||| ||| |||||||    
T  40963821 aattgttgttgacacatatgcattggctgataaacacaaataatttatttaaatatctctcggcagttaactg 40963749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 28322252 - 28322206
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaattta 78  Q
    ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  28322252 aattgttgttgacacatatgcattggctgagaaacacgagtaattta 28322206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 40962892 - 40962938
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaattta 78  Q
    ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  40962892 aattgttgttgacacatatgcattggctgagaaacacgagtaattta 40962938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 42885512 - 42885560
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaa--tctggcagaagctctctca 144  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  42885512 ttaactgccgatgatcttctgctacaaaaatctggcagaagctctctca 42885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 50; Significance: 6e-20; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 19039 - 18958
Alignment:
Q  27 atgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||||| ||||| ||| |||||| ||||    
T  19039 atgaaaattgttgttgacacatatgcaaaggctgagaaacaccagtaatttacctaaatacctctcggcagttaactaccga 18958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 18909 - 18863
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  18909 ttaactgtcgaggatcttctgctacaaatctggcagaagctttctca 18863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 5e-17; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 38488416 - 38488492
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | | ||| | | |||||||||||    
T  38488416 aattgttgttgacacatatgcaaaggttgagaaacacgagtaatttacctaaacacccctcggtaattaactgccga 38488492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 21188436 - 21188390
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  21188436 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 21188390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 30355249 - 30355203
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  30355249 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 30355203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 29097986 - 29097916
Alignment:
Q  38 tgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||  ||  ||||||||||||||||||||| ||||||| ||| ||| |||||||||||    
T  29097986 tgttgacacatatgcattggctgagaaacacgagtaatttatccaaatatccctcggcagttaactgccga 29097916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 36394948 - 36394902
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||    
T  36394948 ttaactaccgaggatcttctgctacaaatctggcagaagctctctca 36394902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 30468391 - 30468467
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||||||||||||||| |  || ||| |||||| |||||||||||||||||  |||| ||| |||||||||||    
T  30468391 aattgttgttgacacatatggattggccgaaaaacactagtaatttatctaaatacttctcggcatttaactgccga 30468467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 48901574 - 48901498
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||  ||  ||||||||||||||||||| | |||| |||||  ||| |||||||||||    
T  48901574 aattgttgttgacacatatgcattggctgagaaacacgagtaatttacccaaatgtctctaggcagttaactgccga 48901498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 28980182 - 28980136
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  28980182 ttaactgccgaggattttctgctacaaatctgacagaagctctctca 28980136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 41047840 - 41047886
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||    
T  41047840 ttaactgccgaggatcttctgctacaaatctggaggaagctctctca 41047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 46863354 - 46863312
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctct 140  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  46863354 ttaactgccgaagatcttctgctacaaatctggcagaagctct 46863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 12081336 - 12081275
Alignment:
Q  24 tttatgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaat 85  Q
    ||||||| |||||||||||||||||||| |  ||  ||||||||||||||||||||| ||||    
T  12081336 tttatgagaattgttgttgacacatatgtattggctgagaaacacgagtaatttatccaaat 12081275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 34139934 - 34139978
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctct 142  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  34139934 ttaactgccgaggatcttcctctacaaatctggcagaagctctct 34139978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 48589771 - 48589819
Alignment:
Q  60 gagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||| ||||||||||| |||||| || |||||||||||    
T  48589771 gagaaacacgagtaaattatctaaatacctctcaacagttaactgccga 48589819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 29113238 - 29113168
Alignment:
Q  38 tgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||  ||  |||||||| |||||||||||| ||||||| ||| ||| || ||||||||    
T  29113238 tgttgacacatatgcattggctgagaaacatgagtaatttatccaaatatccctcggcagtttactgccga 29113168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 42682057 - 42682103
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||||| ||| ||| |||||||    
T  42682057 ttaactgccgaggatcttctgctacaaatctagcataagttctctca 42682103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 17838713 - 17838750
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaa 135  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  17838713 ttaactgccgacgatcttctgctacaaatctggcagaa 17838750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 20353302 - 20353343
