View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2858_low_8 (Length: 406)
Name: NF2858_low_8
Description: NF2858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2858_low_8 |
 |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 73 - 349
Target Start/End: Complemental strand, 37183428 - 37183152
Alignment:
| Q |
73 |
gagagaaaggaggggagagtttggaaaaaagaacgagcaagtagaagaaacagaagatattagaagaggatgattttaagaagttcatttttcttcataa |
172 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
37183428 |
gagagaaaggaggggagagtttggaaaaaagaacgagcaagtagaagaaacataagatattagaagaggatgattttaataagttcattttttttcataa |
37183329 |
T |
 |
| Q |
173 |
tacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaatattatttataaatattaaatta |
272 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37183328 |
tacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgagggtttatatgaattcttcaatattatttataaatattaaatta |
37183229 |
T |
 |
| Q |
273 |
tcattctcttaaaaataatctttcatacaatataaaagattccccattccctttattttccactcccaaaaccttta |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
37183228 |
tcattctcttaaaaataatctttcatacaatataaaagattatccgttccctttattttccactcccaaaatcttta |
37183152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 3737325 - 3737235
Alignment:
| Q |
159 |
atttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| ||| |||||||||||||||| || || | |||| ||| |||| || |||||||||| |
|
|
| T |
3737325 |
atttttcttcataatacaaaatcatcctcatttgaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa |
3737235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 5322223 - 5322128
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaagg-actcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||| || ||||||||| ||||||||| || |||| |||| |||||||||||| ||||| |
|
|
| T |
5322223 |
gttcatttttcttcataatacaaaatcctcctcatttgggggaactcaaaaactgtattggaaaagggttttggagggtttatatgaattattcaa |
5322128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 187
Target Start/End: Complemental strand, 8184260 - 8184230
Alignment:
| Q |
157 |
tcatttttcttcataatacaaaatttttctc |
187 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
8184260 |
tcatttttcttcataatacaaaatttttctc |
8184230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 36567457 - 36567399
Alignment:
| Q |
81 |
ggaggggagagttt-ggaaaaaagaacgagcaagtagaagaaacagaagatattagaag |
138 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| ||||||| |||||| ||| |||| |
|
|
| T |
36567457 |
ggaggggagagttttggaaaaaagaaggagcaagtggaagaaatagaagacattggaag |
36567399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 17416820 - 17416757
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaa |
218 |
Q |
| |
|
||||| |||||||||||||||||||| ||| ||||||| | |||||||||||||||||||||| |
|
|
| T |
17416820 |
gttcaattttcttcataatacaaaatctttttcattttgggaactcaaaaattgtattggagaa |
17416757 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 50476520 - 50476604
Alignment:
| Q |
160 |
tttttcttcataatacaaaatttttctcattttaagga-ctcaaaaattgtattggagaaaatttttcgaggatttatatgaatt |
243 |
Q |
| |
|
||||| ||||||||||||||| ||||||| | ||| ||||||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
50476520 |
tttttattcataatacaaaatccccctcatttgagggaactcaaaaattgtattggaggagggttttcgagggtttatatgaatt |
50476604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 43438397 - 43438306
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgaggatttatatgaattctt |
246 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| ||||| | | |||||||||||||||| ||| | | |||| ||| ||||||||| ||||| |
|
|
| T |
43438397 |
gttcatttttctttataatacaaaattcttcccatttgaggaactcaaaaattgtattagagcataattttggagagtttatatgagttctt |
43438306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 22330673 - 22330731
Alignment:
| Q |
160 |
tttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaa |
218 |
Q |
| |
|
|||||||||||||||||||||| | ||| ||||| | ||| |||||||||||||||||| |
|
|
| T |
22330673 |
tttttcttcataatacaaaattctcctctttttaggaactaaaaaattgtattggagaa |
22330731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 37388251 - 37388311
Alignment:
| Q |
156 |
ttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggag |
216 |
Q |
| |
|
|||||||||||| |||||| ||||| ||| |||||| |||||||||||||||||||||| |
|
|
| T |
37388251 |
ttcatttttctttataataaaaaatctttttcatttgggggactcaaaaattgtattggag |
37388311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 192
