View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2856-Insertion-10 (Length: 683)
Name: NF2856-Insertion-10
Description: NF2856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2856-Insertion-10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 672; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 672; E-Value: 0
Query Start/End: Original strand, 8 - 683
Target Start/End: Original strand, 29728636 - 29729311
Alignment:
| Q |
8 |
ggttgattgcacatgtcaatgaataaaacatgcagcaaaattaaatatgattacctaacaaatattattactagtactcatgtaaccaaaggcaagatta |
107 |
Q |
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| T |
29728636 |
ggttgattgcacatgtcaatgaataaaacatgcagcaaaattaaatatgattacctaacaaatattattactagtactcatgtaaccaaaggcaagatta |
29728735 |
T |
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| Q |
108 |
ggccaaaatggatttgaaaatagaatgtttcttttatatagtaaacgtgaccatattgctctgcgagttgtagcatatgaaaacagtaacacttaattaa |
207 |
Q |
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| T |
29728736 |
ggccaaaatggatttgaaaatagaatgtttcttttatatagtaaacgtgaccatattgctctgcgagttgtagcatatgaaaacagtaacacttaattaa |
29728835 |
T |
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| Q |
208 |
aatcagaaaaatccactggcattttacctgactaatgcttttctggattttcttggctcccactggtacctggtctgttgacattttgctggttcattgc |
307 |
Q |
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| T |
29728836 |
aatcagaaaaatccactggcattttacctgactaatgcttttctggattttcttggctcccactggtacctggtctgttgacattttgctggttcattgc |
29728935 |
T |
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| Q |
308 |
ctgattccaaatttgcaaaggaacctcataaatgttaacatctttgtgccatatttaaaaagaagacaccactaaagtgataatattaagtatcaccagg |
407 |
Q |
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| T |
29728936 |
ctgattccaaatttgcaaaggaacctcataaatgttaacatctttgtgccatatttaaaaagaagacactactaaagtgataatattaagtatcaccagg |
29729035 |
T |
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| Q |
408 |
aaatgaccaaaatgtcacccaacttacataaagattctttttgtttatttgaccaaaatactagtacttttagaagagataacaattgcattaagggaag |
507 |
Q |
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| T |
29729036 |
aaatgaccaaaatgtcacccaacttacataaagattctttttgtttatttgaccaaaatactagtacttttagaagagataacaattgcattaagggaag |
29729135 |
T |
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| Q |
508 |
agttaggagaattttgaataaattttaaagttttttctatctctttataatattctcaaatccaagaaaatattactcatatgtattcatatattgtcct |
607 |
Q |
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| T |
29729136 |
agttaggagaattttgaataaattttaaagttttttctatctctttataatattctcaaatccaagaaaatattactcatatgtattcatatattgtcct |
29729235 |
T |
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| Q |
608 |
ctccataaccacttttctaaacaaggtgaaggattgcctcctttcccttcctccccacccctggaaagcccttccc |
683 |
Q |
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| T |
29729236 |
ctccataaccacttttctaaacaaggtgaaggattgcctcctttcccttcctccccacccctggaaagcccttccc |
29729311 |
T |
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Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 31235721 - 31235769
Alignment:
| Q |
8 |
ggttgattgcacatgtcaatgaataaaacatgcagcaaaattaaatatg |
56 |
Q |
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| T |
31235721 |
ggttgattgcacatgtcaatgaataaaacatacagcaaaattaagtatg |
31235769 |
T |
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