Alignment:
Q  27 atgaaaattgttgttgacacatatgcaaaggtcgagaaacac 68  Q
    |||||||||| ||||||||||||||||||||  |||||||||    
T  20353302 atgaaaattgatgttgacacatatgcaaaggctgagaaacac 20353343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 28115577 - 28115496
Alignment:
Q  63 aaacacgagtaatttatctaaatatctctcagcacttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||||||| | |||||||  || | | |||||||  |||| ||||||| ||||||||| ||| |||||||||||    
T  28115577 aaacacgagtaatttacccaaatatccttcggtagttaactgttgagggtcttctgctacaaatctagcataagctctctca 28115496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 33603135 - 33603180
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaa 74  Q
    |||| ||||||||||||||||||||||||  ||||||||| |||||    
T  33603135 gaaatttgttgttgacacatatgcaaaggctgagaaacacaagtaa 33603180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 45364227 - 45364186
Alignment:
Q  101 actgccgaggatcttctgttacaaatctggcagaagctctct 142  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  45364227 actgccgaggatcttcggctacaaatctggtagaagctctct 45364186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 43686927 - 43686871
Alignment:
Q  88 ctctcagcacttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| | |||||||||||| || ||||| |||||||||| || |||||||||||    
T  43686927 ctctcagtagttaactgccgagaattttctgctacaaatctgacataagctctctca 43686871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 47521383 - 47521431
Alignment:
Q  60 gagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||| ||||||  ||||| ||| |||||||||||    
T  47521383 gagaaacacgagtaatttacctaaatgcctctcggcagttaactgccga 47521431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 11886990 - 11886943
Alignment:
Q  61 agaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||||||||||||| | |||||||  |||||| |||||||||||    
T  11886990 agaaacacgagtaatttacccaaatatccttcagcaattaactgccga 11886943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 2e-16; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 49502957 - 49502878
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||||||||||||||||||||  ||  ||||||||||||||||||| | |||| |||||| ||| |||||||||||    
T  49502957 gaaaattgttgttgacacatatgcattggctgagaaacacgagtaatttacccaaatgtctctcggcaattaactgccga 49502878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 27487676 - 27487630
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  27487676 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 27487630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 29763229 - 29763183
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  29763229 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 29763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 42572767 - 42572721
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  42572767 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 42572721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 49395666 - 49395712
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  49395666 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 49395712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 14174921 - 14174875
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  14174921 ttaactgccgaggatcttctgctaaaaatctggcagaagctctctca 14174875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 49927511 - 49927465
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||    
T  49927511 ttaactaccgaggatcttctgctacaaatctggcagaagctctctca 49927465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 13972131 - 13972171
Alignment:
Q  104 gccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  13972131 gccgaggatcttctgctacaaatctggcagaagctctctca 13972171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 26637259 - 26637220
Alignment:
Q  105 ccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  26637259 ccgaggatcttctgctacaaatctggcagaagctctctca 26637220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 42572895 - 42572838
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaata 86  Q
    ||||||||||||||||||||||||||||   ||||||||| || |||||| |||||||    
T  42572895 gaaaattgttgttgacacatatgcaaagactgagaaacaccagcaatttacctaaata 42572838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 49426750 - 49426787
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaa 135  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  49426750 ttaactgccgaggatcttctgctacaaatctggcagaa 49426787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 6328991 - 6328923
Alignment:
Q  40 ttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||  ||  ||||| |||||||||||||||||||| | |||| ||| |||||||||||    
T  6328991 ttgacacatatgcatcggctgagaagcacgagtaatttatctaaatgtttctcggcagttaactgccga 6328923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 26769112 - 26769180
Alignment:
Q  40 ttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||  ||  |||||||||||||||||||   ||||||||||| ||| |||||||||||    
T  26769112 ttgacacatatgcattggctgagaaacacgagtaatttactcaaatatctctcggcagttaactgccga 26769180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 36908640 - 36908684
Alignment:
Q  105 ccgaggatcttctgttacaaatctggcagaagctctctcactcat 149  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||    
T  36908640 ccgaggagcttctgctacaaatctggcagaagctctctcattcat 36908684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 51269003 - 51269054
Alignment:
