View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2856-Insertion-4 (Length: 948)

Name: NF2856-Insertion-4
Description: NF2856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2856-Insertion-4
NF2856-Insertion-4
[»] chr4 (34 HSPs)
chr4 (8-948)||(4774169-4775108)
chr4 (491-948)||(18578684-18579140)
chr4 (489-935)||(44050657-44051106)
chr4 (489-935)||(10422985-10423420)
chr4 (493-948)||(38460489-38460933)
chr4 (491-948)||(37394768-37395229)
chr4 (498-948)||(3407804-3408245)
chr4 (664-948)||(24415393-24415678)
chr4 (630-944)||(10374240-10374543)
chr4 (512-948)||(49563923-49564350)
chr4 (585-846)||(51642162-51642423)
chr4 (491-856)||(50904819-50905172)
chr4 (491-921)||(6186716-6187140)
chr4 (772-948)||(19069533-19069708)
chr4 (491-730)||(50278595-50278836)
chr4 (489-730)||(51492130-51492372)
chr4 (775-948)||(11506659-11506831)
chr4 (489-735)||(19069246-19069492)
chr4 (489-730)||(15995781-15996022)
chr4 (491-889)||(30043046-30043434)
chr4 (504-661)||(24414909-24415066)
chr4 (491-730)||(44674199-44674438)
chr4 (489-730)||(37015957-37016199)
chr4 (400-456)||(21472566-21472623)
chr4 (400-456)||(44561412-44561469)
chr4 (400-471)||(34154469-34154541)
chr4 (403-457)||(6283518-6283573)
chr4 (400-450)||(24417503-24417554)
chr4 (401-455)||(37959803-37959858)
chr4 (400-457)||(958674-958732)
chr4 (400-457)||(29700383-29700441)
chr4 (508-566)||(51642096-51642154)
chr4 (403-467)||(11494481-11494546)
chr4 (397-457)||(51426468-51426529)
[»] chr1 (54 HSPs)
chr1 (489-948)||(1655645-1656103)
chr1 (491-948)||(13177691-13178144)
chr1 (491-931)||(19495101-19495544)
chr1 (488-948)||(7966041-7966496)
chr1 (489-948)||(25039646-25040090)
chr1 (489-947)||(36072428-36072879)
chr1 (491-948)||(8459019-8459465)
chr1 (491-948)||(4517959-4518427)
chr1 (491-948)||(51666231-51666677)
chr1 (491-948)||(9710639-9711085)
chr1 (489-948)||(50113366-50113829)
chr1 (491-948)||(44469576-44470023)
chr1 (608-948)||(33168082-33168421)
chr1 (489-948)||(38689990-38690416)
chr1 (529-948)||(46978799-46979231)
chr1 (491-948)||(29352294-29352741)
chr1 (491-948)||(30909594-30910041)
chr1 (489-948)||(20353500-20353949)
chr1 (579-944)||(37018965-37019319)
chr1 (491-948)||(5141435-5141872)
chr1 (512-948)||(13633437-13633863)
chr1 (491-948)||(38771690-38772139)
chr1 (489-948)||(3944033-3944483)
chr1 (489-948)||(3993407-3993857)
chr1 (588-948)||(5081929-5082280)
chr1 (491-730)||(22345821-22346055)
chr1 (590-948)||(12643369-12643713)
chr1 (589-948)||(6558047-6558409)
chr1 (489-752)||(46886138-46886402)
chr1 (488-730)||(52805332-52805574)
chr1 (512-807)||(15051053-15051338)
chr1 (547-730)||(22527467-22527650)
chr1 (530-730)||(94498-94698)
chr1 (491-728)||(21144405-21144643)
chr1 (572-730)||(31780110-31780268)
chr1 (494-730)||(470842-471079)
chr1 (570-730)||(16281838-16281997)
chr1 (547-730)||(19521714-19521897)
chr1 (554-729)||(50617327-50617503)
chr1 (492-699)||(47714890-47715089)
chr1 (594-662)||(29261529-29261597)
chr1 (489-634)||(23359217-23359363)
chr1 (400-456)||(19053993-19054050)
chr1 (403-471)||(49927580-49927649)
chr1 (403-456)||(13972001-13972055)
chr1 (400-456)||(1656166-1656223)
chr1 (403-461)||(11183123-11183182)
chr1 (400-454)||(36076641-36076696)
chr1 (400-471)||(13178199-13178269)
chr1 (403-471)||(23276175-23276244)
chr1 (404-469)||(36911737-36911803)
chr1 (399-455)||(21944463-21944520)
chr1 (415-471)||(27485008-27485065)
chr1 (400-456)||(46973138-46973195)
[»] chr5 (40 HSPs)
chr5 (491-948)||(33994714-33995160)
chr5 (491-948)||(24053215-24053671)
chr5 (489-948)||(24050086-24050546)
chr5 (546-944)||(7796694-7797081)
chr5 (491-948)||(13563702-13564149)
chr5 (506-948)||(30352504-30352938)
chr5 (489-898)||(25877680-25878089)
chr5 (485-948)||(27863458-27863911)
chr5 (489-948)||(34122583-34123046)
chr5 (494-948)||(28882058-28882496)
chr5 (491-948)||(38855776-38856223)
chr5 (489-948)||(37814641-37815090)
chr5 (491-948)||(1039357-1039817)
chr5 (491-948)||(11029069-11029515)
chr5 (489-948)||(25890053-25890502)
chr5 (491-890)||(34079753-34080143)
chr5 (489-869)||(7017571-7017941)
chr5 (772-948)||(14280543-14280718)
chr5 (489-730)||(38407206-38407447)
chr5 (489-714)||(28388307-28388533)
chr5 (788-948)||(28387821-28387979)
chr5 (493-662)||(4196618-4196788)
chr5 (769-948)||(4196846-4197022)
chr5 (572-899)||(6267617-6267933)
chr5 (818-948)||(43179430-43179559)
chr5 (491-730)||(7762015-7762256)
chr5 (554-730)||(41799541-41799716)
chr5 (491-797)||(43179605-43179902)
chr5 (489-615)||(14280787-14280914)
chr5 (491-540)||(31094597-31094646)
chr5 (403-471)||(18307192-18307260)
chr5 (601-726)||(16440192-16440317)
chr5 (403-471)||(3603215-3603284)
chr5 (400-471)||(24053114-24053186)
chr5 (398-456)||(42537133-42537192)
chr5 (398-471)||(18538402-18538476)
chr5 (403-456)||(30611176-30611230)
chr5 (403-456)||(30612898-30612952)
chr5 (400-456)||(33993214-33993271)
chr5 (398-427)||(34682189-34682218)
[»] chr2 (48 HSPs)
chr2 (409-948)||(12905492-12906037)
chr2 (489-948)||(43943748-43944209)
chr2 (399-948)||(45479386-45479934)
chr2 (489-931)||(28342582-28343015)
chr2 (493-944)||(41181474-41181914)
chr2 (489-935)||(24601698-24602147)
chr2 (489-935)||(24611967-24612416)
chr2 (489-944)||(9659609-9660069)
chr2 (489-948)||(41004587-41005044)
chr2 (491-932)||(41052683-41053126)
chr2 (491-944)||(1096630-1097087)
chr2 (489-948)||(7267009-7267458)
chr2 (532-948)||(439375-439792)
chr2 (489-948)||(81815-82276)
chr2 (495-948)||(24753589-24754032)
chr2 (491-948)||(39798005-39798451)
chr2 (512-948)||(41564055-41564482)
chr2 (491-948)||(3795398-3795858)
chr2 (489-948)||(5351296-5351746)
chr2 (491-948)||(10620034-10620482)
chr2 (489-948)||(209043-209493)
chr2 (489-727)||(25184606-25184844)
chr2 (572-846)||(38950232-38950496)
chr2 (769-948)||(1150596-1150774)
chr2 (491-730)||(10825279-10825519)
chr2 (530-730)||(39950943-39951143)
chr2 (554-730)||(32952855-32953031)
chr2 (558-730)||(29398038-29398206)
chr2 (512-809)||(18000315-18000603)
chr2 (843-948)||(38949751-38949855)
chr2 (632-752)||(3206950-3207070)
chr2 (554-730)||(25613328-25613503)
chr2 (770-934)||(25613533-25613697)
chr2 (489-635)||(7189820-7189965)
chr2 (400-471)||(2917617-2917689)
chr2 (493-540)||(3206842-3206889)
chr2 (406-471)||(43950308-43950374)
chr2 (400-456)||(34921840-34921897)
chr2 (403-471)||(41500301-41500370)
chr2 (396-471)||(25964734-25964810)
chr2 (842-898)||(43668499-43668555)
chr2 (400-471)||(45475374-45475446)
chr2 (401-471)||(8268816-8268887)
chr2 (406-455)||(2648057-2648107)
chr2 (403-456)||(16580482-16580536)
chr2 (402-455)||(19186683-19186737)
chr2 (491-540)||(38950515-38950565)
chr2 (403-471)||(41181374-41181443)
[»] chr6 (32 HSPs)
chr6 (508-948)||(29667388-29667827)
chr6 (489-948)||(23958949-23959398)
chr6 (485-932)||(29286258-29286695)
chr6 (491-935)||(25140682-25141117)
chr6 (494-944)||(7537250-7537704)
chr6 (493-935)||(18609810-18610242)
chr6 (491-948)||(31150630-31151076)
chr6 (489-944)||(2051087-2051545)
chr6 (490-948)||(28362282-28362744)
chr6 (491-948)||(1608353-1608802)
chr6 (772-948)||(13382974-13383149)
chr6 (502-766)||(26702448-26702702)
chr6 (489-730)||(11840022-11840264)
chr6 (489-735)||(13382688-13382933)
chr6 (682-948)||(2259338-2259592)
chr6 (491-912)||(34230550-34230953)
chr6 (491-684)||(2258347-2258540)
chr6 (489-752)||(18351393-18351657)
chr6 (560-730)||(3502436-3502606)
chr6 (570-707)||(8304578-8304715)
chr6 (489-730)||(31771512-31771755)
chr6 (572-781)||(20448508-20448717)
chr6 (572-752)||(20439755-20439935)
chr6 (572-748)||(19129120-19129293)
chr6 (572-730)||(20436069-20436227)
chr6 (819-912)||(20448388-20448480)
chr6 (400-456)||(29667828-29667885)
chr6 (400-456)||(32026039-32026096)
chr6 (776-807)||(18351348-18351379)
chr6 (403-472)||(2405443-2405513)
chr6 (400-456)||(13479660-13479717)
chr6 (820-912)||(19129549-19129642)
[»] chr7 (34 HSPs)
chr7 (491-948)||(10705309-10705765)
chr7 (489-944)||(34622558-34623002)
chr7 (489-935)||(19044352-19044802)
chr7 (489-935)||(20709834-20710284)
chr7 (491-948)||(47742554-47743001)
chr7 (491-948)||(15069915-15070363)
chr7 (515-948)||(18109358-18109781)
chr7 (512-948)||(603862-604287)
chr7 (608-935)||(12111394-12111719)
chr7 (491-948)||(42503403-42503851)
chr7 (491-948)||(43619740-43620188)
chr7 (489-948)||(30790571-30791022)
chr7 (489-948)||(45767425-45767875)
chr7 (776-948)||(29592839-29593010)
chr7 (664-948)||(47064859-47065146)
chr7 (491-730)||(40928725-40928965)
chr7 (491-732)||(34742166-34742407)
chr7 (489-727)||(29592602-29592841)
chr7 (491-730)||(5537907-5538145)
chr7 (530-730)||(17838407-17838607)
chr7 (491-730)||(13323487-13323727)
chr7 (651-730)||(10522287-10522366)
chr7 (485-586)||(36186416-36186517)
chr7 (496-615)||(12111267-12111387)
chr7 (403-471)||(19044231-19044300)
chr7 (403-471)||(20710336-20710405)
chr7 (403-471)||(21190655-21190724)
chr7 (403-471)||(30355306-30355375)
chr7 (403-456)||(28980255-28980309)
chr7 (403-471)||(45361586-45361655)
chr7 (397-471)||(36186539-36186614)
chr7 (408-448)||(10708360-10708401)
chr7 (400-456)||(28112776-28112833)
chr7 (403-471)||(40590558-40590627)
[»] chr3 (45 HSPs)
chr3 (491-948)||(66935-67391)
chr3 (489-944)||(6489388-6489847)
chr3 (496-946)||(21951866-21952305)
chr3 (491-948)||(9426666-9427113)
chr3 (491-948)||(13743328-13743774)
chr3 (491-948)||(4002056-4002517)
chr3 (489-948)||(48246471-48246919)
chr3 (489-948)||(6744891-6745340)
chr3 (547-948)||(46989629-46990034)
chr3 (491-948)||(2857547-2857994)
chr3 (489-934)||(36812896-36813346)
chr3 (491-948)||(3952779-3953227)
chr3 (489-948)||(30943248-30943699)
chr3 (491-948)||(8156569-8157017)
chr3 (772-948)||(2743788-2743963)
chr3 (493-818)||(7841158-7841474)
chr3 (772-948)||(50957244-50957419)
chr3 (769-948)||(14402570-14402748)
chr3 (489-730)||(600316-600558)
chr3 (498-730)||(50213525-50213758)
chr3 (489-730)||(47070527-47070769)
chr3 (530-730)||(36134055-36134255)
chr3 (491-735)||(50957460-50957704)
chr3 (530-727)||(42166187-42166384)
chr3 (491-730)||(16646946-16647185)
chr3 (554-730)||(2271479-2271656)
chr3 (530-731)||(9473720-9473921)
chr3 (530-727)||(52387900-52388097)
chr3 (489-691)||(14402808-14403010)
chr3 (491-635)||(2743459-2743603)
chr3 (666-735)||(2743678-2743747)
chr3 (489-635)||(4004905-4005050)
chr3 (400-456)||(43568860-43568917)
chr3 (403-456)||(51402480-51402534)
chr3 (404-456)||(42756097-42756150)
chr3 (399-471)||(45101915-45101988)
chr3 (400-471)||(66835-66907)
chr3 (489-527)||(7839476-7839515)
chr3 (403-457)||(34722221-34722276)
chr3 (403-456)||(11380378-11380432)
chr3 (403-456)||(41577012-41577066)
chr3 (403-468)||(44227066-44227132)
chr3 (403-471)||(2433010-2433079)
chr3 (400-456)||(29918423-29918480)
chr3 (400-456)||(29967576-29967633)
[»] chr8 (41 HSPs)
chr8 (493-944)||(43376848-43377302)
chr8 (501-911)||(4867394-4867804)
chr8 (500-944)||(2124248-2124698)
chr8 (647-948)||(7171882-7172182)
chr8 (491-948)||(39518-39965)
chr8 (491-948)||(35962368-35962815)
chr8 (489-948)||(43679456-43679904)
chr8 (496-948)||(23924032-23924473)
chr8 (489-948)||(31959612-31960075)
chr8 (8-211)||(27237570-27237773)
chr8 (491-948)||(7344121-7344569)
chr8 (529-948)||(30301233-30301643)
chr8 (638-948)||(22588007-22588306)
chr8 (503-852)||(39751134-39751473)
chr8 (489-948)||(32375710-32376160)
chr8 (489-948)||(8419463-8419913)
chr8 (570-948)||(22661139-22661506)
chr8 (491-700)||(23578496-23578705)
chr8 (491-833)||(20548938-20549270)
chr8 (491-727)||(41743925-41744162)
chr8 (776-948)||(41744160-41744331)
chr8 (489-730)||(34366970-34367212)
chr8 (493-650)||(7172463-7172623)
chr8 (570-730)||(41238989-41239149)
chr8 (844-944)||(39751659-39751758)
chr8 (241-398)||(27237408-27237573)
chr8 (595-781)||(30972595-30972781)
chr8 (572-730)||(31280953-31281113)
chr8 (491-610)||(1116107-1116226)
chr8 (572-696)||(29807044-29807168)
chr8 (820-911)||(31281193-31281282)
chr8 (404-456)||(41855306-41855359)
chr8 (403-471)||(41858188-41858257)
chr8 (403-456)||(40077332-40077386)
chr8 (403-471)||(5300684-5300753)
chr8 (403-471)||(18441508-18441577)
chr8 (491-539)||(29807193-29807241)
chr8 (401-459)||(42602395-42602454)
chr8 (403-455)||(5304227-5304280)
chr8 (400-456)||(7168022-7168079)
chr8 (491-520)||(39277444-39277473)
[»] scaffold0494 (1 HSPs)
scaffold0494 (491-948)||(4891-5339)
[»] scaffold0116 (1 HSPs)
scaffold0116 (489-948)||(15520-15969)
[»] scaffold0201 (1 HSPs)
scaffold0201 (489-948)||(22462-22922)
[»] scaffold0219 (2 HSPs)
scaffold0219 (489-866)||(19743-20126)
scaffold0219 (864-944)||(19503-19582)
[»] scaffold0057 (1 HSPs)
scaffold0057 (544-946)||(21764-22144)
[»] scaffold0513 (1 HSPs)
scaffold0513 (489-842)||(8258-8602)
[»] scaffold0169 (2 HSPs)
scaffold0169 (491-669)||(1517-1695)
scaffold0169 (798-948)||(10829-10978)
[»] scaffold0011 (1 HSPs)
scaffold0011 (489-730)||(236008-236248)
[»] scaffold0794 (1 HSPs)
scaffold0794 (775-948)||(1316-1488)
[»] scaffold0199 (1 HSPs)
scaffold0199 (547-730)||(12521-12704)
[»] scaffold1379 (1 HSPs)
scaffold1379 (403-471)||(501-570)


