View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2856-Insertion-13 (Length: 569)
Name: NF2856-Insertion-13
Description: NF2856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2856-Insertion-13 |
 | |
|
| [»] chr8 (18 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 542; Significance: 0; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 542; E-Value: 0
Query Start/End: Original strand, 8 - 569
Target Start/End: Original strand, 6423696 - 6424257
Alignment:
| Q |
8 |
gttgattctataataccctcagcattgacaaggacattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacag |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6423696 |
gttgattctataataccctcagcattgacaaggacattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacag |
6423795 |
T |
|
| Q |
108 |
ggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaacaacagcatgagtgttcaacctgtcatacatgtagacattaataaacaactc |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6423796 |
ggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaacaacagcgtgagtgttcaacctgtcatacatgtagacattaataaacaactc |
6423895 |
T |
|
| Q |
208 |
acagatagataaattatatctgtttctataaatctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacata |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6423896 |
acagatagataaattatatctgtttctataaatctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacata |
6423995 |
T |
|
| Q |
308 |
agctttagcaagtagccaaatagaagcttcaacaccttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgtggctta |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6423996 |
agctttagcaagtagccaaatagaagcttcaacaccttcacttgcagggaagtaaacttcactaacaggtccataactatcatcgtcaggatgtggctta |
6424095 |
T |
|
| Q |
408 |
cttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcctttgtctcagttgcatttattttcctca |
507 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6424096 |
cttagctcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcctttgtctcagttgcatttattttcctca |
6424195 |
T |
|
| Q |
508 |
aatatggatatactatgtcatagtgatcaaggatgtacagtttgtggttttggatagcctaa |
569 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
6424196 |
aatatggatatactatgtcatagtgatcaaggatgtacaatttgttgttttggatagcctaa |
6424257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 515
Target Start/End: Original strand, 6351852 - 6352359
Alignment:
| Q |
8 |
gttgattctataataccctcagcattgacaaggacattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacag |
107 |
Q |
| |
|
|||||||||||||||||||| |||||||| | |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| || | || |
|
|
| T |
6351852 |
gttgattctataataccctctgcattgaccaagacatttcgtgcaagtgcatttatgttcattgtgtcacggtagtgaggaagtaaaagtttatgaatag |
6351951 |
T |
|
| Q |
108 |
ggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaacaacagcatgagtgttcaacctgtcatacatgtagacattaataaacaactc |
207 |
Q |
| |
|
|||||||| |||||| || |||||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| || ||| || || | || |
|
|
| T |
6351952 |
ggtgaaccacactaagatgcctgtttgttgctatgatgaatggctcaacaacagcgtgggtgttcaacctgtcacacatgtcgatattcatgaattaatc |
6352051 |
T |
|
| Q |
208 |
acagatagataaattatatctgtttctataaatctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacata |
307 |
Q |
| |
|
| |||||| | |||||| | || || | || | | ||| | || |||||||||||||||| |||||||| |||| ||| |||||||||||||| ||| | |
|
|
| T |
6352052 |
atagataggttaattatgtttgattgtgtatacgtgattaatgagattcataccaatggctgacaagttgatgatagcaggagtcatttacaacaacaaa |
6352151 |
T |
|
| Q |
308 |
agctttagcaagtagccaaatagaagcttcaacaccttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgtggctta |
407 |
Q |
| |
|
