View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2853_2D_low_48 (Length: 299)

Name: NF2853_2D_low_48
Description: NF2853_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2853_2D_low_48
NF2853_2D_low_48
[»] chr8 (22 HSPs)
chr8 (9-280)||(5264314-5264585)
chr8 (238-281)||(12988427-12988470)
chr8 (237-280)||(16852338-16852381)
chr8 (236-279)||(19703523-19703566)
chr8 (239-280)||(18540298-18540339)
chr8 (239-280)||(23874417-23874458)
chr8 (241-280)||(2203494-2203533)
chr8 (241-280)||(3624582-3624621)
chr8 (237-272)||(3826820-3826855)
chr8 (239-280)||(20994493-20994534)
chr8 (241-281)||(8794379-8794419)
chr8 (238-273)||(44780156-44780191)
chr8 (239-273)||(30483926-30483960)
chr8 (239-281)||(33017214-33017256)
chr8 (239-280)||(968362-968403)
chr8 (238-279)||(8484998-8485039)
chr8 (239-276)||(11518916-11518953)
chr8 (237-278)||(18897164-18897205)
chr8 (238-278)||(22268970-22269010)
chr8 (238-278)||(28566104-28566144)
chr8 (238-278)||(28573727-28573767)
chr8 (198-238)||(43236543-43236583)
[»] chr1 (14 HSPs)
chr1 (238-280)||(36371469-36371511)
chr1 (237-280)||(4566546-4566589)
chr1 (239-280)||(9165230-9165271)
chr1 (241-280)||(33700808-33700847)
chr1 (239-273)||(31794306-31794340)
chr1 (243-279)||(17745292-17745328)
chr1 (237-273)||(21547522-21547558)
chr1 (237-272)||(40257397-40257432)
chr1 (239-273)||(19528369-19528403)
chr1 (239-280)||(50901581-50901623)
chr1 (239-280)||(51703779-51703820)
chr1 (239-279)||(2219972-2220012)
chr1 (237-273)||(8904412-8904448)
chr1 (238-278)||(39012290-39012330)
[»] chr5 (19 HSPs)
chr5 (239-280)||(7918504-7918545)
chr5 (238-280)||(34984805-34984847)
chr5 (239-280)||(21549172-21549213)
chr5 (239-276)||(25627057-25627094)
chr5 (237-280)||(30883233-30883276)
chr5 (238-280)||(14285160-14285202)
chr5 (239-280)||(21589288-21589329)
chr5 (237-273)||(16436616-16436652)
chr5 (237-280)||(87458-87501)
chr5 (239-278)||(892511-892550)
chr5 (238-273)||(22737081-22737116)
chr5 (238-273)||(26078093-26078128)
chr5 (238-273)||(26598523-26598558)
chr5 (239-273)||(5390892-5390926)
chr5 (239-273)||(29075781-29075815)
chr5 (239-272)||(3252332-3252365)
chr5 (239-276)||(19043458-19043495)
chr5 (239-279)||(3915034-3915074)
chr5 (233-273)||(43241724-43241764)
[»] chr2 (14 HSPs)
chr2 (239-280)||(42922414-42922455)
chr2 (237-280)||(42602552-42602595)
chr2 (239-280)||(40416425-40416466)
chr2 (239-280)||(42327430-42327471)
chr2 (237-280)||(29503269-29503312)
chr2 (237-279)||(4060250-4060292)
chr2 (239-276)||(11062360-11062397)
chr2 (238-279)||(37480074-37480115)
chr2 (237-273)||(1729814-1729850)
chr2 (239-273)||(16381696-16381730)
chr2 (237-267)||(34041636-34041666)
chr2 (239-268)||(9318121-9318150)
chr2 (240-273)||(16918620-16918653)
chr2 (240-280)||(37756006-37756046)
[»] chr7 (20 HSPs)
chr7 (234-278)||(45559195-45559239)
chr7 (239-280)||(25021370-25021411)
chr7 (239-280)||(26459445-26459486)
chr7 (239-280)||(39631844-39631885)
chr7 (239-280)||(42836036-42836077)
chr7 (239-279)||(39499755-39499795)
chr7 (239-272)||(24513797-24513830)
chr7 (239-280)||(30442488-30442529)
chr7 (239-279)||(26199509-26199549)
chr7 (238-278)||(35328911-35328951)
chr7 (238-278)||(43215183-43215223)
chr7 (239-278)||(25956329-25956368)
chr7 (238-273)||(41487361-41487396)
chr7 (238-280)||(23552117-23552159)
chr7 (238-272)||(30579334-30579368)
chr7 (239-281)||(33869479-33869521)
chr7 (242-272)||(45976966-45976996)
chr7 (239-280)||(17113795-17113836)
chr7 (239-272)||(18363696-18363729)
chr7 (237-273)||(17041054-17041090)
[»] chr3 (21 HSPs)
chr3 (239-279)||(16354928-16354968)
chr3 (238-276)||(27093400-27093438)
chr3 (236-280)||(8051211-8051255)
chr3 (238-274)||(26988995-26989031)
chr3 (239-281)||(14186648-14186690)
chr3 (238-273)||(10499151-10499186)
chr3 (239-278)||(11092206-11092245)
chr3 (239-278)||(37788502-37788541)
chr3 (238-273)||(46518627-46518662)
chr3 (239-273)||(203090-203124)
chr3 (239-273)||(4222141-4222175)
chr3 (238-280)||(9832496-9832538)
chr3 (239-273)||(24459990-24460024)
chr3 (239-273)||(31789012-31789046)
chr3 (242-280)||(53412948-53412986)
chr3 (239-272)||(8170672-8170705)
chr3 (242-271)||(10969938-10969967)
chr3 (239-267)||(8796140-8796168)
chr3 (238-278)||(26871541-26871581)
chr3 (237-273)||(30311304-30311340)
chr3 (237-273)||(36720379-36720415)
[»] scaffold0002 (1 HSPs)
scaffold0002 (242-280)||(95006-95044)
[»] chr6 (5 HSPs)
chr6 (238-280)||(12188338-12188380)
chr6 (238-280)||(33549103-33549145)
chr6 (238-278)||(22708-22748)
chr6 (232-276)||(13330080-13330124)
chr6 (236-276)||(15497076-15497116)
[»] chr4 (18 HSPs)
chr4 (239-280)||(37109386-37109427)
chr4 (238-273)||(27965552-27965587)
chr4 (242-281)||(33438512-33438551)
chr4 (242-280)||(7292833-7292871)
chr4 (242-279)||(41683752-41683789)
chr4 (239-272)||(46545711-46545744)
chr4 (239-280)||(55427235-55427276)
chr4 (239-279)||(1730525-1730565)
chr4 (237-280)||(2185067-2185111)
chr4 (238-273)||(51250564-51250599)
chr4 (239-273)||(9241067-9241101)
chr4 (239-273)||(19238619-19238653)
chr4 (239-273)||(37443702-37443736)
chr4 (238-280)||(37720249-37720291)
chr4 (238-271)||(21434810-21434843)
chr4 (238-278)||(7949491-7949531)
chr4 (237-273)||(19680830-19680866)
chr4 (238-278)||(29195094-29195134)
[»] scaffold0118 (1 HSPs)
scaffold0118 (239-272)||(41676-41709)
[»] scaffold0180 (1 HSPs)
scaffold0180 (250-280)||(19997-20027)
[»] scaffold0258 (1 HSPs)
scaffold0258 (239-280)||(15358-15399)
[»] scaffold0070 (1 HSPs)
scaffold0070 (239-280)||(42555-42596)
[»] scaffold0032 (1 HSPs)
scaffold0032 (239-280)||(112282-112323)
[»] scaffold0172 (1 HSPs)
scaffold0172 (238-270)||(32814-32846)


Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 280
Target Start/End: Original strand, 5264314 - 5264585
Alignment:
Q  9 gactgatatgaaggataatgcaacagttgagtaaaagagctaccgtttcaaagtgaaaaatagagaatgtaacnnnnnnnnnnnnnnnntagagtgtgaa 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |                |||||||||||    