Alignment Details
Target: chr4 (Bit Score: 905; Significance: 0; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 905; E-Value: 0
Query Start/End: Original strand, 8 - 948
Target Start/End: Complemental strand, 4775108 - 4774169
Alignment:
8 ttctttgcacccaaatggtataatatgcttttggacattctttaatttgcacaaaattattggttatatttgtctacatacattatgtgatgtgatattt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
4775108 ttctttgcacccaaatggtataatatgcttttggacattctttaatttgcacaaaattattggttatatttgtctacatacattatgtgatgtgatattt 4775009  T
108 gtgaaggtcacaagttgcaatttgaaacgttgcagcttcttatttatccaaaactataattctatttgatcacgaggacaaaataactcgtcccatgaac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
4775008 gtgaaggtcacaagttgcaatttgaaacgttgcagcttcttatttatccaaaactataattctatttgatcacgaggacaaaataactcgtcccatgaac 4774909  T
208 ttatttccctggtttttaaattatgatttcactttatgatcaagtgattaagcatgtgcaatttaatgtcgccacaaagagtgctgttcctatatgtccc 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
4774908 ttatttccctggtttttaaattatgatttcactttatgatcaagtgattaagcatgtgcaatttaatgtcgccacaaagagtgctgttcctatatgcccc 4774809  T
308 ccaccaaaattaaagtcttcgcactttgtttgaagttgtgaacaagttctacaagtaacttcactattgtcttgattagaagtttatgtttggaaaattg 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
4774808 ccaccaaaattaaagtcttcgcactttgtttgaagttgtgaacaagttctacaagtaacttcactattgtcttgattagaagtttatgtttagaaaattg 4774709  T
408 ttgttgacacatttcataagctgagaaacatgagtaaaatacgtttttgttcccacggcagttagaatttaaaagttggttgtagttaactgccgaggaa 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
4774708 ttgttgacacatttcataagctgagaaacatgagtaaaatacgtttttgttcccacggcagttagaatttaaaaattggctgtagttaactgccgaggaa 4774609  T
508 aacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaagg 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
4774608 aacaattatgcagacagtggtttctgcataattgttaagcatttccaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaagc 4774509  T
608 caatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaa 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
4774508 caatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaatcgacatttggttcaaa 4774409  T
708 atacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttac 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
4774408 atacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttac 4774309  T
808 atgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataag 907  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
4774308 atgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataag 4774209  T
908 ccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||||||||||||||||| |||||||||||||    
4774208 ccaagccatatagcttgccgttttcca-tgcgtattcatct 4774169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 18578684 - 18579140
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||| |||    
18578684 agttatctgccgagaaaaacatttatgcagacagtggattctgcataattgttaagcatttccaagccatttttcggctagtttttacttgtaattcaac 18578783  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
18578784 cagagtatttccaaaggcaatataacttatacaacatttaaactcactcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaa 18578883  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    |||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||||||   |||||||||||||||||||||||||||||||||||    
18578884 ccgacatttgattcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccataattaaacaacacattacaactcattacacatcattaa 18578983  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    |||||||| || ||||||| |||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||    
18578984 attaaatcacttcttacattcaacgcaattgcatatagaactaacatacatatataatatattatcttctaccatattccgaaacataaattcgacgtcg 18579083  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||   ||| ||||||| ||||||||||||||||||||| |||||||||||||    
18579084 ctatcgtcttcaattagccaaggcatatagcttgccgttttcca-tgcgtattcatct 18579140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 489 - 935
Target Start/End: Complemental strand, 44051106 - 44050657
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||| ||||||||||||| | ||||||||| ||||||| |    
44051106 gtagttaactgccgaggaaaacaattatgcaaacagtgggttctgcataattctaaagcatttccaagccatttttcggccagtttttacttgtaattaa 44051007  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
44051006 accagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatca 44050907  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacaca 783  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||    | | | |||  |||||||||||||||    
44050906 aaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacaca 44050808  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatcc 883  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
44050807 tcattaaattaaatccctacttgcattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcc 44050708  T
884 gacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    ||||||||||||||||| ||||||||||  |||||||||||  |||||||||    
44050707 gacgtcgctatcgtcgcgaataagccaa-acatatagcttgttgttttccat 44050657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 489 - 935
Target Start/End: Complemental strand, 10423420 - 10422985
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||| | | ||||| ||| ||||||||||||| | ||||||||||||||||| |    
10423420 gtagttaactgccgaggaaaacaattatgcagacagtgggttttgcataaatctaaagcaattccaagccatttttcggccagtttttacctgtaattaa 10423321  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||| |||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||| ||||| ||||||||||||||||||||||| |    
10423320 accagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatac-atatcttttacaattgtccataattaaatta 10423222  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||||||| |||||||| |||||||| ||||||||||||| ||| |||||||  ||||||||   |||          ||||||||||||| ||||||    
10423221 aaccgacattaggttcaaattacacaaacgtttgaaattcatcaaaacgttacaatgtgtccataattaa----------acaactcattacatatcatt 10423132  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
10423131 agattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 10423032  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    ||| |||| ||| ||||||||||| ||||||||||| ||||||||||    
10423031 cgcaatcgccgcgaataagccaagacatatagcttgtcgttttccat 10422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 493 - 948
Target Start/End: Original strand, 38460489 - 38460933
Alignment:
493 ttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacca 592  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||| |||||||||||||   ||||||||||||||||| |||||    
38460489 ttaactgccgaggaaaacaattatgcagtcagtgggttctgcataattctaaagcatttccaagccatttttcggtcagtttttacctgtaattaaacca 38460588  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaacc 692  Q
    |||||||| |||||||||||||| | |||||||||| |||||| ||||||| |||| |||||| |||||| ||||||||||||||||||||||| |||||    
38460589 gagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataatatcttttacaattgtccataattaaattaaacc 38460688  T
693 gacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaat 792  Q
    |||||||| |||||| |||||||||||||||||||||| |||  |||||| |||||||||   |||          |||||||||||||||| |||| ||    
38460689 gacatttgattcaaattacacaaaagtttgaaattcatcaaaatgttacaaagtgtccataattaa----------acaactcattacacatgattatat 38460778  T
793 taaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgct 892  Q
    ||||||||||||||||| || | |||||||||||| ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||    
38460779 taaatccctacttacattcatcacaattgcatatgcaacaaacatacatatataatatattattttccaccatattctgaaacataaatccaacgtcgct 38460878  T
893 atcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||   ||||||||||| ||||||||||||||||||||| |||| ||||||||    
38460879 atcgtctttaataagccaaggcatatagcttgccgttttcca-tgcgcattcatct 38460933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 37395229 - 37394768
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||| |||||||||||||  |||||||||||||||| |||||||||||| | || |||||  ||||||||||| || | ||||||||||||||||| |    
37395229 agttaattgccgaggaaaactgattatgcagacagtgggttctgcataattctaaa-cattttcaagccattttttcggccagtttttacctgtaattaa 37395131  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||||||||| || |||| | |||||||||| |||||| | ||||| ||||  |||||||||||| ||||||||||||||||||||||| |    
37395130 accagagcatttccaaaggaaaaataattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatta 37395031  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa---caacacatta--caactcattacaca 783  Q
    |||||||||||| |||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||    | | | ||||  ||||||||||||||    
37395030 aaccgacatttgattcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacaca 37394932  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatcc 883  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
37394931 tcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatct 37394832  T
884 gacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||||| |||||||||||||    
37394831 gacgtcgctatcgtcgcgaataagccaaggcatacaacttgccgttttcca-tgcgtattcatct 37394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 498 - 948
Target Start/End: Complemental strand, 3408245 - 3407804
Alignment:
498 tgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagag 595  Q
    |||||||||||||  |||||| ||||||||| |||||||||||| | || |||||| ||||||||||| || | ||||||||| ||||||| ||||||||    
3408245 tgccgaggaaaactgattatgtagacagtgggttctgcataattctaaa-catttccaagccattttttcggccagtttttacttgtaattaaaccagag 3408147  T
596 catttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgac 695  Q
    ||||||||||||||| |||| | |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| ||||||||||| ||||||||    
3408146 catttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaaccgac 3408047  T
696 attt-ggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaatta 794  Q
    |||| |||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||||||||    
3408046 attttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcattaaatta 3407957  T
795 aatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctat 894  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |    
3407956 aatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgt 3407857  T
895 cgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||| ||||||| ||| ||||||||||||||||||||| || ||||||||||    
3407856 cgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgtgtattcatct 3407804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 664 - 948
Target Start/End: Original strand, 24415393 - 24415678
Alignment:
664 tttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaac 763  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||||    
24415393 tttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaac 24415492  T
764 acattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccacc 863  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||||| |    
24415493 acattacaactcattacatatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattattttccatc 24415592  T
864 atattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagcc--atatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||||||| | ||||||||||||||   |||||| |||| |  |||||||||| ||||||||| || ||||||||||    
24415593 atattccgaaacataaatgcaacgtcgctatcgtcttcaataagtcaaggcatatatagcttgtcgttttcca-tgtgtattcatct 24415678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 630 - 944
Target Start/End: Original strand, 10374240 - 10374543
Alignment:
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattca 729  Q
    |||||| ||||||| |||| ||||||||||| | |||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
10374240 aaactcggtcataaccaagaaaaatacaataccttttacagttgtccataattaaatgaaaccgacatttggttcaaattacacaaacgtttgaaattca 10374339  T
730 ttaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatgga 829  Q
    | ||| | |||||  ||||||||   |||||||          ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
10374340 tcaaaacattacaaggtgtccataattaaacaa----------ctcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatgga 10374429  T
830 acgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgtt 929  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||||    
10374430 acgaacatacatatataatatattatcttccaccatatttcgaaacataaatctgatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtt 10374529  T
930 ttccattgcgtattc 944  Q
    ||||| |||||||||    
10374530 ttcca-tgcgtattc 10374543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 512 - 948
Target Start/End: Original strand, 49563923 - 49564350
Alignment:
512 attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaa 610  Q
    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |||||||||||||||||||| ||    
49563923 attatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa 49564021  T
611 tataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaa 708  Q
    ||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||  ||||||||||| ||||||||||| |||||||||||||||| |||     
49564022 tataattcatatgtatgattgaaactcggacataatgaagataaatacaatatattttacaattgttcataattaaattaaaccgacatttggttaaaat 49564121  T
709 tacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttaca 808  Q
    || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||||||||||||||||||||||    
49564122 taaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcattaaattaaatccctacttaca 49564211  T
809 tgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagc 908  Q
    | ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
49564212 ttcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagc 49564311  T
909 caagccatatagcttgccgttttccattgcgtattcatct 948  Q
     ||| ||||||||||||||||||||| |||||||||||||    
49564312 aaaggcatatagcttgccgttttcca-tgcgtattcatct 49564350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 585 - 846
Target Start/End: Original strand, 51642162 - 51642423
Alignment:
585 tttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
    |||||||||||||||| |||||||||||||| | |||||| ||| ||||||  |||||| |||| ||||||||||||| |||||||||||||||||||||    
51642162 tttaaccagagcattttcaaaggcaatataaatcatacaatattgaaactcgatcataaacaagaaaaatacaatatcttttacaattgtccataattaa 51642261  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| | |||||||   |||||||||||||||||||||||||| ||    
51642262 atcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaattgtccataattaaacaacacattacaactcattacatat 51642361  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatata 846  Q
    |||||| ||||||||| |||||||| || | ||||| ||||| |||||||||||||||||||    
51642362 cattaagttaaatcccaacttacattcatcacaattacatatagaacgaacatacatatata 51642423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 491 - 856
Target Start/End: Complemental strand, 50905172 - 50904819
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||||||||||||||||||  |||||||||  |||||||||||| | | ||||||| ||||||||||||| | | ||||||||||||||| |||    
50905172 agttaactgccgaggaaaacaatta--cagacagtgagttctgcataattctaatgcatttccaagccatttttcggccaatttttacctgtaattaaac 50905075  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||||||||| ||| ||||||||| | |||||||||| ||||||   ||||| |||| ||||||  | ||| |||||||||||||||||||||||||||    
50905074 cagagcatttctaaatgcaatataaatcatacaacattgaaactcgaacataaacaagaaaaatatgaaatcttttacaattgtccataattaaatcaaa 50904975  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||| ||||||| |||||||| ||||||||||||| ||| || |||| ||||| |||   |||          |||| ||||| |||||||||||    
50904974 ccgacattttgttcaaattacacaaacgtttgaaattcatcaaaacgatacaaagtgttcataattaa----------acaattcatttcacatcattaa 50904885  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatc 856  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||| ||||||||    
50904884 attaaatccctacttacattcaacacaattgcatatggaacaaacatacaaatataatatattatc 50904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 491 - 921
Target Start/End: Original strand, 6186716 - 6187140
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||  ||||||||||||| ||| |||| ||||||||  || ||      | ||||||||| |  ||||||||||||||||| |||    
6186716 agttaactgccgaggaaagtaattatgcagacaatgggttctacataattg--aacca------aaccatttttcaatcagtttttacctgtaattcaac 6186807  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcata--agcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    || ||||||||| |||||||||  | |  ||||||||||| |||||||||||  | |||| |||||||| |||| |||| | | ||| ||||||||||||    
6186808 caaagcatttccgaaggcaatactagtcgtacaacatttatactcagtcatataaacaagaaaaatacattatcttttatagtagtcaataattaaatca 6186907  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    | ||||||||| ||| ||| |||||  | ||||||||||||| ||| | ||| |  ||||||||   ||||||||||||||||||  |||||| ||||||    
6186908 atccgacatttcgttaaaattacacgtatgtttgaaattcatcaaaacattaaagggtgtccataattaaacaacacattacaacatattacatatcatt 6187007  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    |||||||||| ||||| |||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| | ||    
6187008 aaattaaatctctactgacattctacgcatttgcatatggaacgaacatacatatataatatattatcttccaccatattgctaaacataaatccaatgt 6187107  T
889 cgctatcgtcgcaaataagccaagccatatagc 921  Q
    |||||||||||  ||||||||||| || |||||    
6187108 cgctatcgtcgtgaataagccaagacacatagc 6187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 772 - 948
Target Start/End: Original strand, 19069533 - 19069708
Alignment:
772 actcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccg 871  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
19069533 actcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatgtataatatattatcttccaccatattccg 19069632  T
872 aaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||| ||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
19069633 aaacataaacccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 19069708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 491 - 730
Target Start/End: Complemental strand, 50278836 - 50278595
Alignment:
491 agttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||||||||||||||||||| ||||||||||||||   ||||||| ||| | ||  ||||  ||||||||||| |||  ||||||||||||||||| |    
50278836 agttaactgccgaggaaaacaaattatgcagacagtgagctctgcatgattctaaaatattttcaagccattttttcgatcagtttttacctgtaattaa 50278737  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    | ||||||||||| |||||||| ||||  ||||||||||| |||||| | ||||| |||| ||||||||||||| ||||||||| | |||||||||||||    
50278736 aacagagcatttcgaaaggcaaaataatctatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaattattcataattaaatca 50278637  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||||| ||| |||||||| |||||||||||||    
50278636 aaccgacatttggttgaaattacacaaacgtttgaaattcat 50278595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 489 - 730
Target Start/End: Original strand, 51492130 - 51492372
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    |||||||||||||||||||| |  ||||||||| |||||   ||||||| ||| | || |||||| ||||| ||||||  | || ||||||||||||||     
51492130 gtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagccttttttcagccagattttacctgtaatta 51492229  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||| |||||||| |||| | |||||||||| ||||||   ||||| ||||  || ||||||||| ||||||||||||||||||||||||    
51492230 aaccagagcatttcgaaaggcaaaataattcatacaacattaaaactcgaacataaacaagataagtacaatatcttttacaattgtccataattaaatc 51492329  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
51492330 aaaccgacatttggttcaaattacacaaacgtttgaaattcat 51492372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 775 - 948
Target Start/End: Complemental strand, 11506831 - 11506659
Alignment:
775 cattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaa 874  Q
    ||||||||||||||| ||||||||| ||||||||| || | |||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||    
11506831 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 11506732  T
875 cataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||||||||| |||   |||||| |||| ||||||||||||||||||||| |||||||||||||    
11506731 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttcca-tgcgtattcatct 11506659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 489 - 735
Target Start/End: Original strand, 19069246 - 19069492
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  |||||||||||||||| | |||||||||||| || |||||| ||||||||||| |||| ||||||||| |||||||    
19069246 gtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattgtaaa-catttccaagccattttttcgaccagtttttacttgtaatt 19069343  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || || |||||| ||||||||||| |||||||||||    
19069344 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtaaaatatcttttacaattgttcataattaaat 19069443  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaat 735  Q
     |||||||||||||||| ||| || ||||| ||||||||||||| ||||    
19069444 taaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaat 19069492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 489 - 730
Target Start/End: Original strand, 15995781 - 15996022
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  |||||||||||||||| | |||||||||| | || |||||| ||||||||||| || | |||||||||||||||||    
15995781 gtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaatt 15995878  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| ||| || | |||||  |||  || ||||||||| ||||||||||| |||||||||||    
15995879 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaagtcggacataatgaagataagtacaatatcttttacaattgttcataattaaat 15995978  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
     |||||||||||||||| ||| || ||||| |||||||||||||    
15995979 taaaccgacatttggttaaaattaaacaaacgtttgaaattcat 15996022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 491 - 889
Target Start/End: Complemental strand, 30043434 - 30043046
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||| |||||||||||||||||||||| | | || ||||||||||  || ||      ||||||||| |||| ||||||||| || |||| |||    
30043434 agttaactgctgaggaaaacaattatgcagacaataggttttgcataattg--aacca------agccatttt-cgaccagtttttacatgaaattcaac 30043344  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||||||||| | ||||||||  | |  ||||||||||| ||| |||||||| |||| |||||  | |||| ||||||||| ||||||||||||||||     
30043343 cagagcatttcaagaggcaatactattcgtacaacatttatactaagtcataaacaagaaaaatgtattatcttttacaattatccataattaaatcaat 30043244  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||| |   ||| ||| |||||  | |||||||||| || ||| | ||| | |||| ||||   ||||||||||| |||||| ||||||| ||| ||||    
30043243 ccgacgtagagttaaaattacacggatgtttgaaatttatcaaaacattaaagagtg-ccataattaaacaacacactacaacacattacatatcgttaa 30043145  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtc 889  Q
    || ||||| ||  | |||| | | | | ||||| |||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
30043144 atgaaatctctggtgacattctatgaagttgcaaatggaacgaaaatacaaatataatatattatcttccaccatattctgaaacataaatccgacgtc 30043046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 504 - 661
Target Start/End: Original strand, 24414909 - 24415066
Alignment:
504 ggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttcca 603  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||| |||   ||||||||||||||||| ||||||| ||||||||    
24414909 ggaaaacaattatgcagacagtgggttctgcataattctaaagcatttccaagccatttatcggacagtttttacctgtaattaaaccagaacatttcca 24415008  T
604 aaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatat 661  Q
    |||  ||||||||| | | |||||||||||||| ||||||||||| ||||||||||||    
24415009 aagataatataactcagaaaacatttaaactcaatcataagcaagaaaaatacaatat 24415066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 491 - 730
Target Start/End: Original strand, 44674199 - 44674438
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||||||||||||||| |  ||||||||| |||||   ||||||| ||| | || |||||| ||||| ||||| | | ||||||  ||||||||| ||    
44674199 agttaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagcctttttttggccagttttc-cctgtaattaaa 44674297  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
     ||||||||||| |||||||| | || | |||||||||| |||||| | ||||| ||||  || ||||||||| ||||||||||||||||||||||||||    
44674298 tcagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataagtacaatatcttttacaattgtccataattaaatcaa 44674397  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||||||||||| ||||||||  ||| ||||||||    
44674398 accgacatttggttcaaattacacaaacatttaaaattcat 44674438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 489 - 730
Target Start/End: Original strand, 37015957 - 37016199
Alignment:
489 gtagttaactgccgaggaaaac-aattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||| |||||| | ||||||| || |||||   ||||||| ||| | || |||||  ||| | ||||||  | |||||||||||||||||     
37015957 gtagttaactgcccaggaaatctaattatggaggcagtgagctctgcatcattctaaaacattttcaagtcttttttcagccagtttttacctgtaatta 37016056  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||| |||||||| | || | ||||| |||| |||||| | ||||| ||||  |||||||||||| ||||||||||||||||||||||||    
37016057 aaccagagcatttcgaaaggcaaaacaattcatacatcattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatc 37016156  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||| ||| |||| |||||| |||| ||| |||||||||||||    
37016157 aaactgacgtttgattcaaattacagaaacgtttgaaattcat 37016199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 21472623 - 21472566
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
21472623 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttg 21472566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 44561469 - 44561412
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
44561469 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgattttg 44561412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 34154541 - 34154469
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||| ||  |||||||||    
34154541 gaaaattgttgttgacacatttcataaggctgagaaacacgggtaaaatacatttttgtcccatcggcagtta 34154469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 403 - 457
Target Start/End: Complemental strand, 6283573 - 6283518
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgt 457  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||    
6283573 aattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgt 6283518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 24417554 - 24417503
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacg 450  Q
    |||||||||||||||||||| |||||| ||||||| ||| ||||||||||||    
24417554 gaaaattgttgttgacacatatcataacgctgagacacacgagtaaaatacg 24417503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 455
Target Start/End: Complemental strand, 37959858 - 37959803
Alignment:
401 aaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgttttt 455  Q
    |||||||||||||||||||| ||||| ||||||  ||| |||||||||||||||||    
37959858 aaaattgttgttgacacattacataaggctgaggcacacgagtaaaatacgttttt 37959803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 958732 - 958674
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgt 457  Q
    |||||||| ||||||||||||| |||| ||||||  |||| ||||||||||||||||||    
958732 gaaaattgatgttgacacattttataaggctgaggcacataagtaaaatacgtttttgt 958674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 29700441 - 29700383
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgt 457  Q
    ||||||||||||||||||||||||||| ||||||  |||  ||||||||||| ||||||    
29700441 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgt 29700383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 508 - 566
Target Start/End: Original strand, 51642096 - 51642154
Alignment:
508 aacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcg 566  Q
    |||||||||||||| ||||| |||||||||||| | ||||||||  || ||||||||||    
51642096 aacaattatgcagatagtgggttctgcataattttaaagcattttcaaaccatttttcg 51642154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 467
Target Start/End: Original strand, 11494481 - 11494546
Alignment:
403 aattgttgttgacacatttcataagc-tgagaaacatgagtaaaatacgtttttgttcccacggca 467  Q
    ||||||||| ||||||||| | |||  ||||||||| ||||||||||||||||||| ||| |||||    
11494481 aattgttgtcgacacatttgaaaagggtgagaaacacgagtaaaatacgtttttgtcccctcggca 11494546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 51426468 - 51426529
Alignment:
397 ttggaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgt 457  Q
    ||||||||||||||||||||| |||||||| ||| ||  |||  ||||||||||||||||||    
51426468 ttggaaaattgttgttgacacgtttcataaggcttaggcacacaagtaaaatacgtttttgt 51426529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 368; Significance: 0; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 1656103 - 1655645
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||||||||||||| | |||||||||||||||||||    
1656103 gtagttaactgccgaggaaaacatttatgcagacagtgggttctgcataattgttaagcactttcaagccatttttcggccagtttttacctgtaattta 1656004  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    | |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
1656003 atcagagcatttccaaaggcaatataacttatacaacatttaaatttagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatca 1655904  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
1655903 aacggacatttggttcaaaatacacaaaagtttgaaattcatcaaatcgttacatagtatccatgcataaacaacacattacaactcattacacatcatt 1655804  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
1655803 aaattaaatcattacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 1655704  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||    
1655703 cgctatcgtcgcgaataagccaagacatatagcttgccgttttcca-tgcgtattcatct 1655645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 13178144 - 13177691
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||||||| |||||| ||||||| ||||||| |||||||||||| | ||||| ||| ||||||||||| ||| |||||||||||||||||||||    
13178144 agttaactgccgagaaaaacatttatgca-acagtgggttctgcataattataaagcacttccaagccattttttgaccagtttttacctgtaatttaac 13178046  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    |||||||||||||||||||||||||||||||  |  ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||    
13178045 cagagcatttccaaaggcaatataacttatatta--tttaaactcagtcataaacaagtaaaatataatatcttttacaattgtccataattaaatcaaa 13177948  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||||||||||| |||||    
13177947 ccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacatagtgtccatagttaaacaacacattacaactcattacacattattaa 13177848  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
13177847 attaaatccctacttactttcaatgcaattgcatatggaatgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcg 13177748  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||| || | ||||||||||||||||||||||||||||||| |||||||||||||    
13177747 ctatcgttgcgattaagccaagccatatagcttgccgttttcca-tgcgtattcatct 13177691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 314; E-Value: 1e-176
Query Start/End: Original strand, 491 - 931
Target Start/End: Original strand, 19495101 - 19495544
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||| | ||||||||||||||||| |||    
19495101 agttaactgccgagaaaaactattatgcagacagtgggttctgcataattgttaagcatttccaagctatttttcggccagtttttacctgtaattaaac 19495200  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||||||||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||    
19495201 cagagcatttccaaaggtaatataattcatacaacatttaaactcagtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaa 19495300  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaa---tcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    |||||||||||||||||||||||||||||||||||||||| |||     ||||||||||||||||   ||||||||||||||||| ||||||||||||||    
19495301 ccgacatttggttcaaaatacacaaaagtttgaaattcatcaaacgcgtgttacatagtgtccataattaaacaacacattacaagtcattacacatcat 19495400  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
19495401 taaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccaacg 19495500  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgtttt 931  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||    
19495501 tcgctatcgtctcgaataagccaaggcatatagcttgccgtttt 19495544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 488 - 948
Target Start/End: Original strand, 7966041 - 7966496
Alignment:
488 tgtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||| ||| |||   |||||||||||||||  |||||||||||| | ||||| ||| ||||||||||||| | ||||||||||||||||||    
7966041 tgtagttaactgctgagaaaattgattatgcagacagtgagttctgcataattctaaagcacttccaagccatttttcggccagtttttacctgtaattt 7966140  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatc-atttacaattgtccataattaaat 686  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
7966141 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatctttttacaattgtccataattaaat 7966240  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||     ||||||||||    
7966241 caaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattaca----tttacacatca 7966336  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||    
7966337 ttaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatgtaatatattatcttccaccatattccgaaacataaatctgac 7966436  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||    
7966437 gtcgctatcgtcgcgaataag-caaggcatatagcttgccgttttcca-tgcgtattcatct 7966496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 304; E-Value: 1e-170
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 25040090 - 25039646
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||    |||||||||| | |||||||||||||||||||    
25040090 gtagttaactgttgaggaaaacatttatgcagacagtgggttctgcataattgttaagcatttc----ccatttttcggccagtttttacctgtaattta 25039995  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
25039994 accagaacatttccaaagacaatataacttgtacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatca 25039895  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||    
25039894 aactgatatttggttcaaaatacacaaaagtttaaaattcatcaaatcgttacatagtgtccatgcataaacaacacat----------tacacatcatt 25039805  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
25039804 aaattaaatccctacttacattcaacgcaattgtatatggaacgaacatacacatataatatattatcttccaccatattccgaaacataaatccgacgt 25039705  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    || ||||| ||| ||||||||||| | ||||||||||||||||||| |||||||||||||    
25039704 cgttatcgacgcgaataagccaaggcgtatagcttgccgttttcca-tgcgtattcatct 25039646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 489 - 947
Target Start/End: Original strand, 36072428 - 36072879
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||||||  |||   |||||||||||||||| |||||||||||| | ||||||||  ||  ||||||||||    ||||||||||||         
36072428 gtagttaactgccgaaaaaactgattatgcagacagtggattctgcataattctaaagcattttcaaatcatttttcgaaatttttttacctgta----- 36072522  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
     ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
36072523 -ccagaacatttccaaaggcaatataacttatacaacagttaaactcagtcataaacaagtaaaatacaatatcttttacaattgttcataattaaatca 36072621  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||  ||||||||| |||||||||||||||||||||||    
36072622 aaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacattagatagtgtccatgattaaacaacatattacaactcattacacatcatt 36072721  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
36072722 aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 36072821  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatc 947  Q
    ||||||| ||   ||| ||||||| |||||||||||  |||||||| ||||||||||||    
36072822 cgctatcatcttcaattagccaaggcatatagcttgttgttttcca-tgcgtattcatc 36072879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 8459019 - 8459465
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||| |||    
8459019 agttaactgccgaggaaaacaattatgcagacagtgggttctgcataattctaaagcatttctaagccatttttcgaccagtttttacctgtaattaaac 8459118  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    || |||||||||||||||||||||| | |||||||||| |||||  ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
8459119 catagcatttccaaaggcaatataaatcatacaacattgaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaa 8459218  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||| ||||| | |||||||||   |||          |||||||||||||||| |||||    
8459219 ccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttaaaaagtgtccataattaa----------acaactcattacacatgattaa 8459308  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||||||    
8459309 attaaatccctacttacattcaacgcaattacatatagaacgaacatacatgtataatatattatcttctaccatattttgaaacataaatccgacgtcg 8459408  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||    
8459409 ctatcgtcgcgaataagccaagacatatagcttgtcgttttcca-tgcgtattcatct 8459465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 4518427 - 4517959
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||| | ||||||||  ||||||||||||| | ||||||||||||||||| |||    
4518427 agttaactgccgaggaaaacaattatggagacagtaggttctgcataattctaaagcattttcaagccatttttcggccagtttttacctgtaattaaac 4518328  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    || |||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
4518327 caaagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaa 4518228  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttaca--------------tagtgtccatgcataaacaacacattacaactca 776  Q
    ||||||||||||||||| |||||||||||||||||||||| | | |||||||               |||||||||   |||||||||||||||||||||    
4518227 ccgacatttggttcaaattacacaaaagtttgaaattcatcagaacgttacaaaatgtccataattaagtgtccataattaaacaacacattacaactca 4518128  T
777 ttacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaaca 876  Q
    ||||||||||||| ||  ||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
4518127 ttacacatcattatat--aatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattatttttcaccatattccgaaaca 4518030  T
877 taaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||| ||||| |||   ||||||||||| ||||||||||||| ||||||| |||||||||||||    
4518029 taaatccgacgttgctatagtctttaataagccaaggcatatagcttgccattttcca-tgcgtattcatct 4517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 51666677 - 51666231
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||| | |||||||   ||||||||||||| | | ||||||||||||||| |||    
51666677 agttaactgctgaggaaaacaattatgcacacagtgggttctgcataattctaaagcattctcaagccatttttcggccaatttttacctgtaattaaac 51666578  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    || |||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||  |||||||||||||||||||||||||||    
51666577 caaagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatattttacaattgtccataattaaatcaaa 51666478  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||  |||||| |||||||||   |||          |||||||||||||||||||||     
51666477 ccgacatttggttcaaattacataaaagtttgaaattcatcaaaaagttacaaagtgtccataattaa----------acaactcattacacatcattat 51666388  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
51666387 attaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaattcgacgtcg 51666288  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||   ||||||||||| ||||||||||| ||| ||||| || ||||||||||    
51666287 ctatcgtctttaataagccaaggcatatagcttgtcgtgttcca-tgtgtattcatct 51666231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 9710639 - 9711085
Alignment:
491 agttaactgccgaggaaaac-aattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||| | || |||||| |||||||||||||   ||||||||||||||||| ||    
9710639 agttaactgccgaggaaaacgaattatgcagacagtgggttctgcataattctaaa-catttccaagccatttttcggtcagtttttacctgtaattaaa 9710737  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
    | |||| ||||||||||| || |||| | |||||||||| |||||  | ||||| ||||  |||||||||||| ||||||||||||||||||||||||||    
9710738 caagagtatttccaaaggtaaaataattcatacaacattgaaactaggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaa 9710837  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatta 789  Q
    || ||||||||||||||| |||||||| ||||||||||||| |||  |||||| |||||||||   |||||||          |||||||||||||||||    
9710838 actgacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataattaaacaa----------ctcattacacatcatta 9710927  T
790 aattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtc 889  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
9710928 aattaaatccctacttacattcaacgcaattgcatatggaaagaacatacatatataatatattatctttcaccatattccgaaacataaatccgacgtc 9711027  T
890 gctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||| ||||||| ||||||| ||| |||||||||||||||||| || |||||||||||||    
9711028 gctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttca-tgcgtattcatct 9711085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 50113366 - 50113829
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    |||||||||||||||| |||||  |||||||||||||||| |||||||||||| | || |||||  || |||||||| || |||||||||| ||||||||    
50113366 gtagttaactgccgagaaaaactgattatgcagacagtgggttctgcataattctaaa-cattttcaatccattttttcggctagtttttaactgtaatt 50113464  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | ||||||| || |||||||| ||||| ||||  |||||||||||| |||||||||||||||||||||||    
50113465 aaaccagagcatttccaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaat 50113564  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa----caacacatta--caactcattac 780  Q
     |||||||||||||||| ||| |||||||| ||||||||||||| ||| | ||||| |||||||||  | |||    | | | ||||  |||||||||||    
50113565 taaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccata-acaaagtgtccata-attaaacaactcattac 50113662  T
781 acatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaa 880  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
50113663 acattattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaa 50113762  T
881 tccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||    
50113763 tctgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcca-tgcgtattcatct 50113829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 44470023 - 44469576
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||| | || |||||| ||||||||||| ||   ||||||||||||||||| |    
44470023 agttaactgccgaggaaaactgattatgcagacagtggattctgcataattctaaa-catttccaagccattttttcggtcagtttttacctgtaattga 44469925  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||| ||||||||| |||| | |||||| ||| |||||| | ||||| ||||  || ||||||||| ||||||||||| ||||||||||| |    
44469924 accagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaatta 44469825  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||||||          |||||||||||||||    
44469824 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaac----------tcattacacatcatt 44469735  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
44469734 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 44469635  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
44469634 cgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 44469576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 608 - 948
Target Start/End: Original strand, 33168082 - 33168421
Alignment:
608 caatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaa 707  Q
    |||||||| | ||||||||| |  |||||||||||| |||| |||||| | |||| |||||| ||||||||||||||||||||||||||||| |||||||    
33168082 caatataattcatacaacatctgtactcagtcataaacaaggaaaatatattatcttttacagttgtccataattaaatcaaaccgacatttagttcaaa 33168181  T
708 atacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttac 807  Q
     ||||| ||||||||||| |||| ||| |||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||||||    
33168182 gtacacgaaagtttgaaaatcatcaaaacgttacatagtgtccataattaaacaacacattacaactcattacatatcattaaattaaatccctacttac 33168281  T
808 atgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataag 907  Q
    |  |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||    
33168282 actcaacgcaattacatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatctgacgtcgctatcgtctaaaataag 33168381  T
908 ccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
     |||| |||||||||||  |||||||| |||||||||||||    
33168382 tcaaggcatatagcttgttgttttcca-tgcgtattcatct 33168421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 38689990 - 38690416
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| | |||||||| |||||||| |    
38689990 gtagttaactgccgaggaaaacaattatgcagacagtggtttctacataattctaaagcatttccaagccatttttcggccagtttttatctgtaattaa 38690089  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||| |||||||||||||||||                     |||||||||  ||| ||||||||||||| |||||||||||||||| ||||||||    
38690090 accagaggatttccaaaggcaatat---------------------cagtcataaataagaaaaatacaatatcttttacaattgtccatagttaaatca 38690168  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||||||||| |||||| |||||||||||||||||||||| ||| ||||||| |||||||||   ||||||||||||||||          |||||||    
38690169 aaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaacaacacattaca----------catcatt 38690258  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    | ||||||||| ||||||||| || | |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||    
38690259 atattaaatcc-tacttacattcatcacaattgcatatggaacaaacatacatatataatatattattttccaccatattttgaaacataaatccgacgt 38690357  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||   ||||||||||| ||||||||||||||||||||| |||||||||||||    
38690358 cgctatcgtctttaataagccaaggcatatagcttgccgttttcca-tgcgtattcatct 38690416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 529 - 948
Target Start/End: Complemental strand, 46979231 - 46978799
Alignment:
529 ttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatt 628  Q
    |||||||||||| | || |||||  |||| ||||||||   ||||||||| ||||||| || ||||||||||||||||||||||||| | ||||||||||    
46979231 ttctgcataattctaaaacattttcaagctatttttcggtcagtttttacttgtaattaaatcagagcatttccaaaggcaatataaatcatacaacatt 46979132  T
629 taaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattc 728  Q
     |||||| ||||||| |||| |||||| |||||| |||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
46979131 gaaactcggtcataaacaagaaaaatagaatatcttttacaattgtccataattaaatcaaacagacatttgattcaaattacacaaaagtttgaaattc 46979032  T
729 attaaatcgttacatagtgtccatg----------cataa----acaacacattacaactcattacacatcattaaattaaatccctacttacatgcaac 814  Q
    || ||| | ||||| |||||||||           |||||    |||||||||||||| |||||||||||||||| ||||||||||||||||||| || |    
46979031 atcaaaacattacaaagtgtccataattaagtgtccataattaaacaacacattacaattcattacacatcattatattaaatccctacttacattcatc 46978932  T
815 gcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagcc 914  Q
     |||||||||  ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||   ||||||||||| |    
46978931 acaattgcattaggaacgaacatacatatataatatattattttccaccatatttcgaaacataaatccgacgtcgctatcgtctttaataagccaaggc 46978832  T
915 atatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||| ||||||||| || ||||||||||    
46978831 atatagcttgtcgttttcca-tgtgtattcatct 46978799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 29352294 - 29352741
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| |||| ||||||| | || |||||| || |||||||| || | | ||||||| ||||||| |    
29352294 agttaactgccgaggaaaactgattatgcagacagtggattctacataattctaaa-catttccaaaccattttttcggccaatttttacttgtaattaa 29352392  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||| ||||||||| |||| | |||||| ||| |||||| | |||||  |||  |||||||||||| |||||||||||  |||||||||| |    
29352393 accagagcatttgcaaaggcaaaataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaatta 29352492  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||    
29352493 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcatt 29352582  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
29352583 aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 29352682  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
29352683 cgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 29352741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 30910041 - 30909594
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  ||||||||||||| || |||||||||||| | || || ||| ||||||||||| || | ||||||||||||||||| |    
30910041 agttaactgccgaggaaaactgattatgcagacagagggttctgcataattctgaa-caattccaagccattttttcggccagtttttacctgtaattaa 30909943  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  ||   || ||||||||| ||||||||||| ||||||||||| |    
30909942 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaacataagtacaatatcttttacaattgttcataattaaatta 30909843  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||| ||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||  ||          |||||||||||||||    
30909842 aaccgacgtttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaagtac----------tcattacacatcatt 30909753  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
30909752 aaattaaatccctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 30909653  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| |||||||||||| |||||||| |||||||||||||    
30909652 cgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttcca-tgcgtattcatct 30909594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 20353949 - 20353500
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
20353949 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 20353851  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     |||||||||||||||||||| ||||||| | |||||| ||| |||||| | |||||  |||  |||||||||||| ||||||||||| |||||||||||    
20353850 aaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagacaaatacaatatcttttacaattgttcataattaaat 20353751  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||| ||||||    
20353750 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattatacatca 20353661  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
20353660 ttaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgac 20353561  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
20353560 gtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 20353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 579 - 944
Target Start/End: Complemental strand, 37019319 - 37018965
Alignment:
579 ctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccat 678  Q
    |||||||| |||||||| |||| |||||| || |||| | |||||||||| |||||| |  |||| ||||  |||||||||||| |||||||||||||||    
37019319 ctgtaattaaaccagagtattttcaaaggtaaaataattcatacaacattgaaactcggatataaacaagataaatacaatatcttttacaattgtccat 37019220  T
679 aattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcatt 778  Q
    |||||||| ||||| |||||||||||||| |||||||| ||||||||||||| |||  |||||| |||||||||   ||||||||          |||||    
37019219 aattaaattaaaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataattaaacaac----------tcatt 37019130  T
779 acacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacata 878  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
37019129 acacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacata 37019030  T
879 aatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||    
37019029 aatcctatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcca-tgcgtattc 37018965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 5141872 - 5141435
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||    | | |     ||||||||||||   ||||||||||||||||| ||     
5141872 agttaactgtcgaggaaatcaattatgcagacagtgggttctgcataattc---aacct-----agccatttttcggtcagtttttacctgtaattaaag 5141781  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||| ||||| |||| ||| |||| |||| |||||| ||||||||||||||||||||    
5141780 cagaacatttccaaaggcaatataactcatacaacatttatactcaggcataaacaagaaaattaca-tatcttttacagttgtccataattaaatcaaa 5141682  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||   ||||| || ||| | || ||||||||||||||||| ||||| |||||||| ||   |||||||||||||| |           ||| ||||    
5141681 ccgacaaggggttcgaattactcgaatgtttgaaattcattaaaacgttaaatagtgtcaataattaaacaacacattatat----------atcgttaa 5141592  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    |||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||    
5141591 attaaatctctactgacattctacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacatacatctgacgtcg 5141492  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||||    
5141491 ctatcgtcgcgaataagccaacgcatatagcttgccgttttcca-tgcgtattcatct 5141435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 512 - 948
Target Start/End: Complemental strand, 13633863 - 13633437
Alignment:
512 attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttc-gactagtttttacctgtaatttaaccagagcatttccaaaggcaa 610  Q
    |||||||||||||||| |||||||||||| |  | |||||| |||||||||||| | | ||||||||||||||||| |||||||  |||||||||||| |    
13633863 attatgcagacagtgggttctgcataattctaga-catttccaagccatttttccggccagtttttacctgtaattaaaccagacaatttccaaaggcta 13633765  T
611 tataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacattt-ggttcaaaat 709  Q
     |||| | |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| |||||||||||  ||||||||||| |||| | | |    
13633764 aataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatttaaccgacattttggttaacatt 13633665  T
710 acacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacat 809  Q
    | ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||| ||||||||||||||||||||||    
13633664 aaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcaataaattaaatccctacttacat 13633575  T
810 gcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagcc 909  Q
     |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  || |||| |||||||     
13633574 tcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcatcgcgaataagca 13633475  T
910 aagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||| ||||||||||||||||||||| |||||||||||||    
13633474 aaggcatatagcttgccgttttcca-tgcgtattcatct 13633437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 38771690 - 38772139
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |    
38771690 agttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaa 38771788  T
589 accagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
    ||||||||||||||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| ||||||||||| |||||||||||    
38771789 accagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcctttacaattgttcataattaaat 38771888  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
38771889 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 38771978  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
38771979 ttaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgac 38772078  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||| |  |||||||  |||||| ||| ||||||||||||||||||||| |||||||||||||    
38772079 gtcaccgtcgtcgcggataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 38772139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 3944033 - 3944483
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
3944033 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 3944131  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||    
3944132 aaaccagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaa 3944230  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
3944231 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 3944320  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
3944321 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccg 3944420  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
3944421 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 3944483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 3993857 - 3993407
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
3993857 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 3993759  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||    
3993758 aaaccagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaa 3993660  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
3993659 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 3993570  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |    
3993569 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatctg 3993470  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
3993469 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 3993407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 588 - 948
Target Start/End: Complemental strand, 5082280 - 5081929
Alignment:
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactc--agtcataagcaagtaaaatacaatatcatttacaattgtccataattaaa 685  Q
    ||||||||||||| ||||||||| |||| | |||||| ||| ||||||  || |||||  |||  || ||||||||| ||||||||||| ||||||||||    
5082280 aaccagagcattttcaaaggcaaaataattcatacaagattgaaactctcagacataataaagataagtacaatatcttttacaattgttcataattaaa 5082181  T
686 tcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatc 785  Q
    | |||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||  ||          || |||||||||    
5082180 ttaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaagtac----------tccttacacatc 5082091  T
786 attaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccga 885  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
5082090 attaaattaaatccatatttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccga 5081991  T
886 cgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||  ||||||| ||||||| ||| |||||| |||| ||||||||| |||||||||||||    
5081990 cgtcgccgtcgtcgcgaataagcaaaggcatataccttgtcgttttcca-tgcgtattcatct 5081929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 491 - 730
Target Start/End: Complemental strand, 22346055 - 22345821
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| | | ||||||| ||||||||||||||| ||||||||||||||||| | |    
22346055 agttaactgccgaggaaaacaattatgcagacagtgggttctgcataattctaatgcatttccaagccatttttcgaccagtttttacctgtaattaagc 22345956  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||||||||||||||||||||||| | |||||||||| |||||| |     | |||| ||||||||||||| ||||||||||||||||| |||||||||    
22345955 cagagcatttccaaaggcaatataaatcatacaacattgaaactcgg-----accaagaaaaatacaatatcttttacaattgtccataagtaaatcaaa 22345861  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||||||| |||||||| |||||||||||||    
22345860 ccgacatttggttcaaattacacaaacgtttgaaattcat 22345821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 590 - 948
Target Start/End: Original strand, 12643369 - 12643713
Alignment:
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
    ||||||||||||||||||||| |||| | |||||| ||| |||||||| ||||| ||||  |||||||||||| ||||||||||||||||||||||| ||    
12643369 ccagagcatttccaaaggcaaaataattcatacaagattgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 12643468  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacat-agtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||||||||||| ||| || ||||| ||||  |||| | |   ||  ||  | |||||||||   |||||||| |||||          |||||||||    
12643469 accgacatttggttaaaattaaacaaacgttt--aattaagt--gtctataattaagtgtccataattaaacaactcatta----------cacatcatt 12643554  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
12643555 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattctgaaacataaatccgacgt 12643654  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
12643655 cgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 12643713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 589 - 948
Target Start/End: Original strand, 6558047 - 6558409
Alignment:
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |    
6558047 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 6558146  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaat--------------cgttacatagtgtccatgcataaacaacacattacaact 774  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||||              | ||||| |||||||||   ||||| || |||||||       
6558147 aaccgacatttggttaaaattaaacaaatgtttgaaattcatcaaattaaaccactcaaaacattacaaagtgtccataattaaactactcattaca--- 6558243  T
775 cattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaa 874  Q
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
6558244 -------catcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaa 6558336  T
875 cataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
6558337 cataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 6558409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 489 - 752
Target Start/End: Complemental strand, 46886402 - 46886138
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||||||| | || |||||| ||||||||||| || |||||||||||||||||||    
46886402 gtagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaagccattttttcggctagtttttacctgtaatt 46886304  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||| ||||||||||||| |||| | |||||||||| |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||    
46886303 aaaccagagcctttccaaaggcaaaataattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaat 46886204  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccat 752  Q
     |||||||||||||||| ||| |||||||| |||||||||||||  || | ||||| |||||||||    
46886203 taaaccgacatttggttaaaattacacaaacgtttgaaattcatcgaaacattacaaagtgtccat 46886138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 488 - 730
Target Start/End: Complemental strand, 52805574 - 52805332
Alignment:
488 tgtagttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatt 586  Q
    ||||||||| ||||||||||||||| |||||||||||||||  ||||||| ||| | || |||||| |||||||||||||   || ||||||||||||||    
52805574 tgtagttaattgccgaggaaaacaaattatgcagacagtgggctctgcatgattctaaa-catttccaagccatttttcggtcagcttttacctgtaatt 52805476  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     |||||||| |||||||||||||| |||| | ||| |||||| |||||| | |||||  ||| ||||||||||||| |||||||||||||||||||||||    
52805475 aaaccagagtatttccaaaggcaaaataattcatataacattgaaactctgacataaataagaaaaatacaatatcttttacaattgtccataattaaat 52805376  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
     |||||||||||||||||||| |||||||| |||||||||||||    
52805375 taaaccgacatttggttcaaattacacaaacgtttgaaattcat 52805332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 512 - 807
Target Start/End: Complemental strand, 15051338 - 15051053
Alignment:
512 attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaa 610  Q
    |||||||||||||||  |||||||||||| | || |||||| ||||||||||| || | ||||||||||||||||| |||||||||||||||||||||||    
15051338 attatgcagacagtgagttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaa 15051240  T
611 tataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaata 710  Q
     |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |||||||||||||||| ||| ||    
15051239 aataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaatta 15051140  T
711 cacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttac 807  Q
     ||||| ||||||||||||| ||| | ||||| |||||||||   |||          || ||||||||||||||||||||||||||||||||||||    
15051139 aacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa----------actactcattacacatcattaaattaaatccctacttac 15051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 547 - 730
Target Start/End: Complemental strand, 22527650 - 22527467
Alignment:
547 catttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagca 646  Q
    |||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||| |||||||| | || | |||||||||| |||||| | ||||| ||    
22527650 catttccaagccttttttcggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaaca 22527551  T
647 agtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||    
22527550 agataaatacaatatgttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcat 22527467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 530 - 730
Target Start/End: Original strand, 94498 - 94698
Alignment:
530 tctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacattt 629  Q
    ||||||| ||| | || |||||| ||| | ||||| ||| ||||||||||||||||| || ||||||||||| |||||||| | || | ||||||||||     
94498 tctgcatcattctaaaacatttccaaggctttttttgaccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaacaattcatacaacattg 94597  T
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattca 729  Q
    |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
94598 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattca 94697  T
730 t 730  Q
    |    
94698 t 94698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 491 - 728
Target Start/End: Complemental strand, 21144643 - 21144405
Alignment:
491 agttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||| ||||||||||||||| ||||| ||||||||   |||| || ||| | || |||||| ||||||||||||| | |||||||| |||||| | ||    
21144643 agttaagtgccgaggaaaacaaattatgaagacagtgagctctgtatgattctaaaacatttccaagccatttttcggccagtttttatctgtaagtaaa 21144544  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
     ||||| ||||| |||||||| |||| | |||||||||| ||||||   ||||| |||| ||||||||||||| |||||||||||| |||||||||||||    
21144543 gcagagaatttcgaaaggcaaaataattcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtctataattaaatcaa 21144444  T
690 accgacatttggttcaaaatacacaaaagtttgaaattc 728  Q
    | |||||||||||||||| |||||||| |||||||||||    
21144443 atcgacatttggttcaaattacacaaacgtttgaaattc 21144405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 572 - 730
Target Start/End: Original strand, 31780110 - 31780268
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||||||||| | |||||||||||| || ||||| | || | |||||||||| |||||| | ||||| ||||  |||||||||||| ||||||||    
31780110 tttttacctgtaattaagccagagcatttcgaatggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaat 31780209  T
672 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
31780210 tgtccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattcat 31780268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 494 - 730
Target Start/End: Complemental strand, 471079 - 470842
Alignment:
494 taactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacca 592  Q
    ||||||||||||||| |  ||||||||| |||||   ||||||| ||| | || |||||| | | | ||||||| | ||||||||||||||||| |||||    
471079 taactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaggtcttttttcggccagtttttacctgtaattaaacca 470980  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaacc 692  Q
    ||||||||| |||||||| | || | |||||||||| |||||| | ||||| ||||  || ||||||||| ||||| ||||| ||||||| |||||||||    
470979 gagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataagtacaatatcttttaccattgttcataatttaatcaaacc 470880  T
693 gacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||||| || ||||| |||||||||||||    
470879 gacatttggttcaaattatacaaacgtttgaaattcat 470842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 570 - 730
Target Start/End: Original strand, 16281838 - 16281997
Alignment:
570 agtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttaca 669  Q
    ||||||||| ||||||| || ||||||||||| |||||||| |||| | |||||||||| |||||| | ||||| |||| ||||||||||||  ||||||    
16281838 agtttttac-tgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattaaaactcggacataaacaagaaaaatacaatattttttaca 16281936  T
670 attgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||||||||    
16281937 attgtccataattaaattaaaccgacatctggttcaaattacacaaacgtttgaaattcat 16281997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 547 - 730
Target Start/End: Original strand, 19521714 - 19521897
Alignment:
547 catttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagca 646  Q
    |||||| ||||||||||| |   | |||||||||| |||| || ||||||||||| |||||||| |||| | ||||| |||| |||||| | ||||| ||    
19521714 catttccaagccattttttggtcactttttacctgcaattaaagcagagcatttcgaaaggcaaaataattcatacagcattgaaactcggacataaaca 19521813  T
647 agtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    || ||||||| ||||| |||||||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||    
19521814 agaaaaatactatatcttttacaattgtctataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcat 19521897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 554 - 729
Target Start/End: Original strand, 50617327 - 50617503
Alignment:
554 aagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaa 653  Q
    ||||||||||||| | ||||||||||||||||| || || | |||||  |||||||| |||| | |||||||||| |||||| | ||||| |||  ||||    
50617327 aagccatttttcggccagtttttacctgtaattaaagcacaacattttgaaaggcaaaataattcatacaacattgaaactctgacataaacaaaaaaaa 50617426  T
654 t-acaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattca 729  Q
      |||||||  |||||||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||    
50617427 acacaatattttttacaattgtccatatttaaattaaaccgacatttggttcaaattacacaaacgtttgaaattca 50617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 492 - 699
Target Start/End: Complemental strand, 47715089 - 47714890
Alignment:
492 gttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacc 591  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||| |||  || ||      |||||||||||| ||||||||||||| ||||| ||||    
47715089 gttaactgctgaggaaagcaattatgcagacagtgggttctgcatagttg--aacca------agccatttttcggctagtttttacctataattcaacc 47714998  T
592 agagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaac 691  Q
    |||||||||||| |  |||||| | |  ||||||||||| |||||||||||| |||  |||||||| |||| |||| |  ||||||||||| |||||| |    
47714997 agagcatttccagaaacaatattagtcgtacaacatttatactcagtcataaacaacaaaaatacattatcttttatagctgtccataattgaatcaatc 47714898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 594 - 662
Target Start/End: Original strand, 29261529 - 29261597
Alignment:
594 agcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatc 662  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
29261529 agcattttcaaaggtaatataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatc 29261597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 489 - 634
Target Start/End: Complemental strand, 23359363 - 23359217
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||| ||||||||||||||||  ||||| |||||||    |||||||||||| | || |||||| ||||||||||| || | |||||||||||||||||    
23359363 gtagtaaactgccgaggaaaactgattatacagacagcaagttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaatt 23359265  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaact 634  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||    
23359264 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaact 23359217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 19053993 - 19054050
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
19053993 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttg 19054050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 49927649 - 49927580
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||||||| | | |||||||| ||||||||||||||||||| ||| |||||||||    
49927649 aattgttgttgacacatttcatatggccgagaaacacgagtaaaatacgtttttgtcccctcggcagtta 49927580  T

