View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2858_low_26 (Length: 243)

Name: NF2858_low_26
Description: NF2858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2858_low_26
NF2858_low_26
[»] scaffold1301 (1 HSPs)
scaffold1301 (5-243)||(1658-1896)
[»] chr7 (15 HSPs)
chr7 (7-155)||(14816638-14816786)
chr7 (7-155)||(15263634-15263782)
chr7 (7-155)||(46254870-46255021)
chr7 (15-155)||(35794491-35794631)
chr7 (7-151)||(43458191-43458334)
chr7 (7-155)||(25529091-25529239)
chr7 (7-155)||(34847857-34848008)
chr7 (15-155)||(33950943-33951086)
chr7 (7-155)||(36312064-36312214)
chr7 (108-153)||(44866155-44866200)
chr7 (8-123)||(1377355-1377470)
chr7 (7-86)||(42321186-42321265)
chr7 (7-68)||(44863021-44863082)
chr7 (7-91)||(31326669-31326753)
chr7 (7-67)||(1852154-1852214)
[»] chr5 (22 HSPs)
chr5 (7-155)||(27114309-27114457)
chr5 (5-155)||(8197411-8197564)
chr5 (7-155)||(8734699-8734846)
chr5 (7-155)||(37012829-37012977)
chr5 (9-140)||(37883431-37883562)
chr5 (7-155)||(12785159-12785310)
chr5 (7-155)||(18808986-18809137)
chr5 (7-140)||(37030261-37030394)
chr5 (7-153)||(3556626-3556772)
chr5 (7-155)||(12723676-12723827)
chr5 (7-155)||(38679434-38679585)
chr5 (9-140)||(26279041-26279172)
chr5 (15-151)||(13822058-13822197)
chr5 (7-149)||(16513581-16513725)
chr5 (7-140)||(25977135-25977264)
chr5 (7-140)||(9715312-9715445)
chr5 (17-140)||(11719938-11720061)
chr5 (49-155)||(8299204-8299313)
chr5 (15-64)||(15858831-15858880)
chr5 (197-243)||(25976968-25977014)
chr5 (9-52)||(2606076-2606119)
chr5 (15-64)||(23252487-23252536)
[»] chr4 (31 HSPs)
chr4 (7-155)||(33281091-33281239)
chr4 (7-155)||(51538650-51538798)
chr4 (7-153)||(52416917-52417066)
chr4 (7-153)||(31093111-31093257)
chr4 (7-153)||(35158724-35158870)
chr4 (7-155)||(16023878-16024026)
chr4 (15-155)||(28780760-28780900)
chr4 (7-155)||(1602789-1602936)
chr4 (15-155)||(40728039-40728179)
chr4 (15-155)||(45229083-45229223)
chr4 (7-155)||(49374323-49374470)
chr4 (7-140)||(168540-168673)
chr4 (5-153)||(45462254-45462402)
chr4 (9-140)||(38551270-38551401)
chr4 (7-140)||(2013733-2013866)
chr4 (7-140)||(4189874-4190007)
chr4 (7-153)||(30003616-30003764)
chr4 (7-140)||(28310890-28311024)
chr4 (7-140)||(4048138-4048271)
chr4 (5-155)||(43841859-43842012)
chr4 (7-148)||(9036089-9036232)
chr4 (7-140)||(6963459-6963592)
chr4 (7-155)||(38218247-38218398)
chr4 (19-140)||(45924615-45924736)
chr4 (7-148)||(55136670-55136814)
chr4 (7-140)||(15542841-15542973)
chr4 (22-155)||(56463631-56463767)
chr4 (7-140)||(16451935-16452068)
chr4 (7-140)||(35319896-35320029)
chr4 (15-67)||(20516682-20516734)
chr4 (7-67)||(39807350-39807410)
[»] chr8 (24 HSPs)
chr8 (7-153)||(39318582-39318728)
chr8 (7-153)||(8239974-8240120)
chr8 (7-153)||(40105236-40105382)
chr8 (8-153)||(35684002-35684147)
chr8 (7-151)||(11076233-11076377)
chr8 (7-140)||(6347300-6347433)
chr8 (7-140)||(37098338-37098471)
chr8 (7-140)||(43098545-43098678)
chr8 (7-155)||(39260274-39260425)
chr8 (9-140)||(20091867-20091998)
chr8 (7-140)||(23144107-23144241)
chr8 (15-140)||(627387-627512)
chr8 (7-140)||(32337815-32337948)
chr8 (15-140)||(586411-586536)
chr8 (7-140)||(31701047-31701177)
chr8 (7-98)||(32947084-32947175)
chr8 (108-155)||(42131885-42131932)
chr8 (101-140)||(13546259-13546298)
chr8 (101-140)||(13678175-13678214)
chr8 (202-243)||(586244-586285)
chr8 (202-243)||(627638-627679)
chr8 (197-243)||(32338069-32338115)
chr8 (197-241)||(6347554-6347598)
chr8 (7-39)||(42131969-42132001)
[»] chr3 (24 HSPs)
chr3 (7-155)||(47646921-47647072)
chr3 (7-155)||(26502173-26502324)
chr3 (7-155)||(149331-149479)
chr3 (7-154)||(47013701-47013848)
chr3 (7-155)||(10509203-10509354)
chr3 (7-140)||(32529804-32529937)
chr3 (7-155)||(36402692-36402843)
chr3 (5-155)||(39586576-39586726)
chr3 (7-140)||(6936472-6936605)
chr3 (7-143)||(227634-227770)
chr3 (7-151)||(40937222-40937366)
chr3 (7-140)||(41193717-41193850)
chr3 (15-140)||(39353310-39353435)
chr3 (9-140)||(49166110-49166240)
chr3 (7-135)||(31765207-31765335)
chr3 (9-98)||(41174816-41174905)
chr3 (108-153)||(41182006-41182051)
chr3 (7-68)||(33843521-33843582)
chr3 (7-68)||(42899222-42899283)
chr3 (7-68)||(51329000-51329061)
chr3 (170-234)||(32530017-32530081)
chr3 (15-73)||(53393958-53394016)
chr3 (202-243)||(31765037-31765078)
chr3 (8-68)||(25214606-25214666)
[»] chr2 (23 HSPs)
chr2 (15-155)||(44760105-44760245)
chr2 (15-155)||(6404128-6404268)
chr2 (7-155)||(15911780-15911931)
chr2 (7-140)||(13278698-13278831)
chr2 (7-155)||(17308962-17309112)
chr2 (15-155)||(30490662-30490805)
chr2 (7-155)||(38703569-38703719)
chr2 (7-153)||(17137689-17137842)
chr2 (7-155)||(45117075-45117230)
chr2 (7-140)||(7942742-7942875)
chr2 (7-140)||(31994077-31994210)
chr2 (9-140)||(1209930-1210062)
chr2 (10-136)||(18137596-18137722)
chr2 (7-85)||(38207489-38207567)
chr2 (81-155)||(38208410-38208487)
chr2 (17-98)||(1114722-1114803)
chr2 (205-243)||(7942576-7942614)
chr2 (7-68)||(21485330-21485391)
chr2 (5-68)||(37127964-37128027)
chr2 (205-243)||(31993910-31993948)
chr2 (202-243)||(1115362-1115403)
chr2 (108-140)||(1115204-1115236)
chr2 (8-68)||(33945933-33945993)
[»] chr1 (26 HSPs)
chr1 (7-155)||(37952305-37952453)
chr1 (9-151)||(29961404-29961546)
chr1 (5-155)||(44496488-44496638)
chr1 (9-140)||(41086406-41086537)
chr1 (9-140)||(41091174-41091305)
chr1 (7-155)||(14587322-14587476)
chr1 (7-140)||(11952421-11952554)
chr1 (15-152)||(42882578-42882715)
chr1 (7-140)||(50261992-50262125)
chr1 (15-140)||(41900288-41900413)
chr1 (7-140)||(49851713-49851846)
chr1 (7-155)||(33801368-33801519)
chr1 (7-140)||(38860681-38860814)
chr1 (7-138)||(52632362-52632493)
chr1 (5-140)||(12528448-12528583)
chr1 (7-140)||(23984039-23984169)
chr1 (15-155)||(12700521-12700664)
chr1 (7-155)||(3517560-3517708)
chr1 (7-148)||(41723533-41723676)
chr1 (7-135)||(27216803-27216931)
chr1 (7-90)||(44757581-44757664)
chr1 (104-155)||(22858800-22858851)
chr1 (82-155)||(48964913-48964986)
chr1 (197-243)||(49851967-49852013)
chr1 (214-243)||(42882441-42882470)
chr1 (15-56)||(48964984-48965025)
[»] chr6 (8 HSPs)
chr6 (7-155)||(9304938-9305086)
chr6 (7-155)||(31271354-31271502)
chr6 (7-139)||(31318539-31318671)
chr6 (10-153)||(31722855-31723001)
chr6 (7-155)||(439036-439187)
chr6 (7-155)||(16395320-16395471)
chr6 (7-149)||(303759-303904)
chr6 (7-123)||(20818537-20818653)
[»] scaffold0054 (1 HSPs)
scaffold0054 (10-91)||(19071-19152)


Alignment Details
Target: scaffold1301 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 1658 - 1896
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1658 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcctatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 1757  T
Q  105 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggattccggaacataaccattccctcgttcacaattatcactttaatccgtaaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1758 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggattccggaacataaccattccctcgttcacaattatcactttaatccgtaaa 1857  T
Q  205 acaaaggtacatttcggattttattttccggaatgcatc 243  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1858 acaaaggtacatttcggattttattttccggaatgcatc 1896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 14816786 - 14816638
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  14816786 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 14816687  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14816686 ggttgtaaccgtccaaacccacattaatggctctggatctttctggatt 14816638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 15263782 - 15263634
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  15263782 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 15263683  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  15263682 ggttgtaaccgtccaaacccacattaatggctctggatctttctggatt 15263634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 46254870 - 46255021
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  46254870 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 46254969  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   |||||||||||||||||||||||||||||||||||||||||| |||||    
T  46254970 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttctggatt 46255021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 35794491 - 35794631
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  35794491 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 35794590  T
Q  115 ccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  35794591 ccgtccaaatccatattaatggctctaaatctttccggatt 35794631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 43458191 - 43458334
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || | || ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  43458191 aggtgaagtgaagaatgaaggtatttgttgaagatgta-gcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaacgtgttagt 43458289  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43458290 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 43458334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 25529239 - 25529091
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||| |||| ||| ||  || |||    
T  25529239 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacaatcaatgaatacgtgtcagt 25529140  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  25529139 ggttgtaaccgtccaaacccacattaatgactctgaatctttctggatt 25529091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 34848008 - 34847857
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||||||||||| |||||||| ||||||| |||||||||  ||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  34848008 aggtgaagtgaagaatgaaggtatctgttgaagatggaagcctatttatagcataaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 34847909  T
Q  107 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||   ||||||| |||||||||||||||||||||||||||||||||||||||    