T  5264314 gactgaaatgaaggataatgcaacagttgagtaaaagagctaccgtttcaaagtgaaaaatagagaatgtagcaaaaaaaagtaaaaaatagagtgtgaa 5264413  T
Q  109 ggcagaacagtgttaacaatatagagaatcagagaataataaaggaggccagcgttttttagaagagcaaagcttcggaacacaaacattactctaagaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  5264414 ggcagaacagtgttaacaatatagagaatcagagaataataaaggaggccagcattttttagaaaagcaaagcttcggaacacaaacattactctaagaa 5264513  T
Q  209 tatatagtgaaatataaatacactaaactaaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5264514 tatatagtgaaatataaatacactaaactaaacccacttgggttggcctagtggtattggcttggaacctgg 5264585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 12988427 - 12988470
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgga 281  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  12988427 aaacccacttggattggcctagtggtattggcttggaacctgga 12988470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 16852338 - 16852381
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  16852338 taaacccacttgggttggcctagtggtattggcttgggacctgg 16852381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 19703566 - 19703523
Alignment:
Q  236 ctaaacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  19703566 ctaaacccacttgggttggcctagtggtattggcttgggacctg 19703523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 18540298 - 18540339
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgg 18540339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 23874458 - 23874417
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctgg 23874417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 280
Target Start/End: Original strand, 2203494 - 2203533
Alignment:
Q  241 cccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgg 2203533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 280
Target Start/End: Original strand, 3624582 - 3624621
Alignment:
Q  241 cccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgg 3624621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 272
Target Start/End: Complemental strand, 3826855 - 3826820
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttg 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  3826855 taaacccacttgggttggcctagtggtattggcttg 3826820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 20994534 - 20994493
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgg 20994493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 8794419 - 8794379
Alignment:
Q  241 cccacttgggttggcctagtggtattggcttggaacctgga 281  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  8794419 cccacttggattggcatagtggtattggcttggaacctgga 8794379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 44780191 - 44780156
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||||||||| ||||||||||    
T  44780191 aaacccacttgggttggcctagtggcattggcttgg 44780156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 30483960 - 30483926
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||| ||||||||||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgg 30483926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 33017214 - 33017256
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgga 281  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  33017214 aacccacttgggttggccttgtcatattggcttggaacctgga 33017256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 968362 - 968403
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||| |||||||| ||||||||||||||| ||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgg 968403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 8484998 - 8485039
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||||||||||||| |||||||| |||||| |||||    
T  8484998 aaacccacttgggttggcctggtggtatttgcttgggacctg 8485039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 11518953 - 11518916
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaac 276  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  11518953 aacccacttgggttagcctagtggtataggcttggaac 11518916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 18897164 - 18897205
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    ||||||||||||||||||||||||||| |||| |||| ||||    
T  18897164 taaacccacttgggttggcctagtggtgttggtttgggacct 18897205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 22269010 - 22268970
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||||||||||||| ||||| ||||||||| ||||    
T  22269010 aaacccacttgggttggcctggtggtgttggcttgggacct 22268970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 28566104 - 28566144
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||||||||| |||||||||||||| |||| ||||    
T  28566104 aaacccacttgggttgacctagtggtattggtttgggacct 28566144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 28573727 - 28573767
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||||||||| |||||||||||||| |||| ||||    
T  28573727 aaacccacttgggttgacctagtggtattggtttgggacct 28573767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 43236543 - 43236583
Alignment:
Q  198 tactctaagaatatatagtgaaatataaatacactaaacta 238  Q
    |||||| ||||| |||||||||||||||||| |||||||||    
T  43236543 tactctgagaatgtatagtgaaatataaatagactaaacta 43236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 36371469 - 36371511
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgg 36371511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 4566546 - 4566589
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  4566546 taaacccacttgggttggcctagtgatattggcttggaacctgg 4566589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 9165271 - 9165230
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgg 9165230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 33700847 - 33700808
Alignment:
Q  241 cccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgg 33700808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 31794340 - 31794306