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Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 13972001 - 13972055
Alignment:
403 aattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
13972001 aattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttg 13972055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 1656223 - 1656166
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||    
1656223 gaaaattgttgttgacacatttcataaggttgagaaacacgagtaaaatatgtttttg 1656166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 11183123 - 11183182
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttccc 461  Q
    ||||||||||||||||||| ||||| |||||||| | |||||||||||||||||| ||||    
11183123 aattgttgttgacacatttgataaggctgagaaatacgagtaaaatacgtttttgctccc 11183182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 36076696 - 36076641
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttt 454  Q
    |||||||| |||||||||||||||||| |||||||||||  |||||||||||||||    
36076696 gaaaattgctgttgacacatttcataaggctgagaaacacaagtaaaatacgtttt 36076641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 13178269 - 13178199
Alignment:
400 gaaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||||||||| || ||  |||||  |||||||||||||||||| |||| |||||||||    
13178269 gaaaattgttgttgacacatttcattaggctatgaaac--gagtaaaatacgtttttgctccctcggcagtta 13178199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 23276244 - 23276175
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||| || ||||| ||||| |||||||||| ||||||||||||||||||  ||| |||||||||    
23276244 aattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagtta 23276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 36911803 - 36911737
Alignment:
404 attgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagt 469  Q
    ||||||||||||||||||||||| ||||||    || ||||||||||||||||||| || |||||||    
36911803 attgttgttgacacatttcataaggctgaggcggataagtaaaatacgtttttgtttcctcggcagt 36911737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 21944520 - 21944463
Alignment:
399 ggaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgttttt 455  Q
    ||||||||||||||||||||| |||||| |||| || |||| | ||||||||||||||    
21944520 ggaaaattgttgttgacacatatcataaggctgggacacataaataaaatacgttttt 21944463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 27485008 - 27485065
Alignment:
415 cacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||  ||| |||||||||    
27485008 cacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagtta 27485065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 46973138 - 46973195
Alignment:
400 gaaaattgttgttgacacatttca-taagctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||||||||| || ||||||| |||  ||||||||||| |||||    
46973138 gaaaattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttg 46973195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 331; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 33995160 - 33994714
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||    
33995160 agttaactgccgaggaaaacatttatgcagacagtgggttatgcataattgttaagcatttccaagccatttttcggccagtttttacatgtaatttaac 33995061  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
33995060 cagaacatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaa 33994961  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||          |||||||||||||    
33994960 ccgacatttggttcaaaatacaaaaaagtttgaaattcttcaaatcgttacatagtgtccatgcataaacaacacat----------tacacatcattaa 33994871  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
33994870 attaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattaagaaacataaatccgacgtcg 33994771  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||| ||||||||||| ||||||| |||||||| |||| |||||||||||||    
33994770 ctatcgtcgcgaataagccaaggcatatagtttgccgttgtcca-tgcgtattcatct 33994714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 24053215 - 24053671
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||||||| |||||| ||||||||||||||  |||||||||||||| ||||||||  ||||||||||||| | |||||||||||||||||||||    
24053215 agttaactgccgagaaaaacacttatgcagacagtgagttctgcataattgtcaagcattttcaagccatttttcggccagtttttacctgtaatttaac 24053314  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
24053315 cagagcattttcaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattacatcaaa 24053414  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||||| |||||||||||||||||||||||||    
24053415 ccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacatattacaactcattacacatcattaa 24053514  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    |||| ||||||| |||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
24053515 attatatccctaattacattcaacgcaattgcatatagaaagaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgtcg 24053614  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||   |||  |||||| ||||||||||| ||||||||| |||||||||||||    
24053615 ctatcgtcttcaattcgccaaggcatatagcttgtcgttttcca-tgcgtattcatct 24053671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 24050086 - 24050546
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||  |||  |||||| ||||||||| ||||  |||||||||||||||||||||||| ||||||||||||| | |||||| || |||||||||    
24050086 gtagttaactatcgacaaaaacatttatgcagatagtgagttctgcataattgttaagcatttccaagccatttttcggccagttttcacatgtaattta 24050185  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
24050186 accagagcattaccaaaggaaatataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatca 24050285  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||   |||||||||||||||||||||||||||||||||    
24050286 aaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtatccataattaaacaacacattacaactcattacacatcatt 24050385  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatata--acatattatcttccaccatattccgaaacataaatccgac 886  Q
    |||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||    
24050386 aaattatatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatattatcttccaccatattctgaaacataaatccgac 24050485  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||   |||  |||||| ||||||||||||||||||||| |||||||||||||    
24050486 gtcgctatcgtcttcaattcgccaaggcatatagcttgccgttttcca-tgcgtattcatct 24050546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 546 - 944
Target Start/End: Original strand, 7796694 - 7797081
Alignment:
546 gcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagc 645  Q
    ||||||| |||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||| |||||| || |||| |    
7796694 gcatttccaagctatttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggttataaac 7796793  T
646 aagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatag 745  Q
    ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| ||    
7796794 aagaaaaatacaatatcttttataattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaag 7796893  T
746 tgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatat 845  Q
    |||||||   |||||||          ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
7796894 tgtccataattaaacaa----------ctcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatat 7796983  T
846 aacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||    
7796984 aatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttcca-tgcgtattc 7797081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 13563702 - 13564149
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||||||||||||| |||  |||||||||||||||| |||||||||||| | || |||||| ||||||||||| || ||||||||||||||||||| |    
13563702 agttaactgccgaggagaactgattatgcagacagtgggttctgcataattataaa-catttccaagccattttttcggctagtttttacctgtaattaa 13563800  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |    
13563801 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 13563900  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || ||||| ||||||||||||||||| | ||||| |||||||||   |||||||          ||||||||||||||||    
13563901 aaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattacaaagtgtccataattaaacaa----------ctcattacacatcatt 13563990  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
13563991 aaattaaatccctacttacattcaacgcaattgcatatggatcgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 13564090  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||    
13564091 cgctatcatcgcaaataagccaaggcatatagcttgccgttttcca-tgcgtattcatct 13564149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 506 - 948
Target Start/End: Original strand, 30352504 - 30352938
Alignment:
506 aaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaa 605  Q
    |||||||||||||||||||||  || ||||||||||||||||||||  ||||||||||||||  |||||||| |||||| | || |||||||||||||||    
30352504 aaaacaattatgcagacagtgaattttgcataattgttaagcattttcaagccatttttcgatcagtttttatctgtaaataaatcagagcatttccaaa 30352603  T
606 ggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttca 705  Q
     |||||||||   |||||||||||||||||||||||||  ||| ||||||||||||| ||     ||||||||||||||||||||||  |||||||||||    
30352604 tgcaatataagccatacaacatttaaactcagtcataa--aagaaaaatacaatatcttt-----ttgtccataattaaatcaaaccagcatttggttca 30352696  T
706 aaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctactt 805  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||   |||||| ||||||||||||||||||| |||| |||||||||||  |||||    
30352697 aaatacacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacagcacattacaactcattacatatcaataaattaaatctttactt 30352796  T
806 acatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaata 905  Q
    |||| ||| ||||||||||||||||  ||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||   || |    
30352797 acattcaatgcaattgcatatggaaaaaacatacatatataatatattattttccacaatattccgaaacataaatacgacgtcgctatcgtctttaaca 30352896  T
906 agccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||| |||||| ||||||||||| || ||| |||||||||    
30352897 agccaaggcatataacttgccgtttttca-tgcatattcatct 30352938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 489 - 898
Target Start/End: Original strand, 25877680 - 25878089
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||| ||||||||||||| | ||||||||||||||||| |    
25877680 gtagttaactgccgaggaaaacatttatgcagacagtgggttctgcataattctaaagcatttccaagccatttttcggccagtttttacctgtaattaa 25877779  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||| |||| ||||||||| | |||||||||| |||||  ||||||| |||| ||||||||||||| |||||||||||||||||||||||      
25877780 accagagcattttcaaaagcaatataaatcatacaacattgaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaat-- 25877877  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacaca 783  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||   |||    | | | |||  ||||||||||||||     
25877878 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacg 25877976  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatcc 883  Q
    | |||| ||||||||||||||||||  || | |||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
25877977 tgattatattaaatccctacttaca--catcacaattgcatatggaacaaacatacatatataatatattattttccaccatattccgaaacataaatcc 25878074  T
884 gacgtcgctatcgtc 898  Q
    |||||||||||||||    
25878075 gacgtcgctatcgtc 25878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 485 - 948
Target Start/End: Original strand, 27863458 - 27863911
Alignment:
485 ggttgtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgt 582  Q
    ||||| ||||||||||||||||||||  |||||||||| ||||| |||||||||||| | || |||||  ||||||||||| || | |||||||||||||    
27863458 ggttgcagttaactgccgaggaaaactgattatgcagatagtgggttctgcataattctaaa-cattttcaagccattttttcggccagtttttacctgt 27863556  T
583 aatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataatt 682  Q
    |||| ||||||| ||||||||||||||| |||| | | |||| ||| |||||| | ||||| ||||  || ||||||||| ||||||||||| |||||||    
27863557 aattaaaccagaacatttccaaaggcaaaataattcacacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataatt 27863656  T
683 aaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacac 782  Q
    |||| |||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||||||          ||||||||||    
27863657 aaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaa----------ctcattacac 27863746  T
783 atcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatc 882  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
27863747 atcattaaattaaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatatattatcttccaccatattccaaaacataaatc 27863846  T
883 cgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||| ||||||| ||||||| ||| |||||||||||||||||| || |||||||||||||    
27863847 cgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttca-tgcgtattcatct 27863911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 34122583 - 34123046
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagcca-tttttcgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||||  |||  ||||  |||||| ||||||| | |||||||||||||||||    
34122583 gtagttaactgccgaggaaaactgattatgcagacagtggattctgcataatt-ctaaatattttcaagccattttttcggccagtttttacctgtaatt 34122681  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||| ||||||||| |||| | |||||||||| |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||    
34122682 aaaccagagcattttcaaaggcaaaataattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaat 34122781  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattaca 781  Q
     |||||||||||||||||||| |||||||| ||||||||||||| |||  ||||||  |||| |||   |||    | | | |||  |||||||||||||    
34122782 taaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaaggttacaaggtgttcataattaagtgtccata-attaaacaactcattaca 34122880  T
782 catcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaat 881  Q
    |||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||    
34122881 catcattaaattaaattcatacttacattcaatgcaattgcatatggaacgaacatatatatataatatattatcttccaccatattctgaaacataaat 34122980  T
882 ccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | ||||||||||||||||| ||||||||||| |||||| ||| |||||||||| |||||||||||||    
34122981 ctgacgtcgctatcgtcgcgaataagccaaggcatataacttaccgttttcca-tgcgtattcatct 34123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 494 - 948
Target Start/End: Original strand, 28882058 - 28882496
Alignment:
494 taactgccgaggaaaac-aattatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaacc 591  Q
    ||||||||||||||||| |||||||||| |||| | |||| ||||||| | ||||||||| ||||||||||| || | ||||||||||||||||| ||||    
28882058 taactgccgaggaaaactaattatgcagccagtaggttctacataattct-aagcatttccaagccattttttcggccagtttttacctgtaattaaacc 28882156  T
592 agagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaac 691  Q
    ||||||||| |||||||||    ||  |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| ||||||||||| ||||    
28882157 agagcatttacaaaggcaa----ac--atacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaac 28882250  T
692 cgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaa 791  Q
    |||||||| ||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||||||||    
28882251 cgacatttcgttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcattaaa 28882340  T
792 ttaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgc 891  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
28882341 ttaaatccccacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgc 28882440  T
892 tatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
      ||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||    
28882441 cgtcgtcgcaaataagcaaatgcatatagcttgccgttttcca-tgcgtattcatct 28882496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 38855776 - 38856223
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||| |  | |||||| |||||||||||||   ||||||||||||||||| ||    
38855776 agttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccatttttcggtcagtttttacctgtaattaaa 38855874  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
    |||||  |||||||||||| | |||| | |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| | ||||||||| ||    
38855875 ccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcgtaattaaattaa 38855974  T
690 accgacattt-ggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||||||| |||| | | || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||    
38855975 accgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcatt 38856064  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
38856065 aaattcaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 38856164  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
38856165 cgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 38856223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 37814641 - 37815090
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttc-gactagtttttacctgtaatt 586  Q
    ||||||||||||||| |||| |  || ||||||||||||| ||||||||| || | || |||||| |||||||||||| | | |||||||||||||||||    
37814641 gtagttaactgccgaagaaatctgataatgcagacagtgggttctgcatagttctaaa-catttccaagccatttttccggccagtttttacctgtaatt 37814739  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| |||||||||||    
37814740 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaat 37814839  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
37814840 taaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 37814929  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
37814930 ttaaattaaatccctacttactttcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgac 37815029  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||  ||||||| ||| ||||||||||||||||||||| |||||||||||||    
37815030 gtcgccgtcgtcgtgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 37815090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 1039817 - 1039357
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgact-agtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||  |||||||||||  | ||  ||||| ||||||||||| |  | ||||||||||||||||| |    
1039817 agttaactgccgaggaaaactgattatgcagacagtgagttctgcataatcctaaat-atttccaagccattttttgggtcagtttttacctgtaattaa 1039719  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||| ||||||||| |||| | |||||| ||| |||||| | ||||| || |  |||||||||||| ||||||||||||||||||||||| |    
1039718 accagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataaacacgataaatacaatatcttttacaattgtccataattaaatta 1039619  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa---caacacatta-caactcattacacat 784  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||| ||   |||    ||| |  ||| |||||||||||| ||    
1039618 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtctataattaagtgtcaataatttaacaactcattacatat 1039519  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
1039518 cattaaattaaatccctacttacattcaacgcaactgcatatggtacgaacatacatatataacatattattttccaccatattcc-aaacataaatccg 1039420  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | |||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
1039419 atgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 1039357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 11029069 - 11029515
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||| |  | |||||| ||||||||||| |||| ||||||||||||||||| |    
11029069 agttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcgaccagtttttacctgtaattaa 11029167  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||  |||||||||||| | |||| | |||||| ||| |||||| ||||||| ||||  |||| ||||||| ||||||||||| ||||||||||| |    
11029168 accagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaaatta 11029267  T
689 aaccgacattt-ggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    ||||||||||| |||| | | || ||||| ||||||||||||| ||| | ||||| |||       |||||  ||      || |||||| |||||||||    
11029268 aaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtc------cataattaa------actactcatcacacatcat 11029355  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
11029356 taaattaaatccctacttacattcaacgcaattacatatgaaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 11029455  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
11029456 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 11029515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 25890053 - 25890502
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||| ||||||||||||||||  ||||||||||||     |||||||||||| | || |||||| ||||||||||| || | |||||||||||||||||    
25890053 gtagtaaactgccgaggaaaactgattatgcagacaacaagttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaatt 25890151  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  |||||||||||| | ||||||||| |||||||||||    
25890152 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttatacaattgttcataattaaat 25890251  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| ||||| |||   |||||||          ||||||||||||||    
25890252 taaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgttcataattaaacaa----------ctcattacacatca 25890341  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
25890342 ttaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattctgaaacataaatccgac 25890441  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||   ||||||| ||||||| ||| ||||| |||||| ||||||||  ||||||||||||    
25890442 gtcgacgtcgtcgcgaataagcaaaggcatatcgcttgctgttttcca-cgcgtattcatct 25890502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 491 - 890
Target Start/End: Complemental strand, 34080143 - 34079753
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||||||| |||||||||  |||||||||||||||| |||||||||||| | || |||||| ||||||||||| || | ||||||||||||||||| |    
34080143 agttaactgcagaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaa 34080045  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  || ||||||||| ||||||||||| ||||||||||| |    
34080044 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaatta 34079945  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||          ||||||||||||||||||||    
34079944 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa----------acaactcattacacatcatt 34079855  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||    
34079854 aaattaaatccttacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgccgt 34079755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 489 - 869
Target Start/End: Original strand, 7017571 - 7017941
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  |||||||||||||||| | |||||||||| | || |||||  ||||||||||| || | |||||||| ||||||||    
7017571 gtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattctaaa-cattttcaagccattttttcggccagtttttatctgtaatt 7017668  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| |||||||||||    
7017669 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaat 7017768  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||          || |||||||||||||||    
7017769 taaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa----------actactcattacacatca 7017858  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattc 869  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
7017859 ttaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattc 7017941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 772 - 948
Target Start/End: Complemental strand, 14280718 - 14280543
Alignment:
772 actcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccg 871  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    
14280718 actcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccg 14280619  T
872 aaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
14280618 aaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 14280543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 489 - 730
Target Start/End: Original strand, 38407206 - 38407447
Alignment:
489 gtagttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||||| |||||||| ||||| ||||||||   ||||||| ||| | || |||||| |||||||||| || | |||||||||||||||||     
38407206 gtagttaactgccgaagaaaacaaattatgtagacagtgagctctgcatgattctaaaacatttccaagccatttt-cggccagtttttacctgtaatta 38407304  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    || |||| |||||| |||||||| |||| | |||||||||| |||||||| ||||| |||| ||||||||||||| |||| |||||||||||||||||||    
38407305 aagcagaacatttcgaaaggcaaaataattcatacaacattgaaactcagacataaacaagaaaaatacaatatcttttagaattgtccataattaaatc 38407404  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||| ||||||||||||| |||||||| |||||||||||||    
38407405 aaaccggcatttggttcaaattacacaaacgtttgaaattcat 38407447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 489 - 714
Target Start/End: Complemental strand, 28388533 - 28388307
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||| ||||||  |||||||||||||||| |||||||||||| |||| |||||| ||||||||||| || | |||||||||||||||||    
28388533 gtagttaactgccgaagaaaactgattatgcagacagtgggttctgcataatt-ttaaacatttccaagccattttttcggccagtttttacctgtaatt 28388435  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| ||| || | ||||| |||   |||||||||||  |||||||||||||||||||||||    
28388434 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaattcggacataaacaaaataaatacaatattttttacaattgtccataattaaat 28388335  T
687 caaaccgacatttggttcaaaatacaca 714  Q
     |||||||||||||||||||| ||||||    
28388334 taaaccgacatttggttcaaattacaca 28388307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 788 - 948
Target Start/End: Complemental strand, 28387979 - 28387821
Alignment:
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
28387979 taaattaaatccctacttacaatcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacg 28387880  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||  ||||| | ||| |||||| |||| ||||||||| || ||||||||||    
28387879 tcgctatcgtcgtgaataa-caaaggcatataacttgtcgttttcca-tgtgtattcatct 28387821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 493 - 662
Target Start/End: Original strand, 4196618 - 4196788
Alignment:
493 ttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacca 592  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |||| ||||||||   | ||||||||||||||| |||||    
4196618 ttaactgccgaggaaaacaattatgcagacagtgggttctgcataattctaaagcatttccaagctatttttcggtcaatttttacctgtaattaaacca 4196717  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaag-taaaatacaatatc 662  Q
    ||||||||||||||||||||||| | |||||||||| |||||| ||||||| ||||  |||||||||||||    
4196718 gagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaaatacaatatc 4196788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 769 - 948
Target Start/End: Original strand, 4196846 - 4197022
Alignment:
769 acaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatatt 868  Q
    ||||||||||||| || |||| ||||||||||||||||||| || | |||||||||||||||||||  ||||||||||| ||||||| ||| ||||||||    
4196846 acaactcattacatatgattatattaaatccctacttacattcatcacaattgcatatggaacgaa--tacatatataatatattattttcgaccatatt 4196943  T
869 ccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||| |||||||||||||||   ||||||||||| ||| ||||||| ||||||||| ||| |||||||||    
4196944 ccgaaacataaatctgacgtcgctatcgtctttaataagccaaggcatgtagcttgtcgttttcca-tgcatattcatct 4197022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 572 - 899
Target Start/End: Original strand, 6267617 - 6267933
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||| ||||| | |||||||||||||||||||||||  | |  |||||||||||  ||||||||||| |||| |||||||| |||| |||||  |    
6267617 tttttacctataattcagccagagcatttccaaaggcaatactagtcgtacaacatttatcctcagtcataaacaagaaaaatacattatcttttaccgt 6267716  T
672 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattaca 771  Q
    | |||||||||||||||| |||||||||  || ||| | ||  || ||||||||||||| | | | ||| | |||||||||   ||||||||||||||||    
6267717 tatccataattaaatcaatccgacatttcattaaaattgcaagaatgtttgaaattcatcataacattaaagagtgtccataattaaacaacacattaca 6267816  T
772 actcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccg 871  Q
               |||||||||||||||| ||||| |||| | ||||| ||||| ||||||| || |||||||||||| ||||||||||||| |||||||||    
6267817 t----------atcattaaattaaatctctactgacattctacgcagttgcagatggaacaaaaatacatatataatatattatcttccatcatattccg 6267906  T
872 aaacataaatccgacgtcgctatcgtcg 899  Q
     ||||||||| ||||||||| |||||||    
6267907 -aacataaattcgacgtcgccatcgtcg 6267933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 818 - 948
Target Start/End: Complemental strand, 43179559 - 43179430
Alignment:
818 attgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccata 917  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||    
43179559 attgcagatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcaaacgtcgctatcgtcgcgaataagccaaggcata 43179460  T
918 tagcttgccgttttccattgcgtattcatct 948  Q
    |||||| |||||||||| ||||| |||||||    
43179459 tagcttaccgttttcca-tgcgtgttcatct 43179430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 491 - 730
Target Start/End: Complemental strand, 7762256 - 7762015
Alignment:
491 agttaactgccgaggaaaa-caattatgcagacagtggtttctgcataattgttaagcatttcaaagcc-atttttcgactagtttttacctgtaattta 588  Q
    |||||||||||||||||||   ||||||||| |||||   ||||||| ||| | || |||||  |||||  ||||||| | ||||||||||||||||| |    
7762256 agttaactgccgaggaaaattgattatgcaggcagtgagctctgcatcattctaaaacattttcaagcctttttttcggccagtttttacctgtaattaa 7762157  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||| |||||||  |||||||| | || | |||||||||| ||||||   ||||| ||||  | |||||||||| |||||||||||||||||||||||||    
7762156 accaaagcattttgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaagatagatacaatatcttttacaattgtccataattaaatca 7762057  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||||||||| |||||||| |||||||||||||    
7762056 aaccgacatttggttcaaattacacaaacgtttgaaattcat 7762015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 554 - 730
Target Start/End: Complemental strand, 41799716 - 41799541
Alignment:
554 aagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaa 653  Q
    ||||||||||||| | ||||||||||||||||| || ||||||||||| |||||||| |||| | |||||||||| |||||  | ||||| |||| ||||    
41799716 aagccatttttcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaacttggacataaacaagaaaaa 41799617  T
654 tacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||| |  ||||||||||||||||||||||| ||||||||||||| |||||| |||||||| |||||||||||||    
41799616 tacaatttt-tttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaacgtttgaaattcat 41799541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 491 - 797
Target Start/End: Complemental strand, 43179902 - 43179605
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||   |||||||||||||||| |||||||||||||  || ||      |||||||||  | | ||||||||||||||||| |||    
43179902 agttaactgccgaggaaagatattatgcagacagtgggttctgcataattg--aacca------agccattttcggtc-agtttttacctgtaattcaac 43179812  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    |||||||||| |||||||||||  | |  ||||||||||| |||| |||| || |||| |||||| | |||| |||||| ||||||||||||||  |||     
43179811 cagagcattttcaaaggcaatactagtcgtacaacatttatactcggtcaaaaacaagaaaaatatattatcttttacacttgtccataattaatacaat 43179712  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    || |||||| ||| ||| ||||| || ||||||||||||| ||| ||||| | |||||||||   |||||||||||||||||| ||||| | ||  ||||    
43179711 ccaacatttcgttaaaattacacgaatgtttgaaattcatcaaaacgttaaagagtgtccataattaaacaacacattacaacacattatatattgttaa 43179612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 615
Target Start/End: Complemental strand, 14280914 - 14280787
Alignment:
489 gtagttaactgccgaggaaaac-aattatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||| ||||||||||   ||||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
14280914 gtagttaacggccgaggaaatttaattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 14280816  T
587 taaccagagcatttccaaaggcaatataa 615  Q
     |||||||||||||||||| | |||||||    
14280815 aaaccagagcatttccaaatgtaatataa 14280787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 31094597 - 31094646
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataatt 540  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||    
31094597 agttaactgccgaagaaaacaattatgcagacagtggattctgcataatt 31094646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 18307192 - 18307260
Alignment:
403 aattgttgttgacacatttcataagctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||| ||||||||||||||||||| ||||||| | |||||||||||||||||| |||  |||||||||    
18307192 aattgatgttgacacatttcataagatgagaaatacgagtaaaatacgtttttgctccttcggcagtta 18307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 601 - 726
Target Start/End: Complemental strand, 16440317 - 16440192
Alignment:
601 ccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttg 700  Q
    |||||||||||| |||| ||||| |||||| | |||||||||| |||| | ||||||  ||  |||| ||||| ||||||||||||||| |||| ||||     
16440317 ccaaaggcaatacaactcatacaccatttataatcagtcataaacaagaacaatacataatattttagaattgaccataattaaatcaatccgatatttc 16440218  T
701 gttcaaaatacacaaaagtttgaaat 726  Q
    ||| ||| ||||| || |||| ||||    
16440217 gttaaaattacacgaatgtttaaaat 16440192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 3603284 - 3603215
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||||| |||||| |||||  |||| ||||||||||||||||| |||| || ||||||    
3603284 aattgttgttgacacattgcataaggctgaggcacataagtaaaatacgtttttgctccctcgacagtta 3603215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 24053114 - 24053186
Alignment:
400 gaaaattgttgttgacacatttcataagct-gagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||||||| | ||||| | |||| |||| | |||||||||||||||||| | |||||||||    
24053114 gaaaattgttgttgacacatatgataaggtcgagacacataaataaaatacgtttttgttctctcggcagtta 24053186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 42537133 - 42537192
Alignment:
398 tggaaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||| |||||||||| |||||||| ||||| |||||||||| ||||||||||| ||||||    
42537133 tggagaattgttgttcacacatttgataaggctgagaaacacgagtaaaatacatttttg 42537192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 18538476 - 18538402
Alignment:
398 tggaaaattgttgttgacacatttca-taagctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||||||||||||| || ||||||  |||  ||||||||||| |||||  ||| |||||||||    
18538476 tggaaaattgttgttgacacatttcattaggctgaggcacacaagtaaaatacgattttgccccctcggcagtta 18538402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 30611176 - 30611230
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||| |||||||| ||||| |||||||||| ||||||||| ||||||||    
30611176 aattgttgttcacacatttgataaggctgagaaacacgagtaaaattcgtttttg 30611230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 30612898 - 30612952
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||| |||||||| ||||| | |||||||| ||||||||||||||||||    
30612898 aattgttgttcacacatttgataaggccgagaaacacgagtaaaatacgtttttg 30612952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 33993214 - 33993271
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||| | |||||||||||||||| | ||||||| | ||||||||||||||||||    
33993214 gaaaattgcttttgacacatttcataaggttgagaaatacgagtaaaatacgtttttg 33993271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 427
Target Start/End: Original strand, 34682189 - 34682218
Alignment:
398 tggaaaattgttgttgacacatttcataag 427  Q
    ||||||||||||||||||||||||||||||    
34682189 tggaaaattgttgttgacacatttcataag 34682218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 328; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 409 - 948
Target Start/End: Original strand, 12905492 - 12906037
Alignment:
409 tgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagttag---------aatttaaaagttggttgtagttaact 498  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |||| | ||| |||||||||          |||| |||| | || || ||||||||    
12905492 tgttgacacatttcataaggctgagaaacaagagtaaaatacgcttttttcccctcggcagttaactgccgagaaattgaaaaatcggctgcagttaact 12905591  T
499 gccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcat 598  Q
    |||||| |||    ||||||||||||||  |||||||||||| | ||||||||| ||||||||||||||| |||||||||   |||||||||||||||||    
12905592 gccgagaaaactggttatgcagacagtgagttctgcataattctaaagcatttccaagccatttttcgaccagtttttac---taatttaaccagagcat 12905688  T
599 ttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatt 698  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
12905689 ttccaaaggcaatataactcatacaacatttaaactcagtcataaacaagtaaaatacaatatattttacaattgtccataattaaatcaaaccgacatt 12905788  T
699 tggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatc 798  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
12905789 tggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtcaataattaaacaacacattacaactcattacacatcattaaattaaatc 12905888  T
799 cctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtc 898  Q
    | ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
12905889 cgtacttacattcaacgcaattgcatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtc 12905988  T
899 gcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    || ||||||||||| |||||||||||  |||||||| |||||||||||||    
12905989 gcgaataagccaaggcatatagcttgttgttttcca-tgcgtattcatct 12906037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 43943748 - 43944209
Alignment:
489 gtagttaactgccgaggaaaa-caattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||||||||||| |||||||||||| | ||| || ||||||||| | ||||||||| |||||||||||||   |||||||||||||||||     
43943748 gtagttaactgccgaggaaaaacaattatgcagagaatgggttatgcataattctaaagcatttccaagccatttttcggtcagtttttacctgtaatta 43943847  T
588 aaccagagcatttccaaaggcaa--tataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaa 685  Q
    |||||||||||||||||||||||  ||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||    
43943848 aaccagagcatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaa 43943947  T
686 tcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatc 785  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
43943948 tcaaaccgacatttggttcaaattacaaaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatc 43944047  T
786 attaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccga 885  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||    
43944048 attaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatatattatattatcttccaccatattccgaaacataaatctga 43944147  T
886 cgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||| |||| ||||||||||  ||||||||||||||||||||| |||||||||||||    
43944148 cgtcgctatcatcgcgaataagccaatgcatatagcttgccgttttcca-tgcgtattcatct 43944209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 399 - 948
Target Start/End: Complemental strand, 45479934 - 45479386
Alignment:
399 ggaaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagttag---------aatttaaaagttggtt 488  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| || | |||||||||          |||| |||| | |  |    
45479934 ggaaaattgttgttgacacatttcataaggctcagaaacatgagtaaaatacgattttgctctctcggcagttaactgccgagaaattaaaaaatcgact 45479835  T
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||| ||||||| |||   |||||||||||||||| |||||||||||| | ||||||||  |||| |||||||| | ||||||||| |||||||||    
45479834 gtagttaattgccgagaaaattgattatgcagacagtgggttctgcataattctaaagcattttcaagctatttttcggccagtttttacttgtaattta 45479735  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
45479734 accagagcatttccaaaggcaatataactaatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgttcataattaaatca 45479635  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||   ||||||||||||          |||||||||||    
45479634 aaccgacatttggttcaaaatacaaaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacat----------tacacatcatt 45479545  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     
45479544 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgc 45479445  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    || ||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||    
45479444 cgatatcgtcgcgaataagccaaggcatatagcttgccgttttcca-tgtgtattcatct 45479386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 489 - 931
Target Start/End: Original strand, 28342582 - 28343015
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||| || | |||||||| | |||||||| |||||||| |    
28342582 gtagttaactgccgaggaaaacaattatgcagacagtgggttctgcataattctaaagaatttccaaactatttttcggccagtttttatctgtaattaa 28342681  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||| |||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
28342682 accagaacatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatca 28342781  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| ||||| |||   |||          |||| |||||||||||||||    
28342782 aaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgttcataattaa----------acaattcattacacatcatt 28342871  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccg-aaacataaatccgacg 887  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
28342872 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaaacataaatccgacg 28342971  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgtttt 931  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    
28342972 tcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt 28343015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 493 - 944
Target Start/End: Original strand, 41181474 - 41181914
Alignment:
493 ttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacca 592  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| | | ||||||| ||||||||||| |   ||||||||||||||||| |||||    
41181474 ttaactgccgaggaaaacaattatgcagacagtgggttatgcataattctaatgcatttccaagccattttttgggcagtttttacctgtaattaaacca 41181573  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaacc 692  Q
    ||||||||||||||||||||||| | |||||||||| |||||| |||||||  ||| ||||||||||||| |||||| ||||||||||||||||||||||    
41181574 gagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataactaagaaaaatacaatatcttttacagttgtccataattaaatcaaacc 41181673  T
693 gacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaat 792  Q
    ||||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||          ||||||||||||||||||||||||    
41181674 gacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa----------acaactcattacacatcattaaat 41181763  T
793 taaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgct 892  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
41181764 taaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgct 41181863  T
893 atcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||||||||  |||||||||  ||||||||||||||||||||| |||||||||    
41181864 atcgtcgcgtataagccaatgcatatagcttgccgttttcca-tgcgtattc 41181914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 489 - 935
Target Start/End: Original strand, 24601698 - 24602147
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||||||||||||  |||||||||||||||| |||| |||||||   ||||||||| |||||||||||||   ||||||||| |||||||     
24601698 gtagttaactgccgaggaaaactgattatgcagacagtggattctacataattcaaaagcatttccaagccatttttcggtcagtttttacttgtaatta 24601797  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
24601798 aaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatc 24601897  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacac 782  Q
    |||||||||||||||||||| |||||| | ||||||||||||| ||| ||||||| |||||||||   |||    | | | |||  ||||||||||||||    
24601898 aaaccgacatttggttcaaattacacagacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacac 24601996  T
783 atcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatc 882  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||    
24601997 atcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatc 24602094  T
883 cgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||    
24602095 cgacgttgctatcgtcgcgaataagccaaggcatatagcttgccgttttccat 24602147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 489 - 935
Target Start/End: Complemental strand, 24612416 - 24611967
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||||||||||||  |||||||||||||||| |||| |||||||   ||||||||| |||||||||||||   ||||||||| |||||||     
24612416 gtagttaactgccgaggaaaactgattatgcagacagtggattctacataattcaaaagcatttccaagccatttttcggtcagtttttacttgtaatta 24612317  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
24612316 aaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatc 24612217  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacac 782  Q
    |||||||||||||||||||| |||||| | ||||||||||||| ||| ||||||| |||||||||   |||    | | | |||  ||||||||||||||    
24612216 aaaccgacatttggttcaaattacacagacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacac 24612118  T
783 atcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatc 882  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||    
24612117 atcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatc 24612020  T
883 cgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||    
24612019 cgacgttgctatcgtcgcgaataagccaaggcatatagcttgccgttttccat 24611967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 489 - 944
Target Start/End: Complemental strand, 9660069 - 9659609
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||| | || |||||| ||||||||||||| | ||||||||||| ||||| |    
9660069 gtagttaattgccgaggaaaacaattatgcagacagtgggttatgcataattctaaaacatttccaagccatttttcggccagtttttacctttaattaa 9659970  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
9659969 accagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatca 9659870  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacaca 783  Q
    || |||||||||||| ||| |||||||| | ||||||||||| ||| ||||||| |||||||||   |||    | | | |||  |||||||||||||||    
9659869 aaacgacatttggttaaaattacacaaacgcttgaaattcatcaaaacgttacacagtgtccataattaagtgtccata-attaaacaactcattacaca 9659771  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatac--atatataacatattatcttccaccatattccgaaacataaat 881  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||  ||||| || ||||||||||||||||||||||||||||||||     
9659770 tcattaaattaaatacctacttacattcaacgcaattgcatattgaacgaacatacaaatataaaatatattatcttccaccatattccgaaacataaac 9659671  T
882 ccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
     |||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||    
9659670 tcgacgtcgctatcgtcacgaataagccaaggcatatagcttgccgttttcca-tgcgtattc 9659609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 41004587 - 41005044
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||||| | ||||||||||||||||||||  | | ||||||||||||||||| |    
41004587 gtagttaactgccgaggaaaaatattatgcagacagtggattctgcataattctaaagcatttcaaagccattttcggtc-agtttttacctgtaattaa 41004685  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||  ||||||||||||| |||||||| | |||||||||| |||||| ||||||| |||| |||||| |||||| |||||||||||| ||||||||||||    
41004686 accgaagcatttccaaagacaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataatatcttttacaattgtctataattaaatca 41004785  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||| |||||||||| ||| |||||||||||||||||||||| ||| ||||||| |||||||||   |||||||||||||||||||||||||||||||||    
41004786 aaccaacatttggtttaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaacaacacattacaactcattacacatcatt 41004885  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    | |||||||| |||||||||| || | ||||||||||||||| |||||||||||||||| |||| || || || ||||||| |||||||||||| |||||    
41004886 atattaaatcactacttacattcatcacaattgcatatggaatgaacatacatatataatatataatttttcaacatattctgaaacataaatctgacgt 41004985  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | | ||||||   ||||||||| | ||| ||||||| ||||||||| |||||||||||||    
41004986 cccaatcgtctttaataagccagggcatgtagcttgtcgttttcca-tgcgtattcatct 41005044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 491 - 932
Target Start/End: Original strand, 41052683 - 41053126
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||| | ||||||||||||||||| |||    
41052683 agttaattgccgaggaaaataattatgcagacagtgggttctgcataattctaaagcatttccaagccatttttcggccagtttttacctgtaattaaac 41052782  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||| ||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
41052783 cagagtatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaa 41052882  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacacatc 785  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||    | | | |||  |||| ||||||||||||    
41052883 ccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaattcattacacatc 41052981  T
786 attaaattaaatccctacttacatgcaacgcaattgc--atatggaacgaacatacatatat-aacatattatcttccaccatattccgaaacataaatc 882  Q
    ||||||||     ||||||||||| ||| ||||||||  |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||    
41052982 attaaatt-----cctacttacattcaatgcaattgcatatatggaacgaacacacatatataaatatattatcttccaccatattccgaaacataaatc 41053076  T
883 cgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttc 932  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||||    
41053077 cgacgtcgctatcgtcgcgaataagccaaggcatatagcttggcgttttc 41053126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 491 - 944
Target Start/End: Original strand, 1096630 - 1097087
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||| ||||||||| || ||||||||| | || |||||| ||||||||||| || | ||||||||||||||||| |    
1096630 agttaactgccgaggaaaactgattatgaagacagtgggttatgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaa 1096728  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||| | ||||| ||||  ||||||| |||| ||||||||||||||||||||||| |    
1096729 accagagcatttccaaaggcaaaataattcatacaacattaaaactcggacataaacaagataaatacagtatcttttacaattgtccataattaaatta 1096828  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa----caacacattacaactcattacacat 784  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||     ||  |    ||||||||||||| ||    
1096829 aaccgacatttggttcaaactacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgttcataattaaacaactcattacatat 1096928  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
1096929 cattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaattcg 1097028  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||||||||||||||||||||||||| |  |||||| |||||||||||||| |||||||||    
1097029 acgtcgctatcgtcgcaaataagcccaagcatataacttgccgttttcca-tgcgtattc 1097087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 7267458 - 7267009
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    |||||||||||||||||||| |  |||||||||||||||| | |||||||||||| ||||||||| ||||||||||| || | |||||||||||||||||    
7267458 gtagttaactgccgaggaaatctgattatgcagacagtgggt-ctgcataattgtaaagcatttccaagccattttttcggccagtttttacctgtaatt 7267360  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| |||||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| |||||||||||    
7267359 aaaccagagcatttccaaaggcaaaataatttatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaat 7267260  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     ||||| |||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
7267259 taaacctacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 7267170  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
7267169 ttaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgac 7267070  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||| ||||||| |||  |||||||||| ||||||||| |||||||||||||    
7267069 gtcgccgtcgtcgcgaataagcaaaggtatatagcttgtcgttttcca-tgcgtattcatct 7267009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 532 - 948
Target Start/End: Complemental strand, 439792 - 439375
Alignment:
532 tgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaa 631  Q
    ||||||||| | ||||||||| |||||||||||||   ||||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||| ||    
439792 tgcataattctaaagcatttccaagccatttttcggtcagtttttacctgtaattaaaccagcgcatttccaaaggcaatataaatcatacaacattgaa 439693  T
632 actcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatt 731  Q
    |||| ||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||     
439692 actcggtcataaacaag--aaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatc 439595  T
732 aaatcgttacatagtgtccatgcataa----acaacacattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatg 827  Q
    ||| ||||||| ||| |||||   |||     ||  |    |||||||||||||||| |||| ||||||||||| ||||||| || | ||||||||||||    
439594 aaagcgttacaaagtatccataattaagtgttcataattaaacaactcattacacatgattatattaaatccctccttacattcatcacaattgcatatg 439495  T
828 gaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccg 927  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||||||||||    
439494 gaacgaacatacatatataatatattactttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccagggcatatagcttgccg 439395  T
928 ttttccattgcgtattcatct 948  Q
    ||||||| |||||||||||||    
439394 ttttcca-tgcgtattcatct 439375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 82276 - 81815
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||| |||||||||||||||||||||| ||  |||||||||||| | ||||||||  || ||||||||||   ||||||||||||||||| |    
82276 gtagttaactgctgaggaaaacaattatgcagacaatgagttctgcataattctaaagcattttcaaaccatttttcggtcagtttttacctgtaattaa 82177  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||| ||||||| ||||| | || ||||||  |||||  ||||||| |||| ||||||||||||| ||||||||||||||| |||||||||    
82176 accagagcatttctaaaggcagtataaatcatccaacatcaaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccat-attaaatca 82078  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa----acaacacattacaactcattacacat 784  Q
    |||||||||||| |||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||     ||  |    ||||||||||||||||    
82077 aaccgacatttgattcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtgcataattaaacaactcattacacat 81978  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
     |||| ||||||| | ||||||||| || | |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||    
81977 gattatattaaatgcatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttcaaccatattccgaaacataaatccg 81878  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||| |||||||   |||||| ||||  |||||||||||||||||||| |||||||||||||    
81877 acgtcgttatcgtctttaataagtcaagggatatagcttgccgttttcca-tgcgtattcatct 81815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 495 - 948
Target Start/End: Complemental strand, 24754032 - 24753589
Alignment:
495 aactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaacca 592  Q
    ||||||||||||||||  |||||||||||||    |||||||||||| | || |||||| ||||||||||| || | ||||||||||||||||| |||||    
24754032 aactgccgaggaaaactgattatgcagacagcaagttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaaacca 24753934  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaacc 692  Q
    |||||||||||||||||| |||| | |||||| ||| |||||  | ||||| ||||  |||||||||||| ||||||||| | ||||||||||| |||||    
24753933 gagcatttccaaaggcaaaataattcatacaagattgaaactgggacataaacaagataaatacaatatcttttacaatttttcataattaaattaaacc 24753834  T
693 gacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaat 792  Q
    ||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||||||          |||||||||||||||||||    
24753833 gacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaac----------tcattacacatcattaaat 24753744  T
793 taaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgct 892  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||     
24753743 taaatccctacttacattcaacgcaattgcatatggaacaaacatacatatataatatattattttccaccatattccgaaacataaatacgatgtcgcc 24753644  T
893 atcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
     ||||||| ||||||| ||  ||||||||||||||||||||| | |||||||||||    
24753643 gtcgtcgcgaataagcaaaagcatatagcttgccgttttcca-tacgtattcatct 24753589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 39798451 - 39798005
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||| |  | |||||| ||||||||||| || | ||||||||||||||||| |    
39798451 agttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcggccagtttttacctgtaattaa 39798353  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||  |||||||||||  | |||| | |||||| ||| |||||| ||||||| ||||  |||| ||||||| ||||||||||| ||||||||||| |    
39798352 accagacaatttccaaaggttaaataattcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaaatta 39798253  T
689 aaccgacattt-ggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    ||||||||||| |||| | | || ||||| ||||||||||||| ||| | ||||| |||       |||||  ||      || ||||||||||||||||    
39798252 aaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtc------cataattaa------actactcattacacatcat 39798165  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
39798164 taaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 39798065  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
39798064 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 39798005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 512 - 948
Target Start/End: Complemental strand, 41564482 - 41564055
Alignment:
512 attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaa 610  Q
    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |||||||||||||||||||| ||    
41564482 attatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa 41564384  T
611 tataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaa 708  Q
    ||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||     
41564383 tataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaat 41564284  T
709 tacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttaca 808  Q
    || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||||||||||||||||||||||    
41564283 taaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcattaaattaaatccctacttaca 41564194  T
809 tgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagc 908  Q
    | ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
41564193 ttcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagc 41564094  T
909 caagccatatagcttgccgttttccattgcgtattcatct 948  Q
     ||| ||||||||||||||||||||| |||||||||||||    
41564093 aaaggcatatagcttgccgttttcca-tgcgtattcatct 41564055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 3795398 - 3795858
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttc-gactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| | |||||||||| | || |||||| |||||||||||  | | ||||||||||||||||| |    
3795398 agttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattctaaa-catttccaagccatttttttggccagtttttacctgtaattaa 3795495  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |    
3795496 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 3795595  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaat--------------cgttacatagtgtccatgcataaacaacacattacaact 774  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||||              | ||||| |||||||||   ||||| || |||||||       
3795596 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaactactcaaaacattacaaagtgtccataattaaactactcattaca--- 3795692  T
775 cattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaa 874  Q
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
3795693 -------catcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaa 3795785  T
875 cataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||||||  ||||| | ||||||| ||| ||||||||||||||||||||| |||||||||||||    
3795786 cataaatccgacgtcgccgtcgtcacgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 3795858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 5351746 - 5351296
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
5351746 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 5351648  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||    
5351647 aaaccagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaa 5351549  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
5351548 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 5351459  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
5351458 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccg 5351359  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
5351358 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 5351296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 10620034 - 10620482
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |    
10620034 agttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaa 10620132  T
589 accagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
    ||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||||    
10620133 accagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaat 10620231  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
10620232 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 10620321  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
10620322 ttaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgac 10620421  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
10620422 gtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 10620482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 209043 - 209493
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
209043 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 209141  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||    
209142 aaaccagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaa 209240  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
209241 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 209330  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
209331 cattaaattaaatccatacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccg 209430  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
209431 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 209493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 489 - 727
Target Start/End: Complemental strand, 25184844 - 25184606
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||| |||||| | || |||||| ||||||||||||| | ||||||||||||||||| |    
25184844 gtagttaactgccgaggaaaacaattatgtaaacagtgggttctgtataattctaaaacatttccaagccatttttcggccagtttttacctgtaattaa 25184745  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||| |||| |||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
25184744 accagagtattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatca 25184645  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaatt 727  Q
    |||||| |||||||||||| |||||||| ||||||||||    
25184644 aaccgatatttggttcaaattacacaaacgtttgaaatt 25184606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 572 - 846
Target Start/End: Complemental strand, 38950496 - 38950232
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| | |||||| ||| |||||| | |||||  |||  |||||||||||| ||||||||    
38950496 tttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaat 38950397  T
672 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattaca 771  Q
    ||| ||||||||||| |||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||          ||     
38950396 tgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa----------act 38950307  T
772 actcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatata 846  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||    
38950306 actcattacacatcattaaattaaatccctacttacattcaacacaattacatatggaacgaacatacatatata 38950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 769 - 948
Target Start/End: Complemental strand, 1150774 - 1150596
Alignment:
769 acaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatatt 868  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
1150774 acaattcattacacatcattaaattaaatcactacttacattcaatgaaattgcatatggaacgaacatacatatataatatagtatcttccatcatatt 1150675  T
869 ccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    || ||||||||||||||||||||||||||| ||||||| ||||| | ||||| ||||||||||||| |||||||| ||||    
1150674 ccaaaacataaatccgacgtcgctatcgtcacaaataaaccaaggcgtatagtttgccgttttcca-tgcgtatttatct 1150596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 491 - 730
Target Start/End: Original strand, 10825279 - 10825519
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||||||||||| ||| |  ||||||||| |||||   ||||||| ||| | || |||||| ||||  ||||||| | ||||||||||||||||| ||    
10825279 agttaactgccgagaaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagcattttttcggccagtttttacctgtaattaaa 10825378  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
    |||||||||||| |||||||| | || | |||||||||| |||||||| ||||| ||||  |||||||||||| ||||||||||||||||||||||||||    
10825379 ccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatcaa 10825478  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    || ||||||||||||||| |||||||| |||||||||||||    
10825479 acagacatttggttcaaattacacaaacgtttgaaattcat 10825519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 530 - 730
Target Start/End: Complemental strand, 39951143 - 39950943
Alignment:
530 tctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacattt 629  Q
    ||||||| ||| | || |||||| ||||| ||||||||| |||||||| |||||||| |||||||||||||| |||||||| | || | ||||||||||     
39951143 tctgcatcattctaaaacatttccaagccttttttcgaccagtttttatctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattg 39951044  T
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattca 729  Q
    |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
39951043 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattca 39950944  T
730 t 730  Q
    |    
39950943 t 39950943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 554 - 730
Target Start/End: Original strand, 32952855 - 32953031
Alignment:
554 aagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaa 653  Q
    |||||||||||||   ||||||||||||||||| || ||||||||||| |||||||| |||| | |||||||||| |||||||| ||| | |||| ||||    
32952855 aagccatttttcggtcagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcagacatcaacaagaaaaa 32952954  T
654 tacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
32952955 tacaatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcat 32953031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 558 - 730
Target Start/End: Original strand, 29398038 - 29398206
Alignment:
558 catttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaataca 657  Q
    ||||||||| | ||||||||||||||||| || ||||||||||| |||||||| |||| | |||||||||| |||||| | |||||| ||    ||||||    
29398038 catttttcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggacataagaaa----aataca 29398133  T
658 atatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||  ||||||||||||||||||||||| |||||||||||| ||||||| |||||||| |||||||||||||    
29398134 atattttttacaattgtccataattaaattaaaccgacatttagttcaaattacacaaatgtttgaaattcat 29398206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 512 - 809
Target Start/End: Original strand, 18000315 - 18000603
Alignment:
512 attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaa 610  Q
    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |||||||||||| ||||||| ||    
18000315 attatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa 18000412  T
611 tataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaa 708  Q
    ||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  |||||||||| |||||||||||||||| |||     
18000413 tataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaat 18000512  T
709 tacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttaca 808  Q
    || ||| | ||||||||||||| ||| | ||||| |||||||||   |||          || |||||||||||||||||||||||||||||||||||||    
18000513 taaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaa----------actactcattacacatcattaaattaaatccctacttaca 18000602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 843 - 948
Target Start/End: Complemental strand, 38949855 - 38949751
Alignment:
843 tataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtat 942  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||| |||||| |||||||||||||| |||||||    
38949855 tataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgccgttttcca-tgcgtat 38949757  T
943 tcatct 948  Q
    ||||||    
38949756 tcatct 38949751  T