Q  100 aactgccgaggatcttctgttacaaatctggcagaagctctctcactcatta 151  Q
    |||| |||||||||||||| ||||||| | ||||||||||||||| ||||||    
T  51269003 aactaccgaggatcttctgctacaaatttagcagaagctctctcattcatta 51269054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 6434811 - 6434857
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||| ||||||||||| ||||||||||| |||||| ||||||    
T  6434811 ttaactgccaaggatcttctgctacaaatctggtagaagcactctca 6434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 45781041 - 45780995
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaattta 78  Q
    ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  45781041 aattgttgttgacacatatgcattggctgagaaacacgagtaattta 45780995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 26637377 - 26637320
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaata 86  Q
    |||||||| ||||| || ||||||| |||  ||||||||| |||||||||||||||||    
T  26637377 gaaaattgctgttggcatatatgcagaggctgagaaacaccagtaatttatctaaata 26637320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 49502042 - 49502095
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaat 85  Q
    ||||||||||||||||||||||  |  | |||||||||||||||||| ||||||    
T  49502042 aattgttgttgacacatatgcattgaccaagaaacacgagtaatttacctaaat 49502095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 26607567 - 26607491
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||  ||| |||||| |  ||||||||| ||||||  | ||| ||| |||||||||||    
T  26607567 aattgttgttgacacatatgcattggttgagaaagattagtaatttacctaaatgcccctcggcagttaactgccga 26607491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 51461985 - 51461909
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||| ||||||||||||||  ||  ||||||||||||||||||| | ||||  | ||| ||| |||||||||||    
T  51461985 aattgttattgacacatatgcattggctgagaaacacgagtaatttacccaaatgccactcggcagttaactgccga 51461909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 28456852 - 28456777
Alignment:
Q  33 attgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||||||||||||||||  ||  || ||||||||||||| || | ||||| | ||| ||| |||||||||||    
T  28456852 attgttgttgacacatatgcattggctgacaaacacgagtaatctacccaaatacccctcggcagttaactgccga 28456777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 9e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 26451543 - 26451589
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  26451543 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 26451589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 40745416 - 40745340
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||  || | |||||||||||||||||||| |||| || ||| ||| |||||||||||    
T  40745416 aattgttgttgacacatatgcattggccaagaaacacgagtaatttatccaaatgtccctcggcagttaactgccga 40745340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 18441451 - 18441405
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  18441451 ttaactgccgaggatcttctgctacaaatctggcagaaactctctca 18441405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 41858133 - 41858087
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  41858133 ttaactgtcgaggatcttctgctacaaatctggcagaagctctctca 41858087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 3695308 - 3695384
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||  ||  ||||||||||||||||||||| ||||  | ||| ||| |||||||||||    
T  3695308 aattgttgttgacacatatgcattggctgagaaacacgagtaatttatccaaatgcccctcggcagttaactgccga 3695384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 3395929 - 3395975
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  3395929 ttaactgccgaggatcttctgctacaaatatggcagaaactctctca 3395975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 22547506 - 22547552
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||    
T  22547506 ttaactaccgaggatcttctactacaaatctggcagaagctctctca 22547552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 38871836 - 38871882
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  38871836 ttaactgccaaggatcttctgctacaaatctggcaggagctctctca 38871882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 20854555 - 20854631
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||||| |||||| ||  ||||  ||||||||||||||||||||||| || || ||| ||| |||||||||||    
T  20854555 aattgttgttcacacatttgataaggctgagaaacacgagtaatttatctacatgtccctcggcagttaactgccga 20854631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 39583431 - 39583352
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||| ||||||||||||||||| |||||| |||||| |||||||| ||||  |||||||  ||  || |||||||||||    
T  39583431 gaaaactgttgttgacacatatgaaaaggttgagaaatacgagtaaattattcaaatatccatcgacagttaactgccga 39583352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 41274655 - 41274701
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||| |||||||  || ||||||||||||||||||||||    
T  41274655 ttaactgccgagaatcttctactataaatctggcagaagctctctca 41274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 41858458 - 41858516
Alignment:
Q  27 atgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaat 85  Q
    |||| ||||||||||||||||||| ||  ||  ||||||||||||||||||||| ||||    
T  41858458 atgagaattgttgttgacacatatacattggctgagaaacacgagtaatttatccaaat 41858516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 7120866 - 7120911
Alignment:
Q  60 gagaaacacgagtaatttatctaaatatctctcagcacttaactgc 105  Q
    |||||||||||||||||||||||||||||  || ||| ||||||||    
T  7120866 gagaaacacgagtaatttatctaaatatccttcggcagttaactgc 7120911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 39582456 - 39582493
Alignment:
