View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2858_low_35 (Length: 232)
Name: NF2858_low_35
Description: NF2858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2858_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31869971 - 31870180
Alignment:
| Q |
1 |
gtttcaacatcaagcaaa-ctatacaaagccaatataaactaaaccgtgcacaattttgttttgttgttaagttacttttcagcacaaatcaatttactt |
99 |
Q |
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| T |
31869971 |
gtttcaacatcaagcaaaactatacaaagccaatataaactaaaccgtgcacaatttt-----gttgttaagttacttttcaacacaaatcaatttactt |
31870065 |
T |
|
| Q |
100 |
caaactccttttaactaaaatcaaaattaactaaaacaaaaaccaagattaagcagggtcacctttgaatcctctttaaggtttgtggattaatctcagc |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31870066 |
caaactccttttaactaaaatcaaaattaactaaaacaaaaaccaagattaagcagggtcacctttgaatcctctttaaggtttgtggattaatctcagc |
31870165 |
T |
|
| Q |
200 |
ctgtgtaggaggacc |
214 |
Q |
| |
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||||||||||||||| |
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| T |
31870166 |
ctgtgtaggaggacc |
31870180 |
T |
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