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Target: chr2; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 632 - 752
Target Start/End: Original strand, 3206950 - 3207070
Alignment:
632 actcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatt 731  Q
    ||||| |||||| |||| || ||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||     
3206950 actcaatcataaacaagaaagatacattatcttttacaattgtctataattaaatcaaaccgacatttagttcaaagtatacaaaagtttgaaattcatc 3207049  T
732 aaatcgttacatagtgtccat 752  Q
    ||| |||| ||| ||||||||    
3207050 aaaacgttgcatggtgtccat 3207070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 554 - 730
Target Start/End: Original strand, 25613328 - 25613503
Alignment:
554 aagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaa 653  Q
    ||||||||||  | ||| || |||||||| ||| ||||| | || ||||| |||||||| |||| ||||| |||||||| |||||||||| |||| ||||    
25613328 aagccattttcagcctatttattacctgtcattcaaccacatcaattccagaggcaatacaactcatacatcatttaaaatcagtcataaacaag-aaaa 25613426  T
654 tacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||  ||| |||||||||| ||| ||||||||||| | | ||||| ||| ||| ||||  || |||||||||||||    
25613427 tacataatcttttacaattgaccaaaattaaatcaatcaggcattttgtttaaattacaagaatgtttgaaattcat 25613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 770 - 934
Target Start/End: Original strand, 25613533 - 25613697
Alignment:
770 caactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattc 869  Q
    |||| ||||||| ||||||| || ||||| ||| | |||| | | |||  |||| |||||||||||| | | |||||| ||||||||||  |  ||||||    
25613533 caacacattacatatcattacataaaatctctattgacattctatgcacatgcagatggaacgaacacaaagatataatatattatctttaattatattc 25613632  T
870 cgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttcca 934  Q
      |||||||||||| |||||||||||||| | |||||| |||| || |||||| |||||||||||    
25613633 ataaacataaatcctacgtcgctatcgtcacgaataagtcaaggcacatagctcgccgttttcca 25613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 635
Target Start/End: Complemental strand, 7189965 - 7189820
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||||||||||| |   | ||||| |||||   ||||||| ||| | || |||||| ||||| ||||||| | | ||||||||||||||| |    
7189965 gtagttaactgccgaggaaatctgat-tgcaggcagtgagctctgcatcattctaaaacatttccaagccttttttcggccaatttttacctgtaattaa 7189867  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactc 635  Q
    ||||||||||||| |||||||  | || | |||||||||| ||||||    
7189866 accagagcatttcgaaaggcagaacaattcatacaacattgaaactc 7189820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 2917617 - 2917689
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||||||||||| ||||||  |||  |||||||||||||||||  ||| |||||||||    
2917617 gaaaattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagtta 2917689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 3206842 - 3206889
Alignment:
493 ttaactgccgaggaaaacaattatgcagacagtggtttctgcataatt 540  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||    
3206842 ttaactgccgaggaaatcaattatgcagactgtgggttctgcataatt 3206889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 406 - 471
Target Start/End: Complemental strand, 43950374 - 43950308
Alignment:
406 tgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| ||||||  ||| |||||||||    
43950374 tgttgttgacacatttgataaggctgagaaacacgagtaaaatacatttttgccccctcggcagtta 43950308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 34921897 - 34921840
Alignment:
400 gaaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||| | ||||||||||||||||| | |||||||| ||||||||||||||||||    
34921897 gaaaattgctattgacacatttcataaggcagagaaacacgagtaaaatacgtttttg 34921840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 41500370 - 41500301
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||| ||||||||||||||||| | |||||||||| |||||||||||| |||||  ||| |||||||||    
41500370 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgcttttgccccctcggcagtta 41500301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 396 - 471
Target Start/End: Original strand, 25964734 - 25964810
Alignment:
396 tttggaaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||| ||||||||||  ||||||| ||||| |||||||||| |||||||||||| |||||  ||| |||||||||    
25964734 tttggagaattgttgttcccacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcggcagtta 25964810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 842 - 898
Target Start/End: Original strand, 43668499 - 43668555
Alignment:
842 atataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtc 898  Q
    |||||| ||||||||||| ||||||| || |||||||||||| ||||| ||||||||    
43668499 atataatatattatcttcaaccatatgcctaaacataaatcctacgtcactatcgtc 43668555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 45475374 - 45475446
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||| |||||||||||||||||| ||||||| |||  ||||||||||| |||||  ||| |||||||||    
45475374 gaaaattgatgttgacacatttcataaggctgagacacacaagtaaaatacgattttgccccctcggcagtta 45475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 8268887 - 8268816
Alignment:
401 aaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||||| ||||| ||||   |||| ||||||||||| |||||| ||| |||||||||    
8268887 aaaattgttgttgacacattttataagactgacgtacattagtaaaatacgattttgtcccctcggcagtta 8268816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 2648057 - 2648107
Alignment:
406 tgttgttgacacatttcataagct-gagaaacatgagtaaaatacgttttt 455  Q
    ||||||||| |||||||||||| | |||||||| |||||||||||||||||    
2648057 tgttgttgagacatttcataaggttgagaaacacgagtaaaatacgttttt 2648107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 16580482 - 16580536
Alignment:
403 aattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||| ||||| ||||||| ||| ||||||||||| ||||||    
16580482 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacatttttg 16580536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 19186683 - 19186737
Alignment:
402 aaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgttttt 455  Q
    |||||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
19186683 aaattgttgttgacacatatcataaggctgagacacacaagtaaaatacgttttt 19186737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 491 - 540
Target Start/End: Complemental strand, 38950565 - 38950515
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataatt 540  Q
    |||||||||||||||||| |  |||||||||||||||| ||||||||||||    
38950565 agttaactgccgaggaaatctgattatgcagacagtgggttctgcataatt 38950515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 41181374 - 41181443
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||| |||||||||||| |||||| |||||  ||| ||||||||||||||||||  ||| |||||||||    
41181374 aattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagtta 41181443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 317; Significance: 1e-178; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 508 - 948
Target Start/End: Complemental strand, 29667827 - 29667388
Alignment:
508 aacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaagg 607  Q
    |||| ||||||||||||||| || |||||||||   ||||| ||| ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||    
29667827 aacatttatgcagacagtgggttttgcataattccaaagcacttccaagccatttttcggccagtttttatctgtaatttaaccagagcattttcaaagg 29667728  T
608 caatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaa 707  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
29667727 caatataacttatacaacttttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaa 29667628  T
708 atacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttac 807  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
29667627 atacacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacaacacattacaactcattacacatcattaaattaaatccctacttac 29667528  T
808 atgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataag 907  Q
    || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||| | ||||||    
29667527 attcaacgcaattgcatatggaacgaacatacatatataatatattaacttccaccatattccgaaacataaatctgacatcgctatcgtcacgaataag 29667428  T
908 ccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
29667427 ccaaggcatatagcttgccgttttcca-tgcgtattcatct 29667388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 23958949 - 23959398
Alignment:
489 gtagttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    |||||||||||||||| |||||   ||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||| || ||||||||||||||     
23958949 gtagttaactgccgagaaaaactggttatgcagacagtggattctgcataattctaaagcatttccaagccatttttcgaccagattttacctgtaatta 23959048  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||    
23959049 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatattttttacaattgttcataattaaatc 23959148  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||   |||||||||          |||||||||||||    
23959149 aaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccataattaaacaaca----------cattacacatcat 23959238  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||    
23959239 taaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttacaccatattccgaaacataaatccaacg 23959338  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||    
23959339 tcgctatcgtcgtgaataagccaaggcatatagcttgccgttttcca-tgcgtattcatct 23959398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 485 - 932
Target Start/End: Original strand, 29286258 - 29286695
Alignment:
485 ggttgtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaa 584  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||| ||||||||||||| | ||||||||| |||||    
29286258 ggttgcagttaactgccgaggaaaacaattatgcagacagtaggttctgcataattctaaagcatttccaagccatttttcggccagtttttacttgtaa 29286357  T
585 tttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
    || ||||||||||||| |||||||||||||| | ||||||| || |||||| ||| ||| |||| ||||||||||||| |||||||||||||||||||||    
29286358 ttaaaccagagcattttcaaaggcaatataaatcatacaacgttgaaactcggtcttaaacaagaaaaatacaatatcttttacaattgtccataattaa 29286457  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||          ||||||||||||||||    
29286458 atcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa----------acaactcattacacat 29286547  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
29286548 cattaaattaaacctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccg 29286647  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttc 932  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||    
29286648 acgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttttc 29286695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 491 - 935
Target Start/End: Complemental strand, 25141117 - 25140682
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||||  ||||||||||||| | |  |||||||||||||| |||    
25141117 agttaactgccgaggaaaacaattatggagacagtgggttctgcataattctaaagcattttcaagccatttttcggccaagttttacctgtaattaaac 25141018  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    |||| |||||||||||||||||||| | |||||| ||| |||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
25141017 cagaacatttccaaaggcaatataaatcatacaatattgaaactcggccataaacaagaaaaatacaatatcatttacaattgtccataattaaatcaaa 25140918  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||||||||||| || ||||| ||||||||||||| ||  ||||||| |||||||||   |||          ||||||||||||||||||||||    
25140917 ccgacatttggttcaaattaaacaaacgtttgaaattcatcaacacgttacaaagtgtccataattaa----------acaactcattacacatcattaa 25140828  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacataca-tatataacatattatcttccaccatattccgaaacataaatccgacgtc 889  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||    
25140827 attaaatccctacttacattcaacgcaattgcatatggaacgaacatacattatataatatattatctttcaccatattccgaaacataaatgcgacgtc 25140728  T
890 gctatcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||    
25140727 gctatcgtcacgaataagccaaggcatatagcttgccgttttccat 25140682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 494 - 944
Target Start/End: Original strand, 7537250 - 7537704
Alignment:
494 taactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacca 592  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||| | ||||||||| ||||||||||||| | ||||||||||||||||| |||||    
7537250 taactgccgaggaaaactgattatgcagacagtgaattctgcataattctaaagcatttccaagccatttttcggccagtttttacctgtaattaaacca 7537349  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaacc 692  Q
    ||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||    
7537350 gagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaacc 7537449  T
693 gacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacacatcat 787  Q
    ||||||||||| ||| |||||||| |||||||||||||  || | ||||| |||||||||   |||    | | | |||  |||| ||||| ||||||||    
7537450 gacatttggttaaaattacacaaacgtttgaaattcatctaaacattacaaagtgtccataattaagtgtccata-attaaacaaatcattgcacatcat 7537548  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
7537549 taaattaaatccctacttacattcaacgcaaatgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 7537648  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||||||||||||| ||||||||||| |||||| ||||| |||||||| |||||||||    
7537649 tcgctatcgtcgcgaataagccaaggcatataacttgctgttttcca-tgcgtattc 7537704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 493 - 935
Target Start/End: Complemental strand, 18610242 - 18609810
Alignment:
493 ttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacca 592  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||| | ||||||||| |||||||||||||   ||||||||| ||||||| |||||    
18610242 ttaactgccgaggaaaacaactatgcagatagtgggttctgcataattctaaagcatttccaagccatttttcggtcagtttttacatgtaattaaacca 18610143  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaacc 692  Q
    |||||||| |||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||    
18610142 gagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaacc 18610043  T
693 gacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaat 792  Q
    ||||| |||||| || |||||||| ||||||||||||| ||| ||||||| |||||||||   |||          |||||||||||||||| |||| ||    
18610042 gacatctggttcgaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa----------acaactcattacacatgattatat 18609953  T
793 taaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgct 892  Q
    ||||||||||||||||| || | |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
18609952 taaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatataattttccaccatattccgaaacataaatccgacgtcgct 18609853  T
893 atcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    ||||||   ||||||||||| |||||| |||| ||||||||||    
18609852 atcgtctttaataagccaaggcatataacttgtcgttttccat 18609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 31151076 - 31150630
Alignment:
491 agttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    ||||||||||| |||||||||| |||||||||| |||| |||||||||||| | ||  ||||| ||||||||||||| | ||||||||||| ||||| |     
31151076 agttaactgccaaggaaaacaaattatgcagactgtgggttctgcataattctaaat-atttccaagccatttttcgcccagtttttacctataattaat 31150978  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
    ||||||||||||||||||||| |||| | |||||||||| |||||| | ||||| ||||  |||||||||||| ||||||||||||||||||||||||||    
31150977 ccagagcatttccaaaggcaaaataattcatacaacattgaaactcggacataaacaaggtaaatacaatatcttttacaattgtccataattaaatcaa 31150878  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatta 789  Q
    ||||||||||||||| || |||||||| ||||||||||||| ||| ||||||| |||||||||   |||          |||||||||||||||||||||    
31150877 accgacatttggttccaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa----------acaactcattacacatcatta 31150788  T
790 aattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtc 889  Q
    |||||||||||||| ||||| |||||||||||||||| || | ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||    
31150787 aattaaatccctacatacattcaacgcaattgcatatcgatcaaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtc 31150688  T
890 gctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||  ||||||||||||    
31150687 gctatcgtcgcgaataagccaaggcatatagcttgccgttttcca-agcgtattcatct 31150630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 489 - 944
Target Start/End: Original strand, 2051087 - 2051545
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||| |||| |||||||||||||||||||||||||| || ||||||||| | | ||||||  |||| |||||||| | |||||||| |||||||| |    
2051087 gtagttatctgcagaggaaaacaattatgcagacagtgggttatgcataattctaatgcattttcaagcaatttttcggccagtttttatctgtaattaa 2051186  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    | ||||||||||||||||||||||||| | |||||||||| ||||||  |||||| |||| ||||||||||||| |||||| ||||||||||||||||||    
2051187 aacagagcatttccaaaggcaatataaatcatacaacattgaaactcgatcataaccaagaaaaatacaatatcttttacagttgtccataattaaatca 2051286  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa----caacacattacaactcattacacat 784  Q
    ||||||||||| ||||||| |||||||| ||||||||||||| ||| || || | |||||  ||   |||     ||  |    ||||||||||||||||    
2051287 aaccgacattttgttcaaattacacaaacgtttgaaattcatcaaaacgataaaaagtgttaataattaagtgttcataattaaacaactcattacacat 2051386  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
2051387 cattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatccg 2051486  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||||||| |||||||| ||||||||||| |||||| |||||||||||||| |||||||||    
2051487 acgtcgccatcgtcgcgaataagccaagacatataacttgccgttttcca-tgcgtattc 2051545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 490 - 948
Target Start/End: Complemental strand, 28362744 - 28362282
Alignment:
490 tagttaactgccgaggaaaaca--attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||| ||||||| |   ||||||||| |||||  |||||||||||| | || |||||| ||||||||||||| | |||||||||||||||||     
28362744 tagttaactgcagaggaaatctggattatgcaggcagtgtgttctgcataattctaaa-catttccaagccatttttcggccagtttttacctgtaatta 28362646  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||||||||| ||||||| | ||| |||||| |||||| ||||||| |||| ||||||||||||| |||||| ||||| | ||||||||     
28362645 aaccagagcatttccaaaggtaatataaatcatataacattgaaactcggtcataaacaagaaaaatacaatatcttttacagttgtctaaaattaaatt 28362546  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa----caacacattacaactcattacaca 783  Q
    |||||||||||||||||||| |||||||  | ||||||||||  ||| ||||||| ||||| |||   ||||    || ||    |||||||||||||||    
28362545 aaaccgacatttggttcaaattacacaaccgattgaaattcaacaaaacgttacaaagtgttcataattaaatgtccatcattaaacaactcattacaca 28362446  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatcc 883  Q
    |||||||||||||||||||| ||||| | || ||||||||||| || ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
28362445 tcattaaattaaatccctacatacattctacacaattgcatatcgatcgaacatacatatataatatattatcttccaccatattctgaaacataaattc 28362346  T
884 gacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||||||| ||| |||||||||    
28362345 gacgtcgctatcatcgcaaataagccaaggcatatagcttgccattttcca-tgcttattcatct 28362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 1608353 - 1608802
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |    
1608353 agttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaa 1608451  T
589 accagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
    ||||||||||||||||| | ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| ||||||||||| |||||||||||    
1608452 accagagcatttccaaaagtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaat 1608551  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
1608552 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 1608641  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
1608642 ttaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgac 1608741  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
1608742 gtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 1608802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 772 - 948
Target Start/End: Original strand, 13382974 - 13383149
Alignment:
772 actcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccg 871  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
13382974 actcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccg 13383073  T
872 aaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||||||||||  ||||||| ||||||| ||| |||||| |||| ||||||||| |||||||||||||    
13383074 aaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgacgttttcca-tgcgtattcatct 13383149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 502 - 766
Target Start/End: Complemental strand, 26702702 - 26702448
Alignment:
502 gaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttc 601  Q
    |||||||||||||||||||||||||| |||||||||||| | ||||         |||||||||||| | ||||||| ||||||| || |||||||||||    
26702702 gaggaaaacaattatgcagacagtgggttctgcataattctaaagc---------ccatttttcgaccaatttttacatgtaattaaatcagagcatttc 26702612  T
602 caaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttgg 701  Q
    |||||||| ||||| | |||||||||  ||| || ||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
26702611 caaaggcagtataaatcatacaacatagaaattcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaat-aaaccgacatttgg 26702513  T
702 ttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacaca 766  Q
    |||||| |||||||||||||||||||||| ||| ||||||| |||||||||   |||||||||||    
26702512 ttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaacaacaca 26702448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 489 - 730
Target Start/End: Complemental strand, 11840264 - 11840022
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    |||||||||||||||||||| |  ||||||||| |||||   ||||||||||| | || |||||| ||||||||||||| | |||||||||||||||||     
11840264 gtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcataattctaaaacatttccaagccatttttcggccagtttttacctgtaatta 11840165  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    ||||||| ||||||||||||||| |||| | |||||||||| ||||||   ||||| ||||  |||||||||||| ||||||||||| ||||||||||||    
11840164 aaccagaacatttccaaaggcaaaataattcatacaacattgaaactcgaacataaacaagataaatacaatatcttttacaattgttcataattaaatc 11840065  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||| |||||| |||||||| |||||||||||||    
11840064 aaaccgacatttgattcaaattacacaaacgtttgaaattcat 11840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 489 - 735
Target Start/End: Original strand, 13382688 - 13382933
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||||||||||||  |||||||||||||||| | |||||||||||| || |||||| ||||||||||||||| |||||||||||||||||     
13382688 gtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattgtaaa-catttccaagccatttttcgaccagtttttacctgtaatta 13382785  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    ||||||||||||||||||||||| |||| | ||||||  || |||||| | |||||  |||  || ||||||||| ||||||||||| |||||||||||     
13382786 aaccagagcatttccaaaggcaaaataattcatacaagtttgaaactcggacataataaagataactacaatatcttttacaattgttcataattaaatt 13382885  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaat 735  Q
    |||||||||||||||| ||| || ||||| ||||||||||||| ||||    
13382886 aaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaat 13382933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 682 - 948
Target Start/End: Original strand, 2259338 - 2259592
Alignment:
682 taaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattaca 781  Q
    ||||| |||||||||||||||||||||| |||||||  ||||||||||| ||| |||||||||||||||||   ||||||||||||||||||| ||||      
2259338 taaatgaaaccgacatttggttcaaaatgcacaaaatgttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacaacttatta-- 2259435  T
782 catcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaat 881  Q
            |||||||||| ||||||||| ||||| | ||||||||||||| ||||| ||||||||| ||||||| |||||||||||| ||||||||||||    
2259436 --------aattaaatccttacttacattcaacgta-ttgcatatggaacaaacatgcatatataatatattattttccaccatatttcgaaacataaat 2259526  T
882 ccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | ||||||||| |||||   ||||||||||  ||||||||||| ||||||| | |||||||||||||    
2259527 ctgacgtcgctttcgtctttaataagccaatgcatatagcttgtcgttttcta-tgcgtattcatct 2259592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 491 - 912
Target Start/End: Original strand, 34230550 - 34230953
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||| |||  ||| |||||||||||||||||| |||||||||||||  ||      |||||||||||| || | ||||||||||| ||||| |||    
34230550 agttaactgtcgaaaaaaccaattatgcagacagtggattctgcataattg--aa------caaagccatttt-cggccagtttttacctataattcaac 34230640  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||  |||| ||||||||||   | |  ||||||||||| ||||||||||||  ||  |||||||| |||| |||||||||||| ||||||||||||||    
34230641 cagattatttgcaaaggcaattatagtcgtacaacatttatactcagtcataaagaataaaaatacattatcttttacaattgtctataattaaatcaaa 34230740  T
691 ccgacatttggttcaaaatacacaaaag-tttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatta 789  Q
    ||||||||| ||| ||| ||||  || | |||||||||||| ||| | ||| | |||||||||   |||||||||||||          ||||||| |||    
34230741 ccgacatttcgttaaaattacatgaatgctttgaaattcatcaaaacattaaagagtgtccataattaaacaacacatt----------acacatcgtta 34230830  T
790 aattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtc 889  Q
    ||||||||| ||||| |||| | || || ||||| ||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||| ||||||    
34230831 aattaaatctctactaacattctacacagttgcagatggaacgaacatacatatataatatattatcttctaccatattctaaaacataaatcggacgtc 34230930  T
890 gctatcgtcgcaaataagccaag 912  Q
     ||||| ||   |||||||||||    
34230931 actatcctcttgaataagccaag 34230953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 491 - 684
Target Start/End: Original strand, 2258347 - 2258540
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    ||||||||  |||| |||||||||||||||||||||  |||||||||||| | ||| ||||  ||| ||||||||    || |||||| ||||||| |||    
2258347 agttaactatcgagaaaaacaattatgcagacagtgaattctgcataattctaaagaattttcaagtcatttttcagtcagattttacttgtaattaaac 2258446  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
2258447 cagagcattttcaaaggcaatataactcatacaacatttaaactcagtcataaacaagaaaaatacaatatcttttacaattgtccataattaa 2258540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 489 - 752
Target Start/End: Complemental strand, 18351657 - 18351393
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||| |||| |  |||||||||||||||| |||||||||||| | || ||||||  |||||||||| || | |||||||||||||||||    
18351657 gtagttaactgccgaagaaatctgattatgcagacagtgggttctgcataattctaaa-catttccgagccattttttcggccagtttttacctgtaatt 18351559  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||| ||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| |||||||||||    
18351558 aaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaat 18351459  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccat 752  Q
     |||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||    
18351458 taaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 18351393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 560 - 730
Target Start/End: Complemental strand, 3502606 - 3502436
Alignment:
560 tttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaat 659  Q
    ||||||| |||||||||||||||||||  ||||||||||||| |||||||| | || | |||||||||| |||||  | ||||| ||||  |||||||||    
3502606 tttttcggctagtttttacctgtaattacaccagagcatttcaaaaggcaaaacaattcatacaacattgaaacttggccataaacaagataaatacaat 3502507  T
660 atcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
3502506 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcat 3502436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 570 - 707
Target Start/End: Original strand, 8304578 - 8304715
Alignment:
570 agtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttaca 669  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||| || |||||||||||  |||||||||||| |||| |||||||| |||| ||||||    
8304578 agtttttacatgtaattaaaccagagcatttccaaagccaatatacctcatacaacatttgcactcagtcataaacaagaaaaatacattatcttttaca 8304677  T
670 attgtccataattaaatcaaaccgacatttggttcaaa 707  Q
    ||||||||||||||||||||||||||||||||||||||    
8304678 attgtccataattaaatcaaaccgacatttggttcaaa 8304715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 489 - 730
Target Start/End: Complemental strand, 31771755 - 31771512
Alignment:
489 gtagttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcga-ctagtttttacctgtaatt 586  Q
    |||||||| |||||||||||| || ||||||||||| ||   ||| ||| ||| | || |||||| |||||||||||  | | | ||||||||| |||||    
31771755 gtagttaattgccgaggaaaataaattatgcagacaatgaactcttcatgattctaaaacatttccaagccattttttcagccattttttacctttaatt 31771656  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||  ||| |||||| |||||||| |||| | |||||||||| |||||| | ||||| |||| ||||||||||||  ||||||||||| |||||||||||    
31771655 aaagtagatcatttcgaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaaaatacaatattttttacaattgttcataattaaat 31771556  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
     |||||||||||||||||||| |||||||| |||||||||||||    
31771555 taaaccgacatttggttcaaattacacaaacgtttgaaattcat 31771512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 572 - 781
Target Start/End: Complemental strand, 20448717 - 20448508
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    |||||| |||||||| ||||||||||||| || ||||||||||||| ||||| |||||| ||| |||||||| |||| | |||||| |||| |||||| |    
20448717 tttttatctgtaattcaaccagagcatttacagaggcaatataactcatacaccatttatacttagtcataaacaagaagaatacattatcttttacagt 20448618  T
672 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattaca 771  Q
    |||||||||||||||||| ||||||||| ||| ||| || |  || ||||||||||||| ||| | ||| | |||||||||   ||||||||||||| ||    
20448617 tgtccataattaaatcaatccgacatttcgttaaaattagaggaatgtttgaaattcataaaaacattaaagagtgtccataattaaacaacacatttca 20448518  T
772 actcattaca 781  Q
      ||||||||    
20448517 tatcattaca 20448508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 572 - 752
Target Start/End: Complemental strand, 20439935 - 20439755
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||||| ||| |||||||||||||||| |||||||| |||| ||||| |||||| ||| |||||||| ||||   |||||| |||| |||||| |    
20439935 tttttacctgttattcaaccagagcatttccagaggcaatacaactcatacaccatttatacttagtcataaacaagaggaatacattatcttttacagt 20439836  T
672 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccat 752  Q
    |||||||||||||||||| ||||||||| ||| ||| ||||  || ||||||||||||| ||| | ||| | |||||||||    
20439835 tgtccataattaaatcaatccgacattttgttaaaattacaggaatgtttgaaattcatgaaaacattaaagagtgtccat 20439755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 572 - 748
Target Start/End: Original strand, 19129120 - 19129293
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||||||||| ||||| | |||||||| | |||||| |||| | ||| |||||| |||||||||||| ||||   ||| || |||| |||||| |    
19129120 tttttacctgtaattaaaccacaacatttccagatgcaataaaactcacacaccatttatactcagtcataaacaag---aatgcattatcttttacagt 19129216  T
672 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgt 748  Q
    |||||||||||||||||| | ||||||| ||| ||| ||||| || ||||||||||||| ||| | ||| |||||||    
19129217 tgtccataattaaatcaatctgacatttcgttgaaattacacgaatgtttgaaattcatcaaaacattaaatagtgt 19129293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 572 - 730
Target Start/End: Complemental strand, 20436227 - 20436069
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||||| ||| |||||||||||||||| ||  |||| || | ||||| |||||| ||| |||||||| ||||   |||||| |||| |||||| |    
20436227 tttttacctgttattcaaccagagcatttccagagaaaatacaattcatacaccatttatacttagtcataaacaagaggaatacattatcttttacagt 20436128  T
672 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||| |||||||||| |||||||||  || ||| ||||  || |||||||||||||    
20436127 tgtccatgattaaatcaatccgacattttattaaaattacatgaatgtttgaaattcat 20436069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 819 - 912
Target Start/End: Complemental strand, 20448480 - 20448388
Alignment:
819 ttgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaag 912  Q
    ||||| ||| ||| |||| |||||||||| ||||||||||| || |||| || ||||||||||   |||||||||||||| | |||||||||||    
20448480 ttgcaaatgtaacaaacacacatatataatatattatcttcaac-atatacctaaacataaatgaaacgtcgctatcgtcacgaataagccaag 20448388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 29667885 - 29667828
Alignment:
400 gaaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||  ||||||||||||||||| |||||||||| |||||||||||| |||||    
29667885 gaaaattgtgtttgacacatttcataaggctgagaaacacgagtaaaatacgcttttg 29667828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 32026039 - 32026096
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| ||||||  |||  |||||||||||||||||    
32026039 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgtttttg 32026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 776 - 807
Target Start/End: Complemental strand, 18351379 - 18351348
Alignment:
776 attacacatcattaaattaaatccctacttac 807  Q
    ||||||||||||||||||||||||||||||||    
18351379 attacacatcattaaattaaatccctacttac 18351348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 472
Target Start/End: Original strand, 2405443 - 2405513
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagttag 472  Q
    |||||||||| |||| ||| ||||| |||| ||||| |||||||||||||||||  |||| ||||||||||    
2405443 aattgttgttcacacgtttgataaggctgataaacacgagtaaaatacgttttttctccctcggcagttag 2405513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 13479660 - 13479717
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| ||||||  |||  ||||||||||| |||||    
13479660 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttg 13479717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 820 - 912
Target Start/End: Original strand, 19129549 - 19129642
Alignment:
820 tgcatatggaac-gaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaag 912  Q
    |||| ||||||| ||||| |||||||||| ||||||| ||| | ||||| || ||||||||||   ||||||| |||||| | |||||||||||    
19129549 tgcagatggaacagaacacacatatataatatattatattcaatcatatgcctaaacataaatgaaacgtcgcaatcgtcacgaataagccaag 19129642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 290; Significance: 1e-162; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 10705309 - 10705765
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||||||| |||   |||||||||||||||| |||||||||||| | ||||| ||| ||| |||||||||   | ||||||| |||||||||||    
10705309 agttaactgccgagaaaactgattatgcagacagtgggttctgcataattctaaagcacttccaagtcatttttcggtcaatttttacatgtaatttaac 10705408  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
10705409 caaagcatttctaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaa 10705508  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||||||||||||||||||||||||| |||||||| |||  ||||||||||||||||   ||||||| ||||||||||||||||||||||| |||    
10705509 ccgacatttggttcaaaatacacaaaagtttaaaattcatcaaaatgttacatagtgtccataattaaacaatacattacaactcattacacatcaataa 10705608  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||    
10705609 attaaatctctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatcatcttccaccatattctgaaacataaatccgacgtcg 10705708  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||   ||| ||||||| ||||||||||| ||||||||| |||||||||||||    
10705709 ctatcgtcttcaattagccaaggcatatagcttgtcgttttcca-tgcgtattcatct 10705765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 489 - 944
Target Start/End: Original strand, 34622558 - 34623002
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||||||   ||||||||| ||||||| |    
34622558 gtagttaacagccaaggaaaacaattatgcagacagtgggttctgcataattctaaagcatttccaagccatttttcggtcagtttttacatgtaattaa 34622657  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||| |||||||  ||| ||||||||||||  |||||||||||||||||||||||||    
34622658 accagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaataagaaaaatacaatatattttacaattgtccataattaaatca 34622757  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||          ||||||||||||||||||||    
34622758 aaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa----------acaactcattacacatcatt 34622847  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||   |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
34622848 aaattaaacttctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttccatcatattccgaaacataaatccgacgt 34622947  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||    
34622948 cgctatcgtcgcgaataagccaaggcatatagcttgccgttttcca-tgcgtattc 34623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 489 - 935
Target Start/End: Original strand, 19044352 - 19044802
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||||| | | ||||||| ||||||||||||| ||||||||||||||||||| |    
19044352 gtagttaactgccgaggaaaacaattatgcagatagtgggttttgcataattctaatgcatttccaagccatttttcggctagtttttacctgtaattaa 19044451  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||| |  ||||||| |||| ||||||||||||| |||||| ||||||||||||||||||    
19044452 accagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcataaccaagaaaaatacaatatcttttacagttgtccataattaaatca 19044551  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacaca 783  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||| | ||||| |||||||||   |||    | | | |||  |||| ||||||||||    
19044552 aaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaagtgtccata-attaaacaaatcattacaca 19044650  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatcc 883  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||     
19044651 tcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatct 19044750  T
884 gacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
19044751 gacgtcgctatcgtcgcgaataagccaaggcatataacttgccgttttccat 19044802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 489 - 935
Target Start/End: Complemental strand, 20710284 - 20709834
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||||| | | ||||||| ||||||||||||| ||||||||||||||||||| |    
20710284 gtagttaactgccgaggaaaacaattatgcagatagtgggttttgcataattctaatgcatttccaagccatttttcggctagtttttacctgtaattaa 20710185  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||| |  ||||||| |||| ||||||||||||| |||||| ||||||||||||||||||    
20710184 accagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcataaccaagaaaaatacaatatcttttacagttgtccataattaaatca 20710085  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacaca 783  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||| | ||||| |||||||||   |||    | | | |||  |||| ||||||||||    
20710084 aaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaagtgtccata-attaaacaaatcattacaca 20709986  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatcc 883  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||     
20709985 tcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatct 20709886  T
884 gacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccat 935  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
20709885 gacgtcgctatcgtcgcgaataagccaaggcatataacttgccgttttccat 20709834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 47743001 - 47742554
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttc-gactagtttttacctgtaattta 588  Q
    ||||||||| ||||||||||  |||||||||||||||| |||||||||||| | || |||||| |||||||||||  | | ||||||||||||||||| |    
47743001 agttaactgtcgaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaagccatttttttggccagtttttacctgtaattaa 47742903  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||| ||||||||| |||| | |||||||||| ||||   | || || ||||  |||| ||||||| ||||||||||||||||||||||| |    
47742902 accagagcattttcaaaggcaaaataattcatacaacattgaaacatggacaaaaacaagataaatgcaatatcttttacaattgtccataattaaatta 47742803  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||| |||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   ||||||||          |||||||||||||||    
47742802 aaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaac----------tcattacacatcatt 47742713  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
47742712 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 47742613  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||| |||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||    
47742612 cgccatcgtcgcgaataagccaaggcatatagcttgtcgttttcca-tgcgtattcatct 47742554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 15070363 - 15069915
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||||||| |||||||||  |||||||||||||||| |||||||||||| |  | |||||| ||||||||||| || | ||||||||||||||| | |    
15070363 agttaactgcngaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcggccagtttttacctgtaaataa 15070265  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||| | |||| | |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| ||||||||||| |    
15070264 accagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatta 15070165  T
689 aaccgacattt-ggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    ||||||||||| |||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||||    
15070164 aaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcat 15070075  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
15070074 taaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 15069975  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
15069974 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 15069915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 515 - 948
Target Start/End: Complemental strand, 18109781 - 18109358
Alignment:
515 atgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaatat 613  Q
    ||||||||||||| |||||||||||| | || |||||| || |||||||| || | |||||||| |||||||| ||||||||||||||||||||||| ||    
18109781 atgcagacagtgggttctgcataattctaaa-catttccaaaccattttttcggccagtttttatctgtaattaaaccagagcatttccaaaggcaaaat 18109683  T
614 aacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacattt-ggttcaaaataca 712  Q
    || | |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||| |||| ||| || |    
18109682 aattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaaattaaa 18109583  T
713 caaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatgca 812  Q
    |||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||||||||||||||||||||||| ||    
18109582 caaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcattaaattaaatccctacttacattca 18109493  T
813 acgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaag 912  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||    
18109492 acgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaag 18109393  T
913 ccatatagcttgccgttttccattgcgtattcatct 948  Q
     ||||||||||||||||||||| |||||||||||||    
18109392 gcatatagcttgccgttttcca-tgcgtattcatct 18109358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 512 - 948
Target Start/End: Original strand, 603862 - 604287
Alignment:
512 attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaa 610  Q
    |||||||||||||||| |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| ||||||| |||||||||||| ||    
603862 attatgcagacagtgggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaaaccagaacatttccaaaggtaa 603960  T
