View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2856-Insertion-19 (Length: 314)
Name: NF2856-Insertion-19
Description: NF2856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2856-Insertion-19 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 5e-93; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 8 - 233
Target Start/End: Complemental strand, 42648373 - 42648148
Alignment:
| Q |
8 |
tcatgcctaaagatgttaagctagtttctcaattttctgatggatttttaggctcttttgtacaaaaagaaaatagacaaataataatatatagattaag |
107 |
Q |
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| T |
42648373 |
tcatgcctaaagatgttaagctagtttctcaattttctgatggatttttaggctcttttgtacaaaaagaaaatagacaaataataacatatagattaag |
42648274 |
T |
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| Q |
108 |
gaatttaatatagaaatgttgtgtttgnnnnnnnagaagtttaaaaattgtcatttccactgcaaggctactattttaggnnnnnnnnacataattattg |
207 |
Q |
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| T |
42648273 |
gaatttaatatagaaatgttgtgtttgtttttttagaagtttaaaaattgtcatttccactgcaaggctactattataggttttttttacataattattg |
42648174 |
T |
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| Q |
208 |
tccttagaacacttgatataattata |
233 |
Q |
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| T |
42648173 |
tccttagaacacttgatataattata |
42648148 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 42647426 - 42647337
Alignment:
| Q |
225 |
ataattataatagtgtgaattgcccatttgctcatgcacttgttatatcagtttccacaccaattctaactaacgagtcaagtgatgatt |
314 |
Q |
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| T |
42647426 |
ataattataatagtgtgaattgtccatttgctcatgcacttgttatatcagtttccacaccaattctaactaacgagtcaagtgatgatt |
42647337 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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