View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2853R-Insertion-4 (Length: 900)

Name: NF2853R-Insertion-4
Description: NF2853R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2853R-Insertion-4
NF2853R-Insertion-4
[»] chr4 (46 HSPs)
chr4 (125-899)||(10576802-10577577)
chr4 (483-714)||(33519561-33519791)
chr4 (42-603)||(34332655-34333215)
chr4 (486-708)||(4733239-4733459)
chr4 (486-669)||(17332004-17332188)
chr4 (486-685)||(39134145-39134344)
chr4 (481-668)||(31859247-31859434)
chr4 (486-641)||(34667292-34667451)
chr4 (495-676)||(7023593-7023774)
chr4 (518-778)||(29437873-29438146)
chr4 (551-663)||(1695327-1695437)
chr4 (478-569)||(26160417-26160508)
chr4 (478-641)||(21047790-21047953)
chr4 (543-668)||(5676767-5676891)
chr4 (548-692)||(19602328-19602471)
chr4 (517-668)||(47024141-47024290)
chr4 (530-685)||(26188311-26188464)
chr4 (515-679)||(18444770-18444931)
chr4 (486-668)||(32022333-32022514)
chr4 (549-669)||(9782521-9782639)
chr4 (487-630)||(9288538-9288681)
chr4 (708-784)||(26160259-26160335)
chr4 (478-650)||(22120257-22120427)
chr4 (548-660)||(12806378-12806488)
chr4 (517-660)||(10450870-10451011)
chr4 (478-598)||(23354194-23354312)
chr4 (710-784)||(31859477-31859552)
chr4 (542-667)||(16441632-16441755)
chr4 (593-655)||(17184088-17184150)
chr4 (555-663)||(17024355-17024461)
chr4 (708-789)||(21077711-21077792)
chr4 (100-168)||(7144169-7144237)
chr4 (9-45)||(10577576-10577612)
chr4 (485-537)||(25366924-25366976)
chr4 (517-655)||(27303312-27303447)
chr4 (709-782)||(12028483-12028556)
chr4 (549-660)||(51885210-51885319)
chr4 (552-654)||(18898579-18898679)
chr4 (288-371)||(21077990-21078072)
chr4 (547-649)||(10079587-10079689)
chr4 (547-641)||(13275147-13275241)
chr4 (517-615)||(22219325-22219422)
chr4 (531-655)||(24576925-24577045)
chr4 (549-602)||(24041826-24041879)
chr4 (591-652)||(25314704-25314765)
chr4 (304-369)||(31859091-31859155)
[»] chr7 (52 HSPs)
chr7 (42-709)||(5636740-5637407)
chr7 (326-691)||(18467061-18467427)
chr7 (412-654)||(11467359-11467605)
chr7 (488-676)||(5312138-5312325)
chr7 (549-651)||(2629947-2630047)
chr7 (546-693)||(9760651-9760797)
chr7 (486-666)||(19139314-19139494)
chr7 (486-666)||(20738713-20738893)
chr7 (517-641)||(26839591-26839713)
chr7 (591-709)||(9552680-9552799)
chr7 (531-665)||(21545260-21545391)
chr7 (511-640)||(7326369-7326497)
chr7 (517-653)||(7815898-7816032)
chr7 (548-640)||(9405280-9405370)
chr7 (546-654)||(3400417-3400524)
chr7 (517-660)||(7493862-7494003)
chr7 (531-678)||(20017547-20017692)
chr7 (530-634)||(30406182-30406285)
chr7 (547-709)||(9801076-9801237)
chr7 (559-663)||(7777524-7777626)
chr7 (527-643)||(23072919-23073034)
chr7 (489-635)||(10054294-10054439)
chr7 (577-709)||(4091936-4092067)
chr7 (488-669)||(12358236-12358414)
chr7 (604-693)||(17880417-17880506)
chr7 (542-655)||(23126711-23126822)
chr7 (515-599)||(2351638-2351722)
chr7 (43-169)||(6272196-6272324)
chr7 (530-709)||(24596397-24596576)
chr7 (487-640)||(21544253-21544400)
chr7 (549-649)||(20446807-20446905)
chr7 (549-669)||(21472355-21472473)
chr7 (487-640)||(21536909-21537059)
chr7 (566-652)||(315717-315801)
chr7 (518-685)||(15757983-15758147)
chr7 (546-680)||(22334702-22334835)
chr7 (531-651)||(20040227-20040345)
chr7 (566-668)||(7142625-7142725)
chr7 (555-652)||(7151466-7151561)
chr7 (106-152)||(18497054-18497100)
chr7 (546-641)||(11082144-11082235)
chr7 (531-651)||(20050380-20050498)
chr7 (485-646)||(23744526-23744686)
chr7 (714-766)||(5636669-5636721)
chr7 (105-273)||(11467061-11467229)
chr7 (708-776)||(24596589-24596657)
chr7 (714-749)||(21472264-21472299)
chr7 (78-169)||(22334285-22334376)
chr7 (123-169)||(30406639-30406685)
chr7 (714-751)||(20040419-20040456)
chr7 (714-751)||(20050572-20050609)
chr7 (708-785)||(22334878-22334955)
[»] chr8 (41 HSPs)
chr8 (289-708)||(12774028-12774442)
chr8 (427-670)||(28259841-28260081)
chr8 (326-784)||(28074935-28075410)
chr8 (487-708)||(6887564-6887784)
chr8 (483-670)||(23876518-23876700)
chr8 (478-709)||(5154309-5154537)
chr8 (478-709)||(30850406-30850633)
chr8 (375-520)||(14139752-14139897)
chr8 (481-680)||(27084925-27085121)
chr8 (485-654)||(13529473-13529642)
chr8 (485-654)||(13619012-13619181)
chr8 (546-692)||(18771484-18771629)
chr8 (478-678)||(28290718-28290914)
chr8 (524-703)||(24927249-24927430)
chr8 (518-709)||(11437933-11438122)
chr8 (546-685)||(24120818-24120953)
chr8 (549-649)||(29046726-29046824)
chr8 (532-668)||(32239839-32239973)
chr8 (409-592)||(35134862-35135047)
chr8 (550-660)||(13304983-13305091)
chr8 (495-602)||(14184562-14184668)
chr8 (551-641)||(30544335-30544424)
chr8 (542-709)||(24094693-24094856)
chr8 (106-371)||(28259539-28259802)
chr8 (547-662)||(12957090-12957204)
chr8 (542-668)||(15213173-15213297)
chr8 (591-685)||(16051760-16051855)
chr8 (517-655)||(28900714-28900849)
chr8 (489-692)||(29292406-29292606)
chr8 (545-650)||(13583029-13583133)
chr8 (74-166)||(13581946-13582038)
chr8 (517-646)||(11308221-11308348)
chr8 (201-362)||(6887297-6887457)
chr8 (567-668)||(22892678-22892779)
chr8 (89-168)||(8541721-8541800)
chr8 (606-678)||(23893663-23893735)
chr8 (74-166)||(24926781-24926873)
chr8 (203-238)||(35134691-35134726)
chr8 (716-778)||(30544180-30544242)
chr8 (714-751)||(26882745-26882782)
chr8 (326-367)||(35134820-35134861)
[»] chr1 (43 HSPs)
chr1 (412-706)||(31314083-31314376)
chr1 (114-610)||(23420645-23421136)
chr1 (478-656)||(19257314-19257490)
chr1 (41-481)||(34931905-34932347)
chr1 (532-709)||(50047622-50047799)
chr1 (530-685)||(11984622-11984776)
chr1 (542-685)||(34533189-34533331)
chr1 (40-344)||(33175580-33175881)
chr1 (478-714)||(14744799-14745030)
chr1 (531-678)||(30675992-30676137)
chr1 (521-712)||(15416431-15416620)
chr1 (518-685)||(21549208-21549370)
chr1 (532-685)||(11769405-11769557)
chr1 (591-786)||(25778179-25778389)
chr1 (517-663)||(12810740-12810883)
chr1 (499-635)||(34933397-34933537)
chr1 (532-707)||(23223915-23224087)
chr1 (489-757)||(25665148-25665430)
chr1 (549-663)||(26658070-26658181)
chr1 (481-678)||(52270575-52270770)
chr1 (591-667)||(15298333-15298409)
chr1 (488-630)||(13807178-13807320)
chr1 (623-709)||(25731011-25731098)
chr1 (595-677)||(23506343-23506425)
chr1 (714-784)||(27460476-27460546)
chr1 (75-168)||(19256933-19257025)
chr1 (517-601)||(23521122-23521204)
chr1 (555-668)||(26853748-26853859)
chr1 (708-772)||(26853914-26853978)
chr1 (549-602)||(24903227-24903278)
chr1 (591-668)||(23519198-23519275)
chr1 (558-602)||(18396101-18396145)
chr1 (546-668)||(9328573-9328693)
chr1 (78-181)||(14581153-14581256)
chr1 (334-385)||(26654508-26654559)
chr1 (716-786)||(15298472-15298542)
chr1 (714-776)||(21549102-21549164)
chr1 (485-630)||(25964715-25964861)
chr1 (77-167)||(30743499-30743589)
chr1 (289-371)||(31314417-31314498)
chr1 (547-647)||(9252084-9252182)
chr1 (285-362)||(23506465-23506541)
chr1 (708-785)||(25126893-25126970)
[»] chr3 (32 HSPs)
chr3 (39-694)||(26419299-26419955)
chr3 (478-709)||(21828550-21828781)
chr3 (481-681)||(14280644-14280841)
chr3 (517-680)||(8401795-8401955)
chr3 (478-661)||(11475439-11475620)
chr3 (492-669)||(21653948-21654125)
chr3 (490-639)||(23907651-23907799)
chr3 (521-708)||(19218587-19218772)
chr3 (544-712)||(10342287-10342455)
chr3 (531-670)||(27415692-27415829)
chr3 (547-685)||(19542510-19542647)
chr3 (517-646)||(33578358-33578487)
chr3 (546-685)||(19263304-19263443)
chr3 (541-708)||(26298313-26298479)
chr3 (533-707)||(2729000-2729169)
chr3 (518-709)||(18474737-18474928)
chr3 (555-641)||(28731053-28731138)
chr3 (513-691)||(22992066-22992245)
chr3 (710-752)||(11521658-11521700)
chr3 (617-675)||(22488356-22488414)
chr3 (487-640)||(5631972-5632125)
chr3 (578-670)||(18066243-18066334)
chr3 (714-797)||(11475289-11475372)
chr3 (269-372)||(21828362-21828464)
chr3 (552-650)||(25883651-25883747)
chr3 (514-647)||(11521775-11521905)
chr3 (716-766)||(22489679-22489729)
chr3 (531-668)||(33914006-33914140)
chr3 (591-668)||(21018176-21018253)
chr3 (40-121)||(11475955-11476037)
chr3 (728-790)||(22992297-22992359)
chr3 (550-584)||(27226876-27226910)
[»] chr6 (31 HSPs)
chr6 (422-667)||(16174645-16174890)
chr6 (501-661)||(30756219-30756382)
chr6 (481-709)||(26499208-26499434)
chr6 (487-680)||(32929826-32930021)
chr6 (39-672)||(16439919-16440544)
chr6 (486-670)||(10976424-10976608)
chr6 (489-670)||(9395954-9396136)
chr6 (478-589)||(1130226-1130336)
chr6 (531-668)||(17859883-17860019)
chr6 (542-714)||(13830316-13830491)
chr6 (517-651)||(15370060-15370193)
chr6 (517-650)||(15319421-15319553)
chr6 (511-652)||(15386496-15386636)
chr6 (549-648)||(9725606-9725703)
chr6 (530-680)||(13723268-13723415)
chr6 (487-578)||(13123584-13123676)
chr6 (523-692)||(15375988-15376156)
chr6 (517-653)||(15376317-15376452)
chr6 (517-709)||(22262914-22263104)
chr6 (558-660)||(15575529-15575629)
chr6 (599-685)||(16528210-16528296)
chr6 (709-794)||(12971945-12972030)
chr6 (542-693)||(15349267-15349414)
chr6 (518-685)||(1558228-1558392)
chr6 (543-682)||(12971774-12971909)
chr6 (531-673)||(19670017-19670157)
chr6 (532-668)||(30235775-30235907)
chr6 (710-786)||(17198401-17198477)
chr6 (511-604)||(22558817-22558910)
chr6 (85-167)||(17859081-17859163)
chr6 (624-693)||(15318618-15318687)
[»] chr2 (38 HSPs)
chr2 (487-709)||(17883924-17884144)
chr2 (258-537)||(31274495-31274773)
chr2 (521-685)||(9504472-9504635)
chr2 (521-685)||(9515838-9516001)
chr2 (495-705)||(21844191-21844398)
chr2 (470-666)||(21842535-21842732)
chr2 (478-640)||(21847810-21847975)
chr2 (524-685)||(18235707-18235867)
chr2 (487-641)||(24047938-24048094)
chr2 (532-685)||(27416665-27416816)
chr2 (478-709)||(18819214-18819441)
chr2 (551-669)||(25474579-25474695)
chr2 (481-660)||(14921444-14921619)
chr2 (617-757)||(31274322-31274460)
chr2 (488-666)||(29769682-29769860)
chr2 (551-670)||(18532962-18533079)
chr2 (530-693)||(20518662-20518823)
chr2 (546-693)||(24188559-24188705)
chr2 (531-685)||(21503981-21504134)
chr2 (202-572)||(25397066-25397416)
chr2 (591-660)||(30999353-30999422)
chr2 (505-669)||(15453880-15454042)
chr2 (711-752)||(25474485-25474526)
chr2 (304-371)||(18819482-18819548)
chr2 (530-665)||(25460499-25460633)
chr2 (487-642)||(27917404-27917556)
chr2 (549-635)||(35708374-35708458)
chr2 (549-641)||(16593198-16593288)
chr2 (714-786)||(18819123-18819195)
chr2 (116-172)||(19593107-19593163)
chr2 (551-622)||(19948942-19949011)
chr2 (716-784)||(31262405-31262473)
chr2 (566-652)||(1733693-1733777)
chr2 (710-793)||(18533128-18533211)
chr2 (549-623)||(23909082-23909154)
chr2 (708-747)||(27917616-27917655)
chr2 (710-752)||(19949104-19949146)
chr2 (487-622)||(22511471-22511606)
[»] chr5 (43 HSPs)
chr5 (409-784)||(18178585-18178971)
chr5 (495-709)||(19763258-19763471)
chr5 (478-707)||(30791150-30791375)
chr5 (538-704)||(20084036-20084201)
chr5 (489-784)||(7742244-7742554)
chr5 (543-661)||(17028848-17028965)
chr5 (547-677)||(20695196-20695325)
chr5 (546-778)||(18281629-18281875)
chr5 (531-685)||(17381407-17381560)
chr5 (489-662)||(24131210-24131383)
chr5 (566-709)||(22930499-22930642)
chr5 (546-668)||(12265022-12265143)
chr5 (591-709)||(25594115-25594233)
chr5 (203-371)||(14207842-14208009)
chr5 (546-668)||(24268667-24268786)
chr5 (546-668)||(24345297-24345416)
chr5 (40-471)||(22930656-22931085)
chr5 (606-668)||(26329532-26329594)
chr5 (595-712)||(31340817-31340932)
chr5 (547-679)||(16622058-16622188)
chr5 (566-649)||(15694640-15694722)
chr5 (514-601)||(24846771-24846856)
chr5 (549-669)||(12339457-12339575)
chr5 (709-778)||(23157379-23157448)
chr5 (203-394)||(20695611-20695803)
chr5 (612-655)||(30072704-30072747)
chr5 (518-652)||(22230336-22230469)
chr5 (556-670)||(25945811-25945924)
chr5 (517-668)||(24842259-24842408)
chr5 (545-668)||(18451650-18451772)
chr5 (716-778)||(25368089-25368152)
chr5 (596-670)||(17694916-17694990)
chr5 (548-668)||(20715156-20715274)
chr5 (288-360)||(7742063-7742134)
chr5 (617-692)||(22643430-22643508)
chr5 (201-273)||(30791446-30791518)
chr5 (478-534)||(30803290-30803345)
chr5 (288-362)||(18281404-18281477)
chr5 (714-752)||(23125500-23125538)
chr5 (543-613)||(24517754-24517823)
chr5 (544-653)||(15339168-15339277)
chr5 (716-749)||(22230229-22230262)
chr5 (714-751)||(22755442-22755479)
[»] scaffold0190 (2 HSPs)
scaffold0190 (478-694)||(11016-11231)
scaffold0190 (708-766)||(11259-11317)
[»] scaffold0386 (2 HSPs)
scaffold0386 (543-709)||(8145-8310)
scaffold0386 (543-709)||(11175-11340)
[»] scaffold0186 (1 HSPs)
scaffold0186 (546-680)||(33162-33295)
[»] scaffold1587 (1 HSPs)
scaffold1587 (486-602)||(1247-1362)
[»] scaffold0337 (2 HSPs)
scaffold0337 (487-680)||(3710-3903)
scaffold0337 (710-766)||(3607-3663)
[»] scaffold0362 (1 HSPs)
scaffold0362 (551-668)||(8233-8348)
[»] scaffold0282 (1 HSPs)
scaffold0282 (517-668)||(22008-22157)
[»] scaffold0650 (1 HSPs)
scaffold0650 (548-663)||(5156-5269)
[»] scaffold0100 (1 HSPs)
scaffold0100 (547-666)||(37563-37681)
[»] scaffold0855 (1 HSPs)
scaffold0855 (518-654)||(2412-2546)
[»] scaffold0847 (1 HSPs)
scaffold0847 (518-654)||(2577-2711)
[»] scaffold0065 (2 HSPs)
scaffold0065 (487-680)||(12843-13035)
scaffold0065 (708-765)||(12741-12798)
[»] scaffold0624 (1 HSPs)
scaffold0624 (551-641)||(4626-4714)
[»] scaffold0011 (1 HSPs)
scaffold0011 (625-678)||(227694-227747)
[»] scaffold0804 (1 HSPs)
scaffold0804 (78-181)||(870-973)


Alignment Details
Target: chr4 (Bit Score: 680; Significance: 0; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 680; E-Value: 0
Query Start/End: Original strand, 125 - 899
Target Start/End: Complemental strand, 10577577 - 10576802
Alignment:
Q  125 ttgatttagaagcgtaacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatgacgtgtctttt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||| | |||||||||    
T  10577577 ttgatttagaagcgtaacgacgattagaaaatccttgaatcccctattttgtctttgctcaaattaaagaggttagttattagtttattatgtgtctttt 10577478  T
Q  225 gatttaagaaagtagactatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaa 324  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10577477 gatttaagaaagtagaatatgaccctatgataaagcagtggaagttttagtttcatatcactgcaatttaaccaattataattgcggcgtttccttaaaa 10577378  T
Q  325 ttgagtcaaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattg 424  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10577377 ttgagtcgaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggatcg 10577278  T
Q  425 tcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacacttgaatcataaact 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10577277 tcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacacttgaatcataaact 10577178  T
Q  525 gaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcatt 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10577177 gaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcatt 10577078  T
Q  625 acaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgctttatgaatgaatca 724  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||    
T  10577077 acaaaacaatataaaaacataccctagagaggacaagaggaggagggagatcctcttccttcaagctctgatgcttgacccttgctttatgaatgaacca 10576978  T
Q  725 aatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaatgggattttccccccaccaaatcagcttgg-aaataagc 823  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10576977 aatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaatgggattttccccccaccaaatcagcttggaaaacaagc 10576878  T
Q  824 aaacaacactgtctgcacgctgccatgtgcagggtacttgggatgacacattggggagattggggagatatccaag 899  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10576877 aaacaacactttctgcccgctgccatgtgcagggtacttgggatgacacattggggagattggtgcgatatccaag 10576802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 483 - 714
Target Start/End: Complemental strand, 33519791 - 33519561
Alignment:
Q  483 acaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccc 582  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||  ||||||||||||| |||||| | || |||||    
T  33519791 acaaatatatacaaattaaatcaaacacttgaatcataaactgaataaaaaactttattaattgaatttaacaaataagaaggggttcaacgtgaaaccc 33519692  T
Q  583 tagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttc 682  Q
    || |||| ||||||||||||  | ||||||||  ||||||||| || ||||||||||||||||||| |||||| |||| |||| ||  || ||| | | |    
T  33519691 taatcaa-agaggtttagttacatatggcaaccgacatcattataagacaatagaaaaatatacccaagagagaacaaaaggatgatagatatcttttgc 33519593  T
Q  683 ctttaagctctggtgtttgacccttgctttat 714  Q
    ||| |||||||| |||||||||||||| ||||    
T  33519592 cttgaagctctgatgtttgacccttgccttat 33519561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 42 - 603
Target Start/End: Original strand, 34332655 - 34333215
Alignment:
Q  42 aatttattagaagtaaataaaacagtaaagataaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaa 141  Q
    ||||||||||||||| ||||||    |||||||||||||||| |  ||||||||| |  |||  ||||||||||||||||||||||||| ||| ||||||    
T  34332655 aatttattagaagtacataaaaataaaaagataaagtggttgaagagttttaattgtcttgcctaatgcgagattaggttggtttgattcagatgcgtaa 34332754  T
Q  142 cgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatgacgtgtcttttgatttaagaaagtagac 241  Q
    | | ||||||   ||||||||||| | | |  | |||||| | | ||| | |   ||| |||| |||||||||| ||||||||||||||  ||||||||     
T  34332755 caaagattagggtatccttgaatctctcttcct-tctttgttggaattcatgcgcttaattatcagtttatgacctgtcttttgatttac-aaagtagaa 34332852  T
Q  242 tatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaa 341  Q
     ||||||  ||| || |  || | |||||||| ||| | | | | |||||||||| | ||||||||||||  |||| |||| || |||||||||||||||    
T  34332853 catgacctcatgatataatagcgtaagttttaattttataacgccgcaatttaacaagttataattgcggtatttctttaagat-gagtcaaaaccctaa 34332951  T
Q  342 attcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctataatccac 441  Q
     ||||||||||||||| |||| || ||||    | ||||| ||| ||||||||   ||| || ||   | | || ||||||||||||||||||| || ||    
T  34332952 cttcatacttagattcgattaaaaaaattaaa-tgagaaaataagcaatttacaattgttttgttgaaatgaaattaggattgtcaatcctatattcaac 34333050  T
Q  442 ctagagatcagttt-catc-gttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaa-cttc 538  Q
     ||||||  ||||| || | ||| |||| |||||| |||||||||| |||||||||||||||||| | ||||||||| ||||  ||||||||||| |||     
T  34333051 atagagactagttttcaactgtttgttttaaaaagcattagaaacagacatatacaaattaaatcggtcacttgaattataatttgaataaaaaatcttt 34333150  T
Q  539 ataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttg 603  Q
    || ||||||||||||||||||||||||||||| || |||||   || |||| |||||||||||||    
T  34333151 attaattgaatccaacaaataagaagaggttcttcttggaattttaatcaaaagaggtttagttg 34333215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 486 - 708
Target Start/End: Complemental strand, 4733459 - 4733239
Alignment:
Q  486 aacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||| | || || |||||||||||||||||||||||   |||||| ||| ||||||     
T  4733459 aacatatacaaattaaatcagatagttgaatcataaattgaataaaacattt-attaattgaatccaacaaataagaagtaattcatcgtgggaccctaa 4733361  T
Q  586 tcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    |||| ||||||||||||| |||||||||||||  | |||||||||||||||||||| ||||| |||| || |||| | ||||| ||||||| ||| ||||    
T  4733360 tcaa-agaggtttagttgcacatggcaacaaagcttattacaaaacaatagaaaaacataccttagaaagaacaacaagaggatggagatcatctgcctt 4733262  T
Q  686 taagctctggtgtttgacccttg 708  Q
     |||||||   ||||||||||||    
T  4733261 gaagctctaacgtttgacccttg 4733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 486 - 669
Target Start/End: Original strand, 17332004 - 17332188
Alignment:
Q  486 aacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    |||||||| ||||||||| || || |||||||||||||| |||| ||||||| || |||||||||||| ||||||| ||||||||||||||||||||||     
T  17332004 aacatataaaaattaaattaggcaattgaatcataaactaaatacaaaactttatgaattgaatccaagaaataagtagaggttcatcatggaaccctaa 17332103  T
Q  586 tcaatagaggtttagttggacatggcaacaaacatcattacaaaacaat-agaaaaatataccctagagaggacaagaggaggag 669  Q
    |||| ||||||||||||  |||||| |||  ||||  |||||||||||| | |||||||| |||||||||| |||||||||||||    
T  17332104 tcaagagaggtttagttacacatggtaactgacatagttacaaaacaataaaaaaaatattccctagagagaacaagaggaggag 17332188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 486 - 685
Target Start/End: Original strand, 39134145 - 39134344
Alignment:
Q  486 aacatatacaaattaaatcagacacttgaatcataaactgaataaaaaa-cttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| ||| || |||||||||| |||||||||||  |||||||| || |||  ||    
T  39134145 aacatatacaaattaaatcaaacacttgaatcataaattgaataaaaaaactttattaattgaatcctacaaataagaaatggttcatcgtgaaacttta 39134244  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcct 684  Q
     |||| ||||||||| ||| ||||| || |||||||||||| ||||||||||||||| ||||  || |||| |||| |||||||  ||||||||||||||    
T  39134245 atcaa-agaggtttatttgcacatgacatcaaacatcattataaaacaatagaaaaacatacattatagagaacaataggaggatagagatcctcttcct 39134343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 481 - 668
Target Start/End: Original strand, 31859247 - 31859434
Alignment:
Q  481 aaacaaacatatacaaattaaatcagacacttgaatcataaactgaata-aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaa 579  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||| || || | |||||||||| |||||| ||| |||| ||| |||||    
T  31859247 aaacagacatatacaaattaaatcagacacttgaatcgtaaactgaatatacaaaatttattagttgaatccaaaaaataataaggggtttatcgtggaa 31859346  T
Q  580 ccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    || || |||| ||||||||||||| ||||| |||| || ||||||||||||||||||||| | |||||||   ||| ||||||||||||    
T  31859347 ccttaatcaa-agaggtttagttgcacatgacaaccaatatcattacaaaacaatagaaagacataccctgatgagaacaagaggagga 31859434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 486 - 641
Target Start/End: Complemental strand, 34667451 - 34667292
Alignment:
Q  486 aacatatacaaattaaatcagacacttgaatcataaactgaataaaaaa----cttcataaattgaatccaacaaataagaagaggttcatcatggaacc 581  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    |||| | |||||||||||||||||||| ||||||||||| |||||||    
T  34667451 aacatatacaaattaaatcagacacttgaattataaactgaataaaaaaaaaacttctttaattgaatccaacaaataaggagaggttcatcttggaacc 34667352  T
Q  582 ctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    ||  |||| | | ||||| |||  ||||||| | |||||| ||||||||||| |||||||    
T  34667351 ctgatcaagacaagtttatttgctcatggcatccaacatcgttacaaaacaaaagaaaaa 34667292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 495 - 676
Target Start/End: Original strand, 7023593 - 7023774
Alignment:
Q  495 aaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagag 594  Q
    |||||||||| |||| |||||  ||||||||||| | |||||| || ||||||||||||||||||||||  |||||||||||||||| || |||| ||||    
T  7023593 aaattaaatctgacaattgaaatataaactgaatgacaaactttattaattgaatccaacaaataagaatgggttcatcatggaaccataatcaagagag 7023692  T
Q  595 gtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatc 676  Q
    ||||||||| |||||| |||  || |||||||||||||| | ||||| |||| |||||||  || | ||||||| |||||||    
T  7023693 gtttagttgcacatggaaaccgacgtcattacaaaacaacataaaaacatacactagagaaaacgaaaggaggatggagatc 7023774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 518 - 778
Target Start/End: Complemental strand, 29438146 - 29437873
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    ||||||||||||||||| ||  ||||  ||||||||||||||||||  |||||||  |||||||||| |||| |||||||||||||  ||||| |||  |    
T  29438146 ataaactgaataaaaaatttattaaaa-gaatccaacaaataagaaagggttcattgtggaaccctaatcaa-agaggtttagttgctcatggaaaccga 29438049  T
Q  618 catcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctc-tggtgtttgacccttgc------- 709  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||| | || |||||||||| ||||| |||||| |  || |||||||||||           
T  29438048 catcattacaaaacaatagaaaaacataccctagagataacaagagaatgatggagatcctcgtccttgaagctcttaatgcttgacccttgccttgtac 29437949  T
Q  710 -------tttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagaga 778  Q
           ||| |||||||||  || |||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  29437948 cactagttttctgaatgaatacaagagtgtgcaagagtctctatttatagtgcatgattacttaggggttaagaga 29437873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 551 - 663
Target Start/End: Original strand, 1695327 - 1695437
Alignment:
Q  551 caacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacccta 650  Q
    |||||||||||||| ||||||||||||||||||| ||||  ||||||||||||| |||| ||||||||||| | ||||||||||||||||| |||||||     
T  1695327 caacaaataagaaggggttcatcatggaaccctaatcaa--gaggtttagttggtcatgacaacaaacatcgtgacaaaacaatagaaaaacataccctc 1695424  T
Q  651 gagaggacaagag 663  Q
    ||||| |||||||    
T  1695425 gagagaacaagag 1695437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 478 - 569
Target Start/End: Complemental strand, 26160508 - 26160417
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggtt 569  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||||||||    
T  26160508 tagaaacatgcatatataaattaaatcagacacttgaatcataaactaaataaaaaattttattaattgaatccaacaaataagaagaggtt 26160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 641
Target Start/End: Complemental strand, 21047953 - 21047790
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaa--aaacttcataaattgaatccaacaaataagaagaggttcatcat 575  Q
    ||||||| |||||||| ||||||||| |||||||| ||||| ||||||||||||  |||||| ||  |||||||  |||| |||||||   ||||||| |    
T  21047953 tagaaacgaacatatataaattaaataagacacttcaatcagaaactgaataaacaaaactttatttattgaatt-aacagataagaatgagttcatctt 21047855  T
Q  576 ggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    | ||||||| |||| ||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  21047854 gaaaccctaatcaa-agaggtttagttgcacatggcaaccaacatcattacaaaacaataaaaaaa 21047790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 543 - 668
Target Start/End: Complemental strand, 5676891 - 5676767
Alignment:
Q  543 attgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaat 642  Q
    ||||||||||| |||||| ||||||||| || | |||||||| |||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||||     
T  5676891 attgaatccaaaaaataataagaggttcttcttagaaccctaatcaa-agaggttcagttgcacatagcaacatacatcattacaaaacaatagaaaaac 5676793  T
Q  643 ataccctagagaggacaagaggagga 668  Q
    ||||| |||| || ||||||||||||    
T  5676792 ataccatagaaagaacaagaggagga 5676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 548 - 692
Target Start/End: Complemental strand, 19602471 - 19602328
Alignment:
Q  548 atccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacc 647  Q
    ||||||||||| ||||| ||||||||||||||||||| |||| ||| |||||||||  |||||||||  ||||||||||||||||||||||||| |||||    
T  19602471 atccaacaaatgagaaggggttcatcatggaaccctaatcaa-agaagtttagttgctcatggcaaccgacatcattacaaaacaatagaaaaacatacc 19602373  T
Q  648 ctagagaggacaagaggaggagggagatcctcttcctttaagctc 692  Q
    || ||||  |||| |||| ||  || ||||||| |||| ||||||    
T  19602372 ctcgagataacaaaaggatgatagaaatcctctgccttgaagctc 19602328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 517 - 668
Target Start/End: Original strand, 47024141 - 47024290
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||| |||||||| || |||   ||| ||||||||||||||| |||||| |||||||||| | ||  ||||||| || |  |||| ||||||    
T  47024141 cataaactgaatgaaaaactttattaataatatcaaacaaataagaagagattcatcttggaaccctaattaa--gaggtttcgtagctcatgacaacaa 47024238  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||    
T  47024239 acatcataacaaaacaatagaaaaatataccttagagagaacaagagaagga 47024290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 530 - 685
Target Start/End: Complemental strand, 26188464 - 26188311
Alignment:
Q  530 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 629  Q
    |||||||| || ||| | |||||||||||||||||  ||||||| | |||||||| |||| ||||||||||||| ||||| ||||| ||||| | |||||    
T  26188464 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacatgacaacatacatcgtaacaaa 26188366  T