611 tataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaata 710  Q
     |||| | |||||| ||| ||||||   |||||  |||  |||||||||||| ||||||||||| ||||||||||| ||| |||||||||||| ||| ||    
603961 aataattcatacaagattgaaactcgaacataatgaagataaatacaatatcttttacaattgttcataattaaattaaatcgacatttggttaaaatta 604060  T
711 cacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatg 810  Q
     ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||||||||||||||||||||||||||     
604061 aacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcattaaattaaatccctacttacatt 604150  T
811 caacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagcca 910  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |    
604151 caacgcaattacatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaa 604250  T
911 agccatatagcttgccgttttccattgcgtattcatct 948  Q
    || ||||||||||||||||||||| |||||||||||||    
604251 aggcatatagcttgccgttttcca-tgcgtattcatct 604287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 608 - 935
Target Start/End: Original strand, 12111394 - 12111719
Alignment:
608 caatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaa 707  Q
    |||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
12111394 caatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttataattgtccataattaaatcaaaccgacatttggttcaaa 12111493  T
708 atacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttac 807  Q
     ||||| ||||||| |||||||| ||| ||||| | | |||||||   ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
12111494 ttacaccaaagtttaaaattcatcaaaacgttataaattgtccataattaaacaatacattacaactcattacatatcattaaattaaatccctacttac 12111593  T
808 atgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataag 907  Q
    || || | |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||| ||   |||||     
12111594 attcatcacaattgcatatggaacgaacatacatatata--atattattttccaccatattccgaaatataaatccgacgtcgctatcatctttaataaa 12111691  T
908 ccaagccatatagcttgccgttttccat 935  Q
    ||||| ||||||||||| ||||||||||    
12111692 ccaaggcatatagcttgtcgttttccat 12111719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 182; E-Value: 7e-98
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 42503851 - 42503403
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||| ||||||||||  |||||||||||||||  |||||||||||| |  | |||||| |||| |||||| || | ||||||||||||||||| |    
42503851 agttaactgtcgaggaaaactgattatgcagacagtgagttctgcataattctaga-catttccaagctattttttcggccagtttttacctgtaattaa 42503753  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||| ||||||||| | |||| | || ||| ||| |||||| ||||||| ||||  |||||||||||| |||| |||||| ||| ||||||| |    
42503752 accagagcatctccaaaggctaaataattcatgcaagattgaaactcggtcataatcaagataaatacaatatcttttataattgttcatgattaaatta 42503653  T
689 aaccgacattt-ggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    |||| |||||| |||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||||    
42503652 aaccaacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcat 42503563  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
42503562 taaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 42503463  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||  ||||||| ||||||| ||| ||| ||||||||||||||||| |||||||||||||    
42503462 tcgccgtcgtcgcgaataagcaaaggcatgtagcttgccgttttcca-tgcgtattcatct 42503403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 43619740 - 43620188
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |    
43619740 agttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaa 43619838  T
589 accagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
    ||||||||||| ||||||| ||||||| | |||   |  ||| |||||||| |||||  |||  |||||||||||| |||||||||||  ||||||||||    
43619839 accagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcagacataatgaagataaatacaatatcttttacaattgttaataattaaat 43619937  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
43619938 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 43620027  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
43620028 ttaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgac 43620127  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
43620128 gtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 43620188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 30791022 - 30790571
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | | |||||||||||||||    
30791022 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccattttttacctgtaatt 30790924  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||||||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  ||||| |||||| ||||||||||| |||||||||    
30790923 aaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatagaatatcttttacaattgttcataattaa 30790824  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
30790823 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 30790734  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
30790733 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccg 30790634  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| |||||||||||| |||||||| |||||||||||||    
30790633 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttcca-tgcgtattcatct 30790571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 45767875 - 45767425
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
45767875 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 45767777  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||    
45767776 aaaccagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaa 45767678  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
45767677 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 45767588  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
45767587 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccg 45767488  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
45767487 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 45767425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 776 - 948
Target Start/End: Original strand, 29592839 - 29593010
Alignment:
776 attacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaac 875  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
29592839 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatgtattatcttccaccatattccgaaac 29592938  T
876 ataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||| |||||||||||||| || ||||||||||| |||||| |||||||||||||| |||||||||||||    
29592939 ataaatctgacgtcgctatcgttgcgaataagccaaggcatataacttgccgttttcca-tgcgtattcatct 29593010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 664 - 948
Target Start/End: Complemental strand, 47065146 - 47064859
Alignment:
664 tttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa---c 760  Q
    ||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| |||  |||||| ||| |||||   ||||   |    
47065146 tttacaattgtccataattaaatcaaaccgacatttgatttaaattacacaaaagtttgaaattcatcaaaatgttacaaagtatccataattaaatgtc 47065047  T
761 aacacatta--caactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatctt 858  Q
     | | ||||  ||||||||||||||| |||| ||||||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||||| ||    
47065046 cata-attaaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattatttt 47064948  T
859 ccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||| ||||||||||||  |||||||||||| ||   ||||| ||||| ||||||||||||||||||||| |||||||||||||    
47064947 ccaccatatttcgaaacataaatttgacgtcgctatcatctttaataaaccaaggcatatagcttgccgttttcca-tgcgtattcatct 47064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 491 - 730
Target Start/End: Complemental strand, 40928965 - 40928725
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||  |||||||||||| | || |||||| ||||||||||| || | ||||||||||||||||| |    
40928965 agttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaa 40928867  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| ||||||||||| |    
40928866 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatta 40928767  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||||||| ||| || ||||| |||||||||||||    
40928766 aaccgacatttggttaaaattaaacaaacgtttgaaattcat 40928725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 491 - 732
Target Start/End: Complemental strand, 34742407 - 34742166
Alignment:
491 agttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    ||||||||| |||||||||||| ||||||||||||||   ||||||| ||| | || |||||| |||||||||||||   ||||||||||||||||| ||    
34742407 agttaactgtcgaggaaaacaaattatgcagacagtgaactctgcatgattctaaaacatttccaagccatttttcggtcagtttttacctgtaattaaa 34742308  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
      |||||||||| |||||||| | || | |||||||||| |||||| | ||||| |||| ||||||||||||| ||||||||||||||||||||||||||    
34742307 gtagagcatttcgaaaggcaaaa-aattcatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaa 34742209  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcatta 732  Q
    | ||||||||| |||||| |||||||| |||||||||||||||    
34742208 atcgacatttgattcaaattacacaaacgtttgaaattcatta 34742166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 489 - 727
Target Start/End: Original strand, 29592602 - 29592841
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||| ||| ||||||  |||||||||||||||| |||||||||||| |||| |||||| || |||||||| || | |||||||||||||||||    
29592602 gtagttaactgtcgaagaaaactgattatgcagacagtggattctgcataatt-ttaaacatttccaaaccattttttcggccagtttttacctgtaatt 29592700  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     |||||||||||||||||||| || |||| | |||||| ||| |||||| | ||||| ||||  |||||||||||  |||||||||||||||||||||||    
29592701 aaaccagagcatttccaaaggaaaaataattcatacaagattgaaactcggacataaacaagataaatacaatattttttacaattgtccataattaaat 29592800  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaatt 727  Q
     |||||||||||||||||||| ||||||||  |||||||||    
29592801 taaaccgacatttggttcaaattacacaaacttttgaaatt 29592841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 491 - 730
Target Start/End: Original strand, 5537907 - 5538145
Alignment:
491 agttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||||||||||||||||||| ||||| ||||||||   ||||||| ||| | || |||||  |||||||||||||   |||||||||  |||||| ||    
5537907 agttaactgccgaggaaaacaaattatgtagacagtgagctctgcatgattctaaaacattttcaagccatttttcggtcagtttttac--gtaattaaa 5538004  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
     ||||||||||| ||||| || |||| | |||||||||| |||||| | ||||| |||| |||||| |||||| | ||||||||||||||||||||||||    
5538005 gcagagcatttcgaaagggaaaataattcatacaacattgaaactcggacataaacaagaaaaataaaatatcttatacaattgtccataattaaatcaa 5538104  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||||||||||| || ||||| |||||||||||||    
5538105 accgacatttggttcaaattatacaaacgtttgaaattcat 5538145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 530 - 730
Target Start/End: Complemental strand, 17838607 - 17838407
Alignment:
530 tctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacattt 629  Q
    ||||||| ||| | || |||||| ||||| ||||||| | ||| ||||| ||||||| |||||||||||||| |||||||| | || | ||||||||||     
17838607 tctgcatcattctaaaacatttccaagccttttttcggccagtatttacttgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattg 17838508  T
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattca 729  Q
    |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
17838507 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattca 17838408  T
730 t 730  Q
    |    
17838407 t 17838407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 491 - 730
Target Start/End: Complemental strand, 13323727 - 13323487
Alignment:
491 agttaactgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||||||| ||| ||||||| ||||||||| | ||   ||| ||||||| | || |||||| |||||||||||||   ||||||||||||||||| ||    
13323727 agttaactgctgagcaaaacaaattatgcagataatgagctcttcataattctaaaacatttccaagccatttttcgggcagtttttacctgtaattaaa 13323628  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
     ||||||||||| ||||| || |||| | ||||||| || ||||| || ||| | |||| ||||||||||||  ||||||||| ||||||||||||| ||    
13323627 gcagagcatttcgaaaggtaaaataattcatacaacgttgaaactgagacattaacaagaaaaatacaatattttttacaattttccataattaaattaa 13323528  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||| ||||| ||||||| |||||||| |||||||||||||    
13323527 accggcatttcgttcaaattacacaaacgtttgaaattcat 13323487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 651 - 730
Target Start/End: Complemental strand, 10522366 - 10522287
Alignment:
651 aaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||    
10522366 aaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcat 10522287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 485 - 586
Target Start/End: Complemental strand, 36186517 - 36186416
Alignment:
485 ggttgtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaa 584  Q
    ||||| |||||||||||||||||||||||||| || ||||||  |||||||||||| | ||||||||  |||||||||||||   |||||||||||||||    
36186517 ggttgcagttaactgccgaggaaaacaattatacatacagtgagttctgcataattctaaagcattttcaagccatttttcggtcagtttttacctgtaa 36186418  T
585 tt 586  Q
    ||    
36186417 tt 36186416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 496 - 615
Target Start/End: Original strand, 12111267 - 12111387
Alignment:
496 actgccgaggaaaacaattatgcagacag-tggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccaga 594  Q
    ||||||||  |||||||||||||||| || ||| || ||||||||| | ||||||||  |||  |||||||    ||||||||| ||||||| |||||||    
12111267 actgccgaacaaaacaattatgcagataggtgggttatgcataattctaaagcattttcaagttatttttcagtcagtttttacttgtaattaaaccaga 12111366  T
595 gcatttccaaaggcaatataa 615  Q
    |||||| ||||||||||||||    
12111367 gcattttcaaaggcaatataa 12111387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 19044231 - 19044300
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||||| | |||||||||    
19044231 aattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagtta 19044300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 20710405 - 20710336
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||||| | |||||||||    
20710405 aattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagtta 20710336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 21190724 - 21190655
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||||| |||||| || ||||||| ||||||||||||||||||  ||| |||||||||    
21190724 aattgttgttgacacattgcataagtctaagaaacacgagtaaaatacgtttttgccccctcggcagtta 21190655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 30355375 - 30355306
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||| |||||  ||| |||||||||    
30355375 aattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgccccctcggcagtta 30355306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 28980309 - 28980255
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||| |||||| |||||| ||| ||||||||||||||||||    
28980309 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttg 28980255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 45361586 - 45361655
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||  ||||||| ||||| || |||||||||||||||||| ||||||| |||| |||||||||    
45361586 aattgttgttcccacatttgataaggctaagaaacatgagtaaaatatgtttttgctccctcggcagtta 45361655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 471
Target Start/End: Complemental strand, 36186614 - 36186539
Alignment:
397 ttggaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||||||||||| ||||| |||| |  ||| |||||||||||| |||||  ||| |||||||||    
36186614 ttggaaaattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagtta 36186539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 10708401 - 10708360
Alignment:
408 ttgttgacacatttcataag-ctgagaaacatgagtaaaata 448  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
10708401 ttgttgacacatttcataagactgagaaacacgagtaaaata 10708360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 28112776 - 28112833
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| | ||||| |||  ||||||||||| |||||    
28112776 gaaaattgttgttgacacatttcataaggttgagacacacaagtaaaatacgcttttg 28112833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 40590627 - 40590558
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||  ||||||| ||||| |||||||||| || |||||||||||||||  ||| |||||||||    
40590627 aattgttgttcccacatttgataaggctgagaaacacgaataaaatacgtttttgccccctcggcagtta 40590558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 290; Significance: 1e-162; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 66935 - 67391
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||| ||||| |||   |||||||||||||||| |||||||||||||||||||||||| |||||||||||||   ||||||||||||||||| |||    
66935 agttaactaccgagaaaactgattatgcagacagtgggttctgcataattgttaagcatttccaagccatttttcggtcagtttttacctgtaattaaac 67034  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||||| | ||||| ||||||||| | |||||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||||||    
67035 cagagcaatcccaaatgcaatataattcatacaacatttaaactcacttataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaa 67134  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||   |||||||||||||||||||||||||||||||||||    
67135 ccgacatttggttcaaactacacaaaagtttgaaattcatcaaaacggtacatagtgtccataattaaacaacacattacaactcattacacatcattaa 67234  T
791 attaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcg 890  Q
    || |||||||||||||||| |||||||||  ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||    
67235 atgaaatccctacttacattcaacgcaatcacatatggaacgaacatacatatataatgtattattttccaccatattccgaaacataaatccgacgtcg 67334  T
891 ctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||| |||   ||||||||||| |||||||||||||||||| || |||||||||||||    
67335 ctattgtctttaataagccaagacatatagcttgccgtttttca-tgcgtattcatct 67391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 489 - 944
Target Start/End: Original strand, 6489388 - 6489847
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||| | ||||||||||  ||||| |    
6489388 gtagttaactgccgaggaaaacaattatgcagacagtgggttctgcataattctaaagcatttccaagccatttttcggccagtttttaccgctaattaa 6489487  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| |||||||| |||| |||||||||||||||||||||||||    
6489488 accagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacattatcttttacaattgtccataattaaatca 6489587  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttac-atagtgtccatgcataa---acaacacatt--acaactcattacac 782  Q
    ||||||||||||||||||| |||||||| |||||||||||||| || |||||| | ||||||||| | |||    | | | |||  ||||||||||||||    
6489588 aaccgacatttggttcaaattacacaaacgtttgaaattcattgaaacgttacaaaagtgtccatacttaagtgtccata-attaaacaactcattacac 6489686  T
783 atcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatc 882  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
6489687 atcattaaattaaattcctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaatataaatc 6489786  T
883 cgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||||| |||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||    
6489787 cgacgacgctatcgtcacgaataagccaaggcatatagcttgccgttttcca-tgcgtattc 6489847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 496 - 946
Target Start/End: Original strand, 21951866 - 21952305
Alignment:
496 actgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagag 595  Q
    |||||||||||||||||||||||||||||  | ||||||| |||| | || || ||| ||||||||||||| | |||||| || ||||||| ||||||||    
21951866 actgccgaggaaaacaattatgcagacagcaggttctgcagaattctaaaacaattccaagccatttttcggccagttttgacttgtaattaaaccagag 21951965  T
596 catttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgac 695  Q
    |||||||||| ||||||||| | |||||||||| ||||||   ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
21951966 catttccaaatgcaatataaatcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgac 21952065  T
696 atttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaa 795  Q
    ||||| || ||| |||||||| ||||||||||||| ||| |||||||  |||||||||  |||          |||||||||||||| ||||||||||||    
21952066 atttgattaaaattacacaaacgtttgaaattcatcaaaacgttacaatgtgtccatgattaa----------acaactcattacacgtcattaaattaa 21952155  T
796 atccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatc 895  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||||    
21952156 atccctagttacattcaatgcaattgcatatggaacgaacatacaaatataatatatcatcttccaccatattccgaaacctaaatccgacgtcgctatc 21952255  T
896 gtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcat 946  Q
     |||| ||||||||||| || |||||||||||||||||| |||||||||||    
21952256 atcgcgaataagccaaggcacatagcttgccgttttcca-tgcgtattcat 21952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 9426666 - 9427113
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||| ||||||||||| |  |||||||||| ||||| | |||||||||| | ||||||||| ||||||||||| || | ||||||||||||||||| |    
9426666 agttaaatgccgaggaaatctgattatgcagatagtgggt-ctgcataattataaagcatttccaagccattttttcggccagtttttacctgtaattaa 9426764  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |    
9426765 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 9426864  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||    
9426865 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcatt 9426954  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
9426955 aaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgt 9427054  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| ||||||| ||||||||||||| |||||||||||||    
9427055 cgccgtcgtcgcgaataagcaaaggcatatagtttgccgttttcca-tgcgtattcatct 9427113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 13743328 - 13743774
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||||||||| | || |||||| ||||||||||| || | ||||||||||||||||| |    
13743328 agttaactgccgaggaaaactgattatgtagacagtgggttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaa 13743426  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    || ||||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  || ||||||||| ||||||||||| ||||||||||| |    
13743427 actagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaatta 13743526  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||    
13743527 aaccgacatttggtt-aaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcatt 13743615  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
13743616 aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgt 13743715  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
13743716 cgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 4002517 - 4002056
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||    |||||||||||| | || |||||| ||||||||||| || | ||||||||||||||||| |    
4002517 agttaactgccgaggaaaactgattatgcagacagcaagttctgcataattctaaa-catttccaagccattttttcggcaagtttttacctgtaattaa 4002419  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  |||||||||||| ||||||||||||||||||||||| |    
4002418 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatta 4002319  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa---caacacattaca--actcattacaca 783  Q
    ||||||||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||| ||   |||    | | | |||| |  ||||||||||||    
4002318 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtctataactaagtgtccata-attaaataactcattacaca 4002220  T
784 tcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatcc 883  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
4002219 tcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattattttccaccattttccgaaacataaatcc 4002120  T
884 gacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||  ||||||| ||||||| ||| ||||||||||| ||||||||| |||||||||||||    
4002119 gacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgtcgttttcca-tgcgtattcatct 4002056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 48246471 - 48246919
Alignment:
489 gtagttaactgccgaggaaaacaatt-atgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgact-agtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  || |||||||||||| | | ||||||||| | || |||||  ||||||||||||   | |||||||||||||||||    
48246471 gtagttaactgccgaggaaaactgtttatgcagacagtg-tgtgtgcataattctaaa-cattttcaagccatttttccggtcagtttttacctgtaatt 48246568  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||| ||||||||| |||| | ||| |||||| |||||||| |||||||||   |||||||||||| |||||||||||||||||||||||    
48246569 aaaccagagcattttcaaaggcaaaataattcataaaacattgaaactcagacataagcaatataaatacaatatcttttacaattgtccataattaaat 48246668  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| ||||||||  |||||||||||| |||   ||||| |||||||||   |||||||          ||||||||||||||    
48246669 taaaccgacatttggttaaaattacacaaacttttgaaattcatcaaaaaattacaaagtgtccataattaaacaa----------ctcattacacatca 48246758  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
48246759 ttaaattaaatccctacttacattcaacgcagttgcatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatctgac 48246858  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||| ||||||||||  ||||||||||| ||||||||| |||||||||||||    
48246859 gtcgccgtcgtcgcgaataagccaaagcatatagcttgtcgttttcca-tgcgtattcatct 48246919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 6745340 - 6744891
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
6745340 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 6745242  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     |||||||||||||||||||| ||||||| | |||||| ||| |||||| | |||||  |||  |||||||||||| ||||||||||| |||||||||||    
6745241 aaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaat 6745142  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
6745141 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 6745052  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
6745051 ttaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgac 6744952  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    || ||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
6744951 gttgccgtcgtcgcgaataagcaaagacatatagcttgccgttttcca-tgcgtattcatct 6744891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 547 - 948
Target Start/End: Original strand, 46989629 - 46990034
Alignment:
547 catttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagc 645  Q
    |||||| ||||||||||| || | ||||||||||||||||| ||||| || |||| ||||||||| |||| | ||||||   | |||||| | ||||| |    
46989629 catttccaagccattttttcggccagtttttacctgtaattaaaccaaagtattttcaaaggcaaaataattcatacaaatgtgaaactcggacataaac 46989728  T
646 aagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatag 745  Q
    |||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||||||||||| ||| ||||||| ||    
46989729 aagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacatttgaaattcatcaaaacgttacaaag 46989828  T
746 tgtccatgcataaa---caacacatta--caactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacataca 840  Q
    |||||||   |||    | | | ||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||    
46989829 tgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctacttacattcaacacaattgcatgtggaacgaacataca 46989927  T
841 tatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgt 940  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||| |||||    
46989928 tatataatatattatcttccaccatattccaaaacataaatccgacgtcgtcatcgtcgcgaataagccaaggcatatagcttgccgttttcca-tgcgt 46990026  T
941 attcatct 948  Q
    ||||||||    
46990027 attcatct 46990034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 2857994 - 2857547
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||||||||||||| | |  |||||||||||||||  | |||||||||||| ||||||||| ||||||||||| || | ||||||||||||||||| |    
2857994 agttaactgccgaggatatctgattatgcagacagtgagt-ctgcataattgtaaagcatttccaagccattttttcggccagtttttacctgtaattaa 2857896  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||  | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |    
2857895 accagagcatttccaaaggcaaaataattcatacaagattgaaacttggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 2857796  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || ||||| |||||||||||||   | | ||||| |||||||||   ||||| ||          |||||||||||||||    
2857795 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcttaacattacaaagtgtccataattaaactac----------tcattacacatcatt 2857706  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||    
2857705 aaattaaatccctacttacattcaacgcaattacatatggaatgaacatacatatataatatattattttccaccattttccgaaacataaatccgacgt 2857606  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
2857605 cgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 2857547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 489 - 934
Target Start/End: Original strand, 36812896 - 36813346
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||| ||||||||||||||||  ||| |||||||||    |||||||||||| | || |||||| ||||||||||| || | |||||||||||||| ||    
36812896 gtagtaaactgccgaggaaaactgattgtgcagacagcaaattctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtagtt 36812994  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| ||||   |||||| ||| |||||| | ||||| ||||  |||||||||||| | ||||||||| |||||||||||    
36812995 aaaccagagcatttccaaaggcaaaataatccatacaagattgaaactcggacataaacaagataaatacaatatcttatacaattgttcataattaaat 36813094  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa---caacacatta--caactcattaca 781  Q
     |||||||||||||||| ||| || ||||| ||||||||||||||||| | ||||| ||| |||||   |||    | | | ||||  ||||||||||||    
36813095 taaaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattacaaagtttccataattaattgtccata-attaaacaactcattaca 36813193  T
782 catcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaat 881  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
36813194 catcattaaattatatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatattccaccatattccgaaacataaat 36813293  T
882 ccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttcca 934  Q
    ||||||||||  ||||||| ||||||| ||| |||||||||||||||||||||    
36813294 ccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttcca 36813346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 3953227 - 3952779
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    ||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||||| | ||||||||||||||||| ||    
3953227 agttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccatttttcggccagtttttacctgtaattaaa 3953129  T
590 ccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| ||||||||||| |||||||||||     
3953128 ccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaatt 3953029  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    |||||||||||||||| ||| || | | | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||||    
3953028 aaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcat 3952939  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
3952938 taaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacg 3952839  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | ||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
3952838 ttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 3952779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 30943248 - 30943699
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
30943248 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 30943346  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||||||||| | ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| ||||||||||| |||||||||    
30943347 aaaccagagcatttccaaaagtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaa 30943446  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
30943447 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 30943536  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
30943537 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccg 30943636  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
30943637 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 30943699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 8156569 - 8157017
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |    
8156569 agttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaa 8156667  T
589 accagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
    ||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||||    
8156668 accagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaat 8156766  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||    
8156767 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatca 8156856  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
8156857 ttaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgac 8156956  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
8156957 gtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 8157017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 772 - 948
Target Start/End: Original strand, 2743788 - 2743963
Alignment:
772 actcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccg 871  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
2743788 actcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatattatcttccaccatattccg 2743887  T
872 aaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
2743888 aaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 2743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 493 - 818
Target Start/End: Original strand, 7841158 - 7841474
Alignment:
493 ttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaac 590  Q
    ||||||||||||||||||  |||||||| ||||||| || ||||||||| | || |||||| ||||||||||| |||| ||||||||||||||||| |||    
7841158 ttaactgccgaggaaaactgattatgcaaacagtgggttatgcataattctaaa-catttccaagccattttttcgaccagtttttacctgtaattaaac 7841256  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    |||||||||||||||||||| |||| | |||||||||| |||||||| ||||| ||||  ||||||| |||| ||||||||||||||||| ||||| |||    
7841257 cagagcatttccaaaggcaaaataattcatacaacattgaaactcagacataaacaagataaatacagtatcttttacaattgtccataagtaaattaaa 7841356  T
691 ccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaa 790  Q
    ||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| |||||||||   |||          |||||||||| |||||||||||    
7841357 ccgacatttggttaaaattacacaaacgtttaaaattcatcaaaacgttacaaagtgtccataattaa----------acaactcattgcacatcattaa 7841446  T
791 attaaatccctacttacatgcaacgcaa 818  Q
    ||||||||||||||||||| ||||||||    
7841447 attaaatccctacttacattcaacgcaa 7841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 772 - 948
Target Start/End: Complemental strand, 50957419 - 50957244
Alignment:
772 actcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccg 871  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
50957419 actcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccg 50957320  T
872 aaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||| ||||||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
50957319 aaacaaaaatccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttcca-tgcgtattcatct 50957244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 769 - 948
Target Start/End: Complemental strand, 14402748 - 14402570
Alignment:
769 acaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatatt 868  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||    
14402748 acaactcattacacgtcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattattttccaccatatt 14402649  T
869 ccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
14402648 ccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 14402570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 489 - 730
Target Start/End: Complemental strand, 600558 - 600316
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    |||||||||||||||||||| |  || |||||| |||||   ||||||| ||| | || |||||| ||||||||||||| | | |||||||||||||||     
600558 gtagttaactgccgaggaaatctgatcatgcaggcagtgagctctgcatgattctaaaacatttccaagccatttttcggccaatttttacctgtaatta 600459  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||  |||||||| |||| | |||||||||| |||||| | ||||| |||| ||||||||||||| ||||||||||||||||||||||||    
600458 aaccagagcatttttaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaattgtccataattaaatc 600359  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
600358 aaaccgacatttggttcaaattacacaaacgtttgaaattcat 600316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 498 - 730
Target Start/End: Original strand, 50213525 - 50213758
Alignment:
498 tgccgaggaaaacaa-ttatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagc 596  Q
    ||||||||||||||| ||||| ||||||||   ||||||| ||| | || |||||| |||| |||||||| | ||||||||||||||||| || ||||||    
50213525 tgccgaggaaaacaaattatggagacagtgagctctgcatgattctaaaacatttctaagctatttttcggccagtttttacctgtaattaaagcagagc 50213624  T
597 atttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgaca 696  Q
    ||||| |||||||| |||| | |||||||||| |||||| | ||||| |||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
50213625 atttcgaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaaaatgcaatatcttttacaattgtccataattaaatcaaaccgaca 50213724  T
697 tttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||||||||| |||||||| |||||||||||||    
50213725 tttggttcaaattacacaaacgtttgaaattcat 50213758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 489 - 730
Target Start/End: Original strand, 47070527 - 47070769
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    |||||||||||||||| ||| |  ||||||||| |||||   ||| ||| ||| | || |||||| ||||||||||||| |||||||||||||||||||     
47070527 gtagttaactgccgagaaaatctgattatgcagtcagtgagctctacatgattctaaaacatttccaagccatttttcggctagtttttacctgtaatta 47070626  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||| |||||||| | || | |||||||||| ||||||   ||||| ||||  |||||||||||| ||| ||||||||||||||||||||    
47070627 aaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaagataaatacaatatcttttccaattgtccataattaaatc 47070726  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||| ||||||||||| |||||||| |||||||||||||    
47070727 aaaccgacgtttggttcaaattacacaaacgtttgaaattcat 47070769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 530 - 730
Target Start/End: Complemental strand, 36134255 - 36134055
Alignment:
530 tctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacattt 629  Q
    ||||||| ||| | || |||||| ||||  ||||||| | ||||||||||||||||| || ||||||||||| |||||||| |||| | ||||||||||     
36134255 tctgcatcattctaaaacatttccaagctttttttcggccagtttttacctgtaattaaatcagagcatttcgaaaggcaaaataattcatacaacattg 36134156  T
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattca 729  Q
    |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
36134155 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattca 36134056  T
730 t 730  Q
    |    
36134055 t 36134055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 491 - 735
Target Start/End: Complemental strand, 50957704 - 50957460
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| | |||||||||| |||| |||||| ||||||||||| || | ||||||||||||||||| |    
50957704 agttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataatt-ttaaacatttccaagccattttttcggccagtttttacctgtaattaa 50957607  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    | |||||||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |    
50957606 atcagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 50957507  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaat 735  Q
    ||| ||||||||||| ||| || ||||| ||||||||||||| ||||    
50957506 aacagacatttggttaaaattaaacaaacgtttgaaattcatcaaat 50957460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 530 - 727
Target Start/End: Complemental strand, 42166384 - 42166187
Alignment:
530 tctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacattt 629  Q
    ||||||| ||| | || |||||| ||||| ||||||| | ||||||||||||||||| |||||||||||||  |||||||| | || | ||||||||||     
42166384 tctgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaattaaaccagagcattttgaaaggcaaaacaattcatacaacattg 42166285  T
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaatt 727  Q
    |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||    
42166284 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacactaatgtttgaaatt 42166187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 491 - 730
Target Start/End: Complemental strand, 16647185 - 16646946
Alignment:
491 agttaactgccgaggaaaac-aattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||||||||||||||| | |||||||||| |||||   ||||||| ||| | || |||||| |||||||||| || | | |||||| |||||||| ||    
16647185 agttaactgccgaggaaatctaattatgcaggcagtgagctctgcatgattctaaaacatttccaagccattttccggccaatttttatctgtaattaaa 16647086  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
    |||||||||||| |||||||| | || | |||||||||| |||||||| |||||  |||  ||||| |||||| ||||| ||||||||||||||||||||    
16647085 ccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaa-aagataaatataatatcttttacgattgtccataattaaatcaa 16646987  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
16646986 accgacatttggtttaaattacacaaacgtttgaaattcat 16646946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 554 - 730
Target Start/End: Original strand, 2271479 - 2271656
Alignment:
554 aagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaag-taaa 652  Q
    ||||| ||||||| | ||||||||||||||||| |||||||||||||| |||||||| | || | |||||||||| |||||  | ||||| |||| ||||    
2271479 aagccttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaacttggacataaacaagataaa 2271578  T
653 atacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||||||    
2271579 atacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattagacaaacgtttaaaattcat 2271656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 530 - 731
Target Start/End: Complemental strand, 9473921 - 9473720
Alignment:
530 tctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacattt 629  Q
    ||||||| ||| | || |||||| ||||| ||||||| | ||||||||||||||||| ||||||| |||||| |||||||| | || | ||||||||||     
9473921 tctgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaattaaaccagatcatttcgaaaggcaaaacaattcatacaacattg 9473822  T
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattca 729  Q
    |||||| | ||||| |||   ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
9473821 aaactcggacataaacaatataaatacaatatctattacaattatccataattaaatcaaaccgacatttggttcaagttacacaaacgtttgaaattca 9473722  T
730 tt 731  Q
    ||    
9473721 tt 9473720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 530 - 727
Target Start/End: Original strand, 52387900 - 52388097
Alignment:
530 tctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacattt 629  Q
    ||||||| ||| | || |||||| ||||| ||||||| | ||||||||||||||||| |||||||||||||| ||||||||   || | ||||||||||     
52387900 tctgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaccaattcatacaacattg 52387999  T
630 aaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaatt 727  Q
    |||||| | ||||| |||   |||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