T  34847908 ggttgttgtaactgtccaaacccacattaatggctctgaatctttccggatt 34847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 33950943 - 33951086
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtg---gttg 111  Q
    |||||||| |||||||||||||||| | ||| ||||||||||| |||||||||| | || ||||||||||||||||| ||||||  |||||||   ||||    
T  33950943 tgaagaataaaggtatttgttgaagatagaaacttatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttg 33951042  T
Q  112 taaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  33951043 taaccatccaaacccacattaatggctctgaatcgttccggatt 33951086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 36312214 - 36312064
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||| ||||||| |||||||||||| ||||||  |||| |||| ||||||||||   || |||||||||||||||||  |||||  ||||||    
T  36312214 aggtgaagtgaacaatgaagatatttgttgaagatggaagtctatt-atagcctaaaacaagttctaggtcattaatacagtcaataaaaacgtgttagt 36312116  T
Q  107 ggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  36312115 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 36312064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 44866155 - 44866200
Alignment:
Q  108 gttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  44866155 gttgtaaccgtccaaacccacaataatggctctgaatctttccgga 44866200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 1377355 - 1377470
Alignment:
Q  8 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtg 107  Q
    |||||| ||||||||||||  ||||||||||| ||||||| ||||||||| |||||| ||| | || ||||| | ||||||||| ||||||  ||| |||    
T  1377355 ggtgaagtgaagaatgaagaaatttgttgaagatggaagcctatttatagcctaaaataagtcatatgtcataagtacagtcaatgaaaacgtgtttgtg 1377454  T
Q  108 gttgtaaccgtccaaa 123  Q
    ||  ||||| ||||||    
T  1377455 gtgctaaccatccaaa 1377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 42321265 - 42321186
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaataca 86  Q
    ||||||| |||||||||||| |||||||||||| ||||||| ||||||||  |||||||||| | || || |||||||||    
T  42321265 aggtgaagtgaagaatgaagatatttgttgaagatggaagcctatttataacctaaaacaagtcataggttattaataca 42321186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 44863021 - 44863082
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    ||||||| ||||||||||||||||||||| ||| | ||||| |||||||||  |||||||||    
T  44863021 aggtgaagtgaagaatgaaggtatttgttcaagattgaagcatatttatagcttaaaacaag 44863082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 31326753 - 31326669
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaa 91  Q
    ||||||| ||||||||||||  ||||||||||| || || | |||||||||| ||||||||| | ||| |||| | |||||||||    
T  31326753 aggtgaagtgaagaatgaagaaatttgttgaagatgcaaacctatttatagtataaaacaagtcctaaatcataattacagtcaa 31326669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 1852154 - 1852214
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaa 67  Q
    ||||||| |||||||||||||  |||||| ||| || |||||||| ||||| |||||||||    
T  1852154 aggtgaagtgaagaatgaaggactttgttcaagatgcaagcttatatatagcctaaaacaa 1852214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 27114309 - 27114457
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||| ||    
T  27114309 aggtgaagtgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaacgtgttggt 27114408  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27114409 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 27114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 8197411 - 8197564
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    |||||| || ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||    
T  8197411 ataggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgtta 8197510  T
Q  105 gtg---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||   ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8197511 gtggttgttgtaaccgtccaaacccacattaatggctctaaatctttccggatt 8197564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 8734699 - 8734846
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||| | | ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  8734699 aggtgaagtgaagaatgaaggtatttgttca-gatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 8734797  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8734798 ggttgtaatcgtccaaacccacattaatggctctgaatctttccggatt 8734846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 37012829 - 37012977
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||   || |||||| |||||||||| ||||||  ||||||    
T  37012829 aggtgaagtgaagaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaagttctaggtcattcatacagtcaatgaaaacgtgttagt 37012928  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37012929 ggttgtaaccgtccaaacccacattaatggctctgaatcttttcggatt 37012977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 37883431 - 37883562
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||||  ||||||||| |||| ||||||| || |||||| ||||||| ||||||||    
T  37883431 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcttaaaacaagtcttaggtcattactatagtcaatgaaaacatgttagtgg 37883530  T
Q  109 ttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||||||||||||    
T  37883531 ttgtaaccgtccaaacccacattaatggctct 37883562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 12785159 - 12785310
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  12785159 aggtgaagtgaagaatgaaggtatttgttgaagattgaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 12785258  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  12785259 ggttgttgtaaccgtccaaacccacattaacggctatgaatctttccggatt 12785310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 18808986 - 18809137
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  18808986 aggtgaagtgaagaatgaaggtatttgttgaagatggaagactatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 18809085  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  18809086 ggttgttgtaaccgtccaaacctacattaatggctctgaatcttttcggatt 18809137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 37030394 - 37030261
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  37030394 aggtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 37030295  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||| |||||||||||||||||||||||    
T  37030294 ggttgtaaccatccaaacccacattaatggctct 37030261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 153
Target Start/End: Original strand, 3556626 - 3556772
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||| ||||||| ||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  3556626 aggtgaagtgaagaatgaaggaatttgttaaagatggaagcatatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 3556725  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    | |||||| |||||||||||||| ||| ||||| |||||||||||||    
T  3556726 gcttgtaatcgtccaaacccacaataacggctccgaatctttccgga 3556772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 12723676 - 12723827
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || || | ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  12723676 aggtgaagtgaagaatgaaggtatttgttgaagatgaaaacctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 12723775  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   |||||||||||||||||||||||||| | || ||||||||||||||||    
T  12723776 ggttgttgtaaccgtccaaacccacattaacgactatgaatctttccggatt 12723827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 38679585 - 38679434
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||| || |||||||||||| | ||||| ||||||||| |||||||||| | |||||||||||||||||||| | |||   ||||||    
T  38679585 aggtgaagtgaagaatgtagatatttgttgaagattgaagcctatttatagcctaaaacaagtcctaagtcattaatacagtcaatgcaaaagtgttagt 38679486  T
Q  107 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||   ||||||||||||||| |||||||||||||||||||||||||||||||    
T  38679485 ggttgttgtaaccgtccaaatccacattaatggctctgaatctttccggatt 38679434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 26279041 - 26279172
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |  ||||||| ||||||||| ||||||  ||||||||    
T  26279041 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctgggtcattagtacagtcaatgaaaacgtgttagtgg 26279140  T
Q  109 ttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||| ||||||||| ||||    
T  26279141 ttgtaaccgtccaaacctacattaatgactct 26279172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 13822197 - 13822058
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg---ttg 111  Q
    ||||||||||||||||||||||||| ||||| | ||||||||| |||||||||| | ||  |||||||||||||||| ||||||  ||||||||   |||    
T  13822197 tgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcatagatcattaatacagtcaatgaaaacgtgttagtggttgttg 13822098  T
Q  112 taaccgtccaaacccacattaatggctctgaatctttccg 151  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  13822097 taaccgttcaaatccacattaatggctctgaatctttccg 13822058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 16513725 - 16513581
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||  | ||||| |||||||||| ||||||||| | || ||||||||||||||| | ||||||  ||||||    
T  16513725 aggtgaagtgaagaatgaaggtatttgttgaaaattgaagcctatttatagtttaaaacaagtcataggtcattaatacagtcgatgaaaacgtgttagt 16513626  T
Q  107 ggttgt--aaccgtccaaacccacattaatggctctgaatctttc 149  Q
    ||||||   | ||| |||| ||||| |||||||||||||||||||    
T  16513625 ggttgttgtaacgtacaaaaccacaataatggctctgaatctttc 16513581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 25977264 - 25977135
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||    ||||||| ||||||| ||||||||  |||||||||| | |||||||||| ||||||||| ||||||  ||||||    
T  25977264 aggtgaagtgaagaatgaaggt----gttgaagatggaagcctatttataacctaaaacaagtcctaagtcattactacagtcaatgaaaacgtgttagt 25977169  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||| |||||||||| ||||||||| ||||    
T  25977168 ggttgtaatcgtccaaacctacattaatgactct 25977135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 9715445 - 9715312
