View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2857_high_4 (Length: 372)
Name: NF2857_high_4
Description: NF2857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2857_high_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 7 - 372
Target Start/End: Original strand, 26126305 - 26126681
Alignment:
| Q |
7 |
tccaagaatatatttcctactccaaatctttcttctaacctaaaaatataaaatctttttactgagatgactggatgagggaacttagcggtaccccatg |
106 |
Q |
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| T |
26126305 |
tccaacaatatatttcctactccaaatctttcttctaacctaaaaatataaaatctttttactgggatgactggatgagggaacttagcggcaccccgtg |
26126404 |
T |
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| Q |
107 |
gaaaactggcaataaataaggtggaggaaggggcttccttgca---------aacctagtcacccccactgattggtaacaaaa--aatggcaacaaaaa |
195 |
Q |
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| T |
26126405 |
gaaaactggcaataaataaggtggaggaaggggctcccttgcatatgcatcaaacctagttacccccactgattggtaacaaaaaaaatggcaacaaaaa |
26126504 |
T |
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| Q |
196 |
agagccaacactgaacaagttttggatatttgttaaatttttcccacttctagatatctcacatcgattctgagttttggatagttgtgtgacggcagca |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
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| T |
26126505 |
agagccaacactgaacaagttttggatatttgttaaatttttcccacttctagatatctcacatcgattttgagttttggatagttgtgtaacggcagca |
26126604 |
T |
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| Q |
296 |
aggattttaactgagggagaagatgcatccggaaggtgacaagacgagtaatttgaagacaatgattaatgagtaat |
372 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
26126605 |
aggattttaactgagggagaagatgcatccggaaggtgacgagacgagtaatttgaagacaatgattaatgagtaat |
26126681 |
T |
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