Q  27 atgaaaattgttgttgacacatatgcaaaggtcgagaa 64  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  39582456 atgaaaattgttgttgacacatatgtaaaggttgagaa 39582493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 22960581 - 22960632
Alignment:
Q  27 atgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaattta 78  Q
    |||| |||||||||||||||||||| |  ||  |||||||||||||||||||    
T  22960581 atgagaattgttgttgacacatatgtattggatgagaaacacgagtaattta 22960632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 37779715 - 37779758
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctc 141  Q
    ||||||| ||||||| ||||| |||||||||| |||||||||||    
T  37779715 ttaactgtcgaggatattctgctacaaatctgacagaagctctc 37779758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 42602523 - 42602554
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctg 129  Q
    ||||||||||||||||||||| ||||||||||    
T  42602523 ttaactgccgaggatcttctgatacaaatctg 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 44885682 - 44885725
Alignment:
Q  61 agaaacacgagtaatttatctaaatatctctcagcacttaactg 104  Q
    ||||||||||||||||||| ||||||||| || ||| |||||||    
T  44885682 agaaacacgagtaatttatttaaatatctttcggcagttaactg 44885725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 9e-16; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 34694444 - 34694398
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  34694444 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 34694398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 45101858 - 45101812
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  45101858 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 45101812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 55207673 - 55207627
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  55207673 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 55207627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 19454361 - 19454315
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  19454361 ttaactgccgaggatcttctactacaaatctggcagaagctctctca 19454315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 24703425 - 24703379
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  24703425 ttaactgccgatgatcttctgctacaaatctggcagaagctctctca 24703379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 41803061 - 41803107
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||||||||| || |||||||||||||||||||||||||    
T  41803061 ttaactgccgaggatcttttgctacaaatctggcagaagctctctca 41803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 43568929 - 43568975
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  43568929 ttaactgctgaggatcttctgttacaaatctgacagaagctctctca 43568975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 51402408 - 51402362
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  51402408 ttaactgccgaggatcttctgctacaaatctgtcagaagctctctca 51402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 51696584 - 51696538
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  51696584 ttaactgccgaggatcttctgctgcaaatctggcagaagctctctca 51696538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 55385200 - 55385246
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  55385200 ttaactgtcgaggatcttctgctacaaatctggcagaagctctctca 55385246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 52570576 - 52570523
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctcactcatta 151  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||| ||||||    
T  52570576 ttaactgccgaggatcttctactacaaatctggcagaaactctctcattcatta 52570523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 41137773 - 41137817
Alignment:
Q  100 aactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  41137773 aactaccgaggatcttctgctacaaatctggcagaagctctctca 41137817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 41577140 - 41577184
Alignment:
Q  100 aactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  41577140 aactgccgaggatcttctgctacaaatcttgcagaagctctctca 41577184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 7245155 - 7245201
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||    
T  7245155 ttaactgccgagtatcttctgctacaaatctgacagaagctctctca 7245201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 43476255 - 43476301
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  43476255 ttaactgccgaggatcttttgctacaaatctgacagaagctctctca 43476301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 2271323 - 2271286
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaa 135  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  2271323 ttaactgccgaggatcttctgctacaaatctggcagaa 2271286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 34645496 - 34645577
Alignment:
Q  28 tgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccgag 109  Q
    ||||||||||||||||||||| | |   ||  ||||||||||||||||||| |||||||||  || ||| ||||||||||||    
T  34645496 tgaaaattgttgttgacacatttaccttggctgagaaacacgagtaatttacctaaatatccttcggcagttaactgccgag 34645577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 36134386 - 36134423
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaa 135  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  36134386 ttaactgccgaggatcttctgctacaaatctggcagaa 36134423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 49609446 - 49609499
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctcactcatta 151  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||| | ||||||    