Q  630 acaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||||||| |||| |||||||| |||| |||||||||||| | ||||||||| ||||    
T  26188365 acaatag-aaaacataccctatagagaacaagaggaggatgaagatcctctgcctt 26188311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 515 - 679
Target Start/End: Complemental strand, 18444931 - 18444770
Alignment:
Q  515 atcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaac 614  Q
    |||||||| ||||||| ||| || || |||||||||||| |||||||||| | |||||| |||||||||| |||| ||| ||||| |||  ||||||| |    
T  18444931 atcataaattgaataagaaagtttattaattgaatccaaaaaataagaag-gtttcatcgtggaaccctaatcaa-agatgtttatttgctcatggcacc 18444834  T
Q  615 aaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctc 679  Q
    || |||||||||||||||| | ||||| ||||||||  ||| |||||||||||| ||||||||||    
T  18444833 aa-catcattacaaaacaacataaaaacataccctaatgagaacaagaggaggatggagatcctc 18444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 486 - 668
Target Start/End: Complemental strand, 32022514 - 32022333
Alignment:
Q  486 aacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||||| ||| || ||||||||||| |||| |||   ||||||||| |||||| |||     
T  32022514 aacatatacaaattaaataagacgcttgatttataaactgaataaaaa-ctttattaattgaatccagcaaagaagtgaaggttcatcgtggaactctaa 32022416  T
Q  586 tcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    |||| || |||||| ||  |||||| |||  ||||||||||||||||| | || || ||| |||| |||| |||||| |||||    
T  32022415 tcaagagtggtttaattacacatggtaaccgacatcattacaaaacaacataagaacatatcctaaagagaacaagatgagga 32022333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 549 - 669
Target Start/End: Original strand, 9782521 - 9782639
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    |||||||||||||||| |||||||| |||||||||| ||||  ||||||||||||  ||||  |||| ||||||| ||||||||||||| ||||||||||    
T  9782521 tccaacaaataagaaggggttcatcgtggaaccctaatcaa--gaggtttagttgctcatgcaaacatacatcataacaaaacaatagacaaatataccc 9782618  T
Q  649 tagagaggacaagaggaggag 669  Q
    |||| || | || ||||||||    
T  9782619 tagaaagaataaaaggaggag 9782639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 487 - 630
Target Start/End: Complemental strand, 9288681 - 9288538
Alignment:
Q  487 acatatacaaa-ttaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    ||||||||||| ||||||| |||| |  || |||| ||||||| |||||||| || ||||||||||||||||||| ||| |||||||  | ||||| ||     
T  9288681 acatatacaaaattaaatctgacaatcaaaacatagactgaatgaaaaactttattaattgaatccaacaaataataaggggttcattgtagaaccataa 9288582  T
Q  586 tcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    |||| ||||||||||||| | |||  |||||||||||||||||||    
T  9288581 tcaa-agaggtttagttgcatatgtgaacaaacatcattacaaaa 9288538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 708 - 784
Target Start/End: Complemental strand, 26160335 - 26160259
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaa 784  Q
    ||||| ||||||||| ||| |||||||||| |||||||||||||| |||||| |||||| |||||||||||||||||    
T  26160335 gctttctgaatgaataaaagagtgtgcaagagtctctatttatagggcataattacttatgggttaagagaagaaaa 26160259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 478 - 650
Target Start/End: Complemental strand, 22120427 - 22120257
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    ||||||||||||||| |||||||||| | ||  | || |||| |||| |||||||||||| || |||||||  ||||||||||||||  ||||||| ||     
T  22120427 tagaaacaaacatatccaaattaaattatactttaga-tcatcaactaaataaaaaactttattaattgaaaacaacaaataagaaggtgttcatcgtga 22120329  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacccta 650  Q
    ||||||| |||| | ||| |||||||  ||||| |||  |||||||| ||||| |||| ||||| ||||||||    
T  22120328 aaccctaatcaa-ataggcttagttgttcatggaaactgacatcattgcaaaataatataaaaacatacccta 22120257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 12806378 - 12806488
Alignment:
Q  548 atccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacc 647  Q
    |||||||||||| |||| |||||||  ||| |||||| || |  || |||||||||  |||| ||| ||||||||| ||||||||||||||||||||| |    
T  12806378 atccaacaaatacgaaggggttcattgtgggaccctaatcca--gaagtttagttgctcatgacaataaacatcataacaaaacaatagaaaaatatatc 12806475  T
Q  648 ctagagaggacaa 660  Q
    |||||||| ||||    
T  12806476 ctagagagaacaa 12806488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 517 - 660
Target Start/End: Original strand, 10450870 - 10451011
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||||||| |||| || |||   ||||||||||||| ||| |||||||||| |||||||| |||  |||||||||||||  |||| |||||     
T  10450870 cataaactgaataaaagactttattaataatatccaacaaataataaggggttcatcatagaaccctaatca--agaggtttagttgttcatgacaacat 10450967  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaa 660  Q
    | ||||| |  |||| ||||||||| || || ||||||| ||||    
T  10450968 aaatcataatgaaaccatagaaaaacatgccttagagagaacaa 10451011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 478 - 598
Target Start/End: Complemental strand, 23354312 - 23354194
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||||||||||||||| ||||||| ||  | || |||||||||||||||| ||| | || |||||||| ||| |||||||||| | || ||| |||    
T  23354312 tagaaacaaacatatacaaaataaatcatactttaga-tcataaactgaataaataaccttattaattgaatacaataaataagaagggatttatcgtgg 23354214  T
Q  578 aaccctagtcaatagaggttt 598  Q
    ||||||| |||| ||||||||    
T  23354213 aaccctaatcaa-agaggttt 23354194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 710 - 784
Target Start/End: Original strand, 31859477 - 31859552
Alignment:
Q  710 tttatgaatgaatcaaatagtgtgcaagggtctctatttat-agtgcataaatacttacgggttaagagaagaaaa 784  Q
    ||| ||||||||| ||| |||||||||||||||||| |||| ||||||| | |||||| |||||||||||||||||    
T  31859477 tttctgaatgaataaaagagtgtgcaagggtctctacttataagtgcatcattacttaggggttaagagaagaaaa 31859552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 667
Target Start/End: Original strand, 16441632 - 16441755
Alignment:
Q  542 aattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||||||||||||  |||||| | || |||||||||| ||||||  |||||||||  |||||| || | |||| ||||||||  || |||||||    
T  16441632 aattgaatccaacaaataaatagaggtccttcgtggaaccctaatcaatattggtttagttacacatggtaatagacattattacaaacgaaaagaaaaa 16441731  T
Q  642 tataccctagagaggacaagaggagg 667  Q
     |||| |||||||  |||||||||||    
T  16441732 catactctagaga--acaagaggagg 16441755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 593 - 655
Target Start/End: Original strand, 17184088 - 17184150
Alignment:
Q  593 aggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagag 655  Q
    |||||||||||  ||||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  17184088 aggtttagttgctcatggcaaccaacatcattagaaaacaatagaaaaacatacccgagagag 17184150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 555 - 663
Target Start/End: Original strand, 17024355 - 17024461
Alignment:
Q  555 aaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagaga 654  Q
    |||||||||  ||||||||||||||||||| | ||  ||||||||||||  ||||| |||||||||||| | ||| | ||||||||| ||  ||||||||    
T  17024355 aaataagaaagggttcatcatggaaccctaataaa--gaggtttagttgctcatggaaacaaacatcataataaagctatagaaaaacatttcctagaga 17024452  T
Q  655 ggacaagag 663  Q
    | |||||||    
T  17024453 gaacaagag 17024461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 708 - 789
Target Start/End: Complemental strand, 21077792 - 21077711
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaatggg 789  Q
    ||||| ||||||||| | ||||||  ||||||||||||||||||||  || | |||||| ||||||||||||||||| ||||    
T  21077792 gctttttgaatgaataagatagtggacaagggtctctatttatagtagatcattacttaggggttaagagaagaaaattggg 21077711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 7144237 - 7144169
Alignment:
Q  100 ctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccc 168  Q
    |||| ||||| |||||||||||||||||||||| | | ||||||||||||||  |||| ||||||||||    
T  7144237 ctgcccaatgtgagattaggttggtttgatttaaatgtgtaacgacgattagggaatcattgaatcccc 7144169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 10577612 - 10577576
Alignment:
Q  9 aggcacacacctcatgtgatagaatgttatcggaatt 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  10577612 aggcacacacctcatgtgatagaatgttatcggaatt 10577576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 537
Target Start/End: Complemental strand, 25366976 - 25366924
Alignment:
Q  485 aaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaactt 537  Q
    ||||||||||||||||||||| ||| |||||||||||||| |||| |||||||    
T  25366976 aaacatatacaaattaaatcaaacaattgaatcataaactaaatataaaactt 25366924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 517 - 655
Target Start/End: Complemental strand, 27303447 - 27303312
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||| ||||| || || |||  | |||||||||||||||| |||||||| |||||||||| |||  |||||||||||||  ||||| ||       
T  27303447 cataaactgaatcaaaaaatttattaataaattccaacaaataagaag-ggttcatcgtggaaccctaatca--agaggtttagttgctcatggaaatcg 27303351  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagag 655  Q
    | ||||| | ||||| ||||||||| ||||| |||||||    
T  27303350 atatcataaaaaaactatagaaaaacataccatagagag 27303312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 709 - 782
Target Start/End: Original strand, 12028483 - 12028556
Alignment:
Q  709 ctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaa 782  Q
    |||| ||||||||| ||| |||||||||| |||||||||||||||||||   |||||  | |||||||||||||    
T  12028483 ctttctgaatgaataaaagagtgtgcaagagtctctatttatagtgcatctttacttgtgagttaagagaagaa 12028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 660
Target Start/End: Complemental strand, 51885319 - 51885210
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    ||||| |||||||||| |||||||| ||||| |||| ||||  ||||||||||||  |||| ||||   |||||| | ||||||| ||||||| ||||||    
T  51885319 tccaataaataagaaggggttcatcgtggaaacctaatcaa--gaggtttagttgttcatgacaactggcatcataagaaaacaaaagaaaaacataccc 51885222  T
Q  649 tagagaggacaa 660  Q
    || |||| ||||    
T  51885221 tacagagaacaa 51885210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 654
Target Start/End: Complemental strand, 18898679 - 18898579
Alignment:
Q  552 aacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctag 651  Q
    ||||||||||||| |||||||| ||||||| || ||||  || || ||||||   ||| ||||| ||||||| ||||||||||||||||| ||| | |||    
T  18898679 aacaaataagaaggggttcatcttggaaccataatcaa--gatgtctagttgcttatgacaacatacatcataacaaaacaatagaaaaacataacttag 18898582  T
Q  652 aga 654  Q
    |||    
T  18898581 aga 18898579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 21078072 - 21077990
Alignment:
Q  288 caatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattt 371  Q
    ||||| |||||| || ||||||| | || |||||| || |||||| | |||||||||||||||||||||| |||| ||||||||    
T  21078072 caattcaaccaactacaattgcgccattcccttaagat-gagtcatagccctaaattcatacttagattcgattaaaagaattt 21077990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 547 - 649
Target Start/End: Original strand, 10079587 - 10079689
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    |||||||| |||||| |||||||||||  ||||||||| | || ||||||||||||   ||||| |||  ||||  ||||||||||||| ||||  ||||    
T  10079587 aatccaaccaataagtagaggttcatctaggaaccctaatgaaaagaggtttagttacgcatggtaaccgacattgttacaaaacaatataaaagcatac 10079686  T
Q  647 cct 649  Q
    |||    
T  10079687 cct 10079689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 547 - 641
Target Start/End: Original strand, 13275147 - 13275241
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||||||   ||||||||||||||||| |||| |||| ||||||| |||   |||||| | | | |||||| | |||||||||||||||    
T  13275147 aatccaacaaatatttagaggttcatcatggaatcctaatcaagagaggttcagtaacacatggtatccatcatcatcaaaaaacaatagaaaaa 13275241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 517 - 615
Target Start/End: Complemental strand, 22219422 - 22219325
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaaca 615  Q
    |||||| ||||| |||||||| || |||   ||||||||||||||||| |||||||| |||||||||| |||| |||  |||| |||  ||||||||||    
T  22219422 cataaattgaatgaaaaactttattaataatatccaacaaataagaag-ggttcatcttggaaccctaatcaagagatttttatttgttcatggcaaca 22219325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 531 - 655
Target Start/End: Complemental strand, 24577045 - 24576925
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    |||||| ||| ||| ||||||||||||||||    |||| ||| |||||||||||| || ||||||||| |||  |||| ||||  |  |||||||||||    
T  24577045 aaaactacattaatagaatccaacaaataagg---ggtttatcgtggaaccctagttaa-agaggtttaattgctcatgacaaccgatgtcattacaaaa 24576950  T
Q  631 caatagaaaaatataccctagagag 655  Q
     |||||| ||| |||||||||||||    
T  24576949 taatagagaaacataccctagagag 24576925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 24041826 - 24041879
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagtt 602  Q
    |||||||||||| |||||||||||||| |||||||| |||| ||  ||||||||    
T  24041826 tccaacaaataaaaagaggttcatcatagaaccctaatcaaaaggtgtttagtt 24041879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 652
Target Start/End: Original strand, 25314704 - 25314765
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctaga 652  Q
    |||||||||||||    ||| |||||||||||| | ||||||||||||||| ||||||||||    
T  25314704 agaggtttagttgcttgtggtaacaaacatcataagaaaacaatagaaaaacataccctaga 25314765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 369
Target Start/End: Original strand, 31859091 - 31859155
Alignment:
Q  304 aattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaat 369  Q
    |||||||| | ||||||||||| |||||| | ||||||||||||||||| |||| |||| ||||||    
T  31859091 aattgcggtgattccttaaaat-gagtcatagccctaaattcatacttatattcgattaaaagaat 31859155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 6e-98; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 42 - 709
Target Start/End: Complemental strand, 5637407 - 5636740
Alignment:
Q  42 aatttattagaagtaaataaaacagtaaagat-aaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgta 140  Q
    ||||||||||||||||||| || |  |||||| ||||||||||||  ||| ||||| |  |||  | ||||||||||||||||| ||||| ||| |||||    
T  5637407 aatttattagaagtaaatagaatataaaagatgaaagtggttgtagcgttataattgtcttgcctagtgcgagattaggttggtctgattcagatgcgta 5637308  T
Q  141 acgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatgacgtgtcttttgatttaagaaagtag- 239  Q
    |||||||||||| |||||||||||||||| |||  |||||| | | ||||| |  |||||||| ||||||||||| |||||||||||||||||||||||     
T  5637307 acgacgattagagaatccttgaatccccc-tttcatctttgttggaattaacgcagttagttactagtttatgacatgtcttttgatttaagaaagtagt 5637209  T
Q  240 actatgaccctatggtaaa----gcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaa 335  Q
    | |||||||| ||| || |    ||||||||||||||| ||| | ||  |  ||||| ||||| ||| ||||| ||||         |  ||||||||||    
T  5637208 attatgaccccatgatatatatagcagtggaagttttattttaatatttccacaattcaaccagttacaattgtggcg---------agatgagtcaaaa 5637118  T
Q  336 ccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctata 435  Q
    ||||||||||||||||||||||||| | ||||||||   | ||| ||||  ||||||||   |||| |  | | ||| ||||||| ||||||||| ||||    
T  5637117 ccctaaattcatacttagattcaataaaaagaatttaattgagatactaggcaatttactactgtcatggtcgaacgaaagtagggttgtcaatcttata 5637018  T
Q  436 atccacctagagatcagtttcatcgttggtttgaaaaagtattaga-aacaaacatatacaaattaaatcagacacttgaatcataaactgaat--aaaa 532  Q
    |||||||||||||||||||||||| |||||||| ||||| | || | |||| ||||||| |||||||||| |||||||||||||||||||||||  ||||    
T  5637017 atccacctagagatcagtttcatcattggtttgcaaaagcaataaagaacatacatatataaattaaatctgacacttgaatcataaactgaataaaaaa 5636918  T
Q  533 aacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaaca 632  Q
    ||||| || |||  |||||||||||||| ||  |||||||| || ||||||| | || ||||||| ||||| ||||| ||||| ||||||||||||||||    
T  5636917 aactttatcaatcaaatccaacaaataataaagggttcatcctgaaaccctaataaagagaggttgagttgcacatgacaacatacatcattacaaaaca 5636818  T
Q  633 at-agaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgc 709  Q
    || ||||||| ||||||||||||| |||||||||||  ||||||| ||| |||| ||||| || || |||||| ||||    
T  5636817 ataagaaaaaaataccctagagagaacaagaggaggttggagatcatctgccttgaagctttgatgcttgaccattgc 5636740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 326 - 691
Target Start/End: Complemental strand, 18467427 - 18467061
Alignment:
Q  326 tgagtcaaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgt 425  Q
    |||||||||||||||||| |||||||| |||  |||||||||| ||    ||||||||||  | |||||   ||||    | ||| ||||| ||| ||||    
T  18467427 tgagtcaaaaccctaaatccatacttaaatttgattagaagaaattaataaagaaactaagtagtttactattgtcaaggtcggaaggaagcagggttgt 18467328  T
Q  426 caatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattaga-aacaaacatatacaaattaaatcagacacttgaatcataaact 524  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| | || ||| ||||||||||||||||||||||  |||||||||||||||||||    
T  18467327 caatcctataatccacctagagatcagtttcatcattagtttgaaaaggcatcagagaacaaacatatacaaattaaatttgacacttgaatcataaact 18467228  T
Q  525 gaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcatt 624  Q
    |||| ||    || || ||||||||||||| ||||||||| |||| ||| | ||||| || |||| ||||||||| |||  ||||| |||| ||||||||    
T  18467227 gaatgaagttttttattaattgaatccaactaataagaaggggtttatcgttgaaccataatcaagagaggtttaattgcgcatggtaacatacatcatt 18467128  T
Q  625 acaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagct 691  Q
    |||||||||||||||||||||||| || ||   ||||||||||||||| ||||||| |||| |||||    
T  18467127 acaaaacaatagaaaaatataccccagtgaaagcaagaggaggagggaaatcctctaccttgaagct 18467061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 412 - 654
Target Start/End: Original strand, 11467359 - 11467605
Alignment:
Q  412 ggaagtaggattgtcaatcctataatccacctagagatcagtttcatcgttggtttgaa-----aaagtattagaaacaaacatatacaaattaaatcag 506  Q
    ||||||||| |||||| |||||||||| |||||||| ||||||||||| || || ||||     |||  |||| ||  | |||||||||||||||||       
T  11467359 ggaagtagggttgtcattcctataatcaacctagaggtcagtttcatcatttgtctgaagaaaaaaaaaattaaaactagacatatacaaattaaatata 11467458  T
Q  507 acacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggac 606  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||  ||||||| || |||| |||| |||||||| ||    
T  11467459 acacttgaatcataagctgaataaaaaacttgattaattgaatccaacaaataagaagaggtccattgtggaaccttaatcaagagagatttagttgcac 11467558  T
Q  607 atggcaacaaacatcattacaaaacaatagaaaaatataccctagaga 654  Q
    ||  ||| | |||||||||||||||||||  |||| ||||||||||||    
T  11467559 ataacaaaatacatcattacaaaacaata-taaaacataccctagaga 11467605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 488 - 676
Target Start/End: Original strand, 5312138 - 5312325
Alignment:
Q  488 catatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtc 587  Q
    |||||||||||||||||  ||| | ||| |||||||| ||| ||||| || || ||||||||||||||||||||||  |||||||| | ||| |||| ||    
T  5312138 catatacaaattaaatctaacaatcgaaacataaactaaatgaaaaaatttatcaattgaatccaacaaataagaatgggttcatcgtagaatcctaatc 5312237  T
Q  588 aatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatc 676  Q
    || ||||||||||||| ||||| ||||  |||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||    
T  5312238 aa-agaggtttagttgcacatgacaaccgacatcattacaaaacaattgaaaaacataccctagagagaacaagaggaggatggagatc 5312325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 549 - 651
Target Start/End: Original strand, 2629947 - 2630047
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    |||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||  |||||||||||||||||| ||||||||| | ||||| ||||||    
T  2629947 tccaacaaataagaaggggttcatcatggaaccctaatcaa--gaggtttagttgctcatggcaacaaacatcataacaaaacaaaataaaaacataccc 2630044  T
Q  649 tag 651  Q
    |||    
T  2630045 tag 2630047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 546 - 693
Target Start/End: Complemental strand, 9760797 - 9760651
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    ||||||||||||||||||| |||||||| || | ||||| |||| ||||||||||| |  | ||| | |  |||||||||||||| |||||||||| |||    
T  9760797 gaatccaacaaataagaaggggttcatcgtgaagccctactcaa-agaggtttagtcgctcctggaatctgacatcattacaaaataatagaaaaacata 9760699  T
Q  646 ccctagagaggacaagaggaggagggagatcctcttcctttaagctct 693  Q
    || ||||||| |||| ||||||| |||||||||||||||| |||||||    
T  9760698 ccttagagagaacaataggaggatggagatcctcttccttgaagctct 9760651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 486 - 666
Target Start/End: Original strand, 19139314 - 19139494
Alignment:
Q  486 aacatatacaaattaaatcagacact-tgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    |||||||||||||||||||||||| | |||||||||||||  ||| ||| ||| || |||||||||||  ||||||| |||||||||||  ||| | |||    
T  19139314 aacatatacaaattaaatcagacaatgtgaatcataaactatatagaaa-ctttattaattgaatccatgaaataagtagaggttcatcgcggagcacta 19139412  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggag 666  Q
     |||| ||| ||||||||  |||||| |||| |||||||||||||| || |||||   |||||||| |||| ||||||||||    
T  19139413 atcaagagatgtttagttacacatggtaacatacatcattacaaaataagagaaatgaataccctaaagagaacaagaggag 19139494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 486 - 666
Target Start/End: Original strand, 20738713 - 20738893
Alignment:
Q  486 aacatatacaaattaaatcagacact-tgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    |||||||||||||||||||||||| | |||||||||||||  ||| ||| ||| || |||||||||||  ||||||| |||||||||||  ||| | |||    
T  20738713 aacatatacaaattaaatcagacaatgtgaatcataaactatatagaaa-ctttattaattgaatccatgaaataagtagaggttcatcgcggagcacta 20738811  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggag 666  Q
     |||| ||| ||||||||  |||||| |||| |||||||||||||| || |||||   |||||||| |||| ||||||||||    
T  20738812 atcaagagatgtttagttacacatggtaacatacatcattacaaaataagagaaatgaataccctaaagagaacaagaggag 20738893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 517 - 641
Target Start/End: Original strand, 26839591 - 26839713
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||| |||||||| || |||  |||||||||||||||||| |||||||| ||||||| || |||  |||||||||||||  |||||||||||    
T  26839591 cataaactgaatgaaaaactttattaataaaatccaacaaataagaaggggttcatcttggaaccttaatca--agaggtttagttgctcatggcaacaa 26839688  T
Q  617 acatcattacaaaacaatagaaaaa 641  Q
    | ||||| ||||||||||| |||||    
T  26839689 atatcataacaaaacaatataaaaa 26839713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 591 - 709
Target Start/End: Complemental strand, 9552799 - 9552680
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagc 690  Q
    |||||||||||||  ||||| | |  ||||||| |||||| |||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  9552799 agaggtttagttgctcatggaagctgacatcatcacaaaataatagaaaaatataccctagagagaacaagaggatgatggagatcctcttccttgaagc 9552700  T
Q  691 tc-tggtgtttgacccttgc 709  Q
    || || || |||||||||||    
T  9552699 tcttgatgcttgacccttgc 9552680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 531 - 665
Target Start/End: Original strand, 21545260 - 21545391
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || |||| |||||||||||||||||| |||||||| | ||| |||| |||| ||||||||| ||| |||||  ||||| |||||| ||||||    
T  21545260 aaaactttattaattaaatccaacaaataagaaggggttcatcttagaagcctaatcaa-agaggtttacttgcacatg--aacaatcatcataacaaaa 21545356  T
Q  631 caatagaaaaatataccctagagaggacaagagga 665  Q
    ||||| ||||| ||||||||||||| |||||||||    
T  21545357 caatataaaaacataccctagagagaacaagagga 21545391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 511 - 640
Target Start/End: Original strand, 7326369 - 7326497
Alignment:
Q  511 ttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatgg 610  Q
    ||||| |||||||| |||| ||| ||| || |||| ||||||||||||||| | | ||||||| |||||||||| | || ||||||||||||  ||||||    
T  7326369 ttgaaccataaactaaatagaaa-ctttattaattaaatccaacaaataagtacatgttcatcgtggaaccctaataaagagaggtttagttacacatgg 7326467  T
Q  611 caacaaacatcattacaaaacaatagaaaa 640  Q
    |||||||||||||||||||| || ||||||    
T  7326468 caacaaacatcattacaaaataagagaaaa 7326497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 517 - 653
Target Start/End: Complemental strand, 7816032 - 7815898
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||| ||||||||||| |||  | || ||||||||||||| |||| ||| |||||| ||| ||||  ||||||||||||  ||||||||||     
T  7816032 cataaactgaatgaaaaacttcattaataaattcgaacaaataagaaggggtttatcttggaacgctaatcaa--gaggtttagttgctcatggcaacat 7815935  T
Q  617 acatcattacaaaacaatagaaaaatataccctagag 653  Q
    ||||||  | ||||||||||||||| |||||||||||    
T  7815934 acatcacaagaaaacaatagaaaaacataccctagag 7815898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 9405280 - 9405370
Alignment:
Q  548 atccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaa 640  Q
    ||||||||||||||||| ||||||||||||||||||| | ||  ||||||||||||  |||||||||| ||||||| ||||||||||||||||    
T  9405280 atccaacaaataagaaggggttcatcatggaaccctaattaa--gaggtttagttgctcatggcaacatacatcataacaaaacaatagaaaa 9405370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 546 - 654
Target Start/End: Complemental strand, 3400524 - 3400417
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    |||||||| |||||||||| |||||||| | ||||| || |||| ||||||||||||| ||||||||| ||| ||||| ||||||||||| ||||| |||    
T  3400524 gaatccaagaaataagaaggggttcatcttagaaccttaatcaa-agaggtttagttgcacatggcaataaaaatcataacaaaacaatataaaaacata 3400426  T
Q  646 ccctagaga 654  Q
    |||||||||    
T  3400425 ccctagaga 3400417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 517 - 660
Target Start/End: Complemental strand, 7494003 - 7493862
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||| ||||||||||| |||  | | |||||||||||||| ||||| || || |  |||| ||||  ||||||||||||| ||||||||||     
T  7494003 cataaactgaatgaaaaacttcattaataaatttcaacaaataagaaggggttcgtcgtgtattcctaatcaa--gaggtttagttggtcatggcaacat 7493906  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaa 660  Q
    ||||||| | | ||||||||||||| ||||||||||||| ||||    
T  7493905 acatcataaaataacaatagaaaaacataccctagagagaacaa 7493862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 531 - 678
Target Start/End: Complemental strand, 20017692 - 20017547
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || ||||||||||||| ||||||||  |||||||| | |||||||| |||||||  |||||||||  ||||| ||||| || ||| ||||||    
T  20017692 aaaactttatcaattgaatccaaccaataagaaagggttcatcttagaaccctaatcaatag--gtttagttgctcatggtaacaaccaacataacaaaa 20017595  T
Q  631 caatagaaaaatataccctagagaggacaagaggaggagggagatcct 678  Q
    ||||||||||| ||| || |||||| ||||||||| || | |||||||    
T  20017594 caatagaaaaacatagccaagagagaacaagaggaagatgaagatcct 20017547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 530 - 634
Target Start/End: Complemental strand, 30406285 - 30406182
Alignment:
Q  530 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 629  Q
    |||||||| || ||||||||||||||||| ||||| |||||||| ||||||| || |||| |||||||||||||   |||||||| ||||||||||||||    
T  30406285 aaaaactttattaattgaatccaacaaatgagaaggggttcatcgtggaaccataatcaa-agaggtttagttgcttatggcaaccaacatcattacaaa 30406187  T
Q  630 acaat 634  Q
    |||||    
T  30406186 acaat 30406182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 547 - 709
Target Start/End: Complemental strand, 9801237 - 9801076
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    |||||||||| ||||||| |||||||| || | | ||| |||| ||||||| ||| |  ||||| |||  |||||||||||||| ||| |||||| | ||    
T  9801237 aatccaacaa-taagaaggggttcatcgtgaagctctactcaa-agaggttaagtcgctcatggaaacggacatcattacaaaataattgaaaaacacac 9801140  T
Q  647 cctagagaggacaagaggaggagggagatcctcttcctttaagctc-tggtgtttgacccttgc 709  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||| || || |||||||||||    
T  9801139 cctagagagaacaagaggaggatggagatcctcttccttaaagctcttgatgcttgacccttgc 9801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 7777524 - 7777626
Alignment:
Q  559 aagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggac 658  Q
    |||||| |||||||| |||||| ||| ||||  || |||||||||  |||||||||||||||||| | ||||||||||||||| ||||||||||||| ||    
