View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2853_low_2 (Length: 497)
Name: NF2853_low_2
Description: NF2853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2853_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 489; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 1 - 493
Target Start/End: Original strand, 13860246 - 13860738
Alignment:
| Q |
1 |
aatactatttgaagataattaccattgttagatgatatattatgcaccaattcagctgctcaaacctgaaattccatcaatagaatctaccaaccaactt |
100 |
Q |
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| T |
13860246 |
aatactatttgaagataattaccattgttagatgatatattatgcaccaattcagctgctcaaacctgaaattccatcaatagaatctaccaaccaactt |
13860345 |
T |
|
| Q |
101 |
gaaatattcaatcttcaagcttttttctgactcaatcaacctccaagcttaaataatgttgcaatgagtaattttcttgctgatgataacttctcaatat |
200 |
Q |
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| T |
13860346 |
gaaatattcaatcttcaagcttttttctgactcaatcaacctccaagcttaaataatgttgcaatgagtaattttcttgctgatgataacttctcaatat |
13860445 |
T |
|
| Q |
201 |
cttaactaaaataaacttgccaataatgttggaaggtaaatgtgaaatatatacgaatagccgtgggaaaatgtcgttgcagaagaggcttcgcaatcac |
300 |
Q |
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| T |
13860446 |
cttaactaaaataaacttgccaataatgttggaaggtaaatgtgaaatatatacgaatagccgtgggaaaatgtcgttgcagaagaggcttcgcaatcac |
13860545 |
T |
|
| Q |
301 |
acaagaagaagaatttccaaccttatgctaacccctcctctgcaactatctcccctgaattatttccttctttatttgtttctaaggcagaataataatc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13860546 |
acaagaagaagaatttccaaccttatgctaacccctcctctgcaactatctcccctgaattatttccttctttatttgtttctaaggcagaataataatc |
13860645 |
T |
|
| Q |
401 |
ttcttcttgtttttgtacgttccccaaaaatgtatgtgttataccataatgacatgatacgttattatcaacatggtcatgttcatctcactc |
493 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
13860646 |
ttcttcttgtttttgtacgttccccaaaaatgtatgtgttataccataatgacatgatacgttattatcaacatggtcatgttcatgtcactc |
13860738 |
T |
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