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||||||| |||||||||||| ||||||  ||||||||| |||||| ||| | || ||||||| | ||||||| ||||||  ||| ||    
T  9715445 aggtgaagtgaagaatgaagctatttgttgaagatggaagtctatttatagcctaaaaaaagtcataggtcattagtgcagtcaatgaaaacgtgttggt 9715346  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||| |||| |||| ||||    
T  9715345 ggttgtaaccgtccaaacctacatcaatgactct 9715312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 11720061 - 11719938
Alignment:
Q  17 aagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaacc 116  Q
    ||||||||||||||||||||||| || |||  ||||||| | |||||| ||| | || ||||||| ||||||||| ||||||  ||||||||| ||||||    
T  11720061 aagaatgaaggtatttgttgaagatgaaagtctatttatggcctaaaataagtcctaggtcattagtacagtcaatgaaaacgtgttagtggtcgtaacc 11719962  T
Q  117 gtccaaacccacattaatggctct 140  Q
    || |||||| ||||||||||||||    
T  11719961 gttcaaacctacattaatggctct 11719938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 8299313 - 8299204
Alignment:
Q  49 tatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgt---aaccgtccaaacccacattaatggctctgaatc 145  Q
    ||||||||| |||||||||  |||| |||||||||||||||||  |||||  ||| ||||||||   |||||| |||||||| ||||||| |||||||||    
T  8299313 tatttatagcctaaaacaattcttaggtcattaatacagtcaataaaaacgtgttggtggttgttgtaaccgttcaaacccaaattaatgactctgaatc 8299214  T
Q  146 tttccggatt 155  Q
    ||||||||||    
T  8299213 tttccggatt 8299204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 15858831 - 15858880
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaa 64  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  15858831 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaa 15858880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 25977014 - 25976968
Alignment:
Q  197 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatc 243  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||    
T  25977014 tccggaaaacaaaggtacattccggattttattttccggactgcatc 25976968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 2606119 - 2606076
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatt 52  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||    
T  2606119 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatt 2606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 23252487 - 23252536
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaa 64  Q
    ||||||||||||| ||||||| ||| || ||| |||||||||||||||||    
T  23252487 tgaagaatgaaggaatttgtttaagatgcaagtttatttatagtctaaaa 23252536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 33281091 - 33281239
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| |||| |||||||||||| |||| ||||||  ||||||    
T  33281091 aggtgaagtgaagaatgaaggtatttgttgaagatgtaagcctatttatagcctaaaacaagtcttaggtcattaatacaatcaatgaaaacgtgttagt 33281190  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33281191 ggttgtaaccgtccaaacccacattaatggctctgaatctttctggatt 33281239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 51538650 - 51538798
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |||||||||||||||||||| ||||||| ||| ||    
T  51538650 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcatatttatagcctaaaacaagtcctaagtcattaatacagtcaatgaaaacatgttggt 51538749  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  51538750 ggttgcaactgtccaaacccacattaatggccctgaatctttccggatt 51538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 52417066 - 52416917
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||||| |||||||||||||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||||| ||||||  ||||||    
T  52417066 aggtgaagtgaagaatgagggtatttgttgaagatggaagcctatttatagcctaaaacaagtcttaggtcattaatacagtcaatgaaaacgtgttagt 52416967  T
Q  107 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||   |||||||||||||||||||||||||||||||||||||||||||||    
T  52416966 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccgga 52416917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 153
Target Start/End: Original strand, 31093111 - 31093257
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| || | |  ||||||    
T  31093111 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgagatcgtgttagt 31093210  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  31093211 ggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 31093257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 153
Target Start/End: Original strand, 35158724 - 35158870
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||||| || ||||||  ||||||    
T  35158724 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtaaatgaaaacgtgttagt 35158823  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||    
T  35158824 ggttctaaccgtccaaacccacaataatggctctgaatctttccgga 35158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 16023878 - 16024026
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||  ||||||| ||||||||| |||||||||| | || || |||||||||||||| ||||||  ||||||    
T  16023878 aggtgaagtgaagaatgaaggtatttgttgaatatggaagcctatttatagcctaaaacaagtcataggttattaatacagtcaatgaaaacgtgttagt 16023977  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16023978 ggttgcaaccgtccaaacccacattaatgactctgaatctttccggatt 16024026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 28780900 - 28780760
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  28780900 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcatatgtcattaatacagtcaatgaaaacgtgttagtggttgtaa 28780801  T
Q  115 ccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||| ||||| |||||||||||||||||||||||||| ||||    
T  28780800 ccgcccaaaaccacattaatggctctgaatctttccagatt 28780760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 1602789 - 1602936
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || |||||||||||||||||  |||||  ||||||    
T  1602789 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaa-taaaacgtgttagt 1602887  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  1602888 ggttgtaaccgtccaaatccacattaatgactctgaatctttccggatt 1602936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 40728039 - 40728179
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  40728039 tgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 40728138  T
Q  115 ccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    || |||| |||||||||||||||| ||||||||||||||||    
T  40728139 ccatccatacccacattaatggctatgaatctttccggatt 40728179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 45229083 - 45229223
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    |||||||||||  |||||||||||| ||||| | ||||||||| |||||||||| | || ||||||||||||||| | ||||||  ||||||||||||||    
T  45229083 tgaagaatgaatatatttgttgaagatggaatcctatttatagcctaaaacaagtcctaggtcattaatacagtccatgaaaacgtgttagtggttgtaa 45229182  T
Q  115 ccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45229183 ccgtccaaacccacattaatggctctgaatctttccggatt 45229223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 49374323 - 49374470
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||| |||| |||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  49374323 aggtgaagtgaagaatggaggtttttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcatta-tacagtcaatgaaaacgtgttagt 49374421  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49374422 ggttgtaactgtccaaacccacattaatggctctgaatctttccggatt 49374470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 168673 - 168540
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  168673 aggtgaagtgaagaatgaaggtatttgttgaagatggaaggctatttatagtctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 168574  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||| ||||||||||||||||| |||||||    
T  168573 ggttgtaaacgtccaaacccacattagtggctct 168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 45462254 - 45462402
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    ||||||||| |||||||||||| |||||||||||| || |||  ||||||||| |||||||||| | ||  |||||||||||||||| ||||||  || |    
T  45462254 ataggtgaagtgaagaatgaagatatttgttgaagatgaaagtctatttatagcctaaaacaagtcatagatcattaatacagtcaatgaaaacgtgtca 45462353  T
Q  105 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45462354 gtggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 45462402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 38551401 - 38551270
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||||    
T  38551401 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattagtacagtcaatgaaaacgtgttagtgg 38551302  T
Q  109 ttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||| ||||||||||||||    
T  38551301 ttgtaaccgtccaaacctacattaatggctct 38551270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 2013866 - 2013733
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| |||||||  |||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  2013866 aggtgaagtgaagaatgaaggtatttgttgaagatggaagccaatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 2013767  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||| ||||||||||| ||||    
T  2013766 ggttgtaaccgtccaaatccacattaatgactct 2013733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 4190007 - 4189874
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||| ||||||  |||||  ||||||    
T  4190007 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatatagtcaataaaaacgtgttagt 4189908  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||||||||| ||||    
T  4189907 ggttgtaaccgtccaaacccacattaatgactct 4189874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 153
Target Start/End: Original strand, 30003616 - 30003764
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaa--aacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||  |||||| | || ||||||||||||||||| ||||||  ||||    
T  30003616 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaataaacaagtcctaggtcattaatacagtcaatgaaaacgtgtta 30003715  T
Q  105 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
     || ||||||||||||||||||||| ||||| |||||||||||||||||    