T  49609446 ttaactgccgaggaacttctgctacaaatctggcataagctctcttattcatta 49609499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 4004815 - 4004776
Alignment:
Q  96 acttaactgccgaggatcttctgttacaaatctggcagaa 135  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  4004815 acttaactgccgaggatcttctgctacaaacctggcagaa 4004776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 55282947 - 55282900
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttat 79  Q
    |||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  55282947 aattgttgttgacatatatgcattggttgagaaacacgagtaatttat 55282900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 13896886 - 13896840
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||| ||| ||||  |||||||||||||||||||||||||    
T  13896886 ttaactgccgaagattttctactacaaatctggcagaagctctctca 13896840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 52514229 - 52514305
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||||||||||||||| |  ||  |||||||||||||||||||   ||||| | ||| ||| |||||||||||    
T  52514229 aattgttgttgacacatatgtattggctgagaaacacgagtaatttactcaaatacccctcggcaattaactgccga 52514305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 9e-16; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 2920526 - 2920480
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2920526 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 2920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 24512230 - 24512276
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  24512230 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 24512276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 29093838 - 29093792
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  29093838 ttaactgccgaggatcttctgctacaaatctggcagaagctctctca 29093792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 41500244 - 41500198
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  41500244 ttaactgccgaggatcttctgctacaaatctggcataagctctctca 41500198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 43491172 - 43491218
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  43491172 ttaactgccgagaatcttctgttataaatctggcagaagctctctca 43491218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 29905396 - 29905452
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaat 85  Q
    |||||||||||||||||||||||||  ||  ||||||||||||||||||||| ||||    
T  29905396 gaaaattgttgttgacacatatgcattggctgagaaacacgagtaatttatccaaat 29905452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 40679607 - 40679561
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  40679607 ttaactgccgaggatcttctgctacaaatctggaagaacctctctca 40679561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 16327346 - 16327378
Alignment:
Q  25 ttatgaaaattgttgttgacacatatgcaaagg 57  Q
    |||||||||||||||||||||||||||||||||    
T  16327346 ttatgaaaattgttgttgacacatatgcaaagg 16327378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 39185967 - 39186014
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttat 79  Q
    |||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  39185967 aattgttgttgacacatacgcattggttgagaaacacgagtaatttat 39186014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 2648180 - 2648226
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||| |||||| ||||||||| |||||||||||||||| ||||||||    
T  2648180 ttaattgccgatgatcttctgctacaaatctggcagaaactctctca 2648226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 10365802 - 10365756
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||| ||||||||||||| || ||||||||||||| |||||||||||    
T  10365802 ttaaatgccgaggatcttttgctacaaatctggcataagctctctca 10365756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 16544336 - 16544365
Alignment:
Q  59 cgagaaacacgagtaatttatctaaatatc 88  Q
    ||||||||||||||||||||||||||||||    
T  16544336 cgagaaacacgagtaatttatctaaatatc 16544365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 26544096 - 26544048
Alignment:
Q  60 gagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||| ||||| ||||| ||||| ||| |||||||||||    
T  26544096 gagaaacacgagtaaattatccaaatacctctcggcagttaactgccga 26544048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 33001923 - 33001971
Alignment:
Q  30 aaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaattta 78  Q
    ||||||||||| ||||||||||||  ||  |||||||||||||||||||    
T  33001923 aaaattgttgtcgacacatatgcattggctgagaaacacgagtaattta 33001971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 40055312 - 40055340
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaagg 57  Q
    |||||||||||||||||||||||||||||    
T  40055312 gaaaattgttgttgacacatatgcaaagg 40055340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 40055652 - 40055613
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacac 68  Q
    ||||||||||||||||||||||| |||||  |||||||||    
T  40055652 gaaaattgttgttgacacatatgtaaaggatgagaaacac 40055613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 32552433 - 32552509
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||  |||||||||| || ||||||||||| |||| || ||||||| |||| ||||||    
T  32552433 aattgttgttgacacatatgcattggtcgagaaaaacaagtaatttatccaaatgtccctcagcagttaattgccga 32552509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 30258453 - 30258377
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgc 105  Q
    |||||||||||| |||||||||| |||||| || |||||| ||||||||||| |||||||  || ||| ||||||||    
T  30258453 gaaaattgttgtcgacacatatggaaaggttgaaaaacacaagtaatttatccaaatatcattcggcagttaactgc 30258377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 12783967 - 12783921
