View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2858_high_21 (Length: 250)
Name: NF2858_high_21
Description: NF2858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2858_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 11224870 - 11224626
Alignment:
| Q |
1 |
cataatttccatcattctttattaaagttgacaaaataacctcgcttcgacatacaggccttcctaattgttgttcctaacatcataaataaaatgtaaa |
100 |
Q |
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| T |
11224870 |
cataatttccatcattctttattaaagttgacaaaataacctcgcttcgacatacaggccttcctaattgttgttcctaacatcataaataaaatgtaaa |
11224771 |
T |
|
| Q |
101 |
ttaagaactcatcaataacagctttgttgggatacataaatattttgaatctgcttaccattagacgaccccttcttgcgttgctcctactaccaccaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
11224770 |
ttaagaactcatcaataacagctttgttgggatacataaatattttgaatctgcttaccattagacgaccccttcttgcgttgctcctactaccaccagc |
11224671 |
T |
|
| Q |
201 |
atgtgggactttaagcttcttacgattttcggtattcatctcact |
245 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
11224670 |
atgtgggactttaagcttcttacgattttcggtattcttctcact |
11224626 |
T |
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