||| || ||||| |||||||| ||||||||||||||||||||||| || |||||||| | |||| ||| ||| |||||||| | | ||| |||||| | |
|
|
| T |
6352152 |
agccttggcaaggagccaaattgaagcttcaacaccttcacttgcgggcaagtaaacattgctaacaggaccaaaactatcaccttgagggtgtggcctg |
6352251 |
T |
|
| Q |
408 |
cttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcctttgtctcagttgcatttattttcctca |
507 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| |||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6352252 |
cttagttcaatggccagtggcttcaaagttccatcatcttgcaagaaaagtatggttctggtagcataggcctttgtctcggttgcatttattttcctca |
6352351 |
T |
|
| Q |
508 |
aatatgga |
515 |
Q |
| |
|
|||||||| |
|
|
| T |
6352352 |
aatatgga |
6352359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 568
Target Start/End: Original strand, 6331496 - 6332059
Alignment:
| Q |
11 |
gattctataataccctcagcattgacaaggacattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggt |
110 |
Q |
| |
|
||||||||||||||||| ||||| || | |||||||| |||||||| ||| ||||||||||||||||| || || ||||||| ||||||||| | ||||| |
|
|
| T |
6331496 |
gattctataataccctctgcattaaccaagacattccttgcaagtgcattaatgttcattgtgtcacgataatgtggaagtagaagtttgtgaatagggt |
6331595 |
T |
|
| Q |
111 |
gaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaacaacagcatgagtgttcaacctgtcatacatgtagacattaataaacaactcaca |
210 |
Q |
| |
|
||||| |||||| || || ||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| |||||| || ||||| | |
|
|
| T |
6331596 |
gaaccacactaagatgcctatttgttgctatgatgaatggctcaacaacagcatgagtgttcaacctgttacacatgtagatattaatgaattactcata |
6331695 |
T |
|
| Q |
211 |
gatagat-aaattatatctgttt----ctataaat-ctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactac |
304 |
Q |
| |
|
||| ||| |||||| || |||| ||| ||| ||||| || ||||| ||||| ||||| |||||||| ||| || |||||||||||||| || |
|
|
| T |
6331696 |
gattgatgaaattaaatacgtttgattctagaaaaactcatcaacataattcgtaccagtggctgacaagttgatgaaaacaggagtcatttacaacaac |
6331795 |
T |
|
| Q |
305 |
ataagctttagcaagtagccaaatagaagcttcaacaccttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgtggc |
404 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| ||||||||||| || | |||||||||| |
|
|
| T |
6331796 |
gtaagctttggcaagtagccaaatagaagcttcaacaccttcacttgcaggcaagtaaacattactaacaggaccataactatcttcttgaggatgtggc |
6331895 |
T |
|
| Q |
405 |
ttacttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcctttgtctcagttgcatttattttcc |
504 |
Q |
| |
|
|||||||| ||||| |||| |||||| ||||||||||||||||| ||||||| || |||||| | |||||| |||||||| ||||||| |||||||||| |
|
|
| T |
6331896 |
ttacttagctcaatggccaatggcttcaaagttccatcattttgtaagaaaatgaaggttctcgtagcatatgcctttgtatcagttgagtttattttcc |
6331995 |
T |
|
| Q |
505 |
tcaaatatggatatactatgtcatagtgatcaaggatgtacagtttgtggttttggatagccta |
568 |
Q |
| |
|
||||||||||| ||| | ||||| ||||||||| ||||| || ||| ||||||||||||||| |
|
|
| T |
6331996 |
tcaaatatggaaatattgggtcatggtgatcaagtatgtaaagcctgttgttttggatagccta |
6332059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 7 - 515
Target Start/End: Original strand, 6362784 - 6363298
Alignment:
| Q |
7 |
agttgattctataataccctcagcattgacaaggacattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggaca |
106 |
Q |
| |
|
|||||| || ||||||||||| |||||||| | ||||| ||||| |||| |||||||||||| |||||||| || || ||||| | |||||| || | | |
|
|
| T |
6362784 |
agttgactcgataataccctcggcattgaccaacacatttcgtgctagtgcatttatgttcatcgtgtcacgataatgtggaagcagaagtttatgaata |
6362883 |
T |
|
| Q |
107 |
gggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaacaacagcatgagtgttcaacctgtcatacat-gtagaca----ttaat-aa |
200 |
Q |
| |
|
||||||||| ||| || || || ||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||| ||||| | || || || |