52388000 aaactcggacataaacaatataaatacaatatcttttacaattgaccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaatt 52388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 489 - 691
Target Start/End: Complemental strand, 14403010 - 14402808
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  |||||||| ||||||  |||||||||||| | || |||||| || |||||||| || | |||||||||||||||||    
14403010 gtagttaactgccgaggaaaactgattatgca-acagtgagttctgcataattctaaa-catttccaaaccattttttcggccagtttttacctgtaatt 14402913  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||    
14402912 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaat 14402813  T
687 caaac 691  Q
     ||||    
14402812 taaac 14402808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 491 - 635
Target Start/End: Original strand, 2743459 - 2743603
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| | |||||||| ||| || |||||| ||||||||||| || | ||||||||| ||||||| |    
2743459 agttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataaatgtaaa-catttcgaagccattttttcggccagtttttacttgtaattaa 2743556  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactc 635  Q
    |||||||||||||||||||||| |||| | |||||| ||| ||||||    
2743557 accagagcatttccaaaggcaaaataattcatacaagattgaaactc 2743603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 735
Target Start/End: Original strand, 2743678 - 2743747
Alignment:
666 tacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaat 735  Q
    ||||||||| ||||||||||| |||||||||||||||| ||| || ||||| ||||||||||||| ||||    
2743678 tacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaat 2743747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 635
Target Start/End: Original strand, 4004905 - 4005050
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||||||||||| |   | ||||| |||||   ||||||| ||| | || |||||| ||||  ||||||| | ||||||||| ||||||| |    
4004905 gtagttaactgccgaggaaatctgat-tgcaggcagtgagctctgcatcattctaaaacatttccaagcattttttcggccagtttttacatgtaattaa 4005003  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactc 635  Q
    ||||||||||||| |||||||| | || | |||||||||| ||||||    
4005004 accagagcatttcgaaaggcaaaacaattcatacaacattgaaactc 4005050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 43568860 - 43568917
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||    
43568860 gaaaattgttgttgacacattttataaggctgagaaacacgagtaaaatacgcttttg 43568917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 51402534 - 51402480
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||| ||||||||||||||||| | |||||||||| ||||||||||||||||||    
51402534 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttg 51402480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 42756097 - 42756150
Alignment:
404 attgttgttgacacatttcataagctg-agaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||||||||||||    
42756097 attgttgttgacacatttgataaggttcagaaacatgagtaaaatacgtttttg 42756150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 471
Target Start/End: Complemental strand, 45101988 - 45101915
Alignment:
399 ggaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||| |||||||||||||| | ||||  |||| |||||||||||||||| | ||| |||||||||    
45101988 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacgtttttatcccctcggcagtta 45101915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 66835 - 66907
Alignment:
400 gaaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||| |||||||||||||||| ||||| |||||| ||| |||||||||||| |||||  ||| |||||||||    
66835 gaaaactgttgttgacacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcagtta 66907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 527
Target Start/End: Complemental strand, 7839515 - 7839476
Alignment:
489 gtagttaactgccgaggaaaac-aattatgcagacagtgg 527  Q
    |||||||||||||||||||||| |||||||||||||||||    
7839515 gtagttaactgccgaggaaaactaattatgcagacagtgg 7839476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 34722221 - 34722276
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgt 457  Q
    |||||||||| |||||||| ||||| |||||||||| |||||||||||| ||||||    
34722221 aattgttgtttacacatttgataaggctgagaaacacgagtaaaatacgattttgt 34722276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 11380378 - 11380432
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||||  | || |||||||||| ||||||||||||||||||    
11380378 aattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttg 11380432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 41577012 - 41577066
Alignment:
403 aattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||||||||| ||||||||| |  | |||||||||||||||    
41577012 aattgttgttgacacatttcataaggctgagaaatacaaataaaatacgtttttg 41577066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 468
Target Start/End: Original strand, 44227066 - 44227132
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcag 468  Q
    |||||||||| |||||||| ||||| ||||| |||| |||||||||||| |||||  ||||||||||    
44227066 aattgttgttcacacatttgataagactgaggaacacgagtaaaatacgattttgcccccacggcag 44227132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 2433079 - 2433010
Alignment:
403 aattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||||| ||||| ||||||  ||| |||||||||||| |||| | ||| |||||||||    
2433079 aattgttgttgacacattgcataaggctgaggcacacgagtaaaatacgcttttatcccctcggcagtta 2433010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 29918480 - 29918423
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||| ||||||||| ||||||  |||| ||||||||||| |||||    
29918480 gaaaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttg 29918423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 29967633 - 29967576
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||| ||||||||| ||||||  |||| ||||||||||| |||||    
29967633 gaaaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttg 29967576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 260; Significance: 1e-144; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 493 - 944
Target Start/End: Complemental strand, 43377302 - 43376848
Alignment:
493 ttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaacca 592  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||| ||||||||||||| | ||||||||||||||||| |||||    
43377302 ttaactgccgaggaaaacaattatgcagacagtgggttctacataattctaaagcatttccaagccatttttcggccagtttttacctgtaattaaacca 43377203  T
593 gagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaacc 692  Q
    ||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||| |||||    
43377202 gagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatgaaacc 43377103  T
693 gacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacacatcat 787  Q
    || |||||||||||  |||||||| ||||||||||||| ||| ||||||| ||||||| |   |||    | | | |||  |||||||||||||||||||    
43377102 gaaatttggttcaagttacacaaacgtttgaaattcatcaaaacgttacaaagtgtccttaattaagtgtccata-attaaacaactcattacacatcat 43377004  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
43377003 taaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacg 43376904  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    || |||||||||| ||||| ||||  ||||||||||||||||||||| |||||||||    
43376903 tcactatcgtcgcgaataaaccaatgcatatagcttgccgttttcca-tgcgtattc 43376848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 501 - 911
Target Start/End: Complemental strand, 4867804 - 4867394
Alignment:
501 cgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcattt 600  Q
    |||||||||||| |||||||||||||| || ||||||||| | ||||||||| ||||||||||| | | ||||||||| ||||||| ||| |||||||||    
4867804 cgaggaaaacaactatgcagacagtgggttttgcataattctaaagcatttccaagccattttttggccagtttttacttgtaattaaactagagcattt 4867705  T
601 ccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttg 700  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||| || || ||||||||||||||||||||||| |||||||    
4867704 ccaaaggcaatataactcatacaacatttaaactcagtcataaacaagaaaaatacaatatctttcaccattgtccataattaaatcaaaccaacatttg 4867605  T
701 gttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccc 800  Q
     || |||||||||||||||||||||||||| ||| | ||||||||| |||||   ||||||||| |||||||||||||||  ||||||||||||||||||    
4867604 atttaaaatacacaaaagtttgaaattcatcaaaacattacatagtctccataattaaacaacagattacaactcattacttatcattaaattaaatccc 4867505  T
801 tacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgc 900  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||| || |    
4867504 tacttacattcaacgcaattggatatggaacgaacatacgtatataatatattattttccaccataatccgaaacataaatccgacgtcgttatcatctc 4867405  T
901 aaataagccaa 911  Q
     ||||||||||    
4867404 gaataagccaa 4867394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 500 - 944
Target Start/End: Original strand, 2124248 - 2124698
Alignment:
500 ccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt---aaccagagc 596  Q
    |||||||||||||||||||||||||||| |||||||||||| | | ||||||| ||||||||||||| | | |||||||||| ||| |   |||||||||    
2124248 ccgaggaaaacaattatgcagacagtgggttctgcataattctaatgcatttccaagccatttttcggccactttttacctggaatatttaaaccagagc 2124347  T
597 atttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgaca 696  Q
    ||||||||||||||||||| | |||||||||| |||||| ||||||| |||| |||||| |||||| |||||| ||||||||| ||||||||||||||||    
2124348 atttccaaaggcaatataaatcatacaacattgaaactcggtcataaccaagaaaaatataatatcttttacagttgtccatagttaaatcaaaccgaca 2124447  T
697 tttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa---acaacacatt--acaactcattacacatcattaaa 791  Q
    ||||||||||| ||||||||  |||||||||||| ||| ||||||| |||||||||   |||    | | | |||  |||||||||||||||||||||||    
2124448 tttggttcaaattacacaaacatttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaa 2124546  T
792 ttaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgc 891  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||    
2124547 ttaagtccctacttacattcaacgcaattgcatatggaacgaaaatacatatataatatattatcttccaccatattccgaaacataaatccaaagtcgc 2124646  T
892 tatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||| ||||| ||||||| ||| ||||||||||||||||||||| |||||||||    
2124647 tattgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattc 2124698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 647 - 948
Target Start/End: Complemental strand, 7172182 - 7171882
Alignment:
647 agtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagt 746  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| |||||||||||    
7172182 agtaaaatacaatatcttttacaattgtccataattaaatcaaacccacattttgttcaaaatacacaaaagtttgaaattcatgaaaacgttacatagt 7172083  T
747 gtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatata 846  Q
    ||||||   ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
7172082 gtccataattaaacaacacattacaactcagtacacatcattaaattaaatctctacttacattcaatgcaattgcatatggaacgaacatacatatata 7171983  T
847 acatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcat 946  Q
    | ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||    
7171982 atatattattttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccattttcca-tgcgtattcat 7171884  T
947 ct 948  Q
    ||    
7171883 ct 7171882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 39518 - 39965
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||  |||||||||||| | || |||||| ||||||||||| || | | ||||||||||||||| |    
39518 agttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaa-catttccaagccattttttcggccaatttttacctgtaattaa 39616  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| | |||||| ||| || ||||| ||||| ||||  |||||||||||| ||||||||||||||||||||||| |    
39617 accagagcatttccaaaggcaaaataattcatacaagattgaacctcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 39716  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||| ||| || |||||  |||||||||||| ||| | ||||| |||||||||   |||||||          ||||||||||||||||    
39717 aaccgacatttggttaaaattaaacaaacatttgaaattcatcaaaacattacaaagtgtccataattaaacaa----------ctcattacacatcatt 39806  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |    
39807 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatccgacat 39906  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||  |||| || ||||||| ||| ||||||||||| ||||||||| |||||||||||||    
39907 cgccgtcgttgcgaataagcaaagacatatagcttgtcgttttcca-tgcgtattcatct 39965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 491 - 948
Target Start/End: Original strand, 35962368 - 35962815
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  ||||||||| |||||| |||||||||||| | || |||||  ||||||||||| || | | ||||||| |||||||      
35962368 agttaactgccgaggaaaactgattatgcaggcagtgggttctgcataattctaaa-cattttcaagccattttttcggccaatttttacgtgtaattat 35962466  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||| ||| | |||||||| |||| | |||||||||| |||||| |  |||| ||||  |||||||||||| ||||||||||||||||||||||| |    
35962467 accagagtattacaaaaggcaaaataattcatacaacattaaaactcggatataaacaagataaatacaatatcttttacaattgtccataattaaatta 35962566  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    |||||| |||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||    ||||||  ||      |||||||||| |||||||||    
35962567 aaccgaaatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgt----gcataattaa------acaactcattgcacatcatt 35962656  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
35962657 aaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatattatcttccaccatattccgaaacataaatccgacgt 35962756  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||    
35962757 cgctatcgtcgcgaataagccaaggcatatagcttgtcgttttcca-tgcgtattcatct 35962815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 43679456 - 43679904
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    ||||||||||||||| ||||| |||||| |||||||||| || ||||||||| | ||||||||| ||  ||||||| | ||| ||||||| ||||||| |    
43679456 gtagttaactgccgaagaaaataattatacagacagtgggttttgcataattctaaagcatttccaaatcattttttggctaatttttacatgtaattaa 43679555  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||| |  ||||||||||||||||||| | |||||| ||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
43679556 accaaaatatttccaaaggcaatataaatcatacaaaattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatca 43679655  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatt 788  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||| ||||| |||   |||          ||||||||||||||||||||    
43679656 aaccgacatttggttcaaattacacaaaagtttaaaattcatcaaaacgttacaaagtgttcataattaa----------acaactcattacacatcatt 43679745  T
789 aaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgt 888  Q
    | ||||||||||| ||||||| || | |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
43679746 atattaaatccctgcttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatctgacgt 43679845  T
889 cgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | ||||||||   |||||| |||| |||||| |||| ||||||||| ||||| |||||||    
43679846 ctctatcgtctttaataagtcaaggcatataacttgtcgttttcca-tgcgtgttcatct 43679904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 496 - 948
Target Start/End: Original strand, 23924032 - 23924473
Alignment:
496 actgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccaga 594  Q
    |||||||||||||||  |||||||||||| ||| || ||||||||| | || |||||  |||||||||||||   ||||||||||||||||| ||| |||    
23924032 actgccgaggaaaactgattatgcagacaatggattatgcataattctaaa-cattttcaagccatttttcggtcagtttttacctgtaattaaactaga 23924130  T
595 gcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccga 694  Q
    |||||||||||||||| |||| | |||||| ||| |||||| | |||||  |||  || ||||||||| ||||||||||| ||||||||||| |||||||    
23924131 gcatttccaaaggcaaaataattcatacaagattgaaactcggacataaaaaagataagtacaatatcttttacaattgttcataattaaattaaaccga 23924230  T
695 catttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaatta 794  Q
    ||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||||||          ||||||||||||||||||||||    
23924231 catttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaa----------ctcattacacatcattaaatta 23924320  T
795 aatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctat 894  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||  |    
23924321 aatccctacttacattcaacgcaactgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatccgacgtcgccgt 23924420  T
895 cgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
23924421 cgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 23924473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 31960075 - 31959612
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||| ||||| ||||||||||  |||||||||||||    |||||||||||| | || |||||  ||||||||||| || | |||||||||||||||||    
31960075 gtagtaaactgtcgaggaaaactgattatgcagacagcaagttctgcataattctaaa-catttgcaagccattttttcggccagtttttacctgtaatt 31959977  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | ||| || ||| |||||| | ||||| ||||  |||||||||||| ||||||||||| ||| |||||||    
31959976 aaaccagagcatttccaaaggcaaaataattcatataagattgaaactcggacataaacaagataaatacaatatcttttacaattgttcatgattaaat 31959877  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa---caacacatta--caactcattaca 781  Q
     ||||| |||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||    | | | ||||  ||||||||||||    
31959876 taaacccacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaattgtccata-attaaacaactcattaca 31959778  T
782 catcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaat 881  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
31959777 catcattaaattaaatccatacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccaaaacataaat 31959678  T
882 ccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
31959677 ccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 31959612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 27237773 - 27237570
Alignment:
8 ttctttgcacccaaatggtataatatgcttttggacattctttaatttgcacaaaattattggttatatttgtctacatacattatgtgatgtgatattt 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
27237773 ttctttgcacccaaatggtataatatgcttttagacattctttaatttgcacaaaattattggttatatttgtctatatacattatgtgatatgatattt 27237674  T
108 gtgaaggtcacaagttgcaatttgaaacgttgcagcttcttatttatccaaaactataattctatttgatcacgaggacaaaataactcgtcccatgaac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
27237673 gtgaaggtcacaagttgcaatttgaaacgttgcagcttcttatttatccaaaactataattctatttgatcacgacgacaaaataacttgtcccatgaac 27237574  T
208 ttat 211  Q
    ||||    
27237573 ttat 27237570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 7344569 - 7344121
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    ||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||||| | ||||||||||||||||| ||    
7344569 agttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccatttttcggccagtttttacctgtaattaaa 7344471  T
590 ccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| ||||||||||| |||||||||||     
7344470 ccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaatt 7344371  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    |||||||||||||||| ||| || | | | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||||    
7344370 aaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcat 7344281  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
7344280 taaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacg 7344181  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | ||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
7344180 ttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 7344121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 529 - 948
Target Start/End: Original strand, 30301233 - 30301643
Alignment:
529 ttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatac--aac 625  Q
    |||||||||||| | ||| ||||| ||||||||||| || | ||||||||||||||||| |||||||||||||||||||| ||||||| | |||   |      
30301233 ttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatg 30301331  T
626 atttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaa 725  Q
    ||| |||||| | |||||  |||  |||||||||||| ||||||||||| ||||||||||| |||||||||||||||| ||| || ||| | ||||||||    
30301332 attgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaa 30301431  T
726 ttcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcata 825  Q
    ||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
30301432 ttcatcaaaacattacaaagtgtccataattaaactac----------tcattacacatcattaaattaaatccctacttacattcaatgcaattacata 30301521  T
826 tggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgc 925  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||| ||||||||||||    
30301522 tggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgc 30301621  T
926 cgttttccattgcgtattcatct 948  Q
    ||||||||| |||||||||||||    
30301622 cgttttcca-tgcgtattcatct 30301643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 638 - 948
Target Start/End: Complemental strand, 22588306 - 22588007
Alignment:
638 tcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcg 737  Q
    |||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||| || ||| ||    
22588306 tcataaacaagaaaaatacaatatcttttacaattatccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattgatcaaaacg 22588207  T
738 ttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacat 837  Q
    ||||| |||||||||   ||||||||          |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
22588206 ttacaaagtgtccataattaaacaac----------tcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacat 22588117  T
838 acatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattg 937  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||   ||| ||||||| ||||||||||||||||||||| ||    
22588116 acatatataatatattatcttccaccatatttcaaaacataaatccgacgtcgctatcgtcttcaattagccaagacatatagcttgccgttttcca-tg 22588018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 503 - 852
Target Start/End: Original strand, 39751134 - 39751473
Alignment:
503 aggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttcc 602  Q
    ||||||||| ||||||||||||||| ||||||||| || | | ||||||| |||| |||||| | | |||||||| || ||||| |||||||||||||||    
39751134 aggaaaacagttatgcagacagtggattctgcatatttataatgcatttccaagctattttttggccagtttttaactataattaaaccagagcatttcc 39751233  T
603 aaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggt 702  Q
    |||| |||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||| ||||||||||    
39751234 aaagacaatataaatcatacaacattgaaactcggtcataaccaagaaaaatacaatatcttttacagttgtccgtaattaaatcaaactgacatttggt 39751333  T
703 tcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatcccta 802  Q
    ||||| |||||||| ||||||||||||| ||| ||||||| |||||||||   |||          ||||||||||||||||||||||||||||||||||    
39751334 tcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa----------acaactcattacacatcattaaattaaatcccta 39751423  T
803 cttacatgcaacgcaattgcatatggaacgaacatacatatataacatat 852  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| ||||    
39751424 cttacattcaacgtaattgcatatggaacgaacatacatatataatatat 39751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 32375710 - 32376160
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||||  | |||||||||||| | ||| ||||| ||||||||||| || | |||||||||||||||||    
32375710 gtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattct-aagtatttccaagccattttttcggccagtttttacctgtaatt 32375808  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||| ||||||| ||||||| | |||   |  ||| ||||||   |||||  |||  |||||||||||| |||||||||||  ||||||||    
32375809 aaaccagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcgaacataatgaagataaatacaatatcttttacaattgttaataattaa 32375907  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || ||| |||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
32375908 attaaatcgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 32375997  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
32375998 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccg 32376097  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||| |||||||| ||||||| ||| ||||||||||||||||| ||| |||||||||||||    
32376098 acgtcgccatcgtcgcgaataagcaaaggcatatagcttgccgtttccca-tgcgtattcatct 32376160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 8419463 - 8419913
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||    |||||||||||| |   |||||||||||| | ||| ||||| ||||||||||| || | |||||||| ||||||||    
8419463 gtagttaactgccgaggaaatttgattatgcagacaataagttctgcataattct-aagtatttccaagccattttttcggccagtttttatctgtaatt 8419561  T
587 taaccagagcatttccaaaggcaatataacttatac--aacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaa 684  Q
     |||||||||||| ||||||| ||||||| | |||   |  ||| |||||| | |||||  |||  |||||||||||| |||||||||||  ||||||||    
8419562 aaaccagagcatt-ccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaa 8419660  T
685 atcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacat 784  Q
    || |||||||||||||||| ||| || ||| | ||||||||||||| ||| | ||||| |||||||||   ||||| ||          |||||||||||    
8419661 attaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactac----------tcattacacat 8419750  T
785 cattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccg 884  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
8419751 cattaaattaaatccctacttacattcaatgcaattacatatggaacgaacgtacatatataatatattgtcttccaccatattccgaaacataaatccg 8419850  T
885 acgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
8419851 acgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 8419913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 570 - 948
Target Start/End: Complemental strand, 22661506 - 22661139
Alignment:
570 agtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttaca 669  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||| | || ||||||||||| |||||||||||| |||| |||||||| |||| |||||     
22661506 agtttttacctgtaattcaactagagcatttccaaaggcattattagttgtacaacatttatactcagtcataaacaagaaaaatacattatcttttacg 22661407  T
670 attgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacatta 769  Q
     |||||||||||||||||||||||| |||| ||| ||| ||||| || |||||| |||||| ||| | ||| | |||||||||   ||||||||||||||    
22661406 gttgtccataattaaatcaaaccgatatttcgttaaaattacacgaatgtttgagattcatcaaaacattaaagagtgtccataattaaacaacacatta 22661307  T
770 caactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattc 869  Q
    ||           ||| |||||||||||| ||||| |||| |  |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
22661306 cat----------atcgttaaattaaatctctactgacattctgcgcagttgcatatggaacgaacatacatatataatatatcatcttccaccatattc 22661217  T
870 cgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||| | ||||||||||||||||||  ||||||||||| ||||| ||||||||||||||| ||| |||||||||    
22661216 cgaaacatagacccgacgtcgctatcgtcgtgaataagccaaggcatatggcttgccgttttcca-tgcatattcatct 22661139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 491 - 700
Target Start/End: Original strand, 23578496 - 23578705
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||||| | ||||||||| || |||||||||  | ||||||||||||||||| |||    
23578496 agttaactaccgaggaaaaaaattatgcagacagtgggttctgcataattctaaagcatttccaaaccatttttcagccagtttttacctgtaattaaac 23578595  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaa 690  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
23578596 cagagcatttccaaaggcaatataaattatacaacattgaaactctgtcataaacaagaaaaatacaatatcttttacaattgttcataattaaatcaaa 23578695  T
691 ccgacatttg 700  Q
    ||||||||||    
23578696 ccgacatttg 23578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 491 - 833
Target Start/End: Complemental strand, 20549270 - 20548938
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaa 589  Q
    |||||||| |||||||||||  |||||||||||||    |||||||||||| | || |||||| |||||||  |||| | ||||||||||||||||| ||    
20549270 agttaactaccgaggaaaactgattatgcagacagcaagttctgcataattctaaa-catttccaagccatcattcggccagtttttacctgtaattaaa 20549172  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 689  Q
    ||||||||||||||||| ||| |||| | |||||| ||| |||||| |  |||| ||||  |||||||||||| ||||||||||| ||||||||||| ||    
20549171 ccagagcatttccaaagacaaaataattcatacaagattgaaactcggatataaacaagataaatacaatatcttttacaattgttcataattaaattaa 20549072  T
690 accgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatta 789  Q
    ||||| |||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||          |||||||||||||||||||||    
20549071 accgaaatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa----------acaactcattacacatcatta 20548982  T
790 aattaaatccctacttacatgcaacgcaattgcatatggaacga 833  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
20548981 aattaaatccttacttacattcaacgcaattgcatatggaacga 20548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 491 - 727
Target Start/End: Original strand, 41743925 - 41744162
Alignment:
491 agttaactgccgaggaaaac-aattatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||| |||||| ||||||||||| || | ||||||||| ||||||| |    
41743925 agttaactgccgaagaaaactaattatgcagacagtgggttctgcataatt-ttaaacatttccaagccattttttcggccagtttttacatgtaattaa 41744023  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||||| |||| |||||||| ||| ||||||   ||||| ||||  |||||||||||  ||||||||||||||| ||||||| |    
41744024 accagagcatttccaaaggcaaaataatttatacaagattgaaactcgaacataaacaagataaatacaatattttttacaattgtccatgattaaatta 41744123  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaatt 727  Q
    ||||||||||||||||||| |||||||| ||||||||||    
41744124 aaccgacatttggttcaaattacacaaacgtttgaaatt 41744162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 776 - 948
Target Start/End: Original strand, 41744160 - 41744331
Alignment:
776 attacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaac 875  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||     
41744160 attacacatcattaaattaagtccctacttacattcaacgcaattgcatatggagcgaatatacatatataatatattatcttccaccatattccgaaat 41744259  T
876 ataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||||||||||||   ||||||||||| |||||| |||| ||||||||| |||||||||||||    
41744260 ataaatccgacgtcgctatcgtcatgaataagccaaggcatataacttgtcgttttcca-tgcgtattcatct 41744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 489 - 730
Target Start/End: Original strand, 34366970 - 34367212
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattt 587  Q
    ||||||||||||||| |||| |  ||||||||| |||||   ||||||| ||| | || |||||| ||||| ||||||| | |||||||||||||||||     
34366970 gtagttaactgccgatgaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaatta 34367069  T
588 aaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatc 687  Q
    |||||||||||||| |||||||| | || | ||||| |||| |||||| | ||||| ||||  |||||||||||| ||||||||||||||||||||||||    
34367070 aaccagagcatttcgaaaggcaaaacaattcatacagcattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatc 34367169  T
688 aaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    |||||||||||| ||||||| |||||||| |||||||||||||    
34367170 aaaccgacattttgttcaaattacacaaacgtttgaaattcat 34367212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 493 - 650
Target Start/End: Complemental strand, 7172623 - 7172463
Alignment:
493 ttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagttttt--acctgtaatttaa 589  Q
    |||||||||||| |||||  |||||||||||||||| |||||||||||| | ||||||||| ||||| |||||| ||  ||||||  || ||||||| ||    
7172623 ttaactgccgagaaaaactgattatgcagacagtggcttctgcataattctaaagcatttccaagccgtttttcaacctgtttttttacttgtaattaaa 7172524  T
590 ccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagta 650  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||    
7172523 ccagagcattttcaaaggcaatataacttatacaacatttaaacttagtcataaacaagta 7172463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 570 - 730
Target Start/End: Original strand, 41238989 - 41239149
Alignment:
570 agtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttaca 669  Q
    |||||| |||||||||| || ||||||||||| ||| |||| |||| | |||||||||| || ||| | ||||| ||||  |||||||||||| ||||||    
41238989 agttttaacctgtaattaaagcagagcatttcgaaatgcaaaataattcatacaacattgaatctcggacataaacaagacaaatacaatatcttttaca 41239088  T
670 attgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
41239089 attgttcataattaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcat 41239149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 844 - 944
Target Start/End: Original strand, 39751659 - 39751758
Alignment:
844 ataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtatt 943  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||    
39751659 ataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagtttgccgttttcca-tgcgtatt 39751757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 241 - 398
Target Start/End: Complemental strand, 27237573 - 27237408
Alignment:
241 ttatgatcaagtgattaagcatgtgcaatttaatgtcgccacaaagagtgctgttcctatat-----gtcccc--caccaaaattaaa--gtcttcgcac 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||   | |      | ||    |||||||||||||  ||||| ||||    
27237573 ttatgatcaagtgattaagcatgtgcaatttaatgtcgccacaaagagtgatgttgtcaaaacagaaggccagttcaccaaaattaaaaagtcttggcac 27237474  T
332 tttgtttgaagttgtgaacaagttctacaagtaacttcactattgtcttgattagaagtttatgttt 398  Q
    || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
27237473 tt-gtctgaagttgtgaacaagttctacaagtaacttcactattgtcttgattaaaagtttatgttt 27237408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 595 - 781
Target Start/End: Complemental strand, 30972781 - 30972595
Alignment:
595 gcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccga 694  Q
    |||||| || |||||||| |||| ||||| |||||| |||||||||||| |||| |||||||| |||| |||||  ||||| |||||||||||||  | |    
30972781 gcattttcagaggcaatacaactcatacatcatttatactcagtcataaacaagaaaaatacattatcttttacggttgtcgataattaaatcaattcaa 30972682  T
695 catttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattaca 781  Q
    ||||| ||| ||| ||||| || ||||||||||||| ||| | ||||| ||| | |||   ||||||||||||||||  ||||||||    
30972681 catttcgttaaaattacacgaatgtttgaaattcatcaaaacattacagagtatacataattaaacaacacattacacatcattaca 30972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 572 - 730
Target Start/End: Original strand, 31280953 - 31281113
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||||||||| |||||||||||||||| || ||||| |||| ||||| |||||| | || ||||||| |||| | ||||||  ||| ||||||||    
31280953 tttttacctgtaattcaaccagagcatttccagagacaatacaactcatacaccatttataatcggtcataaacaagaacaatacataatcttttacaat 31281052  T
672 tgtccataattaaatcaaaccgacatttggttcaaa--atacacaaaagtttgaaattcat 730  Q
    || |  |||||||||||| | ||||||| ||| |||   ||||| || |||||||||||||    
31281053 tgactgtaattaaatcaatctgacatttcgttaaaattttacacgaatgtttgaaattcat 31281113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 491 - 610
Target Start/End: Complemental strand, 1116226 - 1116107
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    |||||||||||||| |||||  ||||||||||||| || |||||||||||| | || || ||| ||||||||||| || | |||||| |||||||||| |    
1116226 agttaactgccgagaaaaactgattatgcagacagagggttctgcataattctaaa-caattccaagccattttttcggccagtttt-acctgtaattaa 1116129  T
589 accagagcatttccaaaggcaa 610  Q
    ||||||||||||||||||||||    
1116128 accagagcatttccaaaggcaa 1116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 572 - 696
Target Start/End: Complemental strand, 29807168 - 29807044
Alignment:
572 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaat 671  Q
    ||||||||||||||| ||||| |||||||||| |||||||| |||| |||||  ||||| | | |||||||| |||| | | ||||  ||| ||||||||    
29807168 tttttacctgtaattcaaccatagcatttccagaggcaatacaactcatacactatttataataagtcataaacaagaacattacatgatcttttacaat 29807069  T
672 tgtccataattaaatcaaaccgaca 696  Q
    ||| |||||||||||| | ||||||    
29807068 tgttcataattaaatctatccgaca 29807044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 820 - 911
Target Start/End: Original strand, 31281193 - 31281282
Alignment:
820 tgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaa 911  Q
    |||| |||||||||||||| | |||||| ||||||||||| ||||||||| ||||||||||||| ||||  |||||||| | ||||||||||    
31281193 tgcagatggaacgaacataaagatataatatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 31281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 41855306 - 41855359
Alignment:
404 attgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
41855306 attgttgttgacacatttcatatggctgagaaacatgagtaaaatacgtttttg 41855359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 41858257 - 41858188
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||  ||| |||||||||    
41858257 aattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagtta 41858188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 40077386 - 40077332
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||    
40077386 aattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttg 40077332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 5300684 - 5300753
Alignment:
403 aattgttgttgacacatttcataagct-gagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||| ||| || ||||||    
5300684 aattgttgttgacacatttgataaggttgagaaacacgagtaaaatacgtttttgtcccctcgacagtta 5300753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 18441577 - 18441508
Alignment:
403 aattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    |||||||||||||||||||||||| ||||||| |||  |||||||||||||||||  ||| |||||||||    
18441577 aattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagtta 18441508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 491 - 539
Target Start/End: Complemental strand, 29807241 - 29807193
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataat 539  Q
    |||||||||||||||||| ||||||| |||||||||| |||| ||||||    
29807241 agttaactgccgaggaaatcaattatacagacagtggcttctacataat 29807193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 459
Target Start/End: Original strand, 42602395 - 42602454
Alignment:
401 aaaattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttc 459  Q
    |||| |||||||||||| ||||||| | |||||||||| ||||||||||| |||||||||    
42602395 aaaaatgttgttgacacgtttcatatggctgagaaacacgagtaaaatacatttttgttc 42602454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 5304280 - 5304227
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgttttt 455  Q
    |||||||||| |||||||| ||||| |||| ||||| |||||||||||||||||    
5304280 aattgttgttcacacatttgataaggctgaaaaacacgagtaaaatacgttttt 5304227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 7168022 - 7168079
Alignment:
400 gaaaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttg 456  Q
    ||||||||||||||||||||||||||| ||||||  |||  ||||||||||| |||||    
7168022 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttg 7168079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 491 - 520
Target Start/End: Complemental strand, 39277473 - 39277444
Alignment:
491 agttaactgccgaggaaaacaattatgcag 520  Q
    ||||||||||||||||||||||||||||||    
39277473 agttaactgccgaggaaaacaattatgcag 39277444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 491 - 948
Target Start/End: Complemental strand, 5339 - 4891
Alignment:
491 agttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaattta 588  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||| |  | |||||| ||||||||||| || | ||||||||||||||||| |    
5339 agttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcggccagtttttacctgtaattaa 5241  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    |||||||||||||||||||| | |||| | |||||| ||| |||||| ||||||| ||||  |||||||||||| ||||||||||| ||||||||||| |    
5240 accagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatta 5141  T
689 aaccgacattt-ggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcat 787  Q
    ||||||||||| |||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||| ||          ||||||||||||||    
5140 aaccgacattttggttaaaattaaacaaacgtttgaaattcatgaaaacattacaaagtgtccataattaaactac----------tcattacacatcat 5051  T
788 taaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacg 887  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
5050 taaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 4951  T
888 tcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||  ||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||    
4950 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 215; Significance: 1e-117; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 489 - 948
Target Start/End: Complemental strand, 15969 - 15520
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattt-ttcgactagtttttacctgtaatt 586  Q
    |||||||||| |||||||||||  |||||||||||||||  |||||||||||| | || |||||| ||||||||| |||| | |||||||||||||||||    
15969 gtagttaacttccgaggaaaactgattatgcagacagtgagttctgcataattctaaa-catttctaagccatttgttcggccagtttttacctgtaatt 15871  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||    
15870 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaat 15771  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     |||||||||||| ||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   ||||||||          |||||||||||||    
15770 taaaccgacatttagttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaac----------tcattacacatca 15681  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgac 886  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||    
15680 ttaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatctgac 15581  T
887 gtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||| |  ||||||| ||||||| ||| ||||||||||||||||||||| | |||||||||||    
15580 gtccccgtcgtcgcgaataagcaaaggcatatagcttgccgttttcca-tacgtattcatct 15520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 195; Significance: 1e-105; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 489 - 948
Target Start/End: Original strand, 22462 - 22922
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||||||||||||  ||||||||  |||||  |||||||||||| | || |||||| ||||||||||| || | | |||||||||||||||    
22462 gtagttaactgccgaggaaaactgattatgca--cagtgagttctgcataattctaaa-catttccaagccattttttcggccaatttttacctgtaatt 22558  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||||||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  |||||||||||| |||||||||||||||||||||||    
22559 aaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagataaatacaatatcttttacaattgtccataattaaat 22658  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaa---caacacatta--caactcattaca 781  Q
     |||||||||||||||| ||| || ||||| ||| ||||||||| ||| | ||||| ||||| |||   |||    | | | ||||  ||||||||||||    
22659 taaaccgacatttggttaaaattaaacaaacgtt-gaaattcatcaaaacattacaaagtgttcataattaagtgtccata-attaaacaactcattaca 22756  T
782 catcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaat 881  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||    
22757 catcattaaattaaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatataatattttccaccatattctgaaacataaat 22856  T
882 ccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    ||||||||||  ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
22857 ccgacgtcgccgtcgtcgcaaataagcaaaggcatatagcttgccgttttcca-tgcgtattcatct 22922  T

