View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2854_low_3 (Length: 311)
Name: NF2854_low_3
Description: NF2854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2854_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 26994917 - 26995216
Alignment:
| Q |
18 |
atatatgcactgcattacatgcttgcaaggaatcaacagtagtacttgaaaagtcctttctttcggacctcttaagtatcttttatggaaacaatatttt |
117 |
Q |
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| T |
26994917 |
atatatgcactgcattacatgcttgcaaggaatcaacagtagtacttgaaaagtcctttctttcggacctcttaagtatcttttatggaaacaatatttt |
26995016 |
T |
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| Q |
118 |
tatcagaatggtgcaattgctgaagattgctctattttgagacactactaatgtaaagtattttatactattggcacatcataaaaaatgttagtttcta |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26995017 |
tatcagaatggtgcaattgctgaagattgctctattttgagacaccactaatgtaaagtattttatactattggcacatcataaaaaatgttagtttcta |
26995116 |
T |
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| Q |
218 |
agaagtgcttgtgagatagtcaaccttgtttaatc------------caacctaagttaaattttcaaagatgttatccatatatatatgctgatgatgt |
305 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
26995117 |
agaagtgcttgtgagatagtcaaccttgtttaatccattattgaaggcaacctaagttaaattttcaaagatgttatccatatatatatgcttatgatgt |
26995216 |
T |
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