View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2853_high_5 (Length: 302)
Name: NF2853_high_5
Description: NF2853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2853_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 76 - 286
Target Start/End: Original strand, 44688479 - 44688689
Alignment:
| Q |
76 |
ctacctttaagacgtgtgagtccaactactaacnnnnnnnnttaaaatagtcgtatcaaccattaagttaagattagatggttgggattgaaaactacat |
175 |
Q |
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| T |
44688479 |
ctacttttaagatgtgtgaatccaactactaacaaaaaaaattaaaatagtcgtaccaaccattaagttaagattagatggttgggattgaaaactacat |
44688578 |
T |
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| Q |
176 |
gacttaaattatgcaccaaatccaaatagagtgggaggaggtatccattaattctctcatatgtcttaatcatgaaatttgtattttcatgatctaatgc |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44688579 |
gacttaaattatgcaccaaatccaaatagagtgggaggaggtatccattaattctctcatatgtcttaatcatgaaatttgtattttcatgatctaatgc |
44688678 |
T |
|
| Q |
276 |
cgccatatata |
286 |
Q |
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| T |
44688679 |
cgccatatata |
44688689 |
T |
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