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Target: scaffold0219 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 489 - 866
Target Start/End: Complemental strand, 20126 - 19743
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    |||||| |||||||||||||||  |||||||||||||||| |||||||||||| | ||||||||| ||||  ||||| ||   |||||||||||||||||    
20126 gtagtttactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaagcatttccaagcttttttttcggtcagtttttacctgtaatt 20027  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     |||||||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||    
20026 aaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaat 19927  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataa----acaacacattacaactcattacac 782  Q
    ||||||||||||||||||||| |||||||| |||| |||||||| ||| ||||||| |||| || |   |||     ||  |    |||||||||| |||    
19926 caaaccgacatttggttcaaattacacaaacgtttaaaattcatcaaaacgttacaaagtggccgtaattaagtgttcataattaaacaactcattgcac 19827  T
783 atcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccata 866  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
19826 atcattaaattaaatccctacttacattcaacgcaattgcatatggaacgagcatacatatataatatattatcttccaccata 19743  T

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Target: scaffold0219; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 864 - 944
Target Start/End: Complemental strand, 19582 - 19503
Alignment:
864 atattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattc 944  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||    
19582 atattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttcca-tgcgtattc 19503  T

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Target: scaffold0057 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 544 - 946
Target Start/End: Original strand, 21764 - 22144
Alignment:
544 aagcatttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataa 643  Q
    ||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||| | |||||| ||| ||||||            
21764 aagcatttctaagccatttttcggccagtttttacctgtaattaaaccagagcatttccaaaagcaatataaatcatacaatattgaaactc-------- 21855  T
644 gcaagtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacat 743  Q
        | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |     
21856 ----gaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttaaaa 21951  T
744 agtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatat 843  Q
    |||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||||    
21952 agtgtccataattaaacaacacattacaactcattacacatcattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatat 22051  T
844 ataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtatt 943  Q
    ||         | |||||||||||||| |||||||||| |||||||||||| |||   ||||||||||| |||||| |||| | ||||||| ||||||||    
22052 at---------ttttccaccatattccaaaacataaattcgacgtcgctattgtctttaataagccaagacatataacttgtcattttcca-tgcgtatt 22141  T