T  7777524 aagaaggggttcatcttggaactctaatcaa--gaagtttagttgctcatggcaacaaacatcataataaaacaatagaaaaacataccctagagagaac 7777621  T
Q  659 aagag 663  Q
    |||||    
T  7777622 aagag 7777626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 643
Target Start/End: Complemental strand, 23073034 - 23072919
Alignment:
Q  527 ataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattac 626  Q
    |||||||| || || ||| ||||||||||||||||||  |||||||  | |||||||| |||| ||||||| ||||  ||||| |||||||||||||||     
T  23073034 ataaaaaaatttattaatggaatccaacaaataagaaatggttcattttagaaccctaatcaa-agaggttaagtttcacatgccaacaaacatcattat 23072936  T
Q  627 aaaacaatagaaaaata 643  Q
    |||||||||||||||||    
T  23072935 aaaacaatagaaaaata 23072919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 635
Target Start/End: Original strand, 10054294 - 10054439
Alignment:
Q  489 atatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtca 588  Q
    ||||||| ||||||||||| | |||||| ||| | |||||| ||| ||| || ||||||||| |||||||||| ||| |||| || | |||||||| | |    
T  10054294 atatacagattaaatcagaaaattgaataatataatgaatataaa-ctttattaattgaatctaacaaataagtagatgttcgtcgtagaaccctaataa 10054392  T
Q  589 atagaggtttagttggacatggcaacaaacatcattacaaaacaata 635  Q
    | ||||||||||||   ||||| ||||||||||||||||||| ||||    
T  10054393 agagaggtttagttactcatggtaacaaacatcattacaaaataata 10054439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 577 - 709
Target Start/End: Original strand, 4091936 - 4092067
Alignment:
Q  577 gaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatc 676  Q
    |||||||| |||| |||||||||||||   ||||||||| |||| || ||||||||||||||||| ||| ||||||||| ||||||||| || |||||||    
T  4091936 gaaccctaatcaa-agaggtttagttgctaatggcaacatacattataacaaaacaatagaaaaacata-cctagagagaacaagaggaagatggagatc 4092033  T
Q  677 ctcttcctt-taagctctggtgtttgacccttgc 709  Q
    |||| ||||  || ||||| || |||||||||||    
T  4092034 ctctgccttggaacctctgatgcttgacccttgc 4092067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 488 - 669
Target Start/End: Original strand, 12358236 - 12358414
Alignment:
Q  488 catatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtc 587  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||  || ||||  ||| | |||||||| |||||||||||||||||||  | ||    
T  12358236 catatgcaaattaaatcagacacttgaatcataaattgaataaaaa-ctctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatc 12358333  T
Q  588 aatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggag 669  Q
    || ||   |||||||  |||||| |||| ||  ||||||||||||| ||||||| ||| | || |||| ||||| |||||||    
T  12358334 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaacagaaaaacatatcatatagagaacaaggggaggag 12358414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 604 - 693
Target Start/End: Original strand, 17880417 - 17880506
Alignment:
Q  604 gacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctct 693  Q
    ||||||||||||||||||||||||||| ||||  |||| ||||| ||||||| |||| ||||||| ||||||||||| | || |||||||    
T  17880417 gacatggcaacaaacatcattacaaaataataataaaacataccatagagagaacaataggaggatggagatcctctacattaaagctct 17880506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 542 - 655
Target Start/End: Complemental strand, 23126822 - 23126711
Alignment:
Q  542 aattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||||| |||||||||| |||||||| | || ||||| |||| ||||| ||||||   |||||||| ||||||||| |||||||||||||||||    
T  23126822 aattgaatccaaaaaataagaaggggttcatcttaga-ccctaatcaa-agaggcttagttactcatggcaataaacatcataacaaaacaatagaaaaa 23126725  T
Q  642 tataccctagagag 655  Q
     | |||||||||||    
T  23126724 caaaccctagagag 23126711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 515 - 599
Target Start/End: Complemental strand, 2351722 - 2351638
Alignment:
Q  515 atcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggttta 599  Q
    ||||||||||||||||| || || || |||||||||||||||| ||  |||||||||||||||| ||||| ||||||||| ||||    
T  2351722 atcataaactgaataaataattttattaattgaatccaacaaagaaatagaggttcatcatggatccctaatcaatagagattta 2351638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 6272196 - 6272324
Alignment:
Q  43 atttattagaa-gtaaataaaacagtaaagat-aaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgta 140  Q
    ||||||||||| |||||||||| || |||||| |||||||||| | ||||| ||||     || ||||| |||||||||||||||||||| |||  ||||    
T  6272196 atttattagaatgtaaataaaagaggaaagatgaaagtggttgcatggtttaaattgcctggcccaatgtgagattaggttggtttgattcagatacgta 6272295  T
Q  141 acgacgattagaaaatccttgaatccccc 169  Q
    |||||||||||| |||| |||||||||||    
T  6272296 acgacgattagagaatctttgaatccccc 6272324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 530 - 709
Target Start/End: Original strand, 24596397 - 24596576
Alignment:
Q  530 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 629  Q
    |||||||| || ||| |||| |||||||||||||  |||||||| |||||| ||| | || |||||||| ||||  |||  ||||  ||||||||| |||    
T  24596397 aaaaactttattaatagaattcaacaaataagaatgggttcatcgtggaactctaattaa-agaggtttggttgctcataacaaccgacatcattataaa 24596495  T
Q  630 acaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagct-ctggtgtttgacccttgc 709  Q
    |||||| ||||| |||| |||||||| ||||||||| ||  |||||| ||| |||| ||||| ||| || |||||||||||    
T  24596496 acaatataaaaacatacactagagagaacaagaggatgatagagatcatctgccttgaagctcctgatgcttgacccttgc 24596576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 640
Target Start/End: Original strand, 21544253 - 21544400
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagt 586  Q
    ||||||||||||||||||||| | ||  || ||||||  |||||||| ||| |  ||| ||||||||||||||||||| ||||||||||||||||||| |    
T  21544253 acatatacaaattaaatcaga-atttagattataaacaaaataaaaa-ctttagtaatggaatccaacaaataagaaggggttcatcatggaaccctaat 21544350  T
Q  587 caatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaa 640  Q
    ||| ||| |||||||||  |||   |||  | ||||||||||||||||||||||    
T  21544351 caa-agaagtttagttgctcat---aacctatatcattacaaaacaatagaaaa 21544400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 649
Target Start/End: Complemental strand, 20446905 - 20446807
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    |||||||||||||||| || ||||  || ||||||| ||||  || |||||||||  |||||||||| ||||||| ||||||||||||||||| ||||||    
T  20446905 tccaacaaataagaagcggctcattgtgaaaccctaatcaa--gaagtttagttgctcatggcaacatacatcataacaaaacaatagaaaaacataccc 20446808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 669
Target Start/End: Complemental strand, 21472473 - 21472355
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    ||||||||||||||||  ||||||| ||||||| || ||||  ||||||||| ||  |||||||||| |||||||   ||||||||||||||| ||| ||    
T  21472473 tccaacaaataagaaggtgttcatcgtggaaccatattcaa--gaggtttagctgctcatggcaacatacatcatatgaaaacaatagaaaaacatatcc 21472376  T
Q  649 tagagaggacaagaggaggag 669  Q
    ||||||| |||| || |||||    
T  21472375 tagagagaacaaaagaaggag 21472355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 487 - 640
Target Start/End: Original strand, 21536909 - 21537059
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagt 586  Q
    ||||||||||||||||||| | | ||  || ||||||||||||| || ||| |  ||| ||||||| |||||||||||  |||||| ||||||||||| |    
T  21536909 acatatacaaattaaatcata-atttagattataaactgaataagaa-ctttagtaatggaatccatcaaataagaaggagttcataatggaaccctaat 21537006  T
Q  587 caatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaa 640  Q
    ||| | | |||||||||  |||||||||  | ||||||||||||||||||||||    
T  21537007 caa-ataagtttagttgctcatggcaactgatatcattacaaaacaatagaaaa 21537059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 652
Target Start/End: Complemental strand, 315801 - 315717
Alignment:
Q  566 ggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctaga 652  Q
    |||||||| |||||||||| ||||  ||||||||||||  |||||||||| ||||||| ||||| ||||||||||| ||||| ||||    
T  315801 ggttcatcgtggaaccctaatcaa--gaggtttagttgctcatggcaacatacatcataacaaagcaatagaaaaacataccataga 315717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 685
Target Start/End: Complemental strand, 15758147 - 15757983
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    |||||||||||||||| ||| || |||  |||| || |||||||||| ||||||| | |||||| || |||| ||| | ||| |||  ||||| |||  |    
T  15758147 ataaactgaataaaaa-ctttattaatcaaatctaaaaaataagaag-ggttcatgaaggaaccttaatcaa-agaagattatttgttcatggaaaccga 15758051  T
Q  618 catcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||||||||||||| |||||||||||||| ||||||||  ||||||||| || | ||||||||| ||||    
T  15758050 catcattacaaaataatagaaaaatatatcctagagataacaagaggatgatgaagatcctctgcctt 15757983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 680
Target Start/End: Original strand, 22334702 - 22334835
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaata-gaaaaatat 644  Q
    |||||||||||| |||||| |||||||| ||||||| || |||| |||||||| |||| ||||| ||||| ||||| |||||||| |||| |||||| ||    
T  22334702 gaatccaacaaagaagaaggggttcatcgtggaaccataatcaa-agaggttttgttgtacatgacaacatacatctttacaaaa-aataggaaaaacat 22334799  T
Q  645 accctagagaggacaagaggaggagggagatcctct 680  Q
    | | |||| ||  ||||||||| | |||||||||||    
T  22334800 atcttagaaagaccaagaggagaatggagatcctct 22334835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 531 - 651
Target Start/End: Original strand, 20040227 - 20040345
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || | ||||||| ||||||||||||| |||||||  | |||||||| |||  ||||||||| |||  ||||| |||| ||||||| ||||||    
T  20040227 aaaactttattagttgaatctaacaaataagaaggggttcatagttgaaccctaatca--agaggtttatttgctcatggaaacatacatcataacaaaa 20040324  T
Q  631 caatagaaaaatataccctag 651  Q
    ||| | ||||| |||||||||    
T  20040325 caaaataaaaacataccctag 20040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 566 - 668
Target Start/End: Complemental strand, 7142725 - 7142625
Alignment:
Q  566 ggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagagga 665  Q
    |||||||| |||||||||  ||||  ||||||||||||  |||||||||| |||| || | |||| | || ||||||||||||||||||| ||||||| |    
T  7142725 ggttcatcttggaacccttatcaa--gaggtttagttgctcatggcaacatacattataataaaatattacaaaaatataccctagagagaacaagagaa 7142628  T
Q  666 gga 668  Q
    |||    
T  7142627 gga 7142625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 652
Target Start/End: Complemental strand, 7151561 - 7151466
Alignment:
Q  555 aaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctaga 652  Q
    |||||||||  | ||||||||||||||||| ||||  ||||||||||||  ||||||||||  |||||| |||| | |||| ||||| ||||||||||    
T  7151561 aaataagaatggtttcatcatggaaccctaatcaa--gaggtttagttgctcatggcaacatgcatcataacaatataatataaaaacataccctaga 7151466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 18497100 - 18497054
Alignment:
Q  106 aatgcgagattaggttggtttgatttagaagcgtaacgacgattaga 152  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||    
T  18497100 aatgcgagattaggttggtttgattcatatgcgtaacgacgattaga 18497054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 641
Target Start/End: Complemental strand, 11082235 - 11082144
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    ||||||||||||||||    |||||||| |||||||||| |||| |||||||||| |  ||||| ||||| ||||||| | |||||||||||||||    
T  11082235 gaatccaacaaataagg---ggttcatcgtggaaccctaatcaa-agaggtttagctacacatgacaacacacatcatgaaaaaacaatagaaaaa 11082144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 651
Target Start/End: Original strand, 20050380 - 20050498
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || | ||||||| ||||||||||||| |||||||  |||||||||| |||  ||||||||| |||  ||||| |||| ||||||| |||| |    
T  20050380 aaaactttattagttgaatctaacaaataagaaggggttcatagtggaaccctaatca--agaggtttatttgctcatggaaacatacatcataacaaca 20050477  T
Q  631 caatagaaaaatataccctag 651  Q
     || | ||||| |||||||||    
T  20050478 taaaataaaaacataccctag 20050498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 646
Target Start/End: Complemental strand, 23744686 - 23744526
Alignment:
Q  485 aaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    |||||||||||||||||||||  || |||||| ||||||| ||  | |||||| || |||||||||||||||||||  |||| |||| | | ||||||||    
T  23744686 aaacatatacaaattaaatcaagcaattgaattataaact-aagtagaaactttattaattgaatccaacaaataaatagagattcaacgtagaacccta 23744588  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
     |  | |||||||| ||||  ||| |  ||| ||||||||||| || |||| ||||| ||||    
T  23744587 attgaaagaggtttggttgctcatagtgacatacatcattacagaataatataaaaacatac 23744526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 766
Target Start/End: Complemental strand, 5636721 - 5636669
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatactta 766  Q
    ||||||||| |||  ||||||||||||||||||||||||||||| | ||||||    
T  5636721 tgaatgaataaaagtgtgtgcaagggtctctatttatagtgcatcattactta 5636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 273
Target Start/End: Original strand, 11467061 - 11467229
Alignment:
Q  105 caatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttat 204  Q
    ||||||||||||| |||  ||||||| ||| ||||||||||||||||  ||||||| |||||||  ||  ||||| | | | |||||    ||||  |||    
T  11467061 caatgcgagattaagtttatttgattcagatgcgtaacgacgattagggaatccttaaatccccatttccgtcttagttggaattaatacggttaactat 11467160  T
Q  205 tagtttatgacgtgtcttttgatttaagaaagtagactatgaccctatggtaaagcagtggaagtttta 273  Q
    || |||||||| || ||||||||||| ||||||||| | |||||   || || | ||||||||||||||    
T  11467161 tactttatgacttggcttttgatttacgaaagtagaatttgacctcttgatataacagtggaagtttta 11467229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 708 - 776
Target Start/End: Original strand, 24596589 - 24596657
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaaga 776  Q
    ||||| ||||||||| ||| ||||||||| |||||||||||||| ||||| | ||  ||||||||||||    
T  24596589 gctttctgaatgaataaaagagtgtgcaatggtctctatttataatgcatgattatatacgggttaaga 24596657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 749
Target Start/End: Complemental strand, 21472299 - 21472264
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctattta 749  Q
    ||||||||| ||||||||||||||||||||||||||    
T  21472299 tgaatgaataaaatagtgtgcaagggtctctattta 21472264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 22334285 - 22334376
Alignment:
Q  78 tggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatccccc 169  Q
    |||||| | |||||||||| |||||| |||||||||||||||||   |||||| | ||| ||||||  ||||||  ||||||| ||||||||    
T  22334285 tggttgcagggttttaattgttctgcccaatgcgagattaggttttgttgattcaaaagagtaacggtgattagggaatcctttaatccccc 22334376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 30406685 - 30406639
Alignment:
Q  123 gtttgatttagaagcgtaacgacgattagaaaatccttgaatccccc 169  Q
    |||||||||||||| |||||| |||||||| ||| ||||||||||||    
T  30406685 gtttgatttagaagtgtaacggcgattagagaattcttgaatccccc 30406639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 751
Target Start/End: Original strand, 20040419 - 20040456
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttata 751  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  20040419 tgaatgaataaaatagtgtgcaaggatctctatttata 20040456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 751
Target Start/End: Original strand, 20050572 - 20050609
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttata 751  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  20050572 tgaatgaataaaatagtgtacaagggtctctatttata 20050609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 785
Target Start/End: Original strand, 22334878 - 22334955
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaa 785  Q
    ||||| ||||| ||| ||| ||||| ||| | ||| |||||||||||||| | |||||| |||||||||||| |||||    
T  22334878 gctttctgaattaataaaagagtgttcaatgatctttatttatagtgcatcattacttaggggttaagagaaaaaaaa 22334955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 3e-75; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 289 - 708
Target Start/End: Original strand, 12774028 - 12774442
Alignment:
Q  289 aatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaacca 388  Q
    |||||||||| |||| |||||||||||| ||  | || ||||| |||||||||||| ||||||||| || |||| || |||||   ||||||||| | ||    
T  12774028 aatttaaccagttattattgcggcgttttctatagat-gagtcgaaaccctaaattaatacttagaatcgattaaaacaatttaattaagaaacttagca 12774126  T
Q  389 atttacctatgtcttatttggacggaagtaggattgtcaatcctataatccacctagagatcagttt-catcgttggtttgaaaaagtattagaaacaaa 487  Q
    |||||||  ||  | |    |||||||||||| ||||||||||||||||||| |||||||||| ||| ||| ||||||||||||| | |||||||||       
T  12774127 atttaccactggttca----gacggaagtagggttgtcaatcctataatccatctagagatcatttttcattgttggtttgaaaatgcattagaaacgtg 12774222  T
Q  488 catatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtc 587  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||| ||||||||| || ||||||||| ||||||| |  ||    
T  12774223 catatacaaattaaatcagacacttgaattataaactgaataaaaaactttactaattgaatctaacaaataataaaaggttcatcttggaaccttgatc 12774322  T
Q  588 aatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttccttta 687  Q
    || ||||||||||||| ||||||||||   |||||||||||||||||||||||| |||  |||||||| ||||||| || ||| | ||| ||| |||| |    
T  12774323 aa-agaggtttagttgcacatggcaaccttcatcattacaaaacaatagaaaaacataatctagagagaacaagagtagaaggaaaatcttctgccttga 12774421  T
Q  688 agctctggtgtttgacccttg 708  Q
    || |||| |||||||||||||    
T  12774422 agttctgatgtttgacccttg 12774442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 427 - 670
Target Start/End: Original strand, 28259841 - 28260081
Alignment:
Q  427 aatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacacttgaatcataaactga 526  Q
    |||| ||||||||| ||| |||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||| |||| |||    
T  28259841 aatcttataatccatctatagataagtttcattgttggtttgtaaaagaattagaaacaaacatatacaaattaaatttgacacttgaatcttaaattga 28259940  T
Q  527 ataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattac 626  Q
    ||||||||||| || ||||||||| | |||||||||||||||||||| | |||||||| ||||   ||||||||| | || || ||||  ||||||| |     
T  28259941 ataaaaaactttattaattgaatctatcaaataagaagaggttcatcctagaaccctaatcaa---aggtttagtggcacgtgacaactgacatcatcat 28260037  T
Q  627 aaaacaatagaaaaatataccctagagaggacaagaggaggagg 670  Q
    |||| |||||||||| ||||| ||||||| ||||||||||||||    
T  28260038 aaaataatagaaaaacataccatagagagaacaagaggaggagg 28260081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 326 - 784
Target Start/End: Complemental strand, 28075410 - 28074935
Alignment:
Q  326 tgagtcaaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgt 425  Q
    |||| |||||||||||||||||| |||| ||| |||| ||||||||   | ||||||||| ||||||||   ||||    | ||| |||| | || ||||    
T  28075410 tgagacaaaaccctaaattcataattagtttcgattaaaagaatttaatttagaaactaagcaatttactattgtcaaggtcggatggaactggggttgt 28075311  T
Q  426 caatcctataatccacctagagatcagtttcatcgttggtttgaaaaagt--attagaaacaaacatatacaaattaaatcagacacttgaatcataaac 523  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||||| |  |  ||||   |||||| ||||||||||||  ||| | ||||| |||||    
T  28075310 caatcatataattcacctagatatcagtttcattgttggtttgaaaaacttgaagagaacggaacataaacaaattaaatctaacaatcgaatcgtaaac 28075211  T
Q  524 tgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcat 623  Q
    || || |||||||| || |||||||||||| ||||||||||  ||||||| |||||||||| |||  |||| |||||||  |||||||||   | |||||    
T  28075210 tggatgaaaaactttattaattgaatccaataaataagaaggagttcatcgtggaaccctaatcatgagagatttagttccacatggcaagtgatatcat 28075111  T
Q  624 tacaaaacaata-gaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgaccctt--------------g 708  Q
    ||||||||||||  ||||| |||||||||  || ||||||||||||  |||||||||| || | ||| | || ||||||||||||              |    
T  28075110 tacaaaacaatataaaaaacataccctagtaagaacaagaggaggatagagatcctctgccataaagttatgatgtttgacccttgtcttatactgctag 28075011  T
Q  709 ctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaa 784  Q
    | || ||||||||| ||||||||| ||| |||||||||||||||||||||| |||||| ||||||| |||| ||||    
T  28075010 ccttctgaatgaataaaatagtgtacaaaggtctctatttatagtgcataattacttaggggttaatagaaaaaaa 28074935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 487 - 708
Target Start/End: Original strand, 6887564 - 6887784
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagt 586  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| || || || |||||||| ||||||||| ||||||| ||||| |||||||||| |    
T  6887564 acatatacaaattaaatcagacacttggatcataaactgaataaacaa-tttattaattgaattcaacaaatatgaagaggatcatcgtggaaccctaat 6887662  T
Q  587 caatagaggtttagttggacatggcaacaaacatcattacaaaacaata-gaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||| ||||||||||||| ||||||||||  ||||||||||||||||||| |||||| ||||| |||| || |||| | ||||| | ||||||||  ||||    
T  6887663 caa-agaggtttagttgcacatggcaaccgacatcattacaaaacaataggaaaaacataccttagatagaacaatatgaggatgaagatcctcaacctt 6887761  T
Q  686 taagctctggtgtttgacccttg 708  Q
    |||||| || || ||||| ||||    
T  6887762 taagctatgatgcttgactcttg 6887784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 483 - 670
Target Start/End: Complemental strand, 23876700 - 23876518
Alignment:
Q  483 acaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccc 582  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| || ||||||||||||||||||||||| | |||||| | || |||    
T  23876700 acaaacatatacaaattaaatcagacacttgaattataaattgaataaaaa-ctttattaattgaatccaacaaataagaagtgattcatcttcgagccc 23876602  T
Q  583 tagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagg 670  Q
    ||    |||||||||||||||  ||||| |||| ||||||||||||||||||||||||| ||||| |||| || ||||||||| ||||    
T  23876601 ta----atagaggtttagttgcgcatggaaacatacatcattacaaaacaatagaaaaacataccgtagatagaacaagaggatgagg 23876518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 478 - 709
Target Start/End: Complemental strand, 5154537 - 5154309
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||| |||||||| |||||||||| |||||||||||||||| ||||||||||  || || ||||||||||||||||||| ||| |||||||| |||    
T  5154537 tagaaacagacatatactaattaaatcacacacttgaatcataaattgaataaaaatatttattaattgaatccaacaaataataaggggttcatcgtgg 5154438  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcc 677  Q
    |||| || |||| | |||||||||||  |||| ||||  |||||||| |||||||  ||||||||||||| ||||| | |||| || |||| ||||||||    
T  5154437 aaccttaatcaa-ataggtttagttgctcatgacaaccgacatcattgcaaaaca--agaaaaatataccgtagagtgaacaaaagaaggatggagatcc 5154341  T
Q  678 tcttcctttaagctctggtgtttgacccttgc 709  Q
    ||| |||| ||| |||| || ||| |||||||    
T  5154340 tctaccttaaagttctgatggttggcccttgc 5154309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 478 - 709
Target Start/End: Original strand, 30850406 - 30850633
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    ||||||||||||||  ||||||||||||||| |  ||||||||||   ||||||||  ||  ||||| ||||| || ||||||||||  ||||||| ||     
T  30850406 tagaaacaaacata--caaattaaatcagactcaagaatcataaatcaaataaaaatattattaaat-gaatcaaaaaaataagaaggagttcatcttga 30850502  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcc 677  Q
    |||| || |||| ||||||||||||| ||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||    
T  30850503 aaccttaatcaa-agaggtttagttgcacatgacaactaacaacattacaaaacaatagaaaaacataccctagagagaacaataggaggatggagatcc 30850601  T
Q  678 tcttcctttaagctctggtgtttgacccttgc 709  Q
    ||| |||| || ||||  ||||||||||||||    
T  30850602 tctgccttaaatctcttatgtttgacccttgc 30850633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 375 - 520
Target Start/End: Complemental strand, 14139897 - 14139752
Alignment:
Q  375 taagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaag 474  Q
    ||||||||||| ||||||||   |||||| |||||| | ||||||| |||||||||||||||| ||||||||||| |||||||| | |||||||||||||    
T  14139897 taagaaactaaacaatttactactgtcttgtttggatgaaagtagggttgtcaatcctataattcacctagagattagtttcattgatggtttgaaaaag 14139798  T
Q  475 tattagaaacaaacatatacaaattaaatcagacacttgaatcata 520  Q
     ||| |||||| |||||||||||||||||| |||||| ||||||||    
T  14139797 cattggaaacagacatatacaaattaaatcggacactcgaatcata 14139752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 481 - 680
Target Start/End: Original strand, 27084925 - 27085121
Alignment:
Q  481 aaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaac 580  Q
    ||||| ||||||||||||||||||||||  | || |||||||||||||||||||||| || |||||| |||||||||||| ||  |||||||| || | |    
T  27084925 aaacagacatatacaaattaaatcagactttaga-tcataaactgaataaaaaactttattaattgagtccaacaaataaaaaagggttcatcgtgaagc 27085023  T
Q  581 cctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
    |||| |||| |||||||||||||  |||| ||||  ||||| ||| ||||||||| ||||| ||| | ||  ||| |||||||||||| |||||||||||    
T  27085024 cctaatcaa-agaggtttagttgctcatgacaaccgacatcgttaaaaaacaatataaaaacata-cttaatgagaacaagaggaggatggagatcctct 27085121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 13529473 - 13529642
Alignment:
Q  485 aaacatatacaaattaaatcagaca-cttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccct 583  Q
    ||||||||||||||||||| || |  | ||||||||||| | |||| |||  || || ||||||||| |||||||||| ||| ||| ||| |||||||||    
T  13529473 aaacatatacaaattaaattaggctgcatgaatcataaaataaatagaaacttttattaattgaatc-aacaaataagtagatgtttatcgtggaaccct 13529571  T
Q  584 agtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagaga 654  Q
    | |||||||||||||||||  |||||| ||||||||||||||||||| || |||| ||||||||| |||||    
T  13529572 aatcaatagaggtttagttacacatggtaacaaacatcattacaaaagaaaagaataatataccccagaga 13529642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 13619012 - 13619181
Alignment:
Q  485 aaacatatacaaattaaatcagaca-cttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccct 583  Q
    ||||||||||||||||||| || |  | ||||||||||| | |||| |||  || || ||||||||| |||||||||| ||| ||| ||| |||||||||    
T  13619012 aaacatatacaaattaaattaggctgcatgaatcataaaataaatagaaacttttattaattgaatc-aacaaataagtagatgtttatcgtggaaccct 13619110  T
Q  584 agtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagaga 654  Q
    | |||||||||||||||||  |||||| ||||||||||||||||||| || |||| ||||||||| |||||    
T  13619111 aatcaatagaggtttagttacacatggtaacaaacatcattacaaaagaaaagaataatataccccagaga 13619181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 546 - 692
Target Start/End: Complemental strand, 18771629 - 18771484
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    ||||||||||||||||||| | |||||| ||||| |||| |||| ||||| ||||||   |||||||||  ||||||||||||||||||||||||| |||    
T  18771629 gaatccaacaaataagaagggcttcatcgtggaatcctaatcaa-agaggattagtttatcatggcaaccgacatcattacaaaacaatagaaaaagata 18771531  T
Q  646 ccctagagaggacaagaggaggagggagatcctcttcctttaagctc 692  Q
    | |||||||| |||| | ||||| ||||||| ||| |||| ||||||    
T  18771530 ctctagagagaacaaaatgaggatggagatcatctaccttgaagctc 18771484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 478 - 678
Target Start/End: Original strand, 28290718 - 28290914
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||  || ||||  || || |||||||||||||||||||| || |||||||| |      
T  28290718 tagaaacagagatatacaaattaaatcagacacttgaatcaaaaactacattaaaatttttattaattgaatccaacaaataagtag-ggttcatcgtat 28290816  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcc 677  Q
    ||||||| | ||   ||||||||||| ||||  |||||  || || |||||||||| ||||||  | |||||||||||  ||| ||||||| ||||||||    
T  28290817 aaccctaataaa---aggtttagttgcacatcacaacatgcaacaatacaaaacaaaagaaaaccacaccctagagagagcaataggaggatggagatcc 28290913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 524 - 703
Target Start/End: Original strand, 24927249 - 24927430
Alignment:
Q  524 tgaataaa-aaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatca 622  Q
    |||||||| |||||| || |||||||||||| ||||||||| | ||||||| | |||||| | || | ||||||| |||||  ||| ||||    |||||    
T  24927249 tgaataaataaactttattaattgaatccaaaaaataagaataagttcatcttagaacccaaatcgagagaggttcagttgctcatagcaaatggcatca 24927348  T