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||||||||||||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgg 31794306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 17745328 - 17745292
Alignment:
Q  243 cacttgggttggcctagtggtattggcttggaacctg 279  Q
    ||||||||||||||||||||||||||||||| |||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctg 17745292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 21547558 - 21547522
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||| ||||||||||||||||||||||||||||||    
T  21547558 taaaccgacttgggttggcctagtggtattggcttgg 21547522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 272
Target Start/End: Original strand, 40257397 - 40257432
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttg 272  Q
    ||||||||||||||||||||| ||||||||||||||    
T  40257397 taaacccacttgggttggcctggtggtattggcttg 40257432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 19528403 - 19528369
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||| |||||||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgg 19528369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 50901581 - 50901623
Alignment:
Q  239 aacccacttgggttggcctagtggt-attggcttggaacctgg 280  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctgg 50901623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 51703779 - 51703820
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||| ||||||||| |||||||||||||||||||| ||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgg 51703820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 2219972 - 2220012
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||||||||  || |||||||||||||||||||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctg 2220012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 8904412 - 8904448
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||||||||| |||||| |||||    
T  8904412 taaacccacttgggttggcctagtagtattgacttgg 8904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 39012290 - 39012330
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||| ||||||||||||||| ||||||||| ||||    
T  39012290 aaacccactttggttggcctagtggtgttggcttgggacct 39012330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 7918545 - 7918504
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgg 7918504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 34984805 - 34984847
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgg 34984847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 21549213 - 21549172
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgg 21549172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 25627057 - 25627094
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaac 276  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaac 25627094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 30883276 - 30883233
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  30883276 taaacccacttgggttggtctagtggtattggcttgggacctgg 30883233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 14285160 - 14285202
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  14285160 aaacccacttgggttggccgagtggaattggcttggaacctgg 14285202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 21589288 - 21589329
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgg 21589329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 16436616 - 16436652
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16436616 taaactcacttgggttggcctagtggtattggcttgg 16436652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 87501 - 87458
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||    
T  87501 taaacccacttcggttggcctagtggtattgccttggaatctgg 87458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 892550 - 892511
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  892550 aacccatttgggttggcctagtggtattggcttgggacct 892511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 22737081 - 22737116
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22737081 aaacccacttgggttggtctagtggtattggcttgg 22737116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 26078128 - 26078093
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||||||||||||||| ||||    
T  26078128 aaacccacttgggttggcctagtggtattggtttgg 26078093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 26598523 - 26598558
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||| |||||||||||||||||||||||    
T  26598523 aaacccacttggattggcctagtggtattggcttgg 26598558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 5390926 - 5390892
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||| ||||||||||||||||||||||||||||    
T  5390926 aacccatttgggttggcctagtggtattggcttgg 5390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 29075781 - 29075815
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||| ||||||||||||||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgg 29075815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 3252365 - 3252332
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttg 272  Q
    ||||||||||||||||||||||||||||| ||||    
T  3252365 aacccacttgggttggcctagtggtattgacttg 3252332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 19043458 - 19043495
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaac 276  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  19043458 aacccacttgggttggcctagtgctattgacttggaac 19043495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 3915074 - 3915034
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  3915074 aacctacttgggttggcctggtggtattagcttggaacctg 3915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 43241764 - 43241724
Alignment:
Q  233 aaactaaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||| |||||||||||| |||||||||||| |||||    
T  43241764 aaactaaactcacttgggttggtctagtggtattgacttgg 43241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 42922414 - 42922455
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgg 42922455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 42602552 - 42602595
