View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2858_high_22 (Length: 243)
Name: NF2858_high_22
Description: NF2858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2858_high_22 |
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Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 18255996 - 18256215
Alignment:
| Q |
18 |
aggaggaagttgttgggattataactttggaagatgtcatggaagagctacttcaggttagtcttacttcctatcatagtacaataatttttgttcgtct |
117 |
Q |
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| T |
18255996 |
aggaggaagttgttgggattataactttggaagatgtcatggaagagctacttcaggttagtcttacttcctatcatagtacaataatttttgttcatct |
18256095 |
T |
|
| Q |
118 |
tcagaccctctgtaaaatgtgtgtcgagtcgcgtggatcatactctttttagggtaaaactcctttttgagccgannnnnnnnattcacaagactcaaac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
18256096 |
tcagaccctctgtaaaatgtgtgtcgagtcgcgtggatcatactctttttagggtaaaactcctttttgagccgattttttctattcacaagactcaaac |
18256195 |
T |
|
| Q |
218 |
ttaaattttattgaaaagat |
237 |
Q |
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|||| ||||||||||||||| |
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| T |
18256196 |
ttaagttttattgaaaagat |
18256215 |
T |
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