Q  623 ttacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagct-ctggtgtttgac 703  Q
    ||||||||||||||||||| |||||||| |||| ||||| |||||| | ||||||||  |||| ||||| ||||||||||||    
T  24927349 ttacaaaacaatagaaaaacataccctaaagagaacaaggggaggatgaagatcctccaccttgaagctcctggtgtttgac 24927430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 518 - 709
Target Start/End: Complemental strand, 11438122 - 11437933
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    |||||||||||||| | ||| || ||| ||||||||||||||||||| |||||||| |  |||| || |||| ||| | ||||||| |||||| || | |    
T  11438122 ataaactgaataaata-ctttattaatagaatccaacaaataagaaggggttcatcgttaaacc-taatcaa-agatgcttagttgcacatggaaatata 11438026  T
Q  618 catcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctc-tggtgtttgacccttgc 709  Q
    ||||||||||| |||||| ||||| |||||||| |||| ||||||| |||| ||||||||||| | || |||||| || || |||||||||||    
T  11438025 catcattacaagacaataaaaaaacataccctacagagaacaagagaaggatggagatcctctgctttgaagctcatgatgcttgacccttgc 11437933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 546 - 685
Target Start/End: Complemental strand, 24120953 - 24120818
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    |||||||||||||||||||  ||||||| |||||||||  |||| |||||||||||||  |||||||||| |||||||||  |||||||  ||||| |||    
T  24120953 gaatccaacaaataagaaggagttcatcttggaaccctgatcaa-agaggtttagttg--catggcaacatacatcattaacaaacaat-taaaaaaata 24120858  T
Q  646 ccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    || ||||||| ||||||||||||  |||||||||| ||||    
T  24120857 ccgtagagagaacaagaggaggatagagatcctctgcctt 24120818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 549 - 649
Target Start/End: Original strand, 29046726 - 29046824
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    |||||||||||||||| |||||||| |||||||||| |||| |||  |||||||   |||||||||||||||||| |||||| ||||| |||||||||||    
T  29046726 tccaacaaataagaaggggttcatcgtggaaccctaatcaaaaga--tttagtttctcatggcaacaaacatcataacaaaataatagtaaaatataccc 29046823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 532 - 668
Target Start/End: Complemental strand, 32239973 - 32239839
Alignment:
Q  532 aaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaac 631  Q
    |||||| || |||||||||||||||||||||||||||||||| |  ||||||| |||  |||||||||||||  ||   ||||| ||||||| ||||| |    
T  32239973 aaactttattaattgaatccaacaaataagaagaggttcatcttaaaaccctaatca--agaggtttagttgctcacaacaacagacatcataacaaatc 32239876  T
Q  632 aatagaaaaatataccctagagaggacaagaggagga 668  Q
    |||||||||| || | ||||| || ||||||||||||    
T  32239875 aatagaaaaacatgctctagaaagaacaagaggagga 32239839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 409 - 592
Target Start/End: Original strand, 35134862 - 35135047
Alignment:
Q  409 gacggaagtaggattgtcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagt-attaga-aacaaacatatacaaattaaatcag 506  Q
    ||||| |||||| ||||||||| |  || |||| ||||||||| |||| |  ||||||| ||| ||  |||||| |||| |||||||||| ||||||| |    
T  35134862 gacgggagtaggtttgtcaatcttgcaacccacatagagatcaatttcttttttggtttaaaagaggcattagagaacatacatatacaatttaaatccg 35134961  T
Q  507 acacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatag 592  Q
    | | || |||||||||||| || |||||||| || ||||||||||||||||||| ||| ||||  || |||||||||| |||||||    
T  35134962 aaaattaaatcataaactggatgaaaaactttattaattgaatccaacaaataaaaaggggtttgtcgtggaaccctaatcaatag 35135047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 550 - 660
Target Start/End: Complemental strand, 13305091 - 13304983
Alignment:
Q  550 ccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccct 649  Q
    ||||||||||||||| |||||||| | ||| |||| ||||  ||||||||||||   ||||||||  ||||||| | |||||||||||||||||||||||    
T  13305091 ccaacaaataagaaggggttcatcgtagaaacctaatcaa--gaggtttagttgcttatggcaaccgacatcataagaaaacaatagaaaaatataccct 13304994  T
Q  650 agagaggacaa 660  Q
    |||||| ||||    
T  13304993 agagagaacaa 13304983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 495 - 602
Target Start/End: Complemental strand, 14184668 - 14184562
Alignment:
Q  495 aaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagag 594  Q
    |||||||||| |||| ||||| |||||||| | | |||||||| || |||||||||||||||||||||||||| ||||  |||||| ||| |||| ||||    
T  14184668 aaattaaatctgacaattgaaacataaactaagtgaaaaactttattaattgaatccaacaaataagaagaggatcatagtggaactctaatcaa-agag 14184570  T
Q  595 gtttagtt 602  Q
    ||||||||    
T  14184569 gtttagtt 14184562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 551 - 641
Target Start/End: Complemental strand, 30544424 - 30544335
Alignment:
Q  551 caacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||||||||| ||||||||||||||||| |||| | ||||| |||||  ||||||||| | |||||||||||||||||| |||||    
T  30544424 caacaaataagaagagattcatcatggaaccctaatcaa-ataggttcagttgctcatggcaaccaccatcattacaaaacaataaaaaaa 30544335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 542 - 709
Target Start/End: Complemental strand, 24094856 - 24094693
Alignment:
Q  542 aattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    ||||||||||||||||||||||| | || ||| | ||||| || ||||  ||||||||||||  ||||| ||||||||| || ||||||||||||| |||    
T  24094856 aattgaatccaacaaataagaagggattaatcttagaaccgtaatcaa--gaggtttagttgctcatggaaacaaacatgataacaaaacaatagagaaa 24094759  T
Q  642 tataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgc 709  Q
     |||| ||||| |  ||||||||||||  |||||  ||| |||| || || || ||||||||||||||    
T  24094758 catactctagacaaaacaagaggaggatagagat--tctgccttgaaactttgatgtttgacccttgc 24094693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 106 - 371
Target Start/End: Original strand, 28259539 - 28259802
Alignment:
Q  106 aatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttatt 205  Q
    |||||||||||| |||| | ||||| ||||   |||||  ||||||| |||||||||||||||  | || |||||| | | ||| | |  | || ||| |    
T  28259539 aatgcgagattatgttgttatgattcagaattataacggtgattagagaatccttgaatcccctctcttttctttgttggaattcatgcggctaattact 28259638  T
Q  206 agtttatgacgtgtcttttgatttaagaaagtagactatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataa 305  Q
    ||||||||||  |||||  ||||||| |||||||  ||||||||  || |  |||| ||||||||||| ||| | ||| | |||||||||||| ||||||    
T  28259639 agtttatgaccagtcttg-gatttaaaaaagtaggatatgaccccgtgatgtagcaatggaagttttaattttatatcgccgcaatttaaccagttataa 28259737  T
Q  306 ttgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattt 371  Q
    ||||  |||| |||||| || |||| ||||| ||||||||||||| |||||| |||| ||||||||    
T  28259738 ttgcaacgttcccttaagat-gagttaaaactctaaattcatactaagattcgattaaaagaattt 28259802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 662
Target Start/End: Complemental strand, 12957204 - 12957090
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    ||||||||||||||||||   |||||  | ||| |||| |||| ||||||||||||| |||||| || ||||||||| |||||||| |||||||| ||||    
T  12957204 aatccaacaaataagaaggcattcattttagaatcctaatcaa-agaggtttagttgcacatggtaataaacatcataacaaaacattagaaaaacatac 12957106  T
Q  647 cctagagaggacaaga 662  Q
    |||| |||| ||||||    
T  12957105 cctatagagaacaaga 12957090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 668
Target Start/End: Original strand, 15213173 - 15213297
Alignment:
Q  542 aattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||||||| |||||||| | |||||| | ||||| || ||||  || |||||||||  ||||| |||||||||||| |||||| ||| ||||||    
T  15213173 aattgaatccaacagataagaagggattcatcttagaaccataatcaa--gatgtttagttgctcatggaaacaaacatcataacaaaataattgaaaaa 15213270  T
Q  642 tataccctagagaggacaagaggagga 668  Q
     |||||||||| || ||| ||||||||    
T  15213271 cataccctagaaagaacatgaggagga 15213297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 591 - 685
Target Start/End: Original strand, 16051760 - 16051855
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatag-aaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||| ||||||||| |||| | |||||  |||||||||| ||||    
T  16051760 agaggtttagtttcacatggcaacaaacatcataacaaaacaatagaaaaaacatatcctagagagaacaaaatgaggatagagatcctctacctt 16051855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 655
Target Start/End: Original strand, 28900714 - 28900849
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||| |||||||| || |||   || |||||||||||||| |||||||| |||||||  | ||||  ||||||||||||  ||  ||||||     
T  28900714 cataaactgaatgaaaaactttattaataatattcaacaaataagaaggggttcatcgtggaaccgaa-tcaa--gaggtttagttgctcagtgcaacag 28900810  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagag 655  Q
    ||||||| ||||||||||||||||| ||| |||||||||    
T  28900811 acatcataacaaaacaatagaaaaacatatcctagagag 28900849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 692
Target Start/End: Complemental strand, 29292606 - 29292406
Alignment:
Q  489 atatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtca 588  Q
    ||||||||||||||||| ||  | || ||||||||||||||||||| || || |||||||| ||||| |||||||  |||||||  |||||| |   ||     
T  29292606 atatacaaattaaatcatactttaga-tcataaactgaataaaaaaatttattaattgaattcaacatataagaaagggttcattgtggaactcatatc- 29292509  T
Q  589 atagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaa 688  Q
    |||||||||||| || ||||| ||||   |||||||||| ||||||| ||||| | ||||||||||| ||||||| | || |  |||| |||||||| ||    
T  29292508 atagaggtttagatgcacatgacaaccggcatcattacagaacaata-aaaaaaacaccctagagagaacaagagaatgatgctgatcttcttccttgaa 29292410  T
Q  689 gctc 692  Q
    ||||    
T  29292409 gctc 29292406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 650
Target Start/End: Original strand, 13583029 - 13583133
Alignment:
Q  545 tgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatat 644  Q
    ||||||||||| |||||||| | |||||  |||||||||| | || |||| |||||||   |||| |||||||||||||||||||||||| |||||| ||    
T  13583029 tgaatccaacatataagaagggtttcattgtggaaccctaatgaa-agagatttagttactcatgacaacaaacatcattacaaaacaatggaaaaacat 13583127  T
Q  645 acccta 650  Q
    ||||||    
T  13583128 acccta 13583133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 13581946 - 13582038
Alignment:
Q  74 aaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcc 166  Q
    |||||||||| ||||||| |||| | || | |||||||||||||||||  | ||||| ||||| ||||||||| ||||| |||||||||||||    
T  13581946 aaagtggttgcaaggtttcaattgtcctacccaatgcgagattaggttattgtgattcagaagtgtaacgacgtttagagaatccttgaatcc 13582038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 646
Target Start/End: Original strand, 11308221 - 11308348
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||| ||| |||||||| || |||   ||||||||||||||||| |||||||| ||||||| |  |||  | ||||||| |||  |||| ||||||    
T  11308221 cataaactaaatgaaaaactttattaataatatccaacaaataagaaggggttcatcttggaacctttttca--aaaggtttatttgctcatgacaacaa 11308318  T
Q  617 acatcattacaaaacaatagaaaaatatac 646  Q
    ||||||| |||||| |||||||||| ||||    
T  11308319 acatcataacaaaataatagaaaaacatac 11308348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 201 - 362
Target Start/End: Original strand, 6887297 - 6887457
Alignment:
Q  201 ttattagtttatgacgtgtcttttgatttaagaaagtagactatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaat 300  Q
    ||||||||||||||  ||| ||| ||||||||||| |||| ||||||||  || |  |  ||||||||||||| ||| | ||  |  ||||| ||||| |    
T  6887297 ttattagtttatgaaatgtgtttcgatttaagaaactagaatatgaccccgtgatgtattagtggaagttttattttaatatttccacaattcaaccagt 6887396  T
Q  301 tataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaatta 362  Q
    || ||| |||| ||| |||||| || ||||||||||||||||||||||| ||||||| ||||    
T  6887397 tacaatggcggtgttcccttaagat-gagtcaaaaccctaaattcatacatagattcgatta 6887457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 567 - 668
Target Start/End: Original strand, 22892678 - 22892779
Alignment:
Q  567 gttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaa--tagaaaaatataccctagagaggacaagagg 664  Q
    ||||||| |||||||||| ||||  ||||||||||||  |||||||||| ||||||  |||||| ||  |||||||| ||||||||||||| |||||||     
T  22892678 gttcatcttggaaccctaatcaa--gaggtttagttgctcatggcaacagacatcagaacaaaaaaaaatagaaaaacataccctagagagaacaagaga 22892775  T
Q  665 agga 668  Q
    ||||    
T  22892776 agga 22892779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 8541800 - 8541721
Alignment:
Q  89 ttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccc 168  Q
    ||||||||||||||| |||||||||||||||||| | ||||| | |||  |||||| ||||||  ||||| |||||||||    
T  8541800 ttttaattattctgcccaatgcgagattaggttgttgtgattgaaaagtataacgaagattagggaatccatgaatcccc 8541721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 606 - 678
Target Start/End: Complemental strand, 23893735 - 23893663
Alignment:
Q  606 catggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcct 678  Q
    |||||||||| ||| ||| |||||||||||||| ||  ||| |||||||| |||| ||||||| |||||||||    
T  23893735 catggcaacatacaacataacaaaacaatagaataacctactctagagagaacaataggaggatggagatcct 23893663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 24926781 - 24926873
Alignment:
Q  74 aaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcc 166  Q
    |||||||||| | |||||||||| | |||| |||| | ||||||||||||| ||||| ||| | |||| | |||||||  |||||||||||||    
T  24926781 aaagtggttgcagggttttaattgtcctgcccaatacaagattaggttggtgtgattcagatgtgtaatggcgattagggaatccttgaatcc 24926873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 238
Target Start/End: Original strand, 35134691 - 35134726
Alignment:
Q  203 attagtttatgacgtgtcttttgatttaagaaagta 238  Q
    ||||||||||||| ||||||||||||||||||||||    
T  35134691 attagtttatgacatgtcttttgatttaagaaagta 35134726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 778
Target Start/End: Complemental strand, 30544242 - 30544180
Alignment:
Q  716 aatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagaga 778  Q
    ||||||| ||| ||||||||| | ||||||||||||||| || | |||||| |||||||||||    
T  30544242 aatgaataaaagagtgtgcaatgatctctatttatagtgtatgattacttaggggttaagaga 30544180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 751
Target Start/End: Complemental strand, 26882782 - 26882745
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttata 751  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  26882782 tgaatgaataaaatagtgggcaagggtctctatttata 26882745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 35134820 - 35134861
Alignment:
Q  326 tgagtcaaaaccctaaattcatacttagattcaattagaaga 367  Q
    |||||||||||| | |||||||||||||||||||||| ||||    
T  35134820 tgagtcaaaaccatgaattcatacttagattcaattaaaaga 35134861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 3e-72; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 412 - 706
Target Start/End: Complemental strand, 31314376 - 31314083
Alignment:
Q  412 ggaagtaggattgtcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacact 511  Q
    ||||||| | |||||||||||||||||||| |||| |  | ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  31314376 ggaagtaaggttgtcaatcctataatccacttagatactaatttcatcattggtttgaaaaagcattagaaacgaacatatacaaattaaatcagacact 31314277  T
Q  512 tgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggc 611  Q
    | ||||||| | |||||||||||||| || |||||||||||||||| ||||||||| ||||| |||||||||| |||| ||||||||| ||  |||||      
T  31314276 taaatcatacattgaataaaaaactttattaattgaatccaacaaacaagaagaggctcatcttggaaccctaatcaagagaggtttattttcacatgaa 31314177  T
Q  612 aacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgaccct 706  Q
    ||||||||||||||| |||||||||||||| | ||| ||||||| |||||| | ||| ||||||||||| ||||  ||||||| || ||||||||    
T  31314176 aacaaacatcattac-aaacaatagaaaaacaaaccatagagagaacaagatggggatggagatcctctgccttgcagctctgatggttgaccct 31314083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 114 - 610
Target Start/End: Original strand, 23420645 - 23421136
Alignment:
Q  114 attaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatg 213  Q
    ||||||||||||||||| ||| ||||||| ||||| ||  |||||| ||||||||  ||  ||||||| | | ||||| |   ||| |||| | |||||     
T  23420645 attaggttggtttgattcagatgcgtaacaacgataagggaatcctagaatccccgcttccgtctttgttggaattaatgtgcttaattataa-tttatt 23420743  T
Q  214 acgtgtcttttgatttaagaaagtagact-atgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggc 312  Q
    || ||||||| |||||| |||| |||| | |||||||  || || || |||| |||||||| ||| | ||| | |||||| ||||||||| || ||||||    
T  23420744 acttgtctttggatttatgaaattagaattatgaccccttgatatagtagtgaaagttttatttttatatcgccgcaattcaaccaattacaaatgcggc 23420843  T
Q  313 gtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacg 412  Q
    ||| |||||| || |||||||| |||||||||||||||||||||| |||| ||||||||   | ||||||||| |||||||   ||||| |  |  || |    
T  23420844 gttcccttaagat-gagtcaaa-ccctaaattcatacttagattcgattaaaagaatttaattgagaaactaagcaatttattaatgtcatggtcagagg 23420941  T
Q  413 gaagtaggattgtcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattaga-aacaaacatatacaaattaaatcagacact 511  Q
    |||||||  || |||| ||||||||||||||||||| ||  |||||| |||||| ||||||| |||||| ||||||||||||||||| ||||| ||||||    
T  23420942 gaagtagagttctcaaacctataatccacctagagagcatattcatcattggttcgaaaaagcattagagaacaaacatatacaaatcaaatctgacact 23421041  T
Q  512 tgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatgg 610  Q
    |||||||||||||||||||||||||| || ||||||||     ||| |||||| |||||||| |||||||||| |||| ||||||||||||| ||||||    
T  23421042 tgaatcataaactgaataaaaaactttattaattgaat----aaaaaaagaagtggttcatcgtggaaccctaatcaagagaggtttagttgcacatgg 23421136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 478 - 656
Target Start/End: Original strand, 19257314 - 19257490
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||| |||||||||| |||||||||||  || ||||||||||||||||||||  || || ||||||||||||||||||||||| |||||||| |||    
T  19257314 tagaaacatacatatacaagttaaatcagact-ttaaatcataaactgaataaaaatatttattaattgaatccaacaaataagaaggggttcatcttgg 19257412  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagagg 656  Q
    ||||||| |||| |||||||||||||  |||| ||||  ||||||||||||||||||||||||| ||||| ||| ||||    
T  19257413 aaccctaatcaa-agaggtttagttgctcatgacaaccgacatcattacaaaacaatagaaaaacataccatagtgagg 19257490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 41 - 481
Target Start/End: Original strand, 34931905 - 34932347
Alignment:
Q  41 gaatttattagaagtaaataaaacagtaaagataa-agtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgt 139  Q
    ||||||||||||||||||||||| |  |||||| | |||||||| | ||||||||||  | ||| |||||||| |||||||||||| |||| |   ||||    
T  34931905 gaatttattagaagtaaataaaatataaaagatgagagtggttgcagggttttaattggtttgctcaatgcgatattaggttggttggattcaagtgcgt 34932004  T
Q  140 aacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatgacgtgtcttttgatttaagaaagtag 239  Q
    | || ||||||   ||||||| |||||||  ||| ||||||| | | ||||  | ||||  |||||||||||||||  |||||||||||||  ||| |||    
T  34932005 agcggcgattaaggaatccttaaatccccactttcgtctttgttggaattattgttgttgattattagtttatgacccgtcttttgatttacaaaaatag 34932104  T
Q  240 act-atgaccc-tatggtaaagcagtggaagttttagtttc-agatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaac 336  Q
    | | ||||||| |||| || || ||||||||||||| |||  | ||| |  ||||| ||| | ||| ||||  || |||||||||| ||| |||||||||    
T  34932105 aattatgacccctatgatatagaagtggaagttttattttttatatcgccacaattcaactagttacaattcgggtgtttccttaagatt-agtcaaaac 34932203  T
Q  337 cctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctataa 436  Q
    ||||||||||||||| ||||| |||| ||||||||   | ||||| ||| |||| |||   |||| |  ||||||| ||||||| || ||||||||||||    
T  34932204 cctaaattcatactt-gattcgattataagaatttaattgagaaattaagcaatatactactgtcatggttggacgaaagtagggttatcaatcctataa 34932302  T
Q  437 tccacctagagatcagtttcatcgttggtttgaaaaagtattaga 481  Q
    |||||| | ||||||||||||||||| ||||||||||| ||||||    
T  34932303 tccacccacagatcagtttcatcgttagtttgaaaaagcattaga 34932347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 532 - 709
Target Start/End: Complemental strand, 50047799 - 50047622
Alignment:
Q  532 aaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa-catcattacaaaa 630  Q
    |||||| || ||||||||||||||||||||||| |||||||| |  ||| ||| |||| |||||||||||||  |||||||||||| |||||||||||||    
T  50047799 aaactttattaattgaatccaacaaataagaaggggttcatcttataactctaatcaa-agaggtttagttgctcatggcaacaaaacatcattacaaaa 50047701  T
Q  631 caatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgc 709  Q
    ||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||  | ||||  ||||||||||||||    
T  50047700 caatataaaaacataccctagagagaacaagaggaggatggagatccccttccttggaactctaatgtttgacccttgc 50047622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 530 - 685
Target Start/End: Original strand, 11984622 - 11984776
Alignment:
Q  530 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 629  Q
    |||||||| || ||| ||||||||||||||||||| |||| ||| | |||||||| |||| ||||||||||||| ||||||||||| |||||||  ||||    
T  11984622 aaaaacttaattaatggaatccaacaaataagaaggggtttatctttgaaccctaatcaa-agaggtttagttgcacatggcaacatacatcatcgcaaa 11984720  T
Q  630 acaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    |||| ||||||||||| | ||||||| |||||||||||| ||||||||||| ||||    
T  11984721 acaaaagaaaaatatatcttagagagaacaagaggaggatggagatcctctgcctt 11984776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 542 - 685
Target Start/End: Complemental strand, 34533331 - 34533189
Alignment:
Q  542 aattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    ||||||||||||||||||||||| ||| |||| | |||||||| |||| ||||||||||||| ||||| | |||||||||||  ||||||||| ||||||    
T  34533331 aattgaatccaacaaataagaaggggtccatcttagaaccctaatcaa-agaggtttagttgcacatgacgacaaacatcataccaaaacaatcgaaaaa 34533233  T
Q  642 tataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
     ||||||||||||| |||||||||||| | ||||||||||||||    
T  34533232 cataccctagagagaacaagaggaggatgaagatcctcttcctt 34533189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 40 - 344
Target Start/End: Original strand, 33175580 - 33175881
Alignment:
Q  40 ggaatttattagaagtaaataaaacagtaaagataaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgt 139  Q
    |||||||||||||||||||||||  |  | |||||||| ||| |||||||||||||| | | || |||| |||||||| |||||||||| | ||| ||||    
T  33175580 ggaatttattagaagtaaataaactaaaagagataaagcggtggtaaggttttaattgtcccgctcaatacgagattatgttggtttgactcagatgcgt 33175679  T
Q  140 aacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatgacgtgtcttttgatttaagaaagtag 239  Q
    |||||||||||| |||||||||||||||| |||   |||||| | | ||||| |  |||| ||||||||||||||| |||| |||||||||  ||| |||    
T  33175680 aacgacgattaggaaatccttgaatcccc-attccttctttgttggaattaatgcggttaattattagtttatgacttgtc-tttgatttacaaaattag 33175777  T
Q  240 actatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataa-ttgcggcgtttccttaaaattgagtcaaaaccc 338  Q
    | |||||||   || || |||||||||||||||| ||| | ||  | |||||||||| | |||||| ||| | |||| |||||| | |||||||||||||    
T  33175778 aatatgacctcgtgatagagcagtggaagttttaattt-atattgccgcaatttaactagttataatttgtgacgttcccttaaga-tgagtcaaaaccc 33175875  T
Q  339 taaatt 344  Q
    ||||||    
T  33175876 taaatt 33175881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 478 - 714
Target Start/End: Original strand, 14744799 - 14745030
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||||||||||||||||||||| ||||  | ||  ||||||||||||||     ||  |||||  ||||||| ||||||||| | ||||||| |||    
T  14744799 tagaaacaaacatatacaaattaaattagactttagag-cataaactgaataatt---tttttaaatgaaatccaataaataagaaaaagttcatcttgg 14744894  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcc 677  Q
    |||||||||||| ||||||||||||| ||||| ||||  ||||||||||||||||||||||||| ||| | ||||||| |||||| ||||| | |||||     
T  14744895 aaccctagtcaa-agaggtttagttgcacatgacaaccgacatcattacaaaacaatagaaaaacatatcatagagagaacaagaagaggatgcagatca 14744993  T
Q  678 tcttcctttaagctctggtgtttgacccttgctttat 714  Q
    |||  ||| |||||| | || ||||||||||| ||||    
T  14744994 tctgtcttgaagctcagatgcttgacccttgccttat 14745030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 531 - 678
Target Start/End: Complemental strand, 30676137 - 30675992
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || ||||||||||||||||||||||| |||||||| | ||||| || ||||  || ||| |||||  |||||||||||||||||| ||||||    
T  30676137 aaaactttattaattgaatccaacaaataagaaggggttcatcttcgaaccttaatcaa--gaagttaagttgctcatggcaacaaacatcataacaaaa 30676040  T
Q  631 caatagaaaaatataccctagagaggacaagaggaggagggagatcct 678  Q
    ||||||||||| |||||||||||||   |||||||||| |||||||||    
T  30676039 caatagaaaaacataccctagagagactaagaggaggatggagatcct 30675992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 521 - 712
Target Start/End: Original strand, 15416431 - 15416620
Alignment:
Q  521 aactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacat 620  Q
    |||| |||| ||||||| || | |||||||||||||||||| ||||||||||| |||||||||| | |||||||||||||||  ||||| ||||  ||||    
T  15416431 aacttaatagaaaactttattagttgaatccaacaaataagtagaggttcatcgtggaaccctaattaatagaggtttagttacacatgacaaccgacat 15416530  T
Q  621 cattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgcttt 712  Q
    | ||||||||||| ||||||| |||||  |||||| |||| ||||||| | | | ||||| |||| |||||||| || ||||||||||||||    
T  15416531 ctttacaaaacaagagaaaaacataccaaagagagaacaa-aggagga-gaaaaccctctcccttgaagctctgatgcttgacccttgcttt 15416620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 518 - 685
Target Start/End: Complemental strand, 21549370 - 21549208
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    |||||||||||||||| ||  || ||| ||||||||||||||||||| | |||||| ||||||||||    | |||| ||||||||  |||| || |  |    
T  21549370 ataaactgaataaaaa-ctgtattaatagaatccaacaaataagaagggtttcatcgtggaacccta----aaagagatttagttgttcatgacagccga 21549276  T
Q  618 catcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||    
T  21549275 catcattacaaaacaatagaaaaacataccctagagagaacaagaggaggatggagatcctctgcctt 21549208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 532 - 685
Target Start/End: Original strand, 11769405 - 11769557
Alignment:
Q  532 aaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaac 631  Q
    |||||| || ||||||||||||||||||||||| |||||||| | |||||||| | || | ||||||||||| |||||| ||||  |||||| |||||||    
T  11769405 aaactttattaattgaatccaacaaataagaaggggttcatcttagaaccctaataaaaa-aggtttagttgcacatggaaacattcatcataacaaaac 11769503  T
Q  632 aatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    |||| ||||| | ||| ||||||| | |||||||||| ||||||||||||||||    
T  11769504 aatataaaaacacaccatagagagaaaaagaggaggatggagatcctcttcctt 11769557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 591 - 786
Target Start/End: Complemental strand, 25778389 - 25778179
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagc 690  Q
    ||||||||| ||| ||||  ||||||| ||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||| ||||||||| ||||    
T  25778389 agaggtttaattgcacataacaacaaatatcattacaaaacaatagaaaaacataccctagagagaacgagaggaggatggagatgctcttccttgaagc 25778290  T
Q  691 t-ctggtgtttgacccttg--------------ctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaag 775  Q
    | | | |||||||||||||              |||||| ||||||| ||| ||||||||| |||||||||||||||||||| | |||||| | |||||     
T  25778289 tccagatgtttgacccttgccttgtactgttatctttataaatgaataaaagagtgtgcaaaggtctctatttatagtgcattattacttaagagttaat 25778190  T
Q  776 agaagaaaaat 786  Q
    ||| |||||||    
T  25778189 agaggaaaaat 25778179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 517 - 663
Target Start/End: Complemental strand, 12810883 - 12810740
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||| |||| ||| || ||||  |||||||||||||||||  |||||||||||||||||| ||||  ||||||| ||||  |||||||||||    
T  12810883 cataaactgaatgaaaa-ctttattaattatatccaacaaataagaaggagttcatcatggaaccctaatcaa--gaggttttgttgctcatggcaacaa 12810787  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagag 663  Q
    || |||| |||||| |||||||||  |||||||| |||| |||||||    