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||||    
T  12783967 ttaactgccgaggatcttctgctacaaatctggaaaaagctctctca 12783921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 29061333 - 29061379
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||    
T  29061333 ttaacttccgaggatcttctgctacaaatctggtagaagctctctca 29061379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 29065791 - 29065837
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  29065791 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctca 29065837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 29074804 - 29074850
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  29074804 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctca 29074850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 29079568 - 29079614
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  29079568 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctca 29079614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 29107377 - 29107423
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  29107377 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctca 29107423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 32034402 - 32034358
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctct 142  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||    
T  32034402 ttaactgccgatgatcttctgctacaaatctggcagaagatctct 32034358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 455407 - 455453
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaattta 78  Q
    ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  455407 aattgttgttgacacatatgcattggctgagaaacacgagtaattta 455453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 13401549 - 13401595
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||| |||||||||||||| ||||||| || ||||||||||||||    
T  13401549 ttaactaccgaggatcttctgctacaaatatgacagaagctctctca 13401595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 8193348 - 8193303
Alignment:
Q  29 gaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaa 74  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||    
T  8193348 gaaaattgttgttgacacatatgagaaggttgagaaacaccagtaa 8193303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 456176 - 456100
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||| ||||||||||||||||  ||  ||||||||||||||||||| | ||||  | ||| ||| |||||||||||    
T  456176 aattgctgttgacacatatgcattggctgagaaacacgagtaatttacccaaatgcccctcggcagttaactgccga 456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 542800 - 542754
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  542800 ttaactgccgaggatcttctgctacaaatctggcagaagttctctca 542754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 18307317 - 18307363
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  18307317 ttaactgccgaggatcttctgctacaaatctggcagaagccctctca 18307363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 20192416 - 20192462
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||    
T  20192416 ttaaatgccgaggatcttctgctacaaatctggcagaagctctctca 20192462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 42865814 - 42865768
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||    
T  42865814 ttaattgccgaggatcttctgctacaaatctggcagaagctctctca 42865768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 8679501 - 8679577
Alignment:
Q  32 aattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||   |||| || ||| ||| |||||||||||    
T  8679501 aattgttgttgacacatatgcattggccgagaaacacgagtaatttactgaaatgtccctcggcagttaactgccga 8679577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 18155580 - 18155501
Alignment:
Q  28 tgaaaattgttgttgacacatatgcaaaggtcgagaaacacgagtaatttatctaaatatctctcagcacttaactgccga 108  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||| ||| | ||||||| ||| ||| |||||| ||||    
T  18155580 tgaaaattattgttgacacatatgcaaaggctgagaaacacgagtaaattagc-aaatatccctcggcagttaactaccga 18155501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 25497574 - 25497620
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||    
T  25497574 ttaactgccgagaatcttctgctacaaatcaggcagaagctctctca 25497620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 35564324 - 35564370
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctctca 144  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||||    
T  35564324 ttaactgctgaggatcttctgctacaaatctggcataagctctctca 35564370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 11346070 - 11346107
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaa 135  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  11346070 ttaactgtcgaggatcttctgctacaaatctggcagaa 11346107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 12398 - 12361
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaa 135  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  12398 ttaactgccgaggatcttctgctacaaatctggcagaa 12361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 859 - 903
Alignment:
Q  98 ttaactgccgaggatcttctgttacaaatctggcagaagctctct 142  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  859 ttaactgccgaggatcttcctctacaaatctggcagaagctctct 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 1719 - 1676
Alignment:
Q  61 agaaacacgagtaatttatctaaatatctctcagcacttaactg 104  Q
    ||||||||||||||||||| ||||||||| || ||| |||||||    
T  1719 agaaacacgagtaatttatttaaatatctttcggcagttaactg 1676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University