|
|
| T |
6362884 |
gggtgaaccacacttagatgcctatttgttgctatgacgaatggctcaactacagcatgagtgttcaacctgtcacacattgtagataaattttcatcaa |
6362983 |
T |
|
| Q |
201 |
acaactcacagatagataaattatatctgtttctataaatctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaa |
300 |
Q |
| |
|
| ||||| |||| ||||| | ||| || || | ||||| |||| ||||||||||||||||||||||||||||||||||| || || |||||||||| |
|
|
| T |
6362984 |
attactcatagatgtataaaatttatttgattgtttaaatatcataaacgaaattcataccaatggctaacaagttggtgataacatgaatcatttacaa |
6363083 |
T |
|
| Q |
301 |
ctacataagctttagcaagtagccaaatagaagcttcaacaccttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatg |
400 |
Q |
| |
|
||| ||||| || ||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||| ||| ||| |||||||| | | ||| || |
|
|
| T |
6363084 |
ttacgtaagccttggcaaggagccaaattgaagcttcaacaccttcacttgcaggcaagtaaactttgctaacaggaccaaaactatcaccttgagggtg |
6363183 |
T |
|
| Q |
401 |
tggcttacttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcctttgtctcagttgcatttatt |
500 |
Q |
| |
|
|||| ||||||||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||||| |||||||||||| ||||| |||||||||||| |
|
|
| T |
6363184 |
tggcctacttagttcaatggccaatggcttcaaagttccatcatcttgcaagaaaagaatggttctagtagcataggccttagtctcggttgcatttatt |
6363283 |
T |
|
| Q |
501 |
ttcctcaaatatgga |
515 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
6363284 |
ttcctcaaatatgga |
6363298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 17 - 568
Target Start/End: Original strand, 6274123 - 6274675
Alignment:
| Q |
17 |
ataataccctcagcattgacaaggacattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggtgaaccg |
116 |
Q |
| |
|
|||| |||||| |||||||| | ||||||| |||||||| ||| ||||||||||||||||| ||||| ||||||||||| || || | ||| |||||| |
|
|
| T |
6274123 |
ataacaccctctgcattgaccaaaacattccttgcaagtgcattaatgttcattgtgtcacgatagtgcggaagtaaaagcttatgaataggatgaacca |
6274222 |
T |
|
| Q |
117 |
tactaaggtgtctgtttgttgctatgatgaacggctcaacaacagcatgagtgttcaacctgtcatacatgtagacattaataaacaactcacagataga |
216 |
Q |
| |
|
|||||| || || ||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||| |||||| | |||||| ||||| | |
|
|
| T |
6274223 |
cactaagatgcctatttgttgctatgatgaatggctcaacaacagcatgagtgtttaacctgtcagacatatagatattaatgtataactcatagatata |
6274322 |
T |
|
| Q |
217 |
taaattatatctgtttctata-aatctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttag |
315 |
Q |
| |
|
|||| || | || ||| || ||||| | | |||| |||||||||||| | |||||||||||||||||||| |||||||| || || || || | |
|
|
| T |
6274323 |
taaagcatgtttgactctctataatcttttcaattgaatttataccaatggctgatgagttggtgatggcaagagtcgtttacaacaacgtatgccttgg |
6274422 |
T |
|
| Q |
316 |
caagtagccaaatagaagcttcaacaccttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgtggcttacttagttc |
415 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||| | |||||| | | ||||||||| ||||||| || |
|
|
| T |
6274423 |
caaggagccaaatagaagcttcaacaccttcacttgcaggcaagtaaatatcactaacaggaccaaagctatcagcctgaggatgtgggctacttagctc |
6274522 |
T |
|
| Q |
416 |
aatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcctttgtctcagttgcatttattttcctcaaatatgga |
515 |
Q |
| |
|
||| |||| ||||| ||||||||||||||||| |||||||||| |||||| | |||||| |||||||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
6274523 |
aatggccaacggcttcaaagttccatcattttgtaagaaaaggaaggttctcgtagcatatgcctttgtatcagctgcatttattttcctcagatatgga |
6274622 |
T |
|
| Q |
516 |
tatactatgtcatagtgatcaaggatgtacagtttgtggttttggatagccta |
568 |
Q |
| |
|
|||| ||| | || |||||| ||||||| ||||| | ||||||||||||| |
|
|
| T |
6274623 |
