View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2853_high_10 (Length: 250)
Name: NF2853_high_10
Description: NF2853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2853_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 44688110 - 44687875
Alignment:
| Q |
1 |
tactataaaacaaacgagatattttaaaacaaacttcaaattggaagtgtaccagcacttgtattggtcaaattttaatgcaaaattaagatatttactt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44688110 |
tactataaaacaaacgagatattttaaaacaaacttcaaattggaagtgtaccagcacttgtattggtcaaattttaatgcaaaattaagatatttactt |
44688011 |
T |
|
| Q |
101 |
cacttatcctaggttatcctaggtattgtagtttttgcgggtataaatcctttgcccattttgatcattccttacgagctctgcctcatagacacgtttg |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
44688010 |
cacttatcctaggttatcctaggtattgtagtttttgcgggtataaatcctttgcccattttgatcattcctttcgagctctgcctcatagacacgtttg |
44687911 |
T |
|
| Q |
201 |
acattattggatggattagtgggcccatgccatgcc |
236 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| |
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| T |
44687910 |
acattattggatggattagtgggcccatgccatgcc |
44687875 |
T |
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