T  30003716 ttgcttgtaaccgtccaaacccacaataatgactctgaatctttccgga 30003764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 28311024 - 28310890
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaac-aagccttaagtcattaatacagtcaacgaaaacaagttag 105  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||| ||||||||||| ||||| ||||||  |||||    
T  28311024 aggtgaaatgaagaatgaaggtatttgttgaagatggaagcctatttatagtataaaacaaagtcttaggtcattaatacggtcaatgaaaacgtgttag 28310925  T
Q  106 tggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||| |||||||||||||||| ||||    
T  28310924 tggttgtaaccgttcaaacccacattaatgactct 28310890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 4048138 - 4048271
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || || ||||||||| |||| ||||||  ||||||    
T  4048138 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggttattaatacaatcaatgaaaacgtgttagt 4048237  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||| ||||||||| ||||    
T  4048238 ggttgtaaccgtccaaacctacattaatgactct 4048271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 43842012 - 43841859
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    ||||||||| ||||||||||| ||||||||||||| || |||  ||||||||| |||||||||| | || |||||||||||||||||  |||||   |||    
T  43842012 ataggtgaattgaagaatgaatgtatttgttgaagatgaaagtctatttatagcctaaaacaagtcataggtcattaatacagtcaattaaaacgtctta 43841913  T
Q  105 gtgg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||   |||||||||||||||||||||||||||||| ||||||||||||||||    
T  43841912 gtggttgttgtaaccgtccaaacccacattaatggctatgaatctttccggatt 43841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 9036232 - 9036089
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||| ||||||||||||| || |||| ||||||||| |||||| ||| | |||||||||||||||||||| ||||||  ||||||    
T  9036232 aggtgaaatgaagaatgaatgtatttgttgaagatgaaagcctatttatagcctaaaa-aagtcctaagtcattaatacagtcaatgaaaacgtgttagt 9036134  T
Q  107 ggttgt---aaccgtccaaacccacattaatggctctgaatcttt 148  Q
    ||||||   ||||||||||||||||||||||| ||||||||||||    
T  9036133 ggttgttgtaaccgtccaaacccacattaatgactctgaatcttt 9036089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 6963459 - 6963592
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||| | || ||||||| || |||||| |||||   ||||||    
T  6963459 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaataagtcctaggtcattactatagtcaatgaaaatgtgttagt 6963558  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    | ||||||||||||||||||||||||||||||||    
T  6963559 gattgtaaccgtccaaacccacattaatggctct 6963592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 38218398 - 38218247
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||   || ||||||||||||||||| ||||||  ||||||    
T  38218398 aggtgaagtgaagaatgtaggtatttgttgaagatggaagcctatttataggctaaaacaagttctaggtcattaatacagtcaatgaaaacgtgttagt 38218299  T
Q  107 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||   |||||| ||||||||||||||||| ||||||| || |||||||||||    
T  38218298 ggttgttgtaatcgtccaaacccacattagtggctctaaacctttccggatt 38218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 45924615 - 45924736
Alignment:
Q  19 gaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaaccgt 118  Q
    ||||||||||||||||||||| | ||| | ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||| ||||||    
T  45924615 gaatgaaggtatttgttgaagattgaaacctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgcaaccgt 45924714  T
Q  119 ccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||    
T  45924715 ccaaacccacattaatggctct 45924736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 55136670 - 55136814
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || |||||||||||| |||| || |||  ||||||    
T  55136670 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcataggtcattaatacaatcaatgataacgtgttagt 55136769  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatcttt 148  Q
    |   ||||||||||||||||||||||||||||| | |||||||||    
T  55136770 ggttgttgtaaccgtccaaacccacattaatggatttgaatcttt 55136814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 15542973 - 15542841
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| || |||||| ||||||  ||||||    
T  15542973 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattactatagtcaatgaaaacgtgttagt 15542874  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
     ||| ||||||||||||||||||||||| |||||    
T  15542873 -gttttaaccgtccaaacccacattaattgctct 15542841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 56463767 - 56463631
Alignment:
Q  22 tgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgt---aaccgt 118  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||| |    ||||||||||||||||| |||||   ||||||||||||   ||||||    
T  56463767 tgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtccacggtcattaatacagtcaatgaaaatgtgttagtggttgttgtaaccgt 56463668  T
Q  119 ccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||||||||||||||| || ||||||||||||    
T  56463667 ccaaacccacattaatggctccgagtctttccggatt 56463631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 16451935 - 16452068
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||||||||||| || ||||| ||||||| ||||||||| |||||||||| | ||  |||||| ||||||||| ||||||  ||||||    
T  16451935 aggtgaagtgaagaatgaaggtatctgctgaagatggaagcctatttatagcctaaaacaagtcctagatcattactacagtcaatgaaaacgtgttagt 16452034  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||| |||||  ||||||||| ||||    
T  16452035 ggttgtaaccgttcaaacatacattaatgactct 16452068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 35320029 - 35319896
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| || |||||||| ||||||||||||| ||||||| |||||||||  ||||||||| | || ||||||| || ||| || ||||||  ||||||    
T  35320029 aggtgaagtggagaatgaaagtatttgttgaagatggaagcctatttatagcttaaaacaagtcataggtcattactatagttaatgaaaacgtgttagt 35319930  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
     ||||||||||||||||| |||||||||| ||||    
T  35319929 agttgtaaccgtccaaactcacattaatgactct 35319896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 20516682 - 20516734
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaa 67  Q
    ||||||||||||| ||||||||||| || |||| ||||||||| |||||||||    
T  20516682 tgaagaatgaaggaatttgttgaagatgcaagcctatttatagcctaaaacaa 20516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 39807410 - 39807350
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaa 67  Q
    ||||||| ||||||||||||| ||||||||||| || |||| |||||||||  ||||||||    
T  39807410 aggtgaagtgaagaatgaaggaatttgttgaagatgaaagcctatttatagcgtaaaacaa 39807350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 39318728 - 39318582
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||| |||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  39318728 aggtgaagtgaataatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 39318629  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39318628 ggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 39318582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 8240120 - 8239974
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || || ||||||||||| || ||||||  ||||||    
T  8240120 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgttattaatacagttaatgaaaacgtgttagt 8240021  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8240020 ggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 8239974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 40105382 - 40105236
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  40105382 aggtgaattgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 40105283  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  40105282 ggttgcaaccgtccaaacccacaataatgactctgaatctttccgga 40105236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 35684147 - 35684002
Alignment:
Q  8 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtg 107  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||   |  |||||||| |||||||| ||||||  |||||||    
T  35684147 ggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactgggtcattaaaacagtcaatgaaaacgtgttagtg 35684048  T
Q  108 gttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  35684047 gttgtaaccgtccaaacccacaataatggctctgaatctttccgga 35684002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 11076233 - 11076377
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||| |||||||||||||||  ||||||  |||||||||||||||||||| | || |||||||||||||||||  |||||  ||||||    
T  11076233 aggtgaagtgaagaattaaggtatttgttgaaaatggaagtctatttatagtctaaaacaagtcctaggtcattaatacagtcaataaaaacgtgttagt 11076332  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 151  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  11076333 ggttgtaaccgtccaaacccacaataatgactctgaatctttccg 11076377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 6347300 - 6347433
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||||||| | || ||||||| |||||| || ||||||  ||||||    
T  6347300 aggtgaaatgaagaatgaaggtatttgttgaagatggaagcatgtttatagcctaaaacaagtcctaggtcattagtacagtaaatgaaaacgtgttagt 6347399  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||||||||||||||    
T  6347400 ggttgtaaccgtccaaacccacattaatggctct 6347433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 37098338 - 37098471
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||||||| |||||||||| |  | |||||||||||||||||  |||||  ||||||    
T  37098338 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcttatttatagcctaaaacaagtcccatgtcattaatacagtcaataaaaacgtgttagt 37098437  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||| ||||||||||||||||||||    
T  37098438 ggttgtaaccgtctaaacccacattaatggctct 37098471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 43098678 - 43098545
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| || |||||| ||||||  ||||||    