tataacgagtcgtggtaatcaagtatgtacaatttgttggtttggatagccta |
6274675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 250 - 567
Target Start/End: Original strand, 7458929 - 7459246
Alignment:
| Q |
250 |
gaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttcaacaccttcact |
349 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | ||| |||||||||||||| |||||||| || ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
7458929 |
gaaattcataccaatggctgacaagttggtggtagcatgagtcatttacaacgacataagccttggcaaggagccaaattgaagcttcaacaccttcact |
7459028 |
T |
|
| Q |
350 |
tgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgtggcttacttagttcaatcgccagtggctttaaagttccatcattttgc |
449 |
Q |
| |
|
|||||| |||||||| | ||||| ||| || |||||||| | | ||| |||||| ||||||||||||| |||| |||||| |||||||||||||||||| |
|
|
| T |
7459029 |
tgcaggcaagtaaacattactaacaggacctaaactatcaccttgagggtgtggcctacttagttcaatggccaatggcttcaaagttccatcattttgc |
7459128 |
T |
|
| Q |
450 |
aagaaaaggatggttctagcagcataggcctttgtctcagttgcatttattttcctcaaatatggatatactatgtcatagtgatcaaggatgtacagtt |
549 |
Q |
| |
|
|||||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| || || || | ||||||||| ||||||| || |
|
|
| T |
7459129 |
aagaaaagaatggttctagttgcataggactttgtctcagttgcatttattctcctcaaatatggaattagtagatcgtggtgatcaagtatgtacaatt |
7459228 |
T |
|
| Q |
550 |
tgtggttttggatagcct |
567 |
Q |
| |
|
| | |||||||||||||| |
|
|
| T |
7459229 |
tattgttttggatagcct |
7459246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 8 - 568
Target Start/End: Original strand, 6320986 - 6321554
Alignment:
| Q |
8 |
gttgattctataataccctcagcattgacaaggacattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacag |
107 |
Q |
| |
|
|||||||||||||||||||| ||||| || | |||| ||| |||||||| ||| ||||||||||||||||| || || ||||| | ||||||||| | || |
|
|
| T |
6320986 |
gttgattctataataccctctgcatttaccaagacactccttgcaagtgcattaatgttcattgtgtcacgataatgtggaagcagaagtttgtgaatag |
6321085 |
T |
|
| Q |
108 |
ggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaacaacagcatgagtgttcaacctgtcatacatgtagacattaataaacaactc |
207 |
Q |
| |
|
|||||||| |||||| || || || |||||||||||||| |||||||||||||| || ||||||||||||| | ||||||||| ||| || || | || |
|
|
| T |
6321086 |
ggtgaaccacactaagatgcctattagttgctatgatgaatggctcaacaacagcgtgcgtgttcaacctgttacacatgtagatattcatgaatcaatc |
6321185 |
T |
|
| Q |
208 |
acagatagataaa-ttatatctgttt----ctataaatct-catttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaac |
301 |
Q |
| |
|
||||| ||||| ||| || ||||| ||||||| | ||| || |||| ||||| ||||| |||||||||||| ||||||||||||||| |
|
|
| T |
6321186 |
ttagatatataaaattaaatatgtttgattctataaaaattcatcaacataattg-taccagtggctgacaagttggtgaacagaagagtcatttacaat |
6321284 |
T |
|
| Q |
302 |
tacataagctttagcaagtagccaaatagaagcttcaacaccttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgt |
401 |
Q |
| |
|
|||||||| || ||||| ||||||||||||| |||||||||||| ||||||| |||||||| ||||||| ||| ||| | |||||| | | ||||||| |
|
|
| T |
6321285 |
aacataagccttggcaaggagccaaatagaagattcaacaccttcctttgcaggcaagtaaacatcactaacaggaccaaagctatcagcctgaggatgt |
6321384 |
T |
|
| Q |
402 |
ggcttacttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcct---ttgtctcagttgcattta |
498 |
Q |
| |
|
|| ||||||| ||||| || | |||||| ||||||||||||||||| ||||||| ||| ||||||| |||||| |||| |||| |||| |||||||| |
|
|
| T |
6321385 |
gggctacttagctcaatggctaatggcttcaaagttccatcattttgtaagaaaatgatagttctagtagcatatgcctttgttgtatcagctgcattta |
6321484 |
T |
|
| Q |
499 |
ttttcctcaaatatggatatactatgtcatagtgatcaaggatgtacagtttgtggttttggatagccta |
568 |
Q |
| |
|
||||||||| ||||||||||| | ||||| ||||||||| ||||| || ||| ||||||||||||||| |
|
|
