View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2857_low_16 (Length: 216)
Name: NF2857_low_16
Description: NF2857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2857_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 12974822 - 12974653
Alignment:
| Q |
20 |
gatcgaacctttagccttaaagtcataatatatataattcaaaatgcttatttttggttgagaaattcaacatataggaaaaattcaaattgcacactcg |
119 |
Q |
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| T |
12974822 |
gatcgaacctttagccttaaagtcataataaata------aaaatgcttatttttggttgagaaattcaacatataggaaaaattcaaattgcacactcg |
12974729 |
T |
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| Q |
120 |
cattgtgtatagccttacgctcattgtgtgtgatgttcaataatccacatggccagctccatcttaaagatgcgca |
195 |
Q |
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| T |
12974728 |
cattgtgtatagccttacgctcatcgtgtgtgatgttcaataatccacatggccagctccatcttaaagatgcgca |
12974653 |
T |
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