T  43098678 aggtgaagtgaagaatgaatgtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattattatagtcaatgaaaacgtgttagt 43098579  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||||||||||||||    
T  43098578 ggttgtaaccgtccaaacccacattaatggctct 43098545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 39260425 - 39260274
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta-- 104  Q
    ||||||| ||||||||||| ||||||||||||| | ||||| ||||||||| |||||||||| | || |||||||||||||||||  |||||  ||||      
T  39260425 aggtgaagtgaagaatgaatgtatttgttgaagatagaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaataaaaacgtgttaat 39260326  T
Q  105 -gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
     || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  39260325 ggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggatt 39260274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 20091867 - 20091998
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||| | || ||||||| ||| ||||| ||||||  ||||||||    
T  20091867 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatatatagcctaaaacaagtcctatgtcattactacggtcaatgaaaacgtgttagtgg 20091966  T
Q  109 ttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||| ||||||||| ||||||||||||||    
T  20091967 ttgtaactgtccaaaccgacattaatggctct 20091998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 23144241 - 23144107
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtca-ttaatacagtcaacgaaaacaagttag 105  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||||||| | || |||| ||| ||||||||| ||||||| |||||    
T  23144241 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcatttactacagtcaatgaaaacatgttag 23144142  T
Q  106 tggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||| |||||||||| ||||||||| ||||    
T  23144141 tggttgtaatcgtccaaacctacattaatgactct 23144107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 627387 - 627512
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| ||||  |||||| ||||||||| ||||||  ||||||||||||||    
T  627387 tgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaacaagtcttagttcattagtacagtcaatgaaaacttgttagtggttgtaa 627486  T
Q  115 ccgtccaaacccacattaatggctct 140  Q
    ||||||||| | ||||| ||||||||    
T  627487 ccgtccaaagctacattgatggctct 627512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 32337815 - 32337948
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||| | || ||||||| |||| |||| ||||||  ||||||    
T  32337815 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaccaagtcctaggtcattagtacaatcaatgaaaacgtgttagt 32337914  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    | ||||||||||||||||| ||||| ||||||||    
T  32337915 gattgtaaccgtccaaacctacattgatggctct 32337948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 586536 - 586411
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| ||||  |||||| ||||||||| ||||||  ||||||||||||||    
T  586536 tgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaacaagtcttagttcattagtacagtcaatgaaaacttgttagtggttgtaa 586437  T
Q  115 ccgtccaaacccacattaatggctct 140  Q
    ||||||||| | ||| | ||||||||    
T  586436 ccgtccaaagctacactgatggctct 586411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 31701177 - 31701047
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  |||| |    
T  31701177 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttatt 31701078  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||| ||||||   |||||||||||||| |||||    
T  31701077 ggttataaccg---aaacccacattaatagctct 31701047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 32947084 - 32947175
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaac 98  Q
    ||||||| ||||||||||||||||||||||||| | ||||| || |||||| |||||||||| | || ||||||||||||||||| ||||||    
T  32947084 aggtgaagtgaagaatgaaggtatttgttgaagatagaagcctacttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaac 32947175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 42131932 - 42131885
Alignment:
Q  108 gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  42131932 gttgtaaccgtccaaacccatattaatggctctgaatctttccggatt 42131885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 13546298 - 13546259
Alignment:
Q  101 gttagtggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13546298 gttagtggttgtaaccgtccaaacacacattaatggctct 13546259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 13678175 - 13678214
Alignment:
Q  101 gttagtggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13678175 gttagtggttgtaaccgtccaaacacacattaatggctct 13678214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 586285 - 586244
Alignment:
Q  202 aaaacaaaggtacatttcggattttattttccggaatgcatc 243  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  586285 aaaacaaagctacattccggattttattttccggaatgcatc 586244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 627638 - 627679
Alignment:
Q  202 aaaacaaaggtacatttcggattttattttccggaatgcatc 243  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  627638 aaaacaaagctacattccggattttattttccggaatgcatc 627679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 32338069 - 32338115
Alignment:
Q  197 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatc 243  Q
    |||| ||||||||||| |||| |||||||||||||| ||||||||||    
T  32338069 tccggaaaacaaaggtgcattccggattttattttctggaatgcatc 32338115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 6347554 - 6347598
Alignment:
Q  197 tccgtaaaacaaaggtacatttcggattttattttccggaatgca 241  Q
    |||| ||||||||||| |||||| |||||||||||| ||||||||    
T  6347554 tccggaaaacaaaggtgcatttcagattttattttctggaatgca 6347598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 42132001 - 42131969
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaag 39  Q
    ||||||| |||||||||||||||||||||||||    
T  42132001 aggtgaagtgaagaatgaaggtatttgttgaag 42131969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 47646921 - 47647072
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  47646921 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 47647020  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47647021 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 47647072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 26502324 - 26502173
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  26502324 aggtgaagtgaagaatgtaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 26502225  T
Q  107 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||   ||||||| |||||||||||||||||||||||||||||||||||||||    
T  26502224 ggttgttgtaactgtccaaacccacattaatggctctgaatctttccggatt 26502173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 149331 - 149479
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  149331 aggtgaagtgaagaatgtaagtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 149430  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  149431 ggttgtaaccgtccaaacccacgttaatgactctgaatctttccggatt 149479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 47013848 - 47013701
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||| | ||||||||| |||||||||| | || ||||||||||| ||||| ||||||  ||||||    
T  47013848 aggtgaagtgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcctaggtcattaatacggtcaatgaaaacgtgttagt 47013749  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggat 154  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  47013748 ggttgtaaccatccaaacccacattaatggctctgaatcttttcggat 47013701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 10509354 - 10509203
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| | ||||| ||||||||| |||||| ||| | || ||||||||||||||||| ||||||  ||||||    
T  10509354 aggtgaagtgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaagaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 10509255  T
Q  107 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  10509254 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 10509203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 32529804 - 32529937
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||||| || ||||||  ||||||    
T  32529804 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagttaatgaaaacgtgttagt 32529903  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||||||||||||||    
T  32529904 ggttgtaaccgtccaaacccacattaatggctct 32529937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 36402843 - 36402692
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  36402843 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 36402744  T
Q  107 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  36402743 ggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggatt 36402692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 39586576 - 39586726
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    ||||||||| ||||||||||| ||||||||||||  ||||||| |||||||||  ||||||||  | || ||||||||||||||||| |||| |  ||||    
T  39586576 ataggtgaattgaagaatgaaagtatttgttgaaaatggaagcctatttatagcttaaaacaaatcctaggtcattaatacagtcaatgaaaccgtgtta 39586675  T
Q  105 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39586676 gtggttgtaaccatccaaacccacattaatggctctgaatctttccggatt 39586726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 6936472 - 6936605
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||| | |||||||||||||||||||| ||||||  ||||||    
T  6936472 aggtgaagtgaagaatgaatgtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaagtcattaatacagtcaatgaaaacgtgttagt 6936571  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||| ||||||||| ||||||||||||    
T  6936572 ggttgtaaccgcccaaacccatattaatggctct 6936605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 227634 - 227770
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  227634 aggtgaagtgaagaatgaaggtatttgttaaagatggaagtctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 227733  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaa 143  Q
    |||||||||||||||||||||||| ||||||||||||    