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Target: scaffold0513 (Bit Score: 149; Significance: 3e-78; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 489 - 842
Target Start/End: Original strand, 8258 - 8602
Alignment:
489 gtagttaactgccgaggaaaaca-attatgcagacagtggtttctgcataattgttaagcatttcaaagccattttt-cgactagtttttacctgtaatt 586  Q
    ||||||||||||| ||||||||  |||||||||||||||| |||||||||||| | || |||||| ||||||||||| || | |||||||||||||||||    
8258 gtagttaactgccaaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaatt 8356  T
587 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaat 686  Q
     ||||| ||||||||||||||||| |||| | |||||| ||| |||||| | ||||| ||||  || ||||||||| ||||||||||| |||||||||||    
8357 aaaccaaagcatttccaaaggcaaaataattcatacaagattgaaactcgggcataatcaagataagtacaatatcttttacaattgttcataattaaat 8456  T
687 caaaccgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatca 786  Q
     ||||| |||||||||| ||| || ||||| ||||||||||||| ||| | ||||| |||||||||   |||          ||||||||||||||||||    
8457 taaaccaacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa----------acaactcattacacatca 8546  T
787 ttaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacata 842  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
8547 ttaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacata 8602  T

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Target: scaffold0169 (Bit Score: 115; Significance: 6e-58; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 491 - 669
Target Start/End: Complemental strand, 1695 - 1517
Alignment:
491 agttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaatttaac 590  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |  |||||||| ||||||||||||| | ||||||||||||||||| |||    
1695 agttaactgctgaggaaaacaattatgcagacagtgggttctgcataattctatagcatttccaagccatttttcggccagtttttacctgtaattaaac 1596  T
591 cagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttaca 669  Q
    ||||||||||||||||||||||||| | |||||||||| |||||| ||||||| |||| ||||||||||||| ||||||    
1595 cagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttaca 1517  T

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Target: scaffold0169; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 798 - 948
Target Start/End: Complemental strand, 10978 - 10829
Alignment:
798 ccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgt 897  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
10978 ccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgt 10879  T
898 cgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    | | ||||||||||| |||||||||||| |||||||| |||||||||||||    
10878 cacgaataagccaaggcatatagcttgctgttttcca-tgcgtattcatct 10829  T

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Target: scaffold0011 (Bit Score: 110; Significance: 6e-55; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 489 - 730
Target Start/End: Complemental strand, 236248 - 236008
Alignment:
489 gtagttaactgccgaggaaaacaattatgcagacagtggtttctgcataattgttaagcatttcaaagccatttttcgactagtttttacctgtaattta 588  Q
    |||||||||||||||||||| |   | |||||||||||   ||||||| ||| | || |||||| || || ||||||||| ||||||||||||||||| |    
236248 gtagttaactgccgaggaaatctgat-tgcagacagtgagctctgcatcattctaaaacatttccaaaccttttttcgaccagtttttacctgtaattaa 236150  T
589 accagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatca 688  Q
    ||||||||||||| |||||||| | || | |||||| ||| |||||||| ||||| ||||  |||||||||||| |||||||||||||||||||||||||    
236149 accagagcatttcgaaaggcaaaacaattcatacaatattgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatca 236050  T
689 aaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    || |||||||||||||||| |||||||| |||||||||||||    
236049 aatcgacatttggttcaaattacacaaacgtttgaaattcat 236008  T

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Target: scaffold0794 (Bit Score: 106; Significance: 2e-52; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 775 - 948
Target Start/End: Complemental strand, 1488 - 1316
Alignment:
775 cattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaa 874  Q
    ||||||||||||||| ||||||||| ||||||||| || | |||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||    
1488 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 1389  T
875 cataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccattgcgtattcatct 948  Q
    |||||||||||||||||||| |||   |||||| |||| ||||||||||||||||||||| |||||||||||||    
1388 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttcca-tgcgtattcatct 1316  T

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Target: scaffold0199 (Bit Score: 92; Significance: 3e-44; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 547 - 730
Target Start/End: Original strand, 12521 - 12704
Alignment:
547 catttcaaagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataagca 646  Q
    |||||| ||||| ||||||| | ||||||||||||||||| |||||||||||||| ||| |||| | || | |||||||||| |||||| | ||||| ||    
12521 catttccaagccttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaagcaaaacaattcatacaacattgaaactcggacataaaca 12620  T
647 agtaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcat 730  Q
    ||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||| ||||||||    
12621 agataaatacaatatcttttacaattgtccataattaaatcaaaccgacattttgtttaaattacacaaacgtttaaaattcat 12704  T

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Target: scaffold1379 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 570 - 501
Alignment:
403 aattgttgttgacacatttcataag-ctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 471  Q
    ||||| |||| |||||||| ||||| |||||||||| |||||||||||| ||||| |||| |||||||||    
570 aattgatgtttacacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagtta 501  T

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