T  12810786 acgtcataacaaaataatagaaaagcataccctaaagagaacaagag 12810740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 499 - 635
Target Start/End: Original strand, 34933397 - 34933537
Alignment:
Q  499 taaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccct----agtcaatagag 594  Q
    |||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||   ||||||| |    | |||| ||||    
T  34933397 taaatctgacatgtgaatcataaactgaataaaaaacttaattaattgaatccaacaaataagaaggggttcaatgtggaaccttgatcaatcaagagag 34933496  T
Q  595 gtttagttggacatggcaacaaacatcattacaaaacaata 635  Q
    || |||||| ||||| ||||| |||| ||||||||||||||    
T  34933497 gtatagttgcacatgacaacatacataattacaaaacaata 34933537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 532 - 707
Target Start/End: Complemental strand, 23224087 - 23223915
Alignment:
Q  532 aaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaac 631  Q
    |||||| || || ||||| ||||| |||||||| |||||||| | |||||| | |||| ||||||||| ||   |||| ||||| |||||||||||||||    
T  23224087 aaactttattaactgaatgcaacatataagaaggggttcatcttagaacccaaatcaa-agaggtttatttccgcatgacaacatacatcattacaaaac 23223989  T
Q  632 aatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgaccctt 707  Q
    |||||||||| ||||||||||||  || ||||||||| | ||||||||| ||||  | ||||| || |||||||||    
T  23223988 aatagaaaaacataccctagaga--actagaggaggatgaagatcctctgccttggaactctgatgcttgaccctt 23223915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 489 - 757
Target Start/End: Original strand, 25665148 - 25665430
Alignment:
Q  489 atatacaaattaaatcagacacttgaatcataaact-gaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtc 587  Q
    ||||||||||||| ||||||  | || | ||||||| ||| ||||||||| || ||| |||| |||||||||||||| |||||||| ||||||| || ||    
T  25665148 atatacaaattaactcagactttagatt-ataaactcgaaaaaaaaactttatcaatagaattcaacaaataagaaggggttcatcgtggaaccttaatc 25665246  T
Q  588 aatagaggtttagttggacatggcaacaaacatcattacaaa-acaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttccttt 686  Q
    || |||||||||||||   | || ||| |||||||||| ||| | |||||||||  ||| ||||||||| |||||||||||| ||||||| ||| ||||     
T  25665247 aa-agaggtttagttgctaaaggaaaccaacatcattaaaaacaaaatagaaaac-atatcctagagagaacaagaggaggatggagatcatctgccttg 25665344  T
Q  687 aagctc-tggtgtttgacccttg--------------ctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcat 757  Q
    |||||| || || ||||||||||              |||||||||||||| ||| | |||||||||||||||||||| |||||||    
T  25665345 aagctcatgatgcttgacccttgtcttgtactgctagctttatgaatgaattaaaaattgtgcaagggtctctatttacagtgcat 25665430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 549 - 663
Target Start/End: Complemental strand, 26658181 - 26658070
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    |||| |||||||||||| |||||||||| |||| || ||||  ||||||||||||  |||| ||||||||||||  ||||||||||| ||||| ||||||    
T  26658181 tccaccaaataagaagacgttcatcatgaaaccttaatcaa--gaggtttagttgctcatgacaacaaacatcacaacaaaacaata-aaaaacataccc 26658085  T
Q  649 tagagaggacaagag 663  Q
    ||||||| |||||||    
T  26658084 tagagagaacaagag 26658070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 678
Target Start/End: Original strand, 52270575 - 52270770
Alignment:
Q  481 aaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagagg-ttcatcatggaa 579  Q
    ||||| |||||||| |||||||||||||  | || | | ||| |||||||||| ||| || ||  |||||||| |||||||||| || |||||| |||||    
T  52270575 aaacatacatatacgaattaaatcagactttagattaa-aaattgaataaaaa-ctttattaaaagaatccaaaaaataagaagggggttcatcgtggaa 52270672  T
Q  580 ccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcct 678  Q
    ||||| |||| | | ||||||||   |||||||||  ||||||||||||||||||||||||| ||   |||||||| |||||||||||| | |||||||    
T  52270673 ccctaatcaa-ataagtttagtttctcatggcaaccgacatcattacaaaacaatagaaaaacatcatctagagagaacaagaggaggatgaagatcct 52270770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 591 - 667
Target Start/End: Original strand, 15298333 - 15298409
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggagg 667  Q
    ||||||||||||| |||||  |||| ||||||||||||||||| ||||||  ||||||||||||| |||||||||||    
T  15298333 agaggtttagttgcacatgataacatacatcattacaaaacaaaagaaaagcataccctagagagaacaagaggagg 15298409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 630
Target Start/End: Original strand, 13807178 - 13807320
Alignment:
Q  488 catatacaaattaaatca-gacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagt 586  Q
    |||||||||||||||||| |  | |||||||||||||| |||| ||| ||| || |||||||||||| ||||||| | |||||||||||| ||| ||| |    
T  13807178 catatacaaattaaatcatgggaattgaatcataaactaaatagaaa-ctttattaattgaatccaataaataagtacaggttcatcatgaaactctaat 13807276  T
Q  587 caatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||| ||| ||||||||  |||| | ||  |||||||||||||||    
T  13807277 caagagatgtttagttacacatagtaatcaacatcattacaaaa 13807320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 25731098 - 25731011
Alignment:
Q  623 ttacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagct-ctggtgtttgacccttgc 709  Q
    ||||||||||||| ||||| ||||||||||||| ||  |||||||| | |||||||||||||||||||| ||| ||||| ||||||||    
T  25731098 ttacaaaacaatataaaaacataccctagagagaacgggaggaggatgaagatcctcttcctttaagctcctgatgttttacccttgc 25731011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 677
Target Start/End: Complemental strand, 23506425 - 23506343
Alignment:
Q  595 gtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcc 677  Q
    ||||||||| ||||  | || |||||||||||||||||||||||||| || | |||||||| | |||||||||| ||||||||    
T  23506425 gtttagttgcacataactacgaacatcattacaaaacaatagaaaaacattctctagagagaataagaggaggatggagatcc 23506343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 27460476 - 27460546
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaa 784  Q
    |||| |||| ||| |||||| |||||||||||||||||||| || | |||||| |||||||||||||||||    
T  27460476 tgaaagaataaaagagtgtgtaagggtctctatttatagtggatcattacttaggggttaagagaagaaaa 27460546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 19256933 - 19257025
Alignment:
Q  75 aagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccc 168  Q
    ||||||||||| |||||||||| |||||| |||| |||||||| |||  | ||||||||||| |||||||||||||   |||||||||| ||||    
T  19256933 aagtggttgtagggttttaattgttctgctcaatacgagattatgtt-ttgtgatttagaagtgtaacgacgattatggaatccttgaaccccc 19257025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 601
Target Start/End: Original strand, 23521122 - 23521204
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagt 601  Q
    |||||||||| | |||||||| || |||   |||||||||||||||||||||||||| |||||||||| |||  |||||||||||    
T  23521122 cataaactgattgaaaaactttattaataagatccaacaaataagaagaggttcatcttggaaccctaatca--agaggtttagt 23521204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 555 - 668
Target Start/End: Original strand, 26853748 - 26853859
Alignment:
Q  555 aaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagaga 654  Q
    |||||| ||| |||||||| | ||||| || |||| ||||||||| ||| ||||| ||||| | ||||||| ||||||||| ||||| |||| |||||||    
T  26853748 aaataaaaaggggttcatcgtagaaccataatcaa-agaggtttacttgcacatg-caacatagatcattataaaacaatataaaaacatactctagaga 26853845  T
Q  655 ggacaagaggagga 668  Q
    |||||||| |||||    
T  26853846 ggacaagatgagga 26853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 772
Target Start/End: Original strand, 26853914 - 26853978
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggtt 772  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||| || | |||||| |||||    
T  26853914 gctttctgaatgaataaaatagtgttcaagggtctctatttatagtgtatcattacttaggggtt 26853978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 24903227 - 24903278
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagtt 602  Q
    |||||||||||||||| ||||||||||||||||||| |||  ||||||||||||    
T  24903227 tccaacaaataagaaggggttcatcatggaaccctaatca--agaggtttagtt 24903278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 668
Target Start/End: Original strand, 23519198 - 23519275
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    ||||||||||||   ||||| |||||||||||| ||||||||||||||||| |||  ||| |||| ||||||| ||||    
T  23519198 agaggtttagtttctcatggtaacaaacatcataacaaaacaatagaaaaacatagtctaaagagaacaagagaagga 23519275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 18396145 - 18396101
Alignment:
Q  558 taagaagaggttcatcatggaaccctagtcaatagaggtttagtt 602  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  18396145 taagaagaggttcatcacggaaccctaatcaagagaggtttagtt 18396101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 9328693 - 9328573
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    ||||||||||||||||||  |||||||| | || || || |||  | |||||||||||  ||||| || | ||||||  ||||||||||||||||| |||    
T  9328693 gaatccaacaaataagaaagggttcatcttcgagccataatca--aaaggtttagttgctcatggaaatatacatcacaacaaaacaatagaaaaacata 9328596  T
Q  646 ccctagagaggacaagaggagga 668  Q
    ||||| || | |||||| |||||    
T  9328595 ccctatagggaacaagaagagga 9328573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 14581256 - 14581153
Alignment:
Q  78 tggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccccattttgtc 177  Q
    |||||| | ||||||||||||  ||||||||||||| ||||||| | |||||| |||    ||||  |||||||  ||||||||||||||||| || |||    
T  14581256 tggttgcagggttttaattatcttgcacaatgcgaggttaggtttgattgattcagatatttaactgcgattagggaatccttgaatcccccacttcgtc 14581157  T
Q  178 tttg 181  Q
    ||||    
T  14581156 tttg 14581153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 26654508 - 26654559
Alignment:
Q  334 aaccctaaattcatacttagattcaattagaagaattttggtaagaaactaa 385  Q
    |||||||||||||||||||||||| |||| |||||||| | | |||||||||    
T  26654508 aaccctaaattcatacttagattcgattaaaagaatttagtttagaaactaa 26654559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 786
Target Start/End: Original strand, 15298472 - 15298542
Alignment:
Q  716 aatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaat 786  Q
    |||| || |||||||||| || |||||| ||||||| | ||| | |||||| |||||||||||||||||||    
T  15298472 aatggataaaatagtgtggaaaggtctcaatttataatacatcattacttaggggttaagagaagaaaaat 15298542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 776
Target Start/End: Complemental strand, 21549164 - 21549102
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaaga 776  Q
    ||||||||| ||| ||||||||||||||| |||||||| ||||| | |||||  |||||||||    
T  21549164 tgaatgaataaaagagtgtgcaagggtctttatttatattgcatgattacttttgggttaaga 21549102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 485 - 630
Target Start/End: Original strand, 25964715 - 25964861
Alignment:
Q  485 aaacatatacaaattaaatcagac-acttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccct 583  Q
    ||||||||||||||||||| || | || ||||||||||||| |||| |||  |  || ||| |||||||||||| |   | ||||||||| || ||||||    
T  25964715 aaacatatacaaattaaattaggctacatgaatcataaactaaatagaaacttgtattaatcgaatccaacaaacagttaaaggttcatcttgaaaccct 25964814  T
Q  584 agtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    | |||| ||| ||||||||  |||| | || | ||||||||||||||    
T  25964815 aatcaagagatgtttagttacacatagtaatatacatcattacaaaa 25964861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 30743499 - 30743589
Alignment:
Q  77 gtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatccc 167  Q
    ||||||| |||||||||||| | || | |||||| |||||| |||   ||||||||||||  ||||| ||||||| ||||| |||||||||    
T  30743499 gtggttgcaaggttttaattgtcctacccaatgcaagattaagttttgttgatttagaagtttaacggcgattaggaaatcattgaatccc 30743589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 31314498 - 31314417
Alignment:
Q  289 aatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattt 371  Q
    ||||||||||||||||||||| || || | |||| |  ||||||||||||||||||||  ||||||||  |||| ||||||||    
T  31314498 aatttaaccaattataattgcagcattcctttaagac-gagtcaaaaccctaaattcaagcttagatttgattaaaagaattt 31314417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 647
Target Start/End: Original strand, 9252084 - 9252182
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    |||||||||||||||||| |||||||| |  ||||| | |||  |||||||||||||  ||||| |||| |||||   | ||||||||||||||| ||||    
T  9252084 aatccaacaaataagaaggggttcatcttcaaacccaaatca--agaggtttagttgctcatggaaacagacatctcaaaaaaacaatagaaaaacatac 9252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 362
Target Start/End: Complemental strand, 23506541 - 23506465
Alignment:
Q  285 ctgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaatta 362  Q
    |||||||| | ||| ||| |||||||| ||| |||||| || |||| | |||||||||||||||||||||||| ||||    
T  23506541 ctgcaattcagccatttacaattgcggggttcccttaagat-gagttataaccctaaattcatacttagattcgatta 23506465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 785
Target Start/End: Complemental strand, 25126970 - 25126893
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaa 785  Q
    ||||| ||||||||| ||| ||||| ||||| |||||||||||| | ||| | |||||  ||||||||||||| ||||    
T  25126970 gctttttgaatgaataaaaaagtgttcaaggatctctatttataatacatcactactttggggttaagagaagtaaaa 25126893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 1e-65; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 39 - 694
Target Start/End: Complemental strand, 26419955 - 26419299
Alignment:
Q  39 cggaatttattagaagtaaata-aaacagtaaagataaa-gtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaag 136  Q
    |||||||||||||||||||||| ||| || |||||| || |||||||||  ||||||||| |||  | ||||||||||||| |||| ||  ||| ||| |    
T  26419955 cggaatttattagaagtaaatagaaatagaaaagatgaacgtggttgtagtgttttaattgttcgacccaatgcgagattatgttgtttctattcagatg 26419856  T
Q  137 cgtaacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatgacgtgtcttttgatttaagaaag 236  Q
     ||||   |||| ||  |||||||||||||| | ||||||||||| | | ||||| |    || | ||||||| ||||| | |||||||||| |||| ||    
T  26419855 tgtaatagcgatcagggaatccttgaatccctc-ttttgtctttgttggaattaacgcgaataatcattagttgatgacctatcttttgattcaagagag 26419757  T
Q  237 t-agactatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaa 335  Q
    | |||  ||||||  ||| || || ||||||||||||| ||  | |||||  ||||| ||| | ||| ||||||| | || |||||| |   ||||||||    
T  26419756 ttagatcatgaccacatgatatagaagtggaagttttatttatatatcaccacaattcaacaagttacaattgcgacattcccttaataca-agtcaaaa 26419658  T
Q  336 ccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctata 435  Q
    |||||||||||||||||||||| |||| ||||||||   | ||||| ||| ||||||||   || |    |  |||||||||||| ||||||||| ||||    
T  26419657 ccctaaattcatacttagattcgattaaaagaatttaattgagaaattaagcaatttactactgccagggtcagacggaagtagggttgtcaatcttata 26419558  T
Q  436 atccacctagagatcagtttcatcgttggtttgaaaaagtattaga-aacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaa 534  Q
    |||||||||||||| |||||| | |||| ||| |||| | |||| | |||| |||||||||||||||||| |||| | ||||| |||||||||| ||||     
T  26419557 atccacctagagatgagtttccttgttgatttcaaaatgcattacataacatacatatacaaattaaatctgacaatcgaatcgtaaactgaatgaaaa- 26419459  T
Q  535 cttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaat 634  Q
    |||  | ||||||||||||||||||||||| |||||||| ||||||| || |  | ||| ||||||||| |||||||||| |||||||||||||||||||    
T  26419458 cttttttaattgaatccaacaaataagaaggggttcatcgtggaaccgtaatacaaagatgtttagttgcacatggcaaccaacatcattacaaaacaat 26419359  T
Q  635 agaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctg 694  Q
    ||||||| ||||||||  ||  |||||||||| | | ||||||| | |||| ||||||||    
T  26419358 agaaaaacataccctaatgaaaacaagaggagaatgaagatcctttaccttgaagctctg 26419299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 478 - 709
Target Start/End: Original strand, 21828550 - 21828781
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| | |||||||||||||||||||||||    
T  21828550 tagaaacggacatatacaaattaaatcagacacttgaatcataaactgaataaaaaaatt-attaattgaatcccaaaaataagaagaggttcatcatgg 21828648  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatag--aaaaatataccctagagaggacaagaggaggagggagat 675  Q
    |||| |  |||| ||||||||||||| ||||||||||  |||||||||| |||||||||  ||||| || |||||||||| ||||||||| || ||||||    
T  21828649 aaccttgatcaa-agaggtttagttgcacatggcaactgacatcattaccaaacaatagaaaaaaaaattccctagagagaacaagaggaagatggagat 21828747  T
Q  676 cctcttcctttaagctctggtgtttgacccttgc 709  Q
    ||| | |||| |||||||  || |||||||||||    
T  21828748 cctttgccttgaagctcttatgcttgacccttgc 21828781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 481 - 681
Target Start/End: Original strand, 14280644 - 14280841
Alignment:
Q  481 aaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaac 580  Q
    ||||||| |||||| |||||||||||| | || ||| |||||||||||||||| ||| || ||| ||||||||||||||||||| |||||||| ||||||    
T  14280644 aaacaaatatatacgaattaaatcaga-atttaaattataaactgaataaaaa-ctttattaatagaatccaacaaataagaaggggttcatcgtggaac 14280741  T
Q  581 cctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
    | || |||| |||||||||||||   ||||||||  ||| ||||||||| ||||||||||| ||||||||||||| |||||||||||| | |||||||||    
T  14280742 cttaatcaa-agaggtttagttgcttatggcaaccgacaccattacaaagcaatagaaaaacataccctagagagaacaagaggaggatgtagatcctct 14280840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 517 - 680
Target Start/End: Original strand, 8401795 - 8401955
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    ||||||||||||||||  ||| || ||||||||||||||||||||||| |||||||| |||||||||| | || | || |||||||| ||||||||||      
T  8401795 cataaactgaataaaa--ctttattaattgaatccaacaaataagaaggggttcatcgtggaaccctaataaaaaaag-tttagttgcacatggcaaccg 8401891  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
    |||| |||||||||||||| ||||| ||||||||||||  |||||||||||| | |||||||||    
T  8401892 acattattacaaaacaatataaaaacataccctagagataacaagaggaggatgaagatcctct 8401955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 478 - 661
Target Start/End: Complemental strand, 11475620 - 11475439
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    ||||||||||||||||||||||||||| |||  | || ||| ||||| |||||||||||| || ||| |||| ||| |||||| ||| |||||||| |||    
T  11475620 tagaaacaaacatatacaaattaaatccgactttaga-tcaaaaactaaataaaaaactttattaatggaatacaaaaaataacaaggggttcatcgtgg 11475522  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaag 661  Q
    ||||||| | |  ||||||||||||| | ||||||||| | ||||||||||||||||| ||||| ||||| ||||||| |||||    
T  11475521 aaccctaattag-agaggtttagttgcagatggcaacatatatcattacaaaacaatataaaaacataccttagagagaacaag 11475439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 492 - 669
Target Start/End: Complemental strand, 21654125 - 21653948
Alignment:
Q  492 tacaaattaaatcag-acacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaat 590  Q
    ||||||||||||||| | | |||||| |||||||||||| |||| || |||| |||||||||||||| ||  ||||||| || || |||||||| ||||     
T  21654125 tacaaattaaatcaggaaaattgaattataaactgaatagaaaatttaataa-ttgaatccaacaaaaaaatagaggtttattatagaaccctaatcaag 21654027  T
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggag 669  Q
    ||||||||||||  ||||||  |||||||||||||||||| || ||||||| || |||||||||| |||| ||||||||    
T  21654026 agaggtttagttacacatggttacaaacatcattacaaaataagagaaaaacatgccctagagagaacaaaaggaggag 21653948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 490 - 639
Target Start/End: Original strand, 23907651 - 23907799
Alignment:
Q  490 tatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaa 589  Q
    ||||||||||||||||||||||||||||||||| | |||| ||| ||| || |||| ||||||||||||||| ||| ||||||| | |||||||| ||||    
T  23907651 tatacaaattaaatcagacacttgaatcataaattaaatacaaa-ctttattaattaaatccaacaaataagtagaagttcatcgttgaaccctaatcaa 23907749  T
Q  590 tagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaa 639  Q
     ||||||||||||  |||||| ||   |||||| ||||||||||||||||    
T  23907750 aagaggtttagttacacatggtaatcgacatcaatacaaaacaatagaaa 23907799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 521 - 708
Target Start/End: Original strand, 19218587 - 19218772
Alignment:
Q  521 aactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacat 620  Q
    |||||||||||||| || || ||| |||||||||||||||||| || |||||  | |||||||| |||| ||||||||||||| ||||| ||||| || |    
T  19218587 aactgaataaaaaaatt-attaatggaatccaacaaataagaaaagcttcatgttagaaccctaatcaa-agaggtttagttgcacatgacaacatactt 19218684  T
Q  621 cattacaaaacaatagaaaaa-tataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttg 708  Q
    ||| |||||||||||||||||  |||| |||||||| |||||||||||| |||||| |||| |||| || ||||| || ||||||||||    
T  19218685 cataacaaaacaatagaaaaaggatactctagagagaacaagaggaggatggagatactctgccttgaa-ctctgatgcttgacccttg 19218772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 544 - 712
Target Start/End: Complemental strand, 10342455 - 10342287
Alignment:
Q  544 ttgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaata 643  Q
    ||||| |||||||||||||||  ||||||| | ||||||||  ||| |||||| |||||   |||| ||||| ||||||| |||||| ||||||||||||    
T  10342455 ttgaaaccaacaaataagaaggtgttcatcttagaaccctaaccaa-agaggtgtagtttctcatgacaacatacatcataacaaaataatagaaaaata 10342357  T
Q  644 taccctagagaggacaagaggaggagggagatcctcttcctt-taagctctggtgtttgacccttgcttt 712  Q
    |||||||||||| |||||||||||| ||| ||| ||| ||||  || ||||| ||||||||||| |||||    
T  10342356 taccctagagagaacaagaggaggatggaaatcatctgccttgaaaactctgatgtttgaccctcgcttt 10342287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 531 - 670
Target Start/End: Complemental strand, 27415829 - 27415692
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| |||||||||||||||||||||||||| |||||||| | ||||| || || | || |||||||||   |||||||| | ||| ||| ||||||    
T  27415829 aaaactttataaattgaatccaacaaataagaaggggttcatcttagaacc-taatcga-agcggtttagttactcatggcaatatacaccataacaaaa 27415732  T
Q  631 caatagaaaaatataccctagagaggacaagaggaggagg 670  Q
    ||||||||||| |||||| |||||| ||||||||||||||    
T  27415731 caatagaaaaagataccccagagagaacaagaggaggagg 27415692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 547 - 685
Target Start/End: Original strand, 19542510 - 19542647
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    ||||||||||| || ||| |||||||| |||||||||| |||| |||| ||||||||  |||   |||||||||||||| |||  | |||||||||||||    
T  19542510 aatccaacaaaaaataaggggttcatcgtggaaccctaatcaa-agagatttagttgttcataaaaacaaacatcattataaactagtagaaaaatatac 19542608  T
Q  647 cctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||||||||| |||||||||||| |||||| |||| ||||    
T  19542609 cctagagagaacaagaggaggatggagatactctgcctt 19542647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 517 - 646
Target Start/End: Complemental strand, 33578487 - 33578358
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||| |||| ||||||| || ||||||||||||  |||||| ||||||||||| ||||| |||| |||| |||||||||| |  |||||| |||      
T  33578487 cataaactaaatagaaaactttattaattgaatccaatgaataagtagaggttcatcgtggaatcctaatcaagagaggtttagctacacatggtaactg 33578388  T
Q  617 acatcattacaaaacaatagaaaaatatac 646  Q
    |||||||| ||||||| |||||||| ||||    
T  33578387 acatcattgcaaaacagtagaaaaacatac 33578358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 546 - 685
Target Start/End: Original strand, 19263304 - 19263443
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa-tat 644  Q
    |||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||| ||||  ||| ||||||||| ||| |||||| ||||||  ||    
T  19263304 gaatccaacaaataagaagaggttcatcttagaaccctaatcaa-agaggtgtagttgcacattacaaaaaacatcataacagaacaatggaaaaaggat 19263402  T
Q  645 accctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    || |||||||| | |||||||||  | ||||||||| ||||    
T  19263403 actctagagagaaaaagaggagggtgaagatcctctacctt 19263443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 708
Target Start/End: Complemental strand, 26298479 - 26298313
Alignment:
Q  541 aaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaa 640  Q
    |||| |||||||||||||| |||| ||| |||| |||||||||| |||| |||  ||| |||   ||||||||| ||||||||||||||||||||||| |    
T  26298479 aaatagaatccaacaaatatgaaggggtacatcgtggaaccctaatcaa-agatattttgttat-catggcaaccaacatcattacaaaacaatagaata 26298382  T
Q  641 atataccctagagaggacaagaggaggagggagatcctcttcctttaagctc-tggtgtttgacccttg 708  Q
    | ||||   |||||  |||||||||||| | |||||||||||||| |||||| || || ||||||||||    
T  26298381 acatacttgagagacaacaagaggaggatgaagatcctcttccttgaagctcatgatgcttgacccttg 26298313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 533 - 707
Target Start/End: Original strand, 2729000 - 2729169
Alignment:
Q  533 aacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaaca 632  Q
    ||||| || ||||||||||||||||||| | |  ||||||| |  ||||||| |||| |||||||||||||  ||||||||||    |||| ||||||||    
T  2729000 aactttattaattgaatccaacaaataaaatggagttcatcttataaccctaatcaa-agaggtttagttgttcatggcaaca----tcataacaaaaca 2729094  T
Q  633 atagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgaccctt 707  Q
     |||||||||||||| ||||||| |||||| ||||| | ||| | ||| ||||| | ||||| || |||||||||    
T  2729095 gtagaaaaatataccatagagagaacaagatgaggatgaagaccatctgcctttgaactctgatgcttgaccctt 2729169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 518 - 709
Target Start/End: Complemental strand, 18474928 - 18474737
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataag-aagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    ||||||||||||||||  || || |||  ||||||||||| ||  ||| |||||||| ||||||| || |||| |||||||||||||  |||   ||||     
T  18474928 ataaactgaataaaaacatt-attaatacaatccaacaaaaaaataaggggttcatcgtggaaccataatcaa-agaggtttagttgctcataaaaacag 18474831  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagct-ctggtgtttgacccttgc 709  Q
    ||||||||||||| ||||||||||||| ||||| ||||| | |||||||||| |||||| |||| |||| || || ||| || |||||||||||    
T  18474830 acatcattacaaaccaatagaaaaataaaccctggagagaataagaggaggatggagatactctgccttgaaactcctgatgcttgacccttgc 18474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 555 - 641
Target Start/End: Original strand, 28731053 - 28731138
Alignment:
Q  555 aaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||| ||||||||  ||||||||| |||| |||||||||| |  ||||| ||||| |||||||||||||||||||||||||    
T  28731053 aaataagaaggggttcatcgcggaaccctaatcaa-agaggtttagctacacatgacaacatacatcattacaaaacaatagaaaaa 28731138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 513 - 691
Target Start/End: Original strand, 22992066 - 22992245
Alignment:
Q  513 gaatcataaactgaataaaaaa-cttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggc 611  Q
    |||||||||||| ||||||||| ||| || | ||||||  |||||||||||||| ||| |||||||||||||| | ||   ||| ||||||   |||||     
T  22992066 gaatcataaacttaataaaaaaactttattacttgaatataacaaataagaagaagtttatcatggaaccctaataaagttaggcttagttactcatggt 22992165  T
Q  612 aacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagct 691  Q
    ||| |||||| |||||||| || | ||||| |||   || |||| ||||||||||||  |||||||||| |||| |||||    
T  22992166 aactaacatctttacaaaagaaaataaaaacatattgtaaagagaacaagaggaggatagagatcctctaccttgaagct 22992245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 752
Target Start/End: Complemental strand, 11521700 - 11521658
Alignment:
Q  710 tttatgaatgaatcaaatagtgtgcaagggtctctatttatag 752  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  11521700 tttatgaatgaataaaatagtgtgcaagggtctctatttatag 11521658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 617 - 675
Target Start/End: Original strand, 22488356 - 22488414
Alignment:
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagat 675  Q
    |||||||||||||||||| |||||| ||| ||||||||| |||||||||||| ||||||    
T  22488356 acatcattacaaaacaattgaaaaacatatcctagagagaacaagaggaggatggagat 22488414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 640
Target Start/End: Original strand, 5631972 - 5632125
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaa--cttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    ||||| ||||||||||||||||  | || | |||||||||||||||||  ||| || ||  ||||||||||||||||||  |||| ||| ||||||||||    