T  227734 ggttgtaaccgtccaaacccacatcaatggctctgaa 227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 40937222 - 40937366
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||  | || ||||||||||||||||| ||||||  ||||||    
T  40937222 aggtgaagtgaaaaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaaatcctaggtcattaatacagtcaatgaaaacgtgttagt 40937321  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 151  Q
    ||||||||||||||||||||||||||| | |||||||||||||||    
T  40937322 ggttgtaaccgtccaaacccacattaaagactctgaatctttccg 40937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 41193850 - 41193717
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| || |||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  41193850 aggtgaagtggagaatgaaggtatttgttgaagatggaagcatatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttagt 41193751  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||||||||||||||||||| |||||    
T  41193750 ggttgtaaccgtccaaacccacattaatagctct 41193717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 39353310 - 39353435
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    ||||||||||| |||| |||||||| ||||||| ||||||||| |||||||||  | || ||||||||||||||||| ||||||  ||||||||||||||    
T  39353310 tgaagaatgaatgtatctgttgaagatggaagcctatttatagcctaaaacaaatcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 39353409  T
Q  115 ccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||| ||||    
T  39353410 ccgtccaaacccacattaatgactct 39353435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 49166240 - 49166110
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| |||||||||||||||||||| |||| ||||||| ||||||||| |||||||||| | ||  |||||| ||||||||| ||||||| ||||||||    
T  49166240 gtgaagtgaagaatgaaggtatttgt-gaagatggaagcctatttatagcctaaaacaagtcctagatcattactacagtcaatgaaaacatgttagtgg 49166142  T
Q  109 ttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||| |||| ||||||||| ||||    
T  49166141 ttgtaaccgtcctaacctacattaatgactct 49166110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 31765335 - 31765207
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||||||| | || ||||||| | |||||||  |||||  ||||||    
T  31765335 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcattagtgcagtcaataaaaacgtgttagt 31765236  T
Q  107 ggttgtaaccgtccaaacccacattaatg 135  Q
    |||||||||||| |||||| |||||||||    
T  31765235 ggttgtaaccgttcaaacctacattaatg 31765207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 41174816 - 41174905
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaac 98  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||    
T  41174816 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaac 41174905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 41182006 - 41182051
Alignment:
Q  108 gttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  41182006 gttgtaaccatccaaacccacattaatggctctgaatctttccgga 41182051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 33843521 - 33843582
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    ||||||| ||||||||||||| ||||||||||| ||||| | ||||||||| ||||||||||    
T  33843521 aggtgaagtgaagaatgaaggaatttgttgaagatggaaacctatttatagcctaaaacaag 33843582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 42899222 - 42899283
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    ||||||| ||||||||||||| ||||||||||  || |||| ||||||||| ||||||||||    
T  42899222 aggtgaagtgaagaatgaaggaatttgttgaaaatgcaagcctatttatagcctaaaacaag 42899283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 51329061 - 51329000
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    ||||||| ||||||||||||| ||||||||||  || |||| ||||||||| ||||||||||    
T  51329061 aggtgaagtgaagaatgaaggaatttgttgaacatgcaagcctatttatagcctaaaacaag 51329000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 32530017 - 32530081
Alignment:
Q  170 ttccctcgttcacaattatcactttaatccgtaaaacaaaggtacatttcggattttattttccg 234  Q
    ||||||||||||| |||||| | |||||||| |||||| | || ||||||||||||||| |||||    
T  32530017 ttccctcgttcaccattatcgcattaatccggaaaacacatgtgcatttcggattttatattccg 32530081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 53393958 - 53394016
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagcctta 73  Q
    ||||||||||||| ||||||||||  || |||| ||||||||| |||||||||| ||||    
T  53393958 tgaagaatgaaggaatttgttgaacatgcaagcctatttatagcctaaaacaagtctta 53394016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 31765078 - 31765037
Alignment:
Q  202 aaaacaaaggtacatttcggattttattttccggaatgcatc 243  Q
    |||||||||||||||| |||||| ||||||||||| ||||||    
T  31765078 aaaacaaaggtacattccggattgtattttccggactgcatc 31765037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 25214666 - 25214606
Alignment:
Q  8 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    |||||| ||||||||||||| ||||||| ||| || |||  ||||||||| ||||||||||    
T  25214666 ggtgaattgaagaatgaaggaatttgttaaagatgtaagtctatttatagcctaaaacaag 25214606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 44760105 - 44760245
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    |||| ||||||||||| | |||||| ||||||||||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  44760105 tgaataatgaaggtatatcttgaagatggaagcttatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 44760204  T
Q  115 ccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44760205 ccgtccaaacccacattaatggctctgaatctttccggatt 44760245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 6404128 - 6404268
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||| ||||||||||||  ||||||||||||||    
T  6404128 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacggtcaacgaaaacgtgttagtggttgtaa 6404227  T
Q  115 ccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  6404228 ccgtccaaacccgcattaatggctctaaatctttcccgatt 6404268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 15911780 - 15911931
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||| |||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| |||||   ||||||    
T  15911780 aggtgaagtgaagaatcaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaatgtgttagt 15911879  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15911880 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 15911931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 13278698 - 13278831
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |  ||||||||||||||||| ||||||  ||||||    
T  13278698 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctttgtcattaatacagtcaatgaaaacgtgttagt 13278797  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||||||| |||||||||||||||||    
T  13278798 ggttgtaaccgtccaaccccacattaatggctct 13278831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 17308962 - 17309112
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||||||||||||||| |||| ||||||| ||||||||| | |||||||| | || ||||||||||||||||| ||||||  ||||||    
T  17308962 aggtgaagtgaagaatgaaggtatttgt-gaagatggaagcctatttatagccgaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 17309060  T
Q  107 ggttg---taaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  17309061 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 17309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 30490805 - 30490662
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg---ttg 111  Q
    ||||||||| ||||||||||||||| || |||| ||||||| | |||||||||| | || ||||||||||||||||| ||||||  ||||||||   |||    
T  30490805 tgaagaatgtaggtatttgttgaagatgaaagcctatttatggcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttg 30490706  T
Q  112 taaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  30490705 taaccgtccaaacccacattaatggctctgaatctttctggatt 30490662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 38703719 - 38703569
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||||||| |||||||||||||||| |||||||  |||||||| |||||| ||| | || ||||||||||||||||| ||||||  ||||||    
T  38703719 aggtgaagtgaagaataaaggtatttgttgaagatggaagcc-atttatagcctaaaagaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 38703621  T
Q  107 ggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||   ||||||||||||||||||||||| |||||||||||||||||||    
T  38703620 ggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggatt 38703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 17137842 - 17137689
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagc----ttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagt 102  Q
    ||||||| ||||||||||||||||||||||||| | |||||    |||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||    
T  17137842 aggtgaagtgaagaatgaaggtatttgttgaagatagaagcctgtttatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgt 17137743  T
Q  103 tagtggttgt---aaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
    ||||||||||   |||||||||||||||||||||||||||| ||| ||||||||    
T  17137742 tagtggttgttgtaaccgtccaaacccacattaatggctctaaatgtttccgga 17137689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 45117075 - 45117230
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagct-------tatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaaca 99  Q
    ||||||| ||||||||||| ||||||||||||| |||||| |       ||||||||| |||||||||| |||| |||||||||| |||||| ||||||     
T  45117075 aggtgaagtgaagaatgaaagtatttgttgaagatggaagatggaagcctatttatagcctaaaacaagtcttaggtcattaatagagtcaatgaaaacg 45117174  T
Q  100 agttagtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
     ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  45117175 tgttagtggttgtaaccgtccaaatccacattaacggctctgaatctttctggatt 45117230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 7942875 - 7942742
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||| |||||||||||||||||||| ||||||  | |||||||  ||||||||| | || ||| ||| ||||||||| ||||||| ||||||    
T  7942875 aggtgaagtgaacaatgaaggtatttgttgaagatggaagtctgtttatagcataaaacaagtcctaggtccttactacagtcaatgaaaacatgttagt 7942776  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||| ||||||||||||||    