| T |
6321485 |
ttttcctcagatatggatatattgagtcatggtgatcaagtatgtaaagcctgttgttttggatagccta |
6321554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 47 - 443
Target Start/End: Original strand, 7471116 - 7471520
Alignment:
| Q |
47 |
cgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggtgaaccgtactaaggtgtctgtttgttgctatgatga |
146 |
Q |
| |
|
||||| || ||||||| |||||||||||||| |||||| |||||||||||||| || | | |||||||| |||||| || || |||||||||||||||| |
|
|
| T |
7471116 |
cgtgcgagggaatttaagttcattgtgtcacagtagtgtggaagtaaaagtttatgaatatggtgaaccacactaagatgcctatttgttgctatgatga |
7471215 |
T |
|
| Q |
147 |
acggctcaacaacagcatgagtgttcaacctgtcatacatgtagacat----taat-aaacaactcacagatagataaattata---tctgtttctataa |
238 |
Q |
| |
|
| ||||||||||| || |||||||||||||||||| |||| ||| || | || ||| ||||| |||||||| || | || | || || ||||| |
|
|
| T |
7471216 |
atggctcaacaacggcgtgagtgttcaacctgtcacacattgagatatatgttcatgaaattactcatagatagatcaaatttagtgtttgattgtataa |
7471315 |
T |
|
| Q |
239 |
atctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttca |
338 |
Q |
| |
|
| || ||| | ||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||| || ||||| |||||||| |||||||| |
|
|
| T |
7471316 |
acctgattaatgaaattcataccaatggctgacaagttggtgatagcatgagtcatttacaacaacataagccttggcaaggagccaaattgaagcttcc |
7471415 |
T |
|
| Q |
339 |
acaccttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgtggcttacttagttcaatcgccagtggctttaaagttc |
438 |
Q |
| |
|
|| ||||||||||| || |||||||| | ||||| ||| ||| |||||||| | | ||| |||||| ||||||||||||| |||| |||||| ||||||| |
|
|
| T |
7471416 |
acgccttcacttgcgggcaagtaaacattactaacaggaccaaaactatcaccttgagggtgtggcctacttagttcaatggccaatggcttcaaagttc |
7471515 |
T |
|
| Q |
439 |
catca |
443 |
Q |
| |
|
||||| |
|
|
| T |
7471516 |
catca |
7471520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 41 - 475
Target Start/End: Original strand, 6288397 - 6288828
Alignment:
| Q |
41 |
acattccgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggtgaaccgtactaaggtgtctgtttgttgcta |
140 |
Q |
| |
|
||||||| |||||||| ||| ||||||||||||||||| ||||| ||||||||||| || || | ||| |||||| |||||| || || |||||||||| |
|
|
| T |
6288397 |
acattccttgcaagtgcattaatgttcattgtgtcacgatagtgcggaagtaaaagcttatgaataggatgaaccacactaagatgcctatttgttgcta |
6288496 |
T |
|
| Q |
141 |
tgatgaacggctcaacaacagcatgagtgttcaacctgtcatacatgtagacattaataaacaactcacagatagataaattatatctgtttctataaat |
240 |
Q |
| |
|
||||||| ||||||||||| |||||||| |||||||||||| |||||| || | |||| || |||| |||| | |||| ||| | || ||| | ||| |
|
|
| T |
6288497 |
tgatgaatggctcaacaactgcatgagtattcaacctgtcacacatgtcgataataatgaataact--cagacatttaaactatgtttggctctct-aat |
6288593 |
T |
|
| Q |
241 |
ctcatttacgaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttcaac |
340 |
Q |
| |
|
|| | |||| ||||| ||||| | ||||||||||| ||| ||||||||||||| |||||| || ||||||||||||||||||| |||||| |
|
|
| T |
6288594 |
cttgggaatagaatttgtaccagtggctgataagttggtgatagcatgagtcatttacaatcacataattcttggcaagtagccaaatagaagattcaac |
6288693 |
T |
|
| Q |
341 |
accttcacttgcagggaagtaaacttcactaagaggtccataactatcatcgtcaggatgtggcttacttagttcaatcgccagtggctttaaagttcca |
440 |
Q |
| |
|
||||||||||||||| ||||| | ||||| | ||| || | | |||| | | |||| || ||||||| || || || | |||||| ||||||||| |
|
|
| T |
6288694 |
accttcacttgcaggcaagtagatatcactgataggatcaaagcgatcaccttttggattcgggctacttagctcgatggctaatggcttaaaagttcca |
6288793 |
T |
|
| Q |
441 |
tcattttgcaagaaaaggatggttctagcagcata |
475 |
Q |
| |
|
|||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
6288794 |
tcattttgtaagaaaatgatggttctagtagcata |
6288828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 7458714 - 7458853