T  5631972 acataaacaaattaaatcagactttagatt-ataaactgaataaaaaaaactttattaacggaatccaacaaataagaaagggtttatcgtggaacccta 5632070  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaa 640  Q
     |||| ||| ||||||||   ||||| ||   | ||||||||||||||||||||||    
T  5632071 atcaa-agaagtttagtttctcatggaaatcgatatcattacaaaacaatagaaaa 5632125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 670
Target Start/End: Complemental strand, 18066334 - 18066243
Alignment:
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagg 670  Q
    ||||||| |||| |||||||||||||  |||| ||| | || |||| ||||||||||||||||| |||| ||| |||| ||||||||||||||    
T  18066334 aaccctaatcaa-agaggtttagttgctcatgacaatatacgtcataacaaaacaatagaaaaagatactctatagagaacaagaggaggagg 18066243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 797
Target Start/End: Complemental strand, 11475372 - 11475289
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaatgggattttccc 797  Q
    ||||||||| ||| |||||||||| ||||||||||||| | ||| | |||||| ||||||| ||||||||| | || |||||||    
T  11475372 tgaatgaataaaagagtgtgcaagagtctctatttatattacatcattacttaggggttaaaagaagaaaactagggttttccc 11475289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 21828362 - 21828464
Alignment:
Q  269 ttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaa 368  Q
    ||||||||||| ||| | |||||| ||||| ||| ||||| |  ||| |||||| || |||||| | ||||||||||||||||||||||||| | |||||    
T  21828362 ttttagtttcatatcgccgcaattcaaccagttacaattgtgatgttcccttaagat-gagtcatagccctaaattcatacttagattcaatgaaaagaa 21828460  T
Q  369 tttt 372  Q
    ||||    
T  21828461 tttt 21828464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 552 - 650
Target Start/End: Complemental strand, 25883747 - 25883651
Alignment:
Q  552 aacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacccta 650  Q
    ||||||| |||||||||||||| ||||| | || | |  |||||||||||||  |||||||||| ||||  | ||||||||||||||||| ||||||||    
T  25883747 aacaaatgagaagaggttcatcgtggaatcataatta--agaggtttagttgctcatggcaacatacatagtaacaaaacaatagaaaaacatacccta 25883651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 647
Target Start/End: Complemental strand, 11521905 - 11521775
Alignment:
Q  514 aatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaa 613  Q
    ||||||||||||||| ||||| || || |||  | ||||||||||||||    ||||| |||||| ||||| ||||  ||||||||||||  ||||||||    
T  11521905 aatcataaactgaatgaaaaattt-attaataaattccaacaaataagatcgagttcaacatggatccctaatcaa--gaggtttagttgctcatggcaa 11521809  T
Q  614 caaacatcattacaaaacaatagaaaaatatacc 647  Q
    || ||||||| | ||||||||| ||||| |||||    
T  11521808 cagacatcataaaaaaacaatataaaaacatacc 11521775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 716 - 766
Target Start/End: Original strand, 22489679 - 22489729
Alignment:
Q  716 aatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatactta 766  Q
    ||||||| ||||||||||||| |||||||||||||||||||| | ||||||    
T  22489679 aatgaataaaatagtgtgcaatggtctctatttatagtgcatgattactta 22489729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 668
Target Start/End: Original strand, 33914006 - 33914140
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || ||| || || ||||||||||||| |||||||| || || |||| ||||  ||||||||||||  | |||||||||||||  | ||||||    
T  33914006 aaaactttattaatagattcgaacaaataagaag-ggttcatcttgaaagcctaatcaa--gaggtttagttgctcgtggcaacaaacattgtaacaaaa 33914102  T
Q  631 caatagaaaaatataccctagagaggacaagaggagga 668  Q
    || || ||||| |||||||| | || ||||||||||||    
T  33914103 cattataaaaacataccctaaaaagaacaagaggagga 33914140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 668
Target Start/End: Complemental strand, 21018253 - 21018176
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    |||||||||| ||  ||||| |||||||||||| ||| ||||||||||||| ||| || ||| || ||||||||||||    
T  21018253 agaggtttagctgttcatggaaacaaacatcataacataacaatagaaaaacatatcccagacagaacaagaggagga 21018176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 11476037 - 11475955
Alignment:
Q  40 ggaatttattagaa-gtaaataaaacagtaaagat--aaagtggttgtaaggttttaattattctgcacaatgcgagattaggtt 121  Q
    |||||||||||||| ||||||||||||  ||||||  ||||||||||||||||||||||  | |||| |||||| | ||||||||    
T  11476037 ggaatttattagaaagtaaataaaaca--aaagattaaaagtggttgtaaggttttaatagtcctgcccaatgcaatattaggtt 11475955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 728 - 790
Target Start/End: Original strand, 22992297 - 22992359
Alignment:
Q  728 agtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaatggga 790  Q
    |||||| ||| ||||||||||||||||||| | ||| || ||||| ||||||||||| |||||    
T  22992297 agtgtggaagagtctctatttatagtgcatcattacgtaggggtttagagaagaaaattggga 22992359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 550 - 584
Target Start/End: Complemental strand, 27226910 - 27226876
Alignment:
Q  550 ccaacaaataagaagaggttcatcatggaacccta 584  Q
    ||||||||||||||| |||||||||||||||||||    
T  27226910 ccaacaaataagaaggggttcatcatggaacccta 27226876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 6e-55; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 422 - 667
Target Start/End: Original strand, 16174645 - 16174890
Alignment:
Q  422 ttgtcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacacttgaatcataa 521  Q
    ||||||||| ||||||| ||||||||||||   |  ||||||||||||||||| ||| |||  | ||||||| |||||||||| ||||||||||||||||    
T  16174645 ttgtcaatcttataatctacctagagatcataatagtcgttggtttgaaaaagcatttgaactagacatatagaaattaaatccgacacttgaatcataa 16174744  T
Q  522 actgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatc 621  Q
    |||||||||||||||| || |||||||||||| |||||||||  || ||||  ||||| |||| |||| |||| |||||||| |||||| |||| |||||    
T  16174745 actgaataaaaaactttattaattgaatccaagaaataagaaaggggtcatattggaatcctaatcaagagagatttagttgcacatggtaacatacatc 16174844  T
Q  622 attacaaaacaatagaaaaatataccctagagaggacaagaggagg 667  Q
    |||| |||| |||||||||||||||| ||||||| |||||| ||||    
T  16174845 attataaaataatagaaaaatataccgtagagagaacaagaagagg 16174890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 501 - 661
Target Start/End: Complemental strand, 30756382 - 30756219
Alignment:
Q  501 aatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttag 600  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| || ||||| ||| |||||||||| |||| | ||||||||    
T  30756382 aatcagacacttgaatcataaactgaataaaaaactttattaattgaatacaacaaataaaaataggtttatcttggaaccctaatcaagaaaggtttag 30756283  T
Q  601 ttggacatggcaacaaacatcattacaaaacaat---agaaaaatataccctagagaggacaag 661  Q
    ||| ||||| ||||| ||||||||||||||||||   ||||||| |||| |||||||| |||||    
T  30756282 ttgcacatgacaacatacatcattacaaaacaatacaagaaaaacatacactagagagaacaag 30756219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 481 - 709
Target Start/End: Original strand, 26499208 - 26499434
Alignment:
Q  481 aaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaac 580  Q
    |||||||||||||||||||||| ||||||||||||||||||| || ||||||| ||| || |||| |||||  ||||||||||| | |||| | || |||    
T  26499208 aaacaaacatatacaaattaaaccagacacttgaatcataaattgtataaaaa-ctttattaattcaatcccgcaaataagaagggtttcaccgtgaaac 26499306  T
Q  581 cctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
    | || |||| |||| |||||||| ||||| |||||||||| |||||||| ||||| ||||| ||||| ||||||| |||||||||||| ||||||| | |    
T  26499307 cttaatcaa-agagatttagttgcacatgacaacaaacataattacaaagcaatataaaaacataccttagagagaacaagaggaggatggagatcattt 26499405  T
Q  681 tcctttaagctctggtgtttgacccttgc 709  Q
    ||||| ||| |||| || || ||||||||    
T  26499406 tccttgaagatctgatgcttaacccttgc 26499434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 487 - 680
Target Start/End: Original strand, 32929826 - 32930021
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaa--cttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||| |  |||| ||||||| ||||||||||| ||||||| | ||||| ||    
T  32929826 acatatacaaattaaatcagacacttgaatcataaactaaataaaaaaacctttagtaattaaatccaagaaataagaagaagttcatctttgaacctta 32929925  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
     | || ||||||||||||| ||||| ||||||||||| |||||||||||||||||||   ||| ||||||| | |||||||| ||| | |||||||    
T  32929926 attaaaagaggtttagttgtacatgacaacaaacatcgttacaaaacaatagaaaaaccaaccttagagagaataagaggagaaggaaaatcctct 32930021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 672
Target Start/End: Complemental strand, 16440544 - 16439919
Alignment:
Q  39 cggaatttattagaagtaaataaaacagtaaagataaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcg 138  Q
    |||||||||||| |||||||||||| |  | ||||||| |||||| ||| ||||| || |  ||  ||||| |||||||||| ||||||||| |||   |    
T  16440544 cggaatttattataagtaaataaaataaaagagataaactggttgcaagttttta-ttgtcttgtccaatgtgagattaggtaggtttgattcagatttg 16440446  T
Q  139 taacgacgattagaaaatccttgaatcccccatttt--gtctttgctcggattaaagatgttagttattagtttatgacgtgtcttttgatttaagaaag 236  Q
    ||||||| |||||   |||||||||||||   ||||  ||||||| | | ||||| |  |||  ||||||||||||||| |||||||  ||||| ||| |    
T  16440445 taacgacaattagggtatccttgaatccc---ttttccgtctttgttggaattaacgtggttgattattagtttatgacatgtctttc-atttacgaatg 16440350  T
Q  237 tagactatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaac 336  Q
    |||  ||||||| | || || | |||||||||||||| ||| | |||  ||||||||||||| ||||||||  || ||| |||  | || ||| ||||||    
T  16440349 taggatatgaccttttgatataacagtggaagttttaattttatatcgttgcaatttaaccagttataattatggtgttccctacagat-gagacaaaac 16440251  T
Q  337 cctaa-attcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctata 435  Q
    | ||| | | ||||||||| ||||||| ||||| ||   ||||||| ||| ||||||||   |||||| || | ||||| ||||  ||||  ||| | ||    
T  16440250 cttaacaatgatacttagaatcaattaaaagaaattaattaagaaaataagcaatttactattgtcttgttcgaacggaggtagagttgtagatcattta 16440151  T
Q  436 atccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaac 535  Q
     ||||||| ||||||||||| | | ||    |||||| | |||||||||   | |||||||||||| ||| |  ||||||||||||||||||   |||||    
T  16440150 ctccacct-gagatcagtttgaacctttagctgaaaa-gcattagaaaccgtcgtatacaaattaagtcacatgcttgaatcataaactgaa---aaaac 16440056  T
Q  536 ttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaata 635  Q
    || || |||||||||||||||||||||||||||||||| || || |||| || ||||||||||| ||  |||||||||||||||| ||||||||| ||||    
T  16440055 tttattaattgaatccaacaaataagaagaggttcatcttgaaatcctattcgatagaggtttaatttcacatggcaacaaacattattacaaaataata 16439956  T
Q  636 gaaaaatataccctagagaggacaagaggaggaggga 672  Q
     ||||| ||| ||| ||||| ||| ||| | ||||||    
T  16439955 taaaaacatatcctggagagaacatgagaatgaggga 16439919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 486 - 670
Target Start/End: Original strand, 10976424 - 10976608
Alignment:
Q  486 aacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| ||||||||   |||| |||||  ||||||||||     
T  10976424 aacatatacaaattaaatcagacacttgaatcataaactggataaaaaactttattaattgaatctaacaaatagagagagattcattgtggaaccctaa 10976523  T
Q  586 tcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagg 670  Q
    |||| ||| ||||| |||  |||| ||||   |||||||  ||||||| ||||||||| ||| ||||||| ||||||||||||||    
T  10976524 tcaagagatgtttaattgttcatgacaaccggcatcattgaaaaacaacagaaaaataaaccttagagagaacaagaggaggagg 10976608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 489 - 670
Target Start/End: Original strand, 9395954 - 9396136
Alignment:
Q  489 atatacaaattaaatcagacacttgaatcataaactgaataaaaaa-cttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtc 587  Q
    |||||||||||||||||||   |||||||||||| ||||||||||| ||| || ||| ||||||||||| |||||||| ||||||| ||||||| || ||    
T  9395954 atatacaaattaaatcagatgtttgaatcataaattgaataaaaaaactttattaatcgaatccaacaattaagaagatgttcatcttggaaccataatc 9396053  T
Q  588 aatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagg 670  Q
    || ||||||||||||  ||||||||||  ||||||||| |||||||| |||||| ||| |||  |||| ||||||||||||||    
T  9396054 aagagaggtttagtttcacatggcaaccgacatcattataaaacaattgaaaaacatatcctgaagagaacaagaggaggagg 9396136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 478 - 589
Target Start/End: Complemental strand, 1130336 - 1130226
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||||||||||||||||||||||||||  | || |||||||||||||||||||||| ||  |||||||||||||| ||||||  |||||| |||||    
T  1130336 tagaaacaaacatatacaaattaaatcagactttaga-tcataaactgaataaaaaactttattgattgaatccaacaactaagaaagggttcaccatgg 1130238  T
Q  578 aaccctagtcaa 589  Q
    ||||||||||||    
T  1130237 aaccctagtcaa 1130226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 531 - 668
Target Start/End: Original strand, 17859883 - 17860019
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || |||||||||||||||||||||||  ||||||| |||||| ||| |||| |||| |||||||| ||||||||||||| || |||||||||    
T  17859883 aaaactttattaattgaatccaacaaataagaaggtgttcatcttggaactctaatcaa-agagttttagttgcacatggcaacaaatatgattacaaaa 17859981  T
Q  631 caatagaaaaatataccctagagaggacaagaggagga 668  Q
    ||||||||||| ||||| || |||| || |||| ||||    
T  17859982 caatagaaaaacataccatatagagaaccagagaagga 17860019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 542 - 714
Target Start/End: Original strand, 13830316 - 13830491
Alignment:
Q  542 aattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||||||||||||| ||||||| ||  | |||| ||| | || ||| ||||||||  |||||| |||| |||||||||||||| |||| |||||    
T  13830316 aattgaatccaacaaataagtagaggtttatagtagaacgctaatgaagagatgtttagttacacatggtaacatacatcattacaaaataataaaaaaa 13830415  T
Q  642 ---tataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgctttat 714  Q
        ||||||||||||| |||||||||||| |||||||| |||||||  | ||||  |||||||||||||| ||||    
T  13830416 aatcataccctagagagaacaagaggaggatggagatccccttccttggaactctaatgtttgacccttgccttat 13830491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 517 - 651
Target Start/End: Complemental strand, 15370193 - 15370060
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||| ||| |||||||| || |||| |||||||||||||||||| |||| ||||||||||| || |||| | | ||||| ||||| |||| |||      
T  15370193 cataaactaaatgaaaaactttattaattaaatccaacaaataagaaggggttaatcatggaaccataatcaa-acaagtttaattggatatggaaaccg 15370095  T
Q  617 acatcattacaaaacaatagaaaaatataccctag 651  Q
    |||||||||||||||||| ||||| ||||||||||    
T  15370094 acatcattacaaaacaattgaaaagtataccctag 15370060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 517 - 650
Target Start/End: Complemental strand, 15319553 - 15319421
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||| | ||| |||||||| || |||| |||||||||| ||||||| |||| |||||||||||||| |||| | | ||||| |||||||||| |||      
T  15319553 cataaattaaatgaaaaactttattaattaaatccaacaagtaagaaggggttaatcatggaaccctaatcaa-acaagtttaattggacatggaaaccg 15319455  T
Q  617 acatcattacaaaacaatagaaaaatatacccta 650  Q
    |||||||||||||||||| ||||| |||||||||    
T  15319454 acatcattacaaaacaattgaaaagtatacccta 15319421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 511 - 652
Target Start/End: Complemental strand, 15386636 - 15386496
Alignment:
Q  511 ttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatgg 610  Q
    ||||| |||||||| |||  ||||||| || |||| ||||||||||||||||||||||| |||||||||||| | || | | | |||||||| ||||| |    
T  15386636 ttgaaacataaactaaatggaaaactttattaattaaatccaacaaataagaagaggttaatcatggaacccgaatcta-acaagtttagttcgacatag 15386538  T
Q  611 caacaaacatcattacaaaacaatagaaaaatataccctaga 652  Q
     |||  |||||||| ||||||||| ||||| |||||||||||    
T  15386537 aaaccgacatcattgcaaaacaattgaaaagtataccctaga 15386496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 648
Target Start/End: Original strand, 9725606 - 9725703
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    |||||||||||||||| |||||||| |||||||||| ||||  |||||||| |||  |||| ||||| ||||||| ||||||||||||||||| ||||||    
T  9725606 tccaacaaataagaaggggttcatcgtggaaccctaatcaa--gaggtttaattgctcatgacaacagacatcataacaaaacaatagaaaaacataccc 9725703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 530 - 680
Target Start/End: Original strand, 13723268 - 13723415
Alignment:
Q  530 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 629  Q
    ||||||||||| ||| |||||||| ||||||||   | |||||| | |||||| | |||| |  | |||||||| ||||| ||||||||||||| |||||    
T  13723268 aaaaacttcattaatagaatccaaaaaataagattggattcatcgtagaacccaaatcaa-attgatttagttgcacatgacaacaaacatcataacaaa 13723366  T
Q  630 acaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
    ||||||||||||||||||||| |||  ||| | |||||| |||||||||||    
T  13723367 acaatagaaaaatataccctacaga--acagggggaggatggagatcctct 13723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 487 - 578
Target Start/End: Complemental strand, 13123676 - 13123584
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaat---aaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgga 578  Q
    |||| ||||||||||| |||||||||||||||||||||||||   ||||||||  || |||||||||||| ||||||  ||||||||||||||||    
T  13123676 acatgtacaaattaaagcagacacttgaatcataaactgaatataaaaaaact--attaattgaatccaataaataactagaggttcatcatgga 13123584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 523 - 692
Target Start/End: Complemental strand, 15376156 - 15375988
Alignment:
Q  523 ctgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatca 622  Q
    |||||| |||||| | || |||| |||||| |||| |||||| ||||||   || |||| || |||| |||||||||||| | ||||| ||| |||||||    
T  15376156 ctgaatgaaaaacattattaattaaatccatcaaagaagaaggggttcagtgtgaaaccataatcaa-agaggtttagtttggcatggaaaccaacatca 15376058  T
Q  623 ttacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctc 692  Q
    || ||||||||| |||||| ||||||||||||| |||||  |||||  |||||| ||| |||| ||||||    
T  15376057 tttcaaaacaattgaaaaacataccctagagagaacaagttgaggattgagatcgtctgccttgaagctc 15375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 517 - 653
Target Start/End: Complemental strand, 15376452 - 15376317
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||| |||||||||  | || |||| |||| ||||||||||||| |||| ||| || ||||||| |||  | | |||||||| || |||| ||| |    
T  15376452 cataaactaaataaaaaaaattattaattaaatctaacaaataagaagtggttaatcttgaaaccctaatcag-acaagtttagttcgatatggaaacca 15376354  T
Q  617 acatcattacaaaacaatagaaaaatataccctagag 653  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  15376353 acatcattacaaaacaattgaaaagtataccctagag 15376317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 517 - 709
Target Start/End: Complemental strand, 22263104 - 22262914
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||||||  | |||||| ||  ||||||| |||||||||||||  |||||||  |||||||||| |||| ||| ||| | ||  |||||| |||      
T  22263104 cataaactgaacgagaaactttattcattgaattcaacaaataagaaagggttcatattggaaccctaatcaa-agacgtt-atttacacatggtaacgt 22263007  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgc 709  Q
    ||||||||||||||||||||||||| ||||  ||||||  | |||| ||||| || |||||||| |||| ||||| || || |||||||||||    
T  22263006 acatcattacaaaacaatagaaaaacatacattagagaaaataagaagaggatggcgatcctctaccttgaagctatgatgcttgacccttgc 22262914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 660
Target Start/End: Complemental strand, 15575629 - 15575529
Alignment:
Q  558 taagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagagga 657  Q
    ||||||| |||||||| |||||||||| ||||  |||| |||||||  |||||||||||||||||| | |||||||||||| || |||||| |||||| |    
T  15575629 taagaaggggttcatcgtggaaccctaatcaa--gaggcttagttgctcatggcaacaaacatcataagaaaacaatagaataacatacccaagagagaa 15575532  T
Q  658 caa 660  Q
    |||    
T  15575531 caa 15575529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 599 - 685
Target Start/End: Complemental strand, 16528296 - 16528210
Alignment:
Q  599 agttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||||| ||||| ||| | ||||||| ||||||||||| ||||| ||||||||||||| |||||||||||| | ||||||||| ||||    
T  16528296 agttgcacatgacaatagacatcataacaaaacaatacaaaaacataccctagagagaacaagaggaggatgaagatcctctgcctt 16528210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 709 - 794
Target Start/End: Original strand, 12971945 - 12972030
Alignment:
Q  709 ctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaatgggatttt 794  Q
    |||||| ||||||| ||| ||| |||||||||||||||||||||||||| | ||| || |||||||| |||||||| |||| ||||    
T  12971945 ctttattaatgaataaaagagtctgcaagggtctctatttatagtgcatcattacgtaggggttaagggaagaaaactgggctttt 12972030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 693
Target Start/End: Complemental strand, 15349414 - 15349267
Alignment:
Q  542 aattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||| |||| |||||||||||||||||||||  || ||||||| || | |||||||||||||| || || |||   ||||  ||||||||||| ||||||    
T  15349414 aattaaatcaaacaaataagaagaggttcattgtgaaaccctaatcga-agaggtttagttgggcacggaaac---catcgctacaaaacaattgaaaaa 15349319  T
Q  642 tataccctagagaggacaagaggaggagggagatcctcttcctttaagctct 693  Q
     ||||||||||||| |||| ||| |||   ||||| |||||||| |||||||    
T  15349318 cataccctagagagaacaaaaggcggataaagatcatcttccttaaagctct 15349267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 685
Target Start/End: Original strand, 1558228 - 1558392
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    |||||||||||||||| ||| || |||  |||| || |||||||||| ||||||| | |||||| || |||| ||| | ||| |||  ||||| |||  |    
T  1558228 ataaactgaataaaaa-ctttattaatcaaatctaaaaaataagaag-ggttcatgaaggaaccttaatcaa-agaagattatttgttcatggaaaccga 1558324  T
Q  618 catcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||||||||||||| |||||||||||||| ||||||||  ||||||||| || | ||||||||| ||||    
T  1558325 catcattacaaaataatagaaaaatatatcctagagataacaagaggatgatgaagatcctctgcctt 1558392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 682
Target Start/End: Original strand, 12971774 - 12971909
Alignment:
Q  543 attgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaataga--aaa 640  Q
    |||||||||||||||||||||| | || |||||||||||| | |||||      ||||||| |||||| ||||  ||||||||||| ||||||||  | |    
T  12971774 attgaatccaacaaataagaagggatttatcatggaacccgaatcaat------ttagttgcacatgggaacatgcatcattacaatacaatagaatata 12971867  T
Q  641 atataccctagagaggacaagaggaggagggagatcctcttc 682  Q
    | ||||| ||||||| |||||||||||| | ||||| |||||    
T  12971868 acataccatagagagaacaagaggaggatgaagatcgtcttc 12971909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 19670017 - 19670157
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || ||| |||||||||||| || ||| |||||||| | ||| ||||  ||| |||||||||||||  |||| ||||||| ||||| ||||||    
T  19670017 aaaactttattaatcgaatccaacaaaaaataag-ggttcatcttagaatcctaaacaa-agaggtttagttgctcatgacaacaaaaatcataacaaaa 19670114  T
Q  631 caatagaaaaatataccctagagaggacaagaggaggagggag 673  Q
     |||| ||||| ||||||||||||| ||| | |||||| ||||    
T  19670115 taatataaaaacataccctagagagaacagggggaggatggag 19670157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 668
Target Start/End: Original strand, 30235775 - 30235907
Alignment:
Q  532 aaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaac 631  Q
    |||||| || ||| |||| |||||||||||||   ||||||| | |||||||  |||| || ||||||||||  || | ||||| |||||||   |||||    
T  30235775 aaactttattaatagaattcaacaaataagaatgagttcatcttagaaccctgatcaa-agtggtttagttgctcaagacaacatacatcat---aaaac 30235870  T
Q  632 aatagaaaaatataccctagagaggacaagaggagga 668  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  30235871 aatagaaaaacataccctagagagaacaagaggagga 30235907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 786
Target Start/End: Original strand, 17198401 - 17198477
Alignment:
Q  710 tttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaat 786  Q
    ||||| ||||||| ||| ||| |||||||||||||||||| | | ||| | |||||| |||||||||||||||||||    
T  17198401 tttataaatgaataaaagagtatgcaagggtctctatttagaatacatcattacttaggggttaagagaagaaaaat 17198477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 604
Target Start/End: Original strand, 22558817 - 22558910
Alignment:
Q  511 ttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttgg 604  Q
    |||||||||||| | |||||||||  |  | |||||||||||||||||||||||||| ||||| | |||  ||| |||| ||| ||||||||||    
T  22558817 ttgaatcataaattaaataaaaaaaattgttaattgaatccaacaaataagaagaggatcatcttagaaatctaatcaagagacgtttagttgg 22558910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 17859081 - 17859163
Alignment:
Q  85 aaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatccc 167  Q
    |||| |||||||  ||||| |||||| |||||||||| || ||||| ||| | ||||||| ||||||  ||||||||||||||    
T  17859081 aagggtttaattgctctgcccaatgcaagattaggtttgtgtgattcagatgtgtaacgatgattagggaatccttgaatccc 17859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 693
Target Start/End: Complemental strand, 15318687 - 15318618
Alignment:
Q  624 tacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctct 693  Q
    ||||||||||| |||||| ||||||||||||| |||| ||| |||   ||||| |||||||| |||||||    
T  15318687 tacaaaacaattgaaaaacataccctagagagaacaaaaggtggataaagatcatcttccttaaagctct 15318618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 9e-54; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 487 - 709
Target Start/End: Original strand, 17883924 - 17884144
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagt 586  Q
    ||||||||||||||||||| |||||||| ||||||||||||  ||| |||| || | |||||||  |||||| |||||||||||||  |||||||||| |    
T  17883924 acatatacaaattaaatcaaacacttgattcataaactgaa--aaacactttattagttgaatctgacaaatgagaagaggttcatattggaaccctaat 17884021  T
Q  587 caatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttccttt 686  Q
    ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| ||  || ||||||| ||||     
T  17884022 caagagaggtttagttgcacatggcaaccaacatcattacaaaacaatagaaaaacataccctagaaaggacaagaggatgacagaaatcctctgccttg 17884121  T
Q  687 aagctctggtgtttgacccttgc 709  Q
    || ||||| || |||||||||||    
T  17884122 aatctctgatgcttgacccttgc 17884144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 258 - 537
Target Start/End: Complemental strand, 31274773 - 31274495
Alignment:
Q  258 agcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattc 357  Q
    ||||||| |||||||| ||| | ||| |  ||||||||||| | |||||||||||| |||||||| || |||| |||||| |||||| |||||||| |||    
T  31274773 agcagtgaaagttttaattttatatcgccacaatttaaccagtcataattgcggcgattccttaagat-gagtaaaaaccttaaatttatacttagcttc 31274675  T
Q  358 aattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctataatccacctagagatcagtttca 457  Q
     |||| ||||||||   | | ||||| | ||||||||   |||||  || | ||| ||||||| |||||||||||||||| |||||||| ||  ||||||    
T  31274674 gattaaaagaatttaatttataaacttagcaatttactactgtctagttcgcacgaaagtagggttgtcaatcctataatgcacctagatatatgtttca 31274575  T
Q  458 tcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaactt 537  Q
    | ||||||||||||||| || ||||||| | ||||||||||||||| ||| | | |||||||| | ||||||||||||||    
T  31274574 ttgttggtttgaaaaagcatgagaaacagatatatacaaattaaatgagataatcgaatcatagattgaataaaaaactt 31274495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 521 - 685
Target Start/End: Complemental strand, 9504635 - 9504472
Alignment:
Q  521 aactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacat 620  Q
    ||||||||||||| |||  | ||| ||||||||||||||||||| | |||||| | ||||| || |||| ||||||||||||| ||||||||||||||||    
T  9504635 aactgaataaaaa-ctttgttaatggaatccaacaaataagaagggattcatcttagaaccataatcaa-agaggtttagttgtacatggcaacaaacat 9504538  T
Q  621 cattacaaaacaatag-aaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||| |||||||||| | ||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  9504537 cataacaaaacaatggaaaaaacataccctagagagaacaagaggaggatggagatcctcttcctt 9504472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 521 - 685
Target Start/End: Complemental strand, 9516001 - 9515838
Alignment:
Q  521 aactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacat 620  Q
    ||||||||||||| |||  | ||| ||||||||||||||||||| | |||||| | ||||| || |||| ||||||||||||| ||||||||||||||||    