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  42602552 taaacccacttgggttggcctagtggtattggcttgggacctgg 42602595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 40416466 - 40416425
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgg 40416425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 42327471 - 42327430
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgg 42327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 29503269 - 29503312
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  29503269 taaacccacttgggttggcctagtggtattggtttgggacctgg 29503312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 4060292 - 4060250
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  4060292 taaacccacttgggttggcctagtggtattggtttgaaacctg 4060250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 11062360 - 11062397
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaac 276  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaac 11062397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 37480074 - 37480115
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctg 37480115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 1729814 - 1729850
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||| ||||||||||||||||||    
T  1729814 taaacccacttgggttgggctagtggtattggcttgg 1729850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 16381730 - 16381696
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||||||||||| |||||||    
T  16381730 aacccacttgggttggcctagtggtataggcttgg 16381696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 34041666 - 34041636
Alignment:
Q  237 taaacccacttgggttggcctagtggtattg 267  Q
    |||||||||||||||||||||||||||||||    
T  34041666 taaacccacttgggttggcctagtggtattg 34041636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 9318150 - 9318121
Alignment:
Q  239 aacccacttgggttggcctagtggtattgg 268  Q
    ||||||||||||||||||||||||||||||    
T  9318150 aacccacttgggttggcctagtggtattgg 9318121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 16918653 - 16918620
Alignment:
Q  240 acccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||||||||||||| ||||    
T  16918653 acccacttgggttggcctagtggtattggtttgg 16918620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 37756046 - 37756006
Alignment:
Q  240 acccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||| | ||||||||||||||| ||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgg 37756006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 45559195 - 45559239
Alignment:
Q  234 aactaaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  45559195 aacttaacccacttgggttggcctagtggtattggcttggaacct 45559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 25021411 - 25021370
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgg 25021370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 26459486 - 26459445
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgg 26459445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 39631844 - 39631885
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgg 39631885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 42836077 - 42836036
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgg 42836036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 39499795 - 39499755
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctg 39499755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 24513797 - 24513830
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttg 272  Q
    ||||||||||||||||||||||||||||||||||    
T  24513797 aacccacttgggttggcctagtggtattggcttg 24513830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 30442488 - 30442529
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgg 30442529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 26199509 - 26199549
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  26199509 aacccacttgagttggcctagtggtattggcttgggacctg 26199549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 35328951 - 35328911
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  35328951 aaacccacttgggttggcctggtggtgttggcttggaacct 35328911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 43215183 - 43215223
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacct 43215223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 25956368 - 25956329
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggacct 25956329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 41487361 - 41487396
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||||| |||||||||||||||    
T  41487361 aaacccacttgggttggcctggtggtattggcttgg 41487396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 23552117 - 23552159
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgg 23552159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 272
Target Start/End: Original strand, 30579334 - 30579368
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttg 272  Q
    |||||||||||||||||||| ||||||||||||||    
T  30579334 aaacccacttgggttggcctggtggtattggcttg 30579368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 33869521 - 33869479
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgga 281  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  33869521 aacccacttgggttggcctagtagtattggcttgagacctgga 33869479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 45976996 - 45976966
Alignment:
Q  242 ccacttgggttggcctagtggtattggcttg 272  Q
    |||||||||||||||||||||||||||||||    
T  45976996 ccacttgggttggcctagtggtattggcttg 45976966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 17113795 - 17113836
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||| ||||||||| |||||||||| ||||||||    
T  17113795 aacccacttggggtggcctagttgtattggcttagaacctgg 17113836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 18363696 - 18363729
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttg 272  Q