T  7942775 ggttgtaaccgtccaaacctacattaatggctct 7942742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 31994210 - 31994077
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||| |||||||| |||||||||||  ||||| | ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  31994210 aggtgaagtgatgaatgaagatatttgttgaatatggaaacctatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttagt 31994111  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||| ||||||||||||||    
T  31994110 ggttgtaaccgtccaaacctacattaatggctct 31994077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 1210062 - 1209930
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||| |||||||||| |||| ||||||| |||||||||  ||||||||| | || |||||||||| |||||| ||||||  ||||||||    
T  1210062 gtgaagtgaagaatgcaggtatttgtcgaagatggaagcctatttatagcttaaaacaagtcctaggtcattaataaagtcaatgaaaacgtgttagtgg 1209963  T
Q  109 ttgtaaccgtccaaacccaca-ttaatggctct 140  Q
    ||||||||||||||||||||| |||||||||||    
T  1209962 ttgtaaccgtccaaacccacatttaatggctct 1209930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 18137596 - 18137722
Alignment:
Q  10 tgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggt 109  Q
    |||| ||||||||||||||||||||||||| |  |||| ||||||||| |||||| ||| | || ||||||| |||| |||| ||||||  |||||||||    
T  18137596 tgaagtgaagaatgaaggtatttgttgaagataaaagcctatttatagcctaaaataagtcctaggtcattagtacaatcaatgaaaacgtgttagtggt 18137695  T
Q  110 tgtaaccgtccaaacccacattaatgg 136  Q
    ||||||||||| |||| ||||||||||    
T  18137696 tgtaaccgtcccaacctacattaatgg 18137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 38207489 - 38207567
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatac 85  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || |||||||||||    
T  38207489 aggtgaagtgaagaatgaaggtatttgttgaagatgtaagcatatttatagcctaaaacaagtcctaggtcattaatac 38207567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 38208410 - 38208487
Alignment:
Q  81 aatacagtcaacgaaaacaagttagtggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||| ||||| ||||||  ||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||    
T  38208410 aatacggtcaatgaaaacgtgttagtggttgttgcaaccgtccaaacccacattaatggctctgaatctttccagatt 38208487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 1114722 - 1114803
Alignment:
Q  17 aagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaac 98  Q
    ||||||||||||||||||||||| || |||| |||||||||  ||||||||| | || ||||||| || |||||| ||||||    
T  1114722 aagaatgaaggtatttgttgaagatgaaagcctatttatagcttaaaacaagtcctaggtcattagtatagtcaatgaaaac 1114803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 7942614 - 7942576
Alignment:
Q  205 acaaaggtacatttcggattttattttccggaatgcatc 243  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  7942614 acaaaggtacattccggattttattttccggaatgcatc 7942576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 21485391 - 21485330
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    ||||||| ||||||||||| | ||||||||||  || |||||||||||||| ||||||||||    
T  21485391 aggtgaagtgaagaatgaaagaatttgttgaatatgaaagcttatttatagcctaaaacaag 21485330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 37128027 - 37127964
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    ||||||||| ||||||||||| | ||||||| ||  || |||||||||||||| ||||||||||    
T  37128027 ataggtgaagtgaagaatgaaagaatttgttaaaaatgcaagcttatttatagcctaaaacaag 37127964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 31993948 - 31993910
Alignment:
Q  205 acaaaggtacatttcggattttattttccggaatgcatc 243  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  31993948 acaaaggtacattccggattttattttccggaatacatc 31993910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 1115362 - 1115403
Alignment:
Q  202 aaaacaaaggtacatttcggattttattttccggaatgcatc 243  Q
    ||||||||||| |||| | |||||||||||||||||||||||    
T  1115362 aaaacaaaggtgcattccagattttattttccggaatgcatc 1115403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 1115204 - 1115236
Alignment:
Q  108 gttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||||||||| ||||||||||||||    
T  1115204 gttgtaaccgtccaaacctacattaatggctct 1115236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 33945933 - 33945993
Alignment:
Q  8 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 68  Q
    |||||| ||||||||||||| ||||||||||| || || | ||| ||||| ||||||||||    
T  33945933 ggtgaagtgaagaatgaaggaatttgttgaagatgcaaacctatatatagcctaaaacaag 33945993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 37952305 - 37952453
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  37952305 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctttttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 37952404  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  37952405 ggttgtaacggtccaaacccacattaatgactctgaatctttccggatt 37952453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 29961404 - 29961546
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||| ||| ||||||||||||||||| |||| ||||||  ||||||||    
T  29961404 gtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaataagtcttaagtcattaatacaatcaatgaaaacgtgttagtgg 29961503  T
Q  109 ttgtaaccgtccaaacccacattaatggctctgaatctttccg 151  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  29961504 ttgtaaccgttcaaacccacattaatggctctgaatctttccg 29961546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 44496488 - 44496638
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    ||||||| | ||||||||||| ||||||||||||| || |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||    
T  44496488 ataggtggagtgaagaatgaaagtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaacgtgtta 44496587  T
Q  105 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44496588 gtggttgtaaccgtccaaacccacattaatggctttgaatctttccggatt 44496638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 41086406 - 41086537
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||||||    
T  41086406 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtgg 41086505  T
Q  109 ttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||| |||||||||||||||||||||||    
T  41086506 ttgtaaccttccaaacccacattaatggctct 41086537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 41091174 - 41091305
Alignment:
Q  9 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 108  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||    
T  41091174 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtgg 41091273  T
Q  109 ttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||||||||||||    
T  41091274 ttgtaaccgtccaaacccacattaatggctct 41091305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 14587476 - 14587322
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagct---tatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtt 103  Q
    ||||||| ||||||||||||||||||||||||| |||||||    ||||||||| |||||||||| | |||||||||||||||||||| ||||||  |||    
T  14587476 aggtgaagtgaagaatgaaggtatttgttgaagatggaagccgcctatttatagcctaaaacaagtcctaagtcattaatacagtcaatgaaaacgtgtt 14587377  T
Q  104 agtggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||   |||||||||||||||||| ||||||||||||||||||||||||    
T  14587376 agtggttgttgtaaccgtccaaacccacataaatggctctgaatctttccggatt 14587322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 11952554 - 11952421
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||| |||  ||||||||||||||||| ||||||  ||||||    
T  11952554 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaataagtcttttgtcattaatacagtcaatgaaaacgtgttagt 11952455  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||||||||| |||||||||||||||    
T  11952454 ggttgtaaccgtccaaactcacattaatggctct 11952421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 42882715 - 42882578
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    |||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| |||||   ||||||||||||||    
T  42882715 tgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaatgtgttagtggttgtaa 42882616  T
Q  115 ccgtccaaacccacattaatggctctgaatctttccgg 152  Q
    || |||||||||||| ||||||||||||||||||||||    
T  42882615 ccatccaaacccacaataatggctctgaatctttccgg 42882578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 50262125 - 50261992
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  50262125 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 50262026  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||| |||||||||||||||| ||||    
T  50262025 ggttgtaaccgttcaaacccacattaatgactct 50261992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 41900413 - 41900288
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 114  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| |||||   ||||||||||||||    
T  41900413 tgaagaatgaaggtatttattgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaatgtgttagtggttgtaa 41900314  T
Q  115 ccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||||||||||    
T  41900313 ccgtccaaacccacattaatggctct 41900288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 49851713 - 49851846
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||| ||||||    
T  49851713 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattagtacagtcaatgaaaacatgttagt 49851812  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||||||| ||||| ||||||||    
T  49851813 ggttgtaaccgtccaaacctacattgatggctct 49851846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 33801368 - 33801519
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||| |||||||| |||||| ||||||| ||||||||| |||||||||| | |||||||||| ||||||||| ||||||  ||||||    
T  33801368 aggtgaagtgaagaatgtaggtattttttgaagatggaagcctatttatagcctaaaacaagtcctaagtcattattacagtcaatgaaaacgtgttagt 33801467  T