T  9516001 aactgaataaaaa-ctttgttaatggaatccaacaaataagaagggattcatcttagaaccataatcaa-agaggtttagttgtacatggcaacaaacat 9515904  T
Q  621 cattacaaaacaatag-aaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||| |||||||||| | ||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  9515903 cataacaaaacaatggaaaaaacataccctagagagaacaagaggaggatggagatcctcttcctt 9515838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 495 - 705
Target Start/End: Original strand, 21844191 - 21844398
Alignment:
Q  495 aaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagag 594  Q
    |||||||||| |||| |  || |||| ||||||| |||||||| || ||||||||||||||||||||||   ||||||| |||||||||| |||| ||||    
T  21844191 aaattaaatctgacaatcaaaacatagactgaatgaaaaactttattaattgaatccaacaaataagaatgagttcatcttggaaccctaatcaa-agag 21844289  T
Q  595 gtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctg 694  Q
    ||||||||| ||||||||||| ||||||||||||||||  ||||||| | |||||| |||| || ||||||| | | | ||||||| |||| ||||||||    
T  21844290 gtttagttgtacatggcaacatacatcattacaaaaca--agaaaaacaaaccctaaagagaacgagaggagcatgtaaatcctctgccttgaagctctg 21844387  T
Q  695 gtgtttgaccc 705  Q
     || |||||||    
T  21844388 atgcttgaccc 21844398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 470 - 666
Target Start/End: Original strand, 21842535 - 21842732
Alignment:
Q  470 aaaagtattaga-aacaaacatatacaaa-ttaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagagg 567  Q
    |||||||||| | |||| |||| |||||| ||||||| |||| |  || |||| ||||||| |||||||| || ||||||||||||||||||||||   |    
T  21842535 aaaagtattatagaacagacatgtacaaacttaaatctgacaatcaaaacatagactgaatgaaaaactttattaattgaatccaacaaataagaatgag 21842634  T
Q  568 ttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggag 666  Q
    |||||| |||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||| ||||  |||||||| |||| || |||||||    
T  21842635 ttcatcttggaaccctaatcaa-agaggtttagttgtacatggcaacatacatcattacaaaacaatataaaagcataccctaaagagaacgagaggag 21842732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 478 - 640
Target Start/End: Original strand, 21847810 - 21847975
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaa---cttcataaattgaatccaacaaataagaagaggttcatca 574  Q
    ||||||| ||||||||||||||||||| ||| ||| |||||||| ||||||||||||   ||| || |||| || |||| |||||| ||| ||||||||     
T  21847810 tagaaacgaacatatacaaattaaatccgacgcttaaatcataacctgaataaaaaaaaactttattaattaaacccaaaaaataataagtggttcatct 21847909  T
Q  575 tggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaa 640  Q
    |||||||||| |||| ||||||||||||| | | |||||| |||||||| ||||||||||||||||    
T  21847910 tggaaccctaatcaaaagaggtttagttgcataaggcaaccaacatcatcacaaaacaatagaaaa 21847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 524 - 685
Target Start/End: Original strand, 18235707 - 18235867
Alignment:
Q  524 tgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcat 623  Q
    |||||||||||  | || ||||||||||||||||||||||||| |||||| | ||| | || || ||||||||||||||  ||||||| ||| ||||||     
T  18235707 tgaataaaaaaaattattaattgaatccaacaaataagaagagtttcatcttagaatcgtaatcgatagaggtttagtttcacatggctacatacatca- 18235805  T
Q  624 tacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    |||||||||||||||||| ||||| ||||||| | |||| ||||| ||||||||||||||||    
T  18235806 tacaaaacaatagaaaaacataccatagagagaataagaagaggatggagatcctcttcctt 18235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 487 - 641
Target Start/End: Complemental strand, 24048094 - 24047938
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagt 586  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||  | ||  ||||||||||||||||||||| | ||||||| ||||||| || |    
T  24048094 acatatacaaattaaatcaaacacttgaatcataaactaaattaaaaaaattattgattgaatccaacaaataagaataagttcatcttggaaccataat 24047995  T
Q  587 caatagagg--tttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    ||| |||||  |||||||| ||||| ||||  ||||||||||||| ||||| |||||    
T  24047994 caagagaggtttttagttgcacatgacaaccgacatcattacaaagcaataaaaaaa 24047938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 532 - 685
Target Start/End: Original strand, 27416665 - 27416816
Alignment:
Q  532 aaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaac 631  Q
    |||||| |||||||||||||||||||||| ||| |||||||  |||||||||| ||||  ||||||||||   ||| |||||||||||| ||  ||||||    
T  27416665 aaactttataaattgaatccaacaaataataaggggttcatattggaaccctaatcaa--gaggtttagtgtcacacggcaacaaacattataccaaaac 27416762  T
Q  632 aatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    |||||||||  |||||  |||||| |||||||||||| ||||||||||| ||||    
T  27416763 aatagaaaagcatacctcagagagaacaagaggaggatggagatcctctgcctt 27416816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 478 - 709
Target Start/End: Complemental strand, 18819441 - 18819214
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||||||||||||||||||||| ||||  | |||  || | || |||||||||||| || ||||   |||||||||||||||| |  ||||| |||    
T  18819441 tagaaacaaacatatacaaattaaattagactttagaag-attacctaaataaaaaactttattaattatttccaacaaataagaaggg--tcatcgtgg 18819345  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcc 677  Q
    ||||||| |||| |||||| ||||||  |||| ||||   |||||||||||||||||||||||| |||||||||  || ||||||||||||  |||||||    
T  18819344 aaccctaatcaa-agaggtctagttgctcatgacaaccgtcatcattacaaaacaatagaaaaacataccctagtaagaacaagaggaggatagagatcc 18819246  T
Q  678 tcttcctttaagctctggtgtttgacccttgc 709  Q
    |||  ||  ||||| || ||||||||| ||||    
T  18819245 tctgtctggaagctttgatgtttgaccattgc 18819214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 551 - 669
Target Start/End: Complemental strand, 25474695 - 25474579
Alignment:
Q  551 caacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacccta 650  Q
    |||||||||||||| |||||||| ||||||| || ||||  ||||||||||||  |||||||||| ||||||| ||||||||||||||||| ||||||||    
T  25474695 caacaaataagaaggggttcatcgtggaaccataatcaa--gaggtttagttgctcatggcaacagacatcataacaaaacaatagaaaaagatacccta 25474598  T
Q  651 gagaggacaagaggaggag 669  Q
    || || | |||||||||||    
T  25474597 gaaagaataagaggaggag 25474579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 481 - 660
Target Start/End: Original strand, 14921444 - 14921619
Alignment:
Q  481 aaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaac 580  Q
    ||||| ||||| || |||||||||||||  || ||| ||| ||| |||||||| ||| || ||| |||||||||||||||||| |||||||||  |||||    
T  14921444 aaacagacataaacgaattaaatcagact-ttaaattatagactaaataaaaa-ctttattaatagaatccaacaaataagaa-aggttcatcgaggaac 14921540  T
Q  581 cctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaa 660  Q
    |||| || | |||||||| ||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||| ||||    
T  14921541 cctaatcga-agaggttttgttgctcatggcaaccgacatcattacaaaacaattgaaaaacataccctagagagaacaa 14921619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 617 - 757
Target Start/End: Complemental strand, 31274460 - 31274322
Alignment:
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgctttatga 716  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |  || |||| ||| |||| ||||| || |  ||| |||||  ||  |||    
T  31274460 acatcattacaaaacaatagaaaaatatactctagagagaacaagaggaagttggcgatcatctgccttgaagctatgattcttgtccctt--ttcttga 31274363  T
Q  717 atgaatcaaatagtgtgcaagggtctctatttatagtgcat 757  Q
    |||||| ||| || |||||||||||||||||||||||||||    
T  31274362 atgaataaaagagagtgcaagggtctctatttatagtgcat 31274322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 488 - 666
Target Start/End: Complemental strand, 29769860 - 29769682
Alignment:
Q  488 catatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtc 587  Q
    ||||||||||||||||| | || | ||||||||||||| ||| |||| || || |||| ||||||||||||||| |||||||||   || ||||||| ||    
T  29769860 catatacaaattaaatcgggcaatagaatcataaactggatagaaaattttattaattaaatccaacaaataagtagaggttcactgtgaaaccctaatc 29769761  T
Q  588 aatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggag 666  Q
    || | ||||||| ||  |||| | ||  |||||||| ||||||||||||||| | ||| ||| ||||| ||| ||||||    
T  29769760 aagaaaggtttaattacacattgtaattaacatcataacaaaacaatagaaatacataacctcgagagaacatgaggag 29769682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 551 - 670
Target Start/End: Original strand, 18532962 - 18533079
Alignment:
Q  551 caacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacccta 650  Q
    |||||||||||||| |||| ||| |||||||||| | ||  ||||||||||||  |||||||| | ||||||| ||||||||| ||||||||||||||||    
T  18532962 caacaaataagaaggggtttatcgtggaaccctaataaa--gaggtttagttgctcatggcaatagacatcataacaaaacaaaagaaaaatatacccta 18533059  T
Q  651 gagaggacaagaggaggagg 670  Q
    || || | || |||||||||    
T  18533060 gacagaataaaaggaggagg 18533079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 693
Target Start/End: Original strand, 20518662 - 20518823
Alignment:
Q  530 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 629  Q
    |||||||| || |||||| ||||| |||||||||| |||||||| | |||||||| ||||  ||||||||||||  |||||  || ||||||||||||||    
T  20518662 aaaaactttattaattgattccaa-aaataagaaggggttcatcgtagaaccctaatcaag-gaggtttagttgctcatggacaccaacatcattacaaa 20518759  T
Q  630 acaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctct 693  Q
    | |||||||||  ||||| ||||||  | || |||| || ||||||| | |||||| |||||||    
T  20518760 ataatagaaaagcataccttagagaaaataaaaggatgatggagatcatattccttgaagctct 20518823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 546 - 693
Target Start/End: Complemental strand, 24188705 - 24188559
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    |||||||||||||||||||  ||||||||||||||| || |||| | |||||||||||  |||||||||  || ||||  ||||| |||||||||| | |    
T  24188705 gaatccaacaaataagaaggagttcatcatggaaccttaatcaa-acaggtttagttgctcatggcaaccgacgtcatctcaaaataatagaaaaacaca 24188607  T
Q  646 ccctagagaggacaagaggaggagggagatcctcttcctttaagctct 693  Q
    |||||||||| | | ||| | || | |||||||||||| | |||||||    
T  24188606 ccctagagagaatatgagtaagatgaagatcctcttccgtgaagctct 24188559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 685
Target Start/End: Original strand, 21503981 - 21504134
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || ||||||||||| ||||||||||  |||||||| ||||| |||  |||| | |||||||||||  || | ||||||||||||||| ||||    
T  21503981 aaaactttattaattgaatccatcaaataagaaagggttcatcttggaatcctgatcaaaa-aggtttagttgctcacgacaacaaacatcattataaaa 21504079  T
Q  631 caatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
     |||||||||| ||||  ||||| | |||| ||||||| | ||||| ||| ||||    
T  21504080 taatagaaaaacatactttagagtgaacaataggaggatgaagatcatctacctt 21504134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 572
Target Start/End: Complemental strand, 25397416 - 25397066
Alignment:
Q  202 tattagtttatgacgtgtcttttgatttaagaaagtagact-atgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaat 300  Q
    |||||||||||||| |||||||| | |||| |||||||| | ||||||   |  || ||| ||| |||||||| ||| | ||||| |||||| ||||| |    
T  25397416 tattagtttatgacatgtcttttaaattaaaaaagtagagttatgacctcgttatatagcggtgaaagttttatttttatatcaccgcaattcaaccagt 25397317  T
Q  301 tataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgt 400  Q
    |||||||| || ||| |||||| || || | ||||| |||||||||||| ||||||| |||| ||||||||   |||||||||||  |||| |||  |||    
T  25397316 tataattggggtgttcccttaagat-gacttaaaactctaaattcatacctagattcgattaaaagaatttaattaagaaactaataaattcaccgttgt 25397218  T
Q  401 cttatttggacggaagtaggattgtcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaatta 500  Q
    |||  |||    | |||||| || ||| ||||||||||| |||||||||||| ||  ||  |||| |||||||| |||||||||| ||||              
T  25397217 cttggttgatatggagtagggttttcagtcctataatccccctagagatcaggtttctcagtggtctgaaaaagcattagaaacagacat---------- 25397128  T
Q  501 aatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcat 572  Q
              ||||||||||||||||  ||| ||||| || |||||||| ||||||||||||||||||||||    
T  25397127 ----------ttgaatcataaactgatcaaacaactttattaattgaatacaacaaataagaagaggttcat 25397066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 660
Target Start/End: Complemental strand, 30999422 - 30999353
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaa 660  Q
    ||||||||||||   |||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||    
T  30999422 agaggtttagtttctcatggcaacaaacatcataagaaaacaatagaaaaacataccctagagagaacaa 30999353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 505 - 669
Target Start/End: Original strand, 15453880 - 15454042
Alignment:
Q  505 agacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttgg 604  Q
    ||||| |||||||||||| | |||||||| ||| || | ||||||||| |||||||  ||||||||||| |||| ||| | |||| || ||||||| |      
T  15453880 agacaattgaatcataaattcaataaaaa-ctttattagttgaatccatcaaataaatagaggttcatcgtggatcccaa-tcaagagtggtttagctac 15453977  T
Q  605 acatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggag 669  Q
     ||||| |||  |||||||||  ||| |||| ||||||||| ||||||||| |||||||||||||    
T  15453978 ccatggtaactgacatcattatcaaataatataaaaatataacctagagagaacaagaggaggag 15454042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 711 - 752
Target Start/End: Complemental strand, 25474526 - 25474485
Alignment:
Q  711 ttatgaatgaatcaaatagtgtgcaagggtctctatttatag 752  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  25474526 ttatgaatgaataaaatagtgtgcaagggtctctatttatag 25474485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 18819548 - 18819482
Alignment:
Q  304 aattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattt 371  Q
    |||||||||||| |||||| || |||||| | |||||||||||||||||||||| |||| ||||||||    
T  18819548 aattgcggcgttcccttaagat-gagtcatagccctaaattcatacttagattcgattaaaagaattt 18819482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 530 - 665
Target Start/End: Complemental strand, 25460633 - 25460499
Alignment:
Q  530 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 629  Q
    |||||||| || ||| ||||| ||||||||||||    |||||| || ||| ||| |||| | |||||||||||  ||||  ||  || |||||||||||    
T  25460633 aaaaactttattaatagaatctaacaaataagaacgtattcatcgtgaaactctaatcaa-ataggtttagttgcgcatgaaaatcaaaatcattacaaa 25460535  T
Q  630 acaatagaaaaatataccctagagaggacaagagga 665  Q
    |||||||||||| |||| |||||||| |||||||||    
T  25460534 acaatagaaaaacatacactagagagaacaagagga 25460499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 487 - 642
Target Start/End: Original strand, 27917404 - 27917556
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagt 586  Q
    |||||||| |||||||||||||  | || | ||||||| ||||||||  || || ||| |||||||||||||| ||||  | ||| | | ||| |||| |    
T  27917404 acatatacgaattaaatcagactttcgatt-ataaactaaataaaaacatt-attaatggaatccaacaaataggaaggtgatcaacgttgaaacctaat 27917501  T
Q  587 caatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaat 642  Q
    ||| ||| |||||||||  |||||||||  ||||||||||||||||||||||||||    
T  27917502 caa-agaagtttagttgctcatggcaaccgacatcattacaaaacaatagaaaaat 27917556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 635
Target Start/End: Complemental strand, 35708458 - 35708374
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaata 635  Q
    |||||||||||||||   ||||||| ||||||| || ||||  ||||||||||||  |||||||||| ||||||| |||||||||||    
T  35708458 tccaacaaataagaatgagttcatcgtggaaccttaatcaa--gaggtttagttgctcatggcaacatacatcataacaaaacaata 35708374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 641
Target Start/End: Original strand, 16593198 - 16593288
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    ||||| |||||||||| ||| |||| ||||||| ||  |||  ||||||||||||  ||| |||||||||||||  |||||||||||||||||    
T  16593198 tccaataaataagaaggggtacatcgtggaaccttaaccaa--gaggtttagttgctcattgcaacaaacatcaaaacaaaacaatagaaaaa 16593288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 786
Target Start/End: Complemental strand, 18819195 - 18819123
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaaat 786  Q
    ||||| ||| ||| ||| |||||||||||||||||||| | ||| | |||||| | |||||||||||||||||    
T  18819195 tgaataaataaaagagtttgcaagggtctctatttataatacatcattacttaggagttaagagaagaaaaat 18819123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 19593163 - 19593107
Alignment:
Q  116 taggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccccatt 172  Q
    ||||||||||||||| ||| | ||||| |||||||| |||| |||||||||||||||    
T  19593163 taggttggtttgattcagatgtgtaacaacgattaggaaattcttgaatcccccatt 19593107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 19948942 - 19949011
Alignment:
Q  551 caacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatca 622  Q
    |||||||||||||  | |||||| |||||||||| ||||  ||||||||||||  |||||||||||||||||    
T  19948942 caacaaataagaaaggattcatcgtggaaccctaatcaa--gaggtttagttgctcatggcaacaaacatca 19949011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 784
Target Start/End: Complemental strand, 31262473 - 31262405
Alignment:
Q  716 aatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaa 784  Q
    ||||||| ||| ||||| |||| ||||||||||||||||||| | |||||| ||| ||||| |||||||    
T  31262473 aatgaataaaagagtgtacaagtgtctctatttatagtgcatcattacttaggggataagaaaagaaaa 31262405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 652
Target Start/End: Complemental strand, 1733777 - 1733693
Alignment:
Q  566 ggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctaga 652  Q
    |||||||| || ||||||| ||||  ||||||||||||  |||| ||||| ||||||| ||||||||| ||||||| |||| |||||    
T  1733777 ggttcatcgtgaaaccctaatcaa--gaggtttagttgctcatgacaacatacatcataacaaaacaaaagaaaaacatacactaga 1733693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 793
Target Start/End: Original strand, 18533128 - 18533211
Alignment:
Q  710 tttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaa--tacttacgggttaagagaagaaaaatgggattt 793  Q
    ||||||||||||  |||| ||| ||||||||||||||||||||  ||| ||  |||||| || |||||||||||||||||| ||||    
T  18533128 tttatgaatgaagaaaattgtgggcaagggtctctatttatag--cattaagttacttagggattaagagaagaaaaatggaattt 18533211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 623
Target Start/End: Original strand, 23909082 - 23909154
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcat 623  Q
    |||||||||||||||| | |||||| |||||||||  |||  |||||||||||||  |||||||||| |||||||    
T  23909082 tccaacaaataagaagggattcatcgtggaaccctgatca--agaggtttagttgctcatggcaacatacatcat 23909154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 747
Target Start/End: Original strand, 27917616 - 27917655
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatt 747  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  27917616 gctttctgaatgaataaaatagtgtgcaagggtctctatt 27917655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 752
Target Start/End: Original strand, 19949104 - 19949146
Alignment:
Q  710 tttatgaatgaatcaaatagtgtgcaagggtctctatttatag 752  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||    
T  19949104 tttatgaataaataaaatagtgggcaagggtctctatttatag 19949146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 487 - 622
Target Start/End: Complemental strand, 22511606 - 22511471
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaa--cttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    |||||||||||||||| |||||| | || | ||||||| |||||||||  ||| || ||| ||||| ||||||||| ||  ||||| |||||||||||||    
T  22511606 acatatacaaattaaaccagacattagatt-ataaacttaataaaaaaaactttattaatggaatctaacaaataataaagggttcttcatggaacccta 22511508  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatca 622  Q
     |||| | | |||||||||  ||||| ||| |||||||    
T  22511507 atcaa-ataagtttagttgctcatggaaaccaacatca 22511471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 4e-53; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 409 - 784
Target Start/End: Complemental strand, 18178971 - 18178585
Alignment:
Q  409 gacggaagtaggattgtcaatcctataatccacctagagatcagtttcatcgttggtttgaaaaagtattagaaacaaacatatacaaattaaatcagac 508  Q
    |||| ||||||  ||||||||||| ||||||||||||||||||||||| | ||||||   |||||| |||| |||   ||||||||||||||||||| ||    
T  18178971 gacgaaagtagtgttgtcaatcctgtaatccacctagagatcagtttcgttgttggtcaaaaaaagcattaaaaatggacatatacaaattaaatcaaac 18178872  T
Q  509 acttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacat 608  Q
    | |  |||| ||||||||||| ||||||| || |||| ||||| |||| |||| |||| |||||| ||||| |||| |||| | | ||||||| | ||||    
T  18178871 aatcaaatcttaaactgaata-aaaactttattaatttaatcctacaagtaagcagagtttcatcttggaatcctaatcaa-ataagtttagtagtacat 18178774  T
Q  609 ggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgaccctt- 707  Q
     |||||  |||| |||||||||||||| ||||| ||||||||||||| |||||||||||| | ||||||||  ||||||||||||| ||||||||| ||     
T  18178773 cgcaactgacattattacaaaacaata-aaaaaaataccctagagagaacaagaggaggatgaagatcctccacctttaagctctgatgtttgaccattg 18178675  T
Q  708 -------------gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagagaagaaaa 784  Q
                 ||||| ||||||||| ||| |||||||||||||||||||| ||| ||||| | |||||| |||||||||||||||||    
T  18178674 ccttgtaccattagctttttgaatgaataaaaaagtgtgcaagggtctctattgatattgcatcattacttaggggttaagagaagaaaa 18178585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 495 - 709
Target Start/End: Original strand, 19763258 - 19763471
Alignment:
Q  495 aaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagag 594  Q
    |||||||||||||||||||||||||| ||| ||||||| | || || |||||||||||||||||||||||  |||||||| ||||||||| | || ||||    
T  19763258 aaattaaatcagacacttgaatcatacactaaataaaataatttattaattgaatccaacaaataagaaggagttcatcaaggaaccctaattaa-agag 19763356  T
Q  595 gtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctg 694  Q
    ||||||||| |||||  |||||||||||||| ||||  |||||||||  |||||| ||||| |||||||||||| | ||||||||| |||| ||||| ||    
T  19763357 gtttagttgtacatgttaacaaacatcattataaaaatatagaaaaacttacccttgagagaacaagaggaggatgaagatcctctgccttgaagctttg 19763456  T
Q  695 gtgtttgacccttgc 709  Q
     ||||||||||||||    
T  19763457 atgtttgacccttgc 19763471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 478 - 707
Target Start/End: Complemental strand, 30791375 - 30791150
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| || |||||||||||| |||||||||| ||||  || |||    
T  30791375 tagaaacaaacatatacaaattaaatcaaacacttaaatcataaactgaata-aaaactttattaattgaatccaaaaaataagaaggggtttctcgtgg 30791277  T
Q  578 aaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcc 677  Q
    ||||||  |||| ||||||||||||| ||||| || || ||  ||||||||| ||||||| ||  || |||||||||| |||||||||| |   ||||||    
T  30791276 aaccctgatcaa-agaggtttagttgcacatgacagcatac--cattacaaagcaatagacaagcatgccctagagagaacaagaggagaatcaagatcc 30791180  T
Q  678 tcttcctttaagctctggtgtttgaccctt 707  Q
    ||| |||| |||||||| || |||| ||||    
T  30791179 tctgccttaaagctctgatgcttgaacctt 30791150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 538 - 704
Target Start/End: Complemental strand, 20084201 - 20084036
Alignment:
Q  538 cataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaataga 637  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| |||||||| |||||| ||||| ||||||||||||| |||| |    
T  20084201 cataaattgaatccaacaaataagaaggggttcatcatggaaccctaatcaa-agagatttagttgcacatggtaacaaccatcattacaaaataatata 20084103  T
Q  638 aaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacc 704  Q
    |||| ||||||||||||| |||| |||| || |  |||| |||||||| ||| |||| || ||||||    
T  20084102 aaaacataccctagagagaacaacaggatgatgaggatcttcttccttgaagttctgatgcttgacc 20084036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 489 - 784
Target Start/End: Original strand, 7742244 - 7742554
Alignment:
Q  489 atatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataa---attgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||    || |   |||  ||||||||||||||||| |||||||| ||||||||||     
T  7742244 atatacaaattaaatcagacattcgaatcataaactgaataaaaaaaaaaattattgattatatccaacaaataagaag-ggttcatcttggaaccctaa 7742342  T
Q  586 tcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    | || ||| ||||||||| ||||| ||||  ||||||||| |||||| |||||||||||||| | ||||  ||||||||| || | |||||||||  |||    
T  7742343 ttaa-agaagtttagttgcacatgacaacggacatcattagaaaacagtagaaaaatataccattgagaaaacaagaggatgatgaagatcctctgactt 7742441  T
Q  686 taagctctggtgtttgacccttg--------------ctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggt 771  Q
     ||||| || |||||||||||||              |||| ||||||| | ||| |||||||||||||||||||||||| ||||| | | |||| ||||    
T  7742442 gaagctttgatgtttgacccttgccttgtaccactaactttttgaatgattaaaagagtgtgcaagggtctctatttataatgcatcattgcttaggggt 7742541  T
Q  772 taagagaagaaaa 784  Q
    |||||||||||||    
T  7742542 taagagaagaaaa 7742554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 543 - 661
Target Start/End: Complemental strand, 17028965 - 17028848
Alignment:
Q  543 attgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaat 642  Q
    ||||||||||||||||||||||||||||||| | |||||||  |||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||||||    
T  17028965 attgaatccaacaaataagaagaggttcatcttagaaccctgatcaa-agaggtttagttgcacatggtaacatacatcattacaaatcaatagaaaaat 17028867  T
Q  643 ataccctagagaggacaag 661  Q
    |||||||| |||| |||||    
T  17028866 ataccctaaagagaacaag 17028848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 547 - 677
Target Start/End: Complemental strand, 20695325 - 20695196
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    |||||||||||||||||| |||||||| | |||||||| |||| |||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||    
T  20695325 aatccaacaaataagaaggggttcatcgtagaaccctaatcaa-agagttttagttgcacatggcagcatacatcattacaaaacaatagaaaaacatac 20695227  T
Q  647 cctagagaggacaagaggaggagggagatcc 677  Q
    ||||||||| | |||| ||||| | ||||||    
T  20695226 cctagagagaaaaagaagaggatgaagatcc 20695196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 546 - 778
Target Start/End: Original strand, 18281629 - 18281875
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    ||||||||||||||||||| ||||| || |||||| ||| |||| ||||||||||||   |||||||||  |||||||| || || ||||||||||||||    
T  18281629 gaatccaacaaataagaagtggttcgtcgtggaacgctaatcaa-agaggtttagttactcatggcaaccgacatcattgcataaaaatagaaaaatata 18281727  T
Q  646 ccctagagaggacaagaggaggagggagatcctcttcctttaagct-ctggtgtttgac-----cctt---------gctttatgaatgaatcaaatagt 730  Q
    |||||||||| ||||||||| || |||| |||||| |||| ||||| ||| ||||||||     ||||         ||||| ||||||||  ||| |||    
T  18281728 ccctagagagaacaagaggacgatggaggtcctctaccttgaagctcctgatgtttgacgtttgccttgcactgctagctttctgaatgaagaaaagagt 18281827  T
Q  731 gtgcaagggtctctatttatagtgcataaatacttacgggttaagaga 778  Q
    ||||||||||| ||||||||| ||||| | |||||| |||||||||||    
T  18281828 gtgcaagggtcactatttatattgcatgattacttaggggttaagaga 18281875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 531 - 685
Target Start/End: Original strand, 17381407 - 17381560
Alignment:
Q  531 aaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaa 630  Q
    ||||||| || ||||||||||||||||||||||| | |||||| || || |  | | || ||||||||||||| | ||||||||||||||||||| ||||    
T  17381407 aaaactttattaattgaatccaacaaataagaagggattcatcttgaaaactaaattaa-agaggtttagttgcatatggcaacaaacatcattataaaa 17381505  T
Q  631 caatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctt 685  Q
    ||||| ||| | ||||||||||||| |||| ||||||| ||||||||||| ||||    
T  17381506 caatataaatacataccctagagagaacaaaaggaggatggagatcctctgcctt 17381560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 489 - 662
Target Start/End: Complemental strand, 24131383 - 24131210
Alignment:
Q  489 atatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtca 588  Q
    ||||||||||| ||| |||| ||||||||||||| ||||| |     || || ||||||||||||||||||| |||||||||||| |||||||| | |||    
T  24131383 atatacaaattgaattagacgcttgaatcataaattgaattattttttttattaattgaatccaacaaataataagaggttcatcttggaaccccaatca 24131284  T
Q  589 atagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaaga 662  Q