    ||||||||||||||||||||||||||| ||||||    
T  18363696 aacccacttgggttggcctagtggtataggcttg 18363729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 17041090 - 17041054
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  17041090 taaacccacttgggttggtctagtggcattggcttgg 17041054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 16354968 - 16354928
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctg 16354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 27093438 - 27093400
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaac 276  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27093438 aaacccacttgggttggcctagtggtattggcttggaac 27093400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 8051211 - 8051255
Alignment:
Q  236 ctaaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  8051211 ctaaacccacttgggttggcctggtggtattggcttgggacctgg 8051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 26988995 - 26989031
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgga 274  Q
    |||||||||||||||||||||||||||||||||||||    
T  26988995 aaacccacttgggttggcctagtggtattggcttgga 26989031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 14186648 - 14186690
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgga 281  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctgga 14186690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 10499186 - 10499151
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||||| |||||||||||||||    
T  10499186 aaacccacttgggttggcctggtggtattggcttgg 10499151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 11092245 - 11092206
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacct 278  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  11092245 aacccacttgggttggcctagtggtgttggcttgggacct 11092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 37788541 - 37788502
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacct 37788502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 46518627 - 46518662
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||| |||||||||||||||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgg 46518662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 203090 - 203124
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||||||||||||| |||||    
T  203090 aacccacttgggttggcctagtggtattgacttgg 203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 4222141 - 4222175
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||| |||||||||||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgg 4222175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 9832496 - 9832538
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||  ||||||||||||||| ||||||    
T  9832496 aaacccacttgggttggcccggtggtattggcttgggacctgg 9832538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 24459990 - 24460024
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||| |||||||||||||||    
T  24459990 aacccacttgggttggcctggtggtattggcttgg 24460024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 31789046 - 31789012
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||||||| |||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgg 31789012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 53412948 - 53412986
Alignment:
Q  242 ccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgg 53412986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 8170672 - 8170705
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttg 272  Q
    |||||| |||||||||||||||||||||||||||    
T  8170672 aacccatttgggttggcctagtggtattggcttg 8170705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 271
Target Start/End: Complemental strand, 10969967 - 10969938
Alignment:
Q  242 ccacttgggttggcctagtggtattggctt 271  Q
    ||||||||||||||||||||||||||||||    
T  10969967 ccacttgggttggcctagtggtattggctt 10969938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 267
Target Start/End: Complemental strand, 8796168 - 8796140
Alignment:
Q  239 aacccacttgggttggcctagtggtattg 267  Q
    |||||||||||||||||||||||||||||    
T  8796168 aacccacttgggttggcctagtggtattg 8796140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 26871581 - 26871541
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||||||||||||| ||||| ||||||||| ||||    
T  26871581 aaacccacttgggttggcctggtggtgttggcttgggacct 26871541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 30311304 - 30311340
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  30311304 taaacccacctgggttggcctagtggtataggcttgg 30311340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 36720379 - 36720415
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||| || |||||||||||||||    
T  36720379 taaacccacttgggttggtctggtggtattggcttgg 36720415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 95044 - 95006
Alignment:
Q  242 ccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||||||||||||||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgg 95006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 12188380 - 12188338
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgg 12188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 33549103 - 33549145
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||| || ||||||||||||||| ||||||    
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgg 33549145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 22748 - 22708
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    ||||||||||||||||| |||||||| ||||||||| ||||    
T  22748 aaacccacttgggttgggctagtggttttggcttgggacct 22708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 13330080 - 13330124
Alignment:
Q  232 taaactaaacccacttgggttggcctagtggtattggcttggaac 276  Q
    |||| ||||||||||||||||| ||||||||||||| ||| ||||    
T  13330080 taaagtaaacccacttgggttgacctagtggtattgactttgaac 13330124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 15497116 - 15497076
Alignment:
Q  236 ctaaacccacttgggttggcctagtggtattggcttggaac 276  Q
    ||||||||||||||||||||||| || |||||| |||||||    
T  15497116 ctaaacccacttgggttggcctaatgatattggtttggaac 15497076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 37109427 - 37109386
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgg 37109386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 27965587 - 27965552
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||||||||||||||||||||    
T  27965587 aaacccacttgggttggcctagtggtattggcttgg 27965552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 281
Target Start/End: Complemental strand, 33438551 - 33438512
Alignment:
Q  242 ccacttgggttggcctagtggtattggcttggaacctgga 281  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  33438551 ccacttgggttggtctagtggtattggcttggaacctgga 33438512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 7292871 - 7292833
Alignment:
Q  242 ccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgg 7292833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 41683752 - 41683789
Alignment:
Q  242 ccacttgggttggcctagtggtattggcttggaacctg 279  Q
    |||||||||||| |||||||||||||||||||||||||    
T  41683752 ccacttgggttgacctagtggtattggcttggaacctg 41683789  T

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Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 46545711 - 46545744
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttg 272  Q
    ||||||||||||||||||||||||||||||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttg 46545744  T

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Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 55427276 - 55427235
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgg 55427235  T

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Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 1730565 - 1730525
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctg 279  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctg 1730525  T

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Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 2185111 - 2185067
Alignment:
Q  237 taaacccactt-gggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||    
T  2185111 taaacccacttcgggttggcctagtggtaatggcttggaacctgg 2185067  T

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Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 51250599 - 51250564
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttgg 273  Q
    |||||||||||||||||||| |||||||||||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgg 51250564  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 9241101 - 9241067
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||| |||||||||||||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgg 9241067  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 19238653 - 19238619
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||||||| |||||||||||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgg 19238619  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 37443702 - 37443736
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||||| |||||||||||||||||||    
T  37443702 aacccacttgggttgacctagtggtattggcttgg 37443736  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 37720291 - 37720249
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||    
T  37720291 aaacccacttgggttggcctggtgttattggcttgggacctgg 37720249  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 21434810 - 21434843
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggctt 271  Q
    ||||||| ||||||||||||||||||||||||||    
T  21434810 aaacccatttgggttggcctagtggtattggctt 21434843  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 7949531 - 7949491
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    ||||||||||||| |||||||| ||||||||||||| ||||    
T  7949531 aaacccacttgggctggcctagcggtattggcttgggacct 7949491  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 19680866 - 19680830
Alignment:
Q  237 taaacccacttgggttggcctagtggtattggcttgg 273  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  19680866 taaacccacttggattggcctagtggtattcgcttgg 19680830  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 29195094 - 29195134
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggcttggaacct 278  Q
    |||||||||||||||||||| ||||| ||||||||| ||||    
T  29195094 aaacccacttgggttggcctggtggtgttggcttgggacct 29195134  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 41709 - 41676
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttg 272  Q
    ||||||||||||||||||||||||||||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttg 41676  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 280
Target Start/End: Complemental strand, 20027 - 19997
Alignment:
Q  250 gttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||||||||||||||||||    
T  20027 gttggcctagtggtattggcttggaacctgg 19997  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 15399 - 15358
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||||||||||||| || ||||||||||||||| ||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgg 15358  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 42596 - 42555
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    |||||| |||||||||||||||||||||| ||||||| ||||    
T  42596 aacccagttgggttggcctagtggtattgacttggaatctgg 42555  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 112282 - 112323
Alignment:
Q  239 aacccacttgggttggcctagtggtattggcttggaacctgg 280  Q
    ||||||||||||||||||| || |||||||||||||| ||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgg 112323  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 32846 - 32814
Alignment:
Q  238 aaacccacttgggttggcctagtggtattggct 270  Q
    |||||||||||||||||||| ||||||||||||    
T  32846 aaacccacttgggttggcctggtggtattggct 32814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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