Alignment:
| Q |
47 |
cgtgcaagtgaatttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggtgaaccgtactaaggtgtctgtttgttgctatgatga |
146 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||| |||||||||||||| || | |||||||||| |||||| || || |||||||||||||||| |
|
|
| T |
7458714 |
cgtgcgagggaatttatgttcattgtgtcacggtagtgtggaagtaaaagtttatgaatagggtgaaccacactaagatgcctatttgttgctatgatga |
7458813 |
T |
|
| Q |
147 |
acggctcaacaacagcatgagtgttcaacctgtcatacat |
186 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
7458814 |
atggctcaacaacggcatgagtgttcaacctgtcacacat |
7458853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 6390632 - 6390765
Alignment:
| Q |
58 |
atttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaaca |
157 |
Q |
| |
|
||||||||||||||||| ||| ||||| |||||||||||||| || | |||||||||| |||||| || || ||||||||||||||||| ||||||||| |
|
|
| T |
6390632 |
atttatgttcattgtgttacgatagtgtggaagtaaaagtttatgaatagggtgaaccacactaagatgcctatttgttgctatgatgaatggctcaaca |
6390731 |
T |
|
| Q |
158 |
acagcatgagtgttcaacctgtcatacatgtaga |
191 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
6390732 |
acagcatgagtgttcaacctgtcacacatgtaga |
6390765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 6409837 - 6409970
Alignment:
| Q |
58 |
atttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaaca |
157 |
Q |
| |
|
||||||||||||||||| ||| ||||| |||||||| ||||| || | |||||||||| |||||| || || ||||||||||||||||| ||||||||| |
|
|
| T |
6409837 |
atttatgttcattgtgttacgatagtgtggaagtaatagtttatgaatagggtgaaccacactaagatgcctatttgttgctatgatgaatggctcaaca |
6409936 |
T |
|
| Q |
158 |
acagcatgagtgttcaacctgtcatacatgtaga |
191 |
Q |
| |
|
||||||||||| |||||||||| ||||||||| |
|
|
| T |
6409937 |
gaagcatgagtgtgcaacctgtcacacatgtaga |
6409970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 484
Target Start/End: Original strand, 6263177 - 6263403
Alignment:
| Q |
258 |
taccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttcaacaccttcacttgcaggga |
357 |
Q |
| |
|
||||| ||||| |||||||||||| ||| ||||||||||| | |||||||| || ||||||||||||| | |||||||||||||||| ||||||| | |
|
|
| T |
6263177 |
taccagtggctgacaagttggtgaaagcatgagtcatttactataacataagccttggcaagtagccaaaccgtagcttcaacaccttcaattgcaggca |
6263276 |
T |
|
| Q |
358 |
agtaaacttcactaagaggtccataactatcatcgtcaggatgtggcttacttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaag |
457 |
Q |
| |
|
|||| || | ||||| | ||| | ||| | | ||||||||| ||||| ||||| |||| |||||||||||||||||| ||| ||||||||| |
|
|
| T |
6263277 |
agtagacgttactaacaacaccaaattgatctccttgaggatgtggaagacttaactcaatggccaaaggctttaaagttccatcacttttcaagaaaag |
6263376 |
T |
|
| Q |
458 |
gatggttctagcagcataggcctttgt |
484 |
Q |
| |
|
|| |||||| | ||||||||||||||| |
|
|
| T |
6263377 |
gacggttcttgaagcataggcctttgt |
6263403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 517
Target Start/End: Original strand, 6370027 - 6370162
Alignment:
| Q |
382 |
aactatcatcgtcaggatgtggcttacttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcataggcctt |
481 |
Q |
| |
|
|||||||| | | |||||||||| |||||| ||||| |||| ||| || ||||||||||||| || | ||||| ||||||||||||||||||| ||| |
|
|
| T |
6370027 |
aactatcaccattaggatgtggcaaacttagctcaatggccaatggattcaaagttccatcatctttaacaaaaagaatggttctagcagcataggtctt |
6370126 |
T |
|
| Q |
482 |
tgtctcagttgcatttattttcctcaaatatggata |
517 |
Q |
| |
|
|| |||||| |||||| |||||||||||||||||| |
|
|
| T |
6370127 |
tgcttcagtttcatttactttcctcaaatatggata |
6370162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 6369683 - 6369804
Alignment:
| Q |
58 |