    | ||||||||||||  |||||| |||  |||||||||||||| |||| ||||  ||| ||||||||| ||||||    
T  24131283 agagaggtttagtttcacatggtaaccgacatcattacaaaataatataaaagcatatcctagagagaacaaga 24131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 566 - 709
Target Start/End: Complemental strand, 22930642 - 22930499
Alignment:
Q  566 ggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagagga 665  Q
    |||||||| ||||||| || |||| |||||||| |||| ||| |  | || ||||||||||||||||||||||||| ||| ||||||||  |||| ||||    
T  22930642 ggttcatcgtggaaccttaatcaagagaggttttgttgcacacgatagcatacatcattacaaaacaatagaaaaacataacctagagataacaaaagga 22930543  T
Q  666 ggagggagatcctcttcctttaagctctggtgtttgacccttgc 709  Q
    ||| ||||||||||| |||| |||||||  ||||||||||||||    
T  22930542 ggatggagatcctctaccttaaagctcttatgtttgacccttgc 22930499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 546 - 668
Target Start/End: Original strand, 12265022 - 12265143
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    |||||||  |||||||||| |||||||| |  ||||||| |||| |||||||||||||  |||| ||| | |||||||||||||||||||||||||||||    
T  12265022 gaatccattaaataagaaggggttcatcttataaccctaatcaa-agaggtttagttgctcatgacaatacacatcattacaaaacaatagaaaaatata 12265120  T
Q  646 ccctagagaggacaagaggagga 668  Q
    | |||||||| ||||||| ||||    
T  12265121 cactagagagaacaagagaagga 12265143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 591 - 709
Target Start/End: Original strand, 25594115 - 25594233
Alignment:
Q  591 agaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagc 690  Q
    ||||||||||||   ||| |||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| | ||| ||||||||||  |||    
T  25594115 agaggtttagttactcattgcaacaaacatcataacaaaacaatagaaaaacatatcttagagagaacaagaggaggatgaagaccctcttccttggagc 25594214  T
Q  691 tctggtgtttgacccttgc 709  Q
    |||| ||||| ||||||||    
T  25594215 tctgatgtttaacccttgc 25594233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 203 - 371
Target Start/End: Original strand, 14207842 - 14208009
Alignment:
Q  203 attagtttatgacgtgtcttttgatttaagaaagtagactatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaatta 302  Q
    ||||||||||||| ||||||| ||||||||||||||||  |||  |  ||| |  | || ||||||||||| ||| |  |  | |||||||||||| |||    
T  14207842 attagtttatgacatgtctttcgatttaagaaagtagaacatggacacatgatgtatcaatggaagttttattttaatcttgccgcaatttaaccagtta 14207941  T
Q  303 taattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattt 371  Q
     ||||||||||||||||||| |  || | | ||||||||||||||||||||||||||||| ||||||||    
T  14207942 caattgcggcgtttccttaagac-gaataataaccctaaattcatacttagattcaattaaaagaattt 14208009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 24268786 - 24268667
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    ||||||||||||||||||| |||||||  ||||| |||| ||||  ||||||||||||  |||||||| | ||||||| ||||||||||| ||||| |||    
T  24268786 gaatccaacaaataagaag-ggttcattttggaatcctaatcaa--gaggtttagttgctcatggcaatatacatcataacaaaacaatataaaaacata 24268690  T
Q  646 ccctagagaggacaagaggagga 668  Q
    ||||| |||| ||||||| ||||    
T  24268689 ccctaaagagaacaagagaagga 24268667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 24345416 - 24345297
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    ||||||||||||||||||| |||||||  ||||| |||| ||||  ||||||||||||  |||||||| | ||||||| ||||||||||| ||||| |||    
T  24345416 gaatccaacaaataagaag-ggttcattttggaatcctaatcaa--gaggtttagttgctcatggcaatatacatcataacaaaacaatataaaaacata 24345320  T
Q  646 ccctagagaggacaagaggagga 668  Q
    ||||| |||| ||||||| ||||    
T  24345319 ccctaaagagaacaagagaagga 24345297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 40 - 471
Target Start/End: Complemental strand, 22931085 - 22930656
Alignment:
Q  40 ggaatttattagaagtaaataaaacagtaaagat-aaagtggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcg 138  Q
    ||||| ||||| ||||||||| || || ||| || ||||| |||| |  ||||||||| || ||| |||| ||||||| || |||||||||| | | |||    
T  22931085 ggaatgtattaaaagtaaatagaatagaaaatatgaaagtagttgcattgttttaattgttttgcccaatacgagattcgggtggtttgattcaaatgcg 22930986  T
Q  139 taacgacgattagaaaatccttgaatcccccattttgtctttgctcggattaaagatgttagttattagtttatgacgtgtcttttgatttaagaaagta 238  Q
    ||||| ||||||| |||| ||| |||||||  ||| ||||||| | | ||||| |  ||||| | |||||| ||||| |||||||||||||| |||||||    
T  22930985 taacggcgattaggaaattcttcaatcccc--tttcgtctttgtttgaattaatgcagttagctgttagtt-atgacttgtcttttgatttacgaaagta 22930889  T
Q  239 ga-ctatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaattataattgcggcgtttccttaaaattgagtcaaaacc 337  Q
    ||  |||||||   || || | | |||||||||| | ||| | ||| | |||||| ||| | ||| ||||| || ||| || | | | ||| |||||||     
T  22930888 gagttatgacctcgtgatatatcggtggaagtttgatttttatatcgccgcaattcaactagttacaattggggtgttcccctgaga-tgattcaaaact 22930790  T
Q  338 ctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttacctatgtcttatttggacggaagtaggattgtcaatcctataat 437  Q
    |||| |||||||||||| ||||||| || |||||   | ||||| ||  |||||||     |||||  | || || ||||||| |||||| |||||||||    
T  22930789 ctaagttcatacttagactcaattaaaataatttaattgagaaagtagacaatttatggtcgtctttgtcggtcgaaagtagggttgtcagtcctataat 22930690  T
Q  438 ccacctagagatcagtttcatcgttggtttgaaa 471  Q
    |||| ||||||||| |||||| ||||||||||||    
T  22930689 ccacttagagatcaatttcattgttggtttgaaa 22930656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 668
Target Start/End: Original strand, 26329532 - 26329594
Alignment:
Q  606 catggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||    
T  26329532 catggcaacaaacatcataacaaaacaatagaaaaacataccctagagaggataagagaagga 26329594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 595 - 712
Target Start/End: Original strand, 31340817 - 31340932
Alignment:
Q  595 gtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctctg 694  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||| |||    |||||| |||||| |||||  |||||||||| |||| |||||  |    
T  31340817 gtttagttgcacatgacaacatacatcattacaaaacaatagaaaaacata--taagagagaacaagaagaggattgagatcctctgccttgaagcttcg 31340914  T
Q  695 gtgtttgacccttgcttt 712  Q
     |||||||||||||||||    
T  31340915 atgtttgacccttgcttt 31340932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 547 - 679
Target Start/End: Original strand, 16622058 - 16622188
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    ||||||||||| |||||| ||||| || | |||||||| | || ||||||||||||| ||||| ||||| ||  ||| ||||||||||||||||| ||||    
T  16622058 aatccaacaaacaagaag-ggttcttcttcgaaccctaattaa-agaggtttagttgcacatgacaacatacgccataacaaaacaatagaaaaacatac 16622155  T
Q  647 cctagagaggacaagaggaggagggagatcctc 679  Q
    |||| |||| ||||||| |||| ||||| ||||    
T  16622156 cctaaagagaacaagagaaggatggagaccctc 16622188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 15694640 - 15694722
Alignment:
Q  566 ggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccct 649  Q
    |||||||  |||||||||| |||| ||||||||| ||  ||||||||||  |||||||||||||||||||||||||||||||||    
T  15694640 ggttcattgtggaaccctaatcaa-agaggtttaatttcacatggcaactgacatcattacaaaacaatagaaaaatataccct 15694722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 601
Target Start/End: Complemental strand, 24846856 - 24846771
Alignment:
Q  514 aatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagt 601  Q
    |||||||||||||||| ||| ||| ||||||||||||||| |||||||||||| ||||| ||||||||||| |||| ||| |||||||    
T  24846856 aatcataaactgaatagaaa-ctttataaattgaatccaaaaaataagaagagattcat-atggaaccctaatcaagagaagtttagt 24846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 669
Target Start/End: Original strand, 12339457 - 12339575
Alignment:
Q  549 tccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccc 648  Q
    ||||| |||||||||| |||||||| |||||||||| ||||  |||| |||||||  |||||||||||| ||||| |||||| |||||||||  || |||    
T  12339457 tccaataaataagaaggggttcatcgtggaaccctaatcaa--gaggattagttgctcatggcaacaaagatcataacaaaataatagaaaaccatgccc 12339554  T
Q  649 tagagaggacaagaggaggag 669  Q
    |||| || | || ||||||||    
T  12339555 tagaaagaataaaaggaggag 12339575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 709 - 778
Target Start/End: Original strand, 23157379 - 23157448
Alignment:
Q  709 ctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttacgggttaagaga 778  Q
    |||| ||||||||| ||||||||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  23157379 ctttctgaatgaataaaatagtgtgcaagggtctctttttataatgcatgattacttaggggttaagaga 23157448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 394
Target Start/End: Complemental strand, 20695803 - 20695611
Alignment:
Q  203 attagtttatgacgt-gtctttt--gatttaagaaagtagactatgaccctatggtaaagcagtggaagttttagtttcagatcactgcaatttaaccaa 299  Q
    ||||||||||||| | |||||||  ||||||| ||||||||  ||||||  ||| | || || ||||||||| | ||| | ||||| |||||| |||||     
T  20695803 attagtttatgactttgtctttttggatttaaaaaagtagaagatgaccaaatgatgaatcaatggaagttt-attttaaaatcaccgcaattcaaccag 20695705  T
Q  300 ttataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaattagaagaattttggtaagaaactaaccaatttac 394  Q
    ||| | |||| ||||| ||| || || |||||| ||||||||||||||||| ||||||||||| ||||||||   | ||||||||| ||||||||    
T  20695704 ttacatttgcagcgttccctcaagat-gagtcataaccctaaattcatactaagattcaattaaaagaatttaatttagaaactaagcaatttac 20695611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 612 - 655
Target Start/End: Complemental strand, 30072747 - 30072704
Alignment:
Q  612 aacaaacatcattacaaaacaatagaaaaatataccctagagag 655  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  30072747 aacaaacatcataacaaaacaatagaaaaatataccctagagag 30072704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 652
Target Start/End: Complemental strand, 22230469 - 22230336
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    ||||||||||| |||||||| || |||  | |||||||||||  ||| |||||||| |||||| ||| | || | |||||||||||  | ||| ||||||    
T  22230469 ataaactgaatgaaaaactttattaataaattccaacaaatagcaaggggttcatcgtggaactctaataaaaa-aggtttagttgctcgtggaaacaaa 22230371  T
Q  618 catcattacaaaacaatagaaaaatataccctaga 652  Q
    |||||| | |||||| |||||||| ||||||||||    
T  22230370 catcataagaaaacagtagaaaaacataccctaga 22230336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 670
Target Start/End: Complemental strand, 25945924 - 25945811
Alignment:
Q  556 aataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagag 655  Q
    |||||||||||||||||| | ||||| || |||| | ||| ||||||| |||||  |||  |||||||||||||| |||| ||||||||||| || | ||    
T  25945924 aataagaagaggttcatcttagaaccttaatcaa-ataggcttagttgtacatgataaccgacatcattacaaaataataaaaaaatataccttaaatag 25945826  T
Q  656 gacaagaggaggagg 670  Q
     ||||||||||||||    
T  25945825 aacaagaggaggagg 25945811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 668
Target Start/End: Complemental strand, 24842408 - 24842259
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||||| ||| |||||||| || |||   || || ||||||||||| |||||||| |||||||||| |||  ||| ||||| |||  |||| |||||     
T  24842408 cataaactaaatgaaaaactttattaataatattcatcaaataagaaggggttcatcttggaaccctaatca--agatgtttacttgttcatgacaacat 24842311  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    | ||||| ||||||||||||||||  ||||  ||||||| ||||||| ||||    
T  24842310 atatcataacaaaacaatagaaaagcatactatagagagaacaagagaagga 24842259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 545 - 668
Target Start/End: Original strand, 18451650 - 18451772
Alignment:
Q  545 tgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatat 644  Q
    |||||||||||||||||||  |||||||| |   |||||| | || |||||||||||||  ||||  |||| |||| |  ||||||||||||||||| ||    
T  18451650 tgaatccaacaaataagaaagggttcatcttatcaccctaattaa-agaggtttagttgctcatgaaaacagacataaaaacaaaacaatagaaaaacat 18451748  T
Q  645 accctagagaggacaagaggagga 668  Q
    | ||||||||| |||||| |||||    
T  18451749 atcctagagagaacaagaagagga 18451772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 716 - 778
Target Start/End: Complemental strand, 25368152 - 25368089
Alignment:
Q  716 aatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatacttac-gggttaagaga 778  Q
    ||||||| ||||||||||||| |||||||||||||||||||| | ||| ||| |||||||||||    
T  25368152 aatgaataaaatagtgtgcaatggtctctatttatagtgcatgattacgtacagggttaagaga 25368089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 670
Target Start/End: Original strand, 17694916 - 17694990
Alignment:
Q  596 tttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagg 670  Q
    |||| ||| |||||| | || |||||||||||||||||||||| || |||||||||| || || |||||||||||    
T  17694916 tttaattgcacatggaagcacacatcattacaaaacaatagaataacataccctagaaagaaccagaggaggagg 17694990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 668
Target Start/End: Complemental strand, 20715274 - 20715156
Alignment:
Q  548 atccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacc 647  Q
    ||||||||||||||||   ||||||| || ||||||| ||||  ||||||| ||||  || | ||||||||||||  ||||||||||||||||| ||| |    
T  20715274 atccaacaaataagaaagagttcatcttgaaaccctaatcaa--gaggtttggttgctcaagacaacaaacatcaaaacaaaacaatagaaaaacatatc 20715177  T
Q  648 ctagagaggacaagaggagga 668  Q
     || |||| ||||||| ||||    
T  20715176 atatagagaacaagagaagga 20715156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 7742063 - 7742134
Alignment:
Q  288 caatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaat 360  Q
    ||||| ||||| ||| ||||| | |||| |||||| || |||||||||||||||| |||||||||||||||||    
T  7742063 caattcaaccagttacaattgtgacgttcccttaagat-gagtcaaaaccctaaaatcatacttagattcaat 7742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 692
Target Start/End: Original strand, 22643430 - 22643508
Alignment:
Q  617 acatcattacaaaacaataga---aaaatataccctagagaggacaagaggaggagggagatcctcttcctttaagctc 692  Q
    ||||||||||||||||| |||   |||| ||||||||||||| ||||||||| || ||| ||| |||||||| ||||||    
T  22643430 acatcattacaaaacaaaagagagaaaaaataccctagagagaacaagaggatgatggatatcttcttccttgaagctc 22643508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 273
Target Start/End: Complemental strand, 30791518 - 30791446
Alignment:
Q  201 ttattagtttatgacgtgtcttttgatttaagaaagtagactatgaccctatggtaaagcagtggaagtttta 273  Q
    ||||||||||||||| |||| |||||||||||||||||||  |||| || ||| | ||  |||||||||||||    
T  30791518 ttattagtttatgacatgtcgtttgatttaagaaagtagaacatgatcccatgatgaataagtggaagtttta 30791446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 478 - 534
Target Start/End: Complemental strand, 30803345 - 30803290
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaa 534  Q
    |||||| | ||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  30803345 tagaaatagacatatacaaattaaat-agatacttgaatcataaattgaataaaaaa 30803290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 288 - 362
Target Start/End: Original strand, 18281404 - 18281477
Alignment:
Q  288 caatttaaccaattataattgcggcgtttccttaaaattgagtcaaaaccctaaattcatacttagattcaatta 362  Q
    ||||| ||||| ||| |||||||| |||  ||||| || |||| | |||||||||||||||||||||||||||||    
T  18281404 caattcaaccatttacaattgcggagttctcttaagat-gagttataaccctaaattcatacttagattcaatta 18281477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 752
Target Start/End: Original strand, 23125500 - 23125538
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttatag 752  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  23125500 tgaatgaataaaatattgtgcaagggtctctatttatag 23125538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 543 - 613
Target Start/End: Complemental strand, 24517823 - 24517754
Alignment:
Q  543 attgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaa 613  Q
    ||||||||||||||||||||| ||||||||| |  ||||||| | || ||||||||| ||| |||||||||    
T  24517823 attgaatccaacaaataagaataggttcatcttaaaaccctaat-aaaagaggtttaattgcacatggcaa 24517754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 653
Target Start/End: Complemental strand, 15339277 - 15339168
Alignment:
Q  544 ttgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaata 643  Q
    |||||| ||||||||||  || ||||||||  | || |||| ||| |||||||||||||  |||||  ||||||||||||| ||||| || ||||||  |    
T  15339277 ttgaattcaacaaataaatagtggttcatctagaaatcctaatcattagaggtttagttacacatgataacaaacatcattgcaaaagaaaagaaaagca 15339178  T
Q  644 taccctagag 653  Q
    ||| ||||||    
T  15339177 tactctagag 15339168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 749
Target Start/End: Complemental strand, 22230262 - 22230229
Alignment:
Q  716 aatgaatcaaatagtgtgcaagggtctctattta 749  Q
    ||||||| ||||||||||||||||||||||||||    
T  22230262 aatgaataaaatagtgtgcaagggtctctattta 22230229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 751
Target Start/End: Complemental strand, 22755479 - 22755442
Alignment:
Q  714 tgaatgaatcaaatagtgtgcaagggtctctatttata 751  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  22755479 tgaatgaataaaatagtgtgcaagagtctctatttata 22755442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 78; Significance: 7e-36; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 478 - 694
Target Start/End: Original strand, 11016 - 11231
Alignment:
Q  478 tagaaacaaacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatgg 577  Q
    ||||||| || ||||||||||||||||||||  | ||||||||||||||||||||| ||| || |||| |||| ||||||| ||||| |||||||| |||    
T  11016 tagaaacgaatatatacaaattaaatcagactatagaatcataaactgaataaaaa-cttgattaattaaatctaacaaatgagaag-ggttcatcgtgg 11113  T
Q  578 aaccctagtcaataga-ggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatc 676  Q
    ||||||| | || | | |||||||||| ||||||||||| | || || ||||||||||||||||||||||| ||||||| ||| |||||||| | | |||    
T  11114 aaccctaataaaaaaaaggtttagttgcacatggcaacataaattatcacaaaacaatagaaaaatataccttagagagaacatgaggaggatgaaaatc 11213  T
Q  677 ctcttcctttaagctctg 694  Q
     ||| |||| ||||||||    
T  11214 atctgccttgaagctctg 11231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 708 - 766
Target Start/End: Original strand, 11259 - 11317
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatactta 766  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||| ||| | ||||||    
T  11259 gctttttgaatgaataaaaaagtgtgcaagtgtctctatttatagtacatcattactta 11317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 67; Significance: 3e-29; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 543 - 709
Target Start/End: Original strand, 8145 - 8310
Alignment:
Q  543 attgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaat 642  Q
    |||| |||||| |||||||||||||||| || | |||||||| |||| | ||||||||||| |||||| |||| ||||  |||||||||||||||||||     
T  8145 attgtatccaaaaaataagaagaggttcttcttcgaaccctaatcaa-ataggtttagttgcacatggaaacatacattgttacaaaacaatagaaaaac 8243  T
Q  643 ataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgc 709  Q
    |||| |||||||| |||||||||||| ||| ||||||| ||||  | ||||| || |||||||||||    
T  8244 atacactagagagaacaagaggaggatggatatcctctaccttggaactctgatgcttgacccttgc 8310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 543 - 709
Target Start/End: Original strand, 11175 - 11340
Alignment:
Q  543 attgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaat 642  Q
    ||||||||||| ||||||||| |||||| || | |||||||| |||| |||||||||| || |||||| |||| ||||| |||||||||||||||||||     
T  11175 attgaatccaaaaaataagaataggttcttcttagaaccctaatcaa-agaggtttaggtgcacatggaaacatacatcgttacaaaacaatagaaaaac 11273  T
Q  643 ataccctagagaggacaagaggaggagggagatcctcttcctttaagctctggtgtttgacccttgc 709  Q
    |||| |||||||| |||||||||||| ||| ||||||| ||||  | || || || |||||||||||    
T  11274 atacactagagagaacaagaggaggatggatatcctctaccttggaactttgatgcttgacccttgc 11340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 546 - 680
Target Start/End: Original strand, 33162 - 33295
Alignment:
Q  546 gaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatata 645  Q
    ||||||||||||||||||| | ||||||||||||||||| |||| ||||| ||||||   |||||||||  ||||||||||||||||||||||||| |||    
T  33162 gaatccaacaaataagaagggcttcatcatggaaccctaatcaa-agaggattagtttatcatggcaaccgacatcattacaaaacaatagaaaaagata 33260  T
Q  646 ccctagagaggacaagaggaggagggagatcctct 680  Q
    | |||||||| |||| | ||||| |||||||||||    
T  33261 ctctagagagaacaaaatgaggacggagatcctct 33295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1587 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1587
Description:

Target: scaffold1587; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 486 - 602
Target Start/End: Original strand, 1247 - 1362
Alignment:
Q  486 aacatatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    |||||||||||||||||| ||||| |||||||||||  ||||||||||| || || ||||||||| |||||||||| | ||||||||| ||||||||||     
T  1247 aacatatacaaattaaataagacatttgaatcataatatgaataaaaaaatt-attaattgaatctaacaaataagtataggttcatcgtggaaccctaa 1345  T
Q  586 tcaatagaggtttagtt 602  Q
    | || ||||||||||||    
T  1346 taaagagaggtttagtt 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 487 - 680
Target Start/End: Complemental strand, 3903 - 3710
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactgaataaaaaa--cttcataaattgaatccaacaaataagaagaggttcatcatggaacccta 584  Q
    ||||||||| ||||||||||||  | || | |||||||||| ||||||  |||  | ||| |||||||||||||||||||||||||||| ||||||| ||    
T  3903 acatatacatattaaatcagactttagatt-ataaactgaaaaaaaaatactttgttaatggaatccaacaaataagaagaggttcatcttggaaccata 3805  T
Q  585 gtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
      ||| ||| |||| ||||  ||||| |||  |||||||||||||| |||||||||  || | |||||||| |||||||||||| |||||||||||    
T  3804 aacaa-agaagtttggttgctcatggtaaccgacatcattacaaaataatagaaaatcattctctagagagaacaagaggaggatggagatcctct 3710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 710 - 766
Target Start/End: Complemental strand, 3663 - 3607
Alignment:
Q  710 tttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatactta 766  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  3663 tttatgaatgaataaactagtgtgcaagggtctctatttatagtgcataattactta 3607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 551 - 668
Target Start/End: Complemental strand, 8348 - 8233
Alignment:
Q  551 caacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacccta 650  Q
    |||||||||||||| |||||||| |||||||||| | ||  ||||||||||||  ||| |||||||||||||| |  |||||||||||||| ||||||||    
T  8348 caacaaataagaaggggttcatcttggaaccctaattaa--gaggtttagttgctcatagcaacaaacatcataatgaaacaatagaaaaaaatacccta 8251  T
Q  651 gagaggacaagaggagga 668  Q
    ||||| ||||||| ||||    
T  8250 gagagaacaagagaagga 8233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 517 - 668
Target Start/End: Original strand, 22008 - 22157
Alignment:
Q  517 cataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaa 616  Q
    |||||| |||||||||||||| || |||   ||||||||||||||| | |||||||||||||||| |  ||||  ||||||||||||  ||||||||||     
T  22008 cataaagtgaataaaaaactttattaataatatccaacaaataagatggggttcatcatggaaccatgatcaa--gaggtttagttgttcatggcaacat 22105  T
Q  617 acatcattacaaaacaatagaaaaatataccctagagaggacaagaggagga 668  Q
    | ||||| ||||||||||| ||| ||||||||| ||||| | ||||| ||||    
T  22106 aaatcataacaaaacaataaaaatatataccctggagagaataagagaagga 22157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 663
Target Start/End: Original strand, 5156 - 5269
Alignment:
Q  548 atccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatacc 647  Q
    ||||||||||| ||||| ||||||||||| ||| ||| ||||  || |||||||||  |||| ||||| ||||||| ||||||||||||||||| ||| |    
T  5156 atccaacaaatcagaagtggttcatcatgaaactctaatcaa--gaagtttagttgctcatgacaacatacatcataacaaaacaatagaaaaacatatc 5253  T
Q  648 ctagagaggacaagag 663  Q
    |||||||| |||||||    
T  5254 ctagagagaacaagag 5269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 547 - 666
Target Start/End: Complemental strand, 37681 - 37563
Alignment:
Q  547 aatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatatac 646  Q
    ||||| ||| |||||||| ||||||||||||||||||| | || |||  ||||||||  |||||||||  || ||||||||||||||| |||||| ||||    
T  37681 aatcctacacataagaaggggttcatcatggaaccctaat-aagagaattttagttgcccatggcaaccgacgtcattacaaaacaattgaaaaacatac 37583  T
Q  647 cctagagaggacaagaggag 666  Q
    ||||||||| ||||| ||||    
T  37582 cctagagagaacaagtggag 37563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 518 - 654
Target Start/End: Original strand, 2412 - 2546
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    ||||||||||| ||||| || || |||  | |||||||||||||||| |||||||  |||||||||| |||  |||||||||||||  |||||||||| |    
T  2412 ataaactgaatgaaaaattttattaataaattccaacaaataagaaggggttcattgtggaaccctaatca--agaggtttagttgctcatggcaacata 2509  T
Q  618 catcattacaaaacaatagaaaaatataccctagaga 654  Q
     ||||| | |||| |||||||||  ||||||||||||    
T  2510 tatcataagaaaataatagaaaatcataccctagaga 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 518 - 654
Target Start/End: Original strand, 2577 - 2711
Alignment:
Q  518 ataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaa 617  Q
    ||||||||||| ||||| || || |||  | |||||||||||||||| |||||||  |||||||||| |||  |||||||||||||  |||||||||| |    
T  2577 ataaactgaatgaaaaattttattaataaattccaacaaataagaaggggttcattgtggaaccctaatca--agaggtttagttgctcatggcaacata 2674  T
Q  618 catcattacaaaacaatagaaaaatataccctagaga 654  Q
     ||||| | |||| |||||||||  ||||||||||||    
T  2675 tatcataagaaaataatagaaaatcataccctagaga 2711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 487 - 680
Target Start/End: Complemental strand, 13035 - 12843
Alignment:
Q  487 acatatacaaattaaatcagacacttgaatcataaactg-aataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctag 585  Q
    ||||||||| ||||||||||||  ||  || |||||||| || |||||||||  | ||| ||||||||||||||||||| || ||||  ||||||| ||     
T  13035 acatatacatattaaatcagact-ttatattataaactggaaaaaaaaactttgttaatggaatccaacaaataagaagtggctcattgtggaaccataa 12937  T
Q  586 tcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcctct 680  Q
     ||| | | |||| ||||  ||||| |||  |||||||||||||| |||||||||  || | |||||||| |||||||||||| |||||||||||    
T  12936 acaa-acaagtttggttgctcatggaaaccgacatcattacaaaataatagaaaatcattctctagagagaacaagaggaggatggagatcctct 12843  T

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Target: scaffold0065; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 708 - 765
Target Start/End: Complemental strand, 12798 - 12741
Alignment:
Q  708 gctttatgaatgaatcaaatagtgtgcaagggtctctatttatagtgcataaatactt 765  Q
    ||||| ||||||||| || | ||||||||||||||||||||||||||||||| |||||    
T  12798 gctttctgaatgaataaactggtgtgcaagggtctctatttatagtgcataattactt 12741  T

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Target: scaffold0624 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 641
Target Start/End: Original strand, 4626 - 4714
Alignment:
Q  551 caacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaaacaatagaaaaa 641  Q
    |||||||||||||  |||||||| | ||||| || |||| | |||||||||||  | ||| ||||||||||||||||||||||||||||||    
T  4626 caacaaataagaaatggttcatcttagaacc-taatcaaaa-aggtttagttgttcgtggtaacaaacatcattacaaaacaatagaaaaa 4714  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 678
Target Start/End: Original strand, 227694 - 227747
Alignment:
Q  625 acaaaacaatagaaaaatataccctagagaggacaagaggaggagggagatcct 678  Q
    |||||||||| |||||| |||| |||||||| |||||||||||| |||||||||    
T  227694 acaaaacaattgaaaaacatactctagagagaacaagaggaggatggagatcct 227747  T

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Target: scaffold0804 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 973 - 870
Alignment:
Q  78 tggttgtaaggttttaattattctgcacaatgcgagattaggttggtttgatttagaagcgtaacgacgattagaaaatccttgaatcccccattttgtc 177  Q
    |||||| | ||||||||||||  ||||||||||||| ||||||| | |||||| |||    ||||  |||||||  ||||||||||||||||| || |||    
T  973 tggttgcagggttttaattatcttgcacaatgcgaggttaggtttgattgattcagatatttaactgcgattagggaatccttgaatcccccacttcgtc 874  T
Q  178 tttg 181  Q
    ||||    
T  873 tttg 870  T

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