Q  107 ggt---tgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||   ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  33801468 ggttgctgtaatcgtccaaacccacattaatgactctgaatctttccagatt 33801519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 38860681 - 38860814
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | ||  ||||||||||| |||| ||||||  ||||||    
T  38860681 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcatagatcattaatacattcaatgaaaacgtgttagt 38860780  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||| ||||||||||||||||||||||||||||||    
T  38860781 ggtagtaaccgtccaaacccacattaatggctct 38860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 52632493 - 52632362
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||  ||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||| |||| ||||||  ||||||    
T  52632493 aggtgaagtgaagaatgaagacatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacaatcaatgaaaacgtgttagt 52632394  T
Q  107 ggttgtaaccgtccaaacccacattaatggct 138  Q
    ||||||||||||| ||||||||||||||||||    
T  52632393 ggttgtaaccgtctaaacccacattaatggct 52632362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 12528448 - 12528583
Alignment:
Q  5 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 104  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  |||     
T  12528448 ataggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttg 12528547  T
Q  105 gtggttgtaaccgtccaaacccacattaatggctct 140  Q
    ||||||||||||||| |||  || ||||||| ||||    
T  12528548 gtggttgtaaccgtcgaaattcatattaatgactct 12528583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 23984169 - 23984039
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||| | ||||||||| |||||||||| | || |||||   ||||||||| ||||||| ||||||    
T  23984169 aggtgaagtgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcctaggtcat---tacagtcaatgaaaacatgttagt 23984073  T
Q  107 ggttgtaaccgtccaaacccacattaatggctct 140  Q
    |||||||||||||||||||| |||||||| ||||    
T  23984072 ggttgtaaccgtccaaaccctcattaatgactct 23984039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 12700664 - 12700521
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta---gtggttg 111  Q
    |||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| | ||  |||||||||||||||| |||||   ||||   |||||||    
T  12700664 tgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctagatcattaatacagtcaatgaaaatgtgttagtggtggttg 12700565  T
Q  112 taaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||    
T  12700564 taactgtccaaacgcacattaatggctctgaatctttccagatt 12700521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 3517708 - 3517560
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| |  |||  ||||||||| |||||||||  | || |||||||   ||||||| ||||||  ||||||    
T  3517708 aggtgaagtgaagaatgaaggtatttgttgaagataaaagtctatttatagcctaaaacaactcctaggtcatta---cagtcaatgaaaacgtgttagt 3517612  T
Q  107 ggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  3517611 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 3517560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 41723533 - 41723676
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| || | |||||||||| |||||| ||||||  ||| ||    
T  41723533 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtct-aggtcattaatatagtcaatgaaaacgtgttggt 41723631  T
Q  107 ggttgta---accgtccaaacccacattaatggctctgaatcttt 148  Q
    ||||||    | |||||||||||||||||||||||||||||||||    
T  41723632 ggttgttgttatcgtccaaacccacattaatggctctgaatcttt 41723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 27216803 - 27216931
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||| |||||| |||||| || |||| ||||||||| |||||||||| | || ||||||| |||| |||| ||||||  ||||||    
T  27216803 aggtgaagtgaagaatgaaagtattttttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattagtacaatcaatgaaaacgtgttagt 27216902  T
Q  107 ggttgtaaccgtccaaacccacattaatg 135  Q
    ||||||||||||||||||  |||||||||    
T  27216903 ggttgtaaccgtccaaacatacattaatg 27216931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 44757664 - 44757581
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtca 90  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||    
T  44757664 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtca 44757581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 22858800 - 22858851
Alignment:
Q  104 agtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22858800 agtggttgtaaccgtcaaaacccacattaatggctctgaatctttccggatt 22858851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 48964986 - 48964913
Alignment:
Q  82 atacagtcaacgaaaacaagttagtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||||| ||||||  ||||||| || |||||||||||||||||||||||| |||||||||||| ||||||    
T  48964986 atacagtcaatgaaaacgtgttagtgattctaaccgtccaaacccacattaatgactctgaatcttttcggatt 48964913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 49851967 - 49852013
Alignment:
Q  197 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatc 243  Q
    |||| ||||||||||||||||  |||||||||||| |||||||||||    
T  49851967 tccgaaaaacaaaggtacattctggattttattttgcggaatgcatc 49852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 243
Target Start/End: Complemental strand, 42882470 - 42882441
Alignment:
Q  214 catttcggattttattttccggaatgcatc 243  Q
    ||||||||||||||||||||||||||||||    
T  42882470 catttcggattttattttccggaatgcatc 42882441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 48965025 - 48964984
Alignment:
Q  15 tgaagaatgaaggtatttgttgaagttggaagcttatttata 56  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  48965025 tgaagaatgaacgtatttgttgaagatggaagcctatttata 48964984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 9305086 - 9304938
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||| ||||||||||||||||| ||| |  |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  9305086 aggtgaagtgatgaatgaaggtatttgtttaaggtaaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 9304987  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9304986 ggttgtaaccgtcaaaacccacaataatggctctgaatctttccggatt 9304938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 31271354 - 31271502
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| |||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||||| || ||||||  || |||    
T  31271354 aggtgaagtgaaaaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagttaatgaaaacgtgtaagt 31271453  T
Q  107 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  31271454 ggttgtaatcgtccaaacccacattaatggctctgaatctttcgggatt 31271502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 31318539 - 31318671
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  31318539 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttagt 31318638  T
Q  107 ggttgtaaccgtccaaacccacattaatggctc 139  Q
    |||||||||||||||||||||||||||||||||    
T  31318639 ggttgtaaccgtccaaacccacattaatggctc 31318671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 31723001 - 31722855
Alignment:
Q  10 tgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg- 108  Q
    |||| |||||||||||||| |||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||     
T  31723001 tgaagtgaagaatgaaggtctttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggt 31722902  T
Q  109 --ttgtaaccgtccaaacccacattaatggctctgaatctttccgga 153  Q
      |||||||| ||||||||||||||||||||||||||||||||||||    
T  31722901 tgttgtaaccatccaaacccacattaatggctctgaatctttccgga 31722855  T

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Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 439036 - 439187
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||||||| | || ||||||| || |||||||||||||  ||||||    
T  439036 aggtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaacaagtcctaggtcattagtatagtcaacgaaaacgtgttagt 439135  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   |||||||||||||||||||||||||||| || ||||||||| ||||||    
T  439136 ggttgttgtaaccgtccaaacccacattaatgactttgaatcttttcggatt 439187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 16395320 - 16395471
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||| ||||||||||| | ||||||| ||||||||| |||||||||| | || |||||||||| |||||| ||||||  ||||||    
T  16395320 aggtgaagtgaagaatgaaagtatttgttgacgatggaagcctatttatagcctaaaacaagtcctatgtcattaatatagtcaatgaaaacgtgttagt 16395419  T
Q  107 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 155  Q
    |   ||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  16395420 ggttgttgtaaccatccaaacccacattaatggctttgaatatttccggatt 16395471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 303759 - 303904
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| ||||||||||||||||||||||||  ||||||| ||||||||| |||||||||| | || |||||||||||| |||| ||||||  ||| ||    
T  303759 aggtgaagtgaagaatgaaggtatttgttgaaaatggaagcctatttatagcctaaaacaagtcctaggtcattaatacaatcaatgaaaacgtgttggt 303858  T
Q  107 ggttg---taaccgtccaaacccacattaatggctctgaatctttc 149  Q
    |||||   |||||||||||||  ||||||||| |||||||| ||||    
T  303859 ggttgttataaccgtccaaacttacattaatgactctgaatgtttc 303904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 20818537 - 20818653
Alignment:
Q  7 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 106  Q
    ||||||| | ||||||||||| ||||||||||| ||||||  |||||||||||||||| ||| | || ||||| | |||| |||| ||||||  ||| ||    
T  20818537 aggtgaagtaaagaatgaaggaatttgttgaagatggaagtatatttatagtctaaaataagtcatacgtcataagtacaatcaatgaaaacgtgtttgt 20818636  T
Q  107 ggttgtaaccgtccaaa 123  Q
    |||  ||||||||||||    
T  20818637 ggtgctaaccgtccaaa 20818653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 19152 - 19071
Alignment:
Q  10 tgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaa 91  Q
    |||| ||||||||||||| ||||||||||| ||  ||| ||||||||| |||||||||| |||| ||||| | |||||||||    
T  19152 tgaagtgaagaatgaaggaatttgttgaagatgagagcctatttatagcctaaaacaagtcttaggtcataagtacagtcaa 19071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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