atttatgttcattgtgtcacggtagtgaggaagtaaaagtttgtggacagggtgaaccgtactaaggtgtctgtttgttgctatgatgaacggctcaaca |
157 |
Q |
| |
|
||||||| |||| ||| |||| ||||| |||| ||||||||| || | |||||||| | |||||| || || ||||||||||||| ||| ||||||||| |
|
|
| T |
6369683 |
atttatggtcatcgtgccacgatagtgtggaactaaaagtttatgaatagggtgaagcacactaagatgcctatttgttgctatgacgaatggctcaaca |
6369782 |
T |
|
| Q |
158 |
acagcatgagtgttcaacctgt |
179 |
Q |
| |
|
|||||||| || |||||||||| |
|
|
| T |
6369783 |
acagcatgtgttttcaacctgt |
6369804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 355
Target Start/End: Original strand, 6390832 - 6390937
Alignment:
| Q |
250 |
gaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttcaacaccttcact |
349 |
Q |
| |
|
||||||||||||| ||||| | ||||||||||| ||| | |||||| ||||| | ||||| || ||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
6390832 |
gaaattcataccagtggctgataagttggtgatagcatgcgtcattcacaacagcgtaagccttggcaaggtgccaaattgaagcatcaacaccttcact |
6390931 |
T |
|
| Q |
350 |
tgcagg |
355 |
Q |
| |
|
|||||| |
|
|
| T |
6390932 |
tgcagg |
6390937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 355
Target Start/End: Original strand, 6410036 - 6410141
Alignment:
| Q |
250 |
gaaattcataccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttcaacaccttcact |
349 |
Q |
| |
|
||||||||||||||||||| | |||||| |||| ||| | |||||||||||| | ||||| || ||||| ||||||| ||||| |||||||||||| | |
|
|
| T |
6410036 |
gaaattcataccaatggctgataagttgatgatagcaggcgtcatttacaacagcgtaagccttggcaaggcgccaaattgaagcatcaacaccttcagt |
6410135 |
T |
|
| Q |
350 |
tgcagg |
355 |
Q |
| |
|
|||||| |
|
|
| T |
6410136 |
tgcagg |
6410141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 6456798 - 6456845
Alignment:
| Q |
131 |
tttgttgctatgatgaacggctcaacaacagcatgagtgttcaacctg |
178 |
Q |
| |
|
||||||||||||||||| || |||||||| |||||||| ||||||||| |
|
|
| T |
6456798 |
tttgttgctatgatgaatggttcaacaactgcatgagtattcaacctg |
6456845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 9605625 - 9605566
Alignment:
| Q |
118 |
actaaggtgtctgtttgttgctatgatgaacggctcaacaacagcatgagtgttcaacct |
177 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||| || |||||||| |||||||| |
|
|
| T |
9605625 |
actaagatgtctgtttgttgctatgatgaatggctcaaccactgcatgagtattcaacct |
9605566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 42688854 - 42688772
Alignment:
| Q |
273 |
agttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttcaacaccttcacttgcagg |
355 |
Q |
| |
|
||||| |||| |||||| ||||| || || ||||||||||| || ||||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
42688854 |
agttgatgatagcaagaatcattaaccaccacataagcttttgctagtagccaaatagtactttcaacaccttcatttgcagg |
42688772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 42692981 - 42693070
Alignment:
| Q |
257 |
ataccaatggctaacaagttggtgatggcaagagtcatttacaactacataagctttagcaagtagccaaatagaagcttcaacaccttc |
346 |
Q |
| |
|
|||||||||||| |||||||| |||| || || ||||| || ||||||||||| ||||| |||| |||||||| | |||||||||||| |
|
|
| T |
42692981 |
ataccaatggctgacaagttgatgataacaggaatcattcactactacataagccttagccagtaaccaaatagtactttcaacaccttc |
42693070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 42688734 - 42688652
Alignment:
| Q |
393 |
tcaggatgtggcttacttagttcaatcgccagtggctttaaagttccatcattttgcaagaaaaggatggttctagcagcata |
475 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |||||||||| ||||||| | || | ||||||||| || |||| |||||| |
|
|
| T |
42688734 |
tcaggatgtggcaaacttaattcaatcgccactggctttaaatttccatcttcttttaggaaaaggattgtcctagtagcata |
42688652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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