Target Start/End: Original strand, 42651628 - 42651661
Alignment:
| Q |
159 |
atttttcttcataatacaaaatttttctcatttt |
192 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
42651628 |
atttttcttcataatacaaaattttcctcatttt |
42651661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 3393961 - 3394021
Alignment:
| Q |
156 |
ttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggag |
216 |
Q |
| |
|
|||||||||||| |||||||||||| | ||||||| || ||||||||||| |||||||| |
|
|
| T |
3393961 |
ttcatttttctttataatacaaaatcctcctcatttagagaactcaaaaattatattggag |
3394021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 49855912 - 49855853
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaagg-actcaaaaattgtattg |
213 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| |
|
|
| T |
49855912 |
gttcatttttcttcataatacaaaataattctcatttagaggaactcaaaaattgtattg |
49855853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 1133029 - 1132937
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaagga-ctcaaaaattgtattggagaaaatttttcgaggatttatatgaattctt |
246 |
Q |
| |
|
||||||||| ||||||||||||||| | | |||||||| ||| ||||||||||||||||||| | |||| |||| |||| |||||||||| |
|
|
| T |
1133029 |
gttcattttacttcataatacaaaactctcctcattttggggaactcaaaaattgtattggaggagggttttggagggtttacatgaattctt |
1132937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 15499403 - 15499341
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattt-taaggactcaaaaattgtattggag |
216 |
Q |
| |
|
||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||||| |
|
|
| T |
15499403 |
gttcacttttcttcataatacaaaatcttcctcatttgggagaactcaaaaattgtattggag |
15499341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 24588386 - 24588292
Alignment:
| Q |
156 |
ttcatttttcttcataatacaaaatttttctcattttaagg-actcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| | | |||| |||| |||| ||||||||||||| |
|
|
| T |
24588386 |
ttcatttttcttcataatacaaaatccccctcatttggaggaactcaaaaattgtattgggggatggttttggagggtttaaatgaattcttcaa |
24588292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 7302064 - 7302120
Alignment:
| Q |
156 |
ttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattg |
213 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| ||| || ||||||||||||||||| |
|
|
| T |
7302064 |
ttcatttttcttcatagtacaaaatccttctca-tttgagaactcaaaaattgtattg |
7302120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 13638400 - 13638461
Alignment:
| Q |
156 |
ttcatttttcttcataatacaaaatttttctcattttaagg-actcaaaaattgtattggag |
216 |
Q |
| |
|
|||||||||||| ||||||||||||| | |||||||| || ||||||||||||| |||||| |
|
|
| T |
13638400 |
ttcatttttcttgataatacaaaattatcctcatttttgggaactcaaaaattgtgttggag |
13638461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 50535159 - 50535110
Alignment:
| Q |
201 |
aaaaattgtattggagaaa-atttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
50535159 |
aaaaattgtattggagaaggatttttggagggtttatatgaattcttcaa |
50535110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 24924683 - 24924589
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| | | ||| ||||||||||| ||| ||| |||| || | |||||||||||||||||| |
|
|
| T |
24924683 |
gttcatttttcttcataatacaaaaccctcctcatttgaggaacttgaaaattgtatttgaggaaagttttggatggtttatatgaattcttcaa |
24924589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 38233762 - 38233728
Alignment:
| Q |
222 |
ttttcgaggatttatatgaattcttcaatattatt |
256 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
38233762 |
ttttcgaggatttatatgaattcttcaattttatt |
38233728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 42267111 - 42267049
Alignment:
| Q |
154 |
agttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggag |
216 |
Q |
| |
|
|||| ||||||||||||||||||||| | || |||||| || | |||||||||||||||||| |
|
|
| T |
42267111 |
agttaatttttcttcataatacaaaactcttatcatttggagaattcaaaaattgtattggag |
42267049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 32429991 - 32429940
Alignment:
| Q |
197 |
actcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
||||||||| ||||||||||| | ||||| |||| |||||||||||||||||| |
|
|
| T |
32429991 |
actcaaaaaatgtattggagagagttttt-gagggtttatatgaattcttcaa |
32429940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 6491161 - 6491223
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaagg-actcaaaaattgtattggag |
216 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||| |
|
|
| T |
6491161 |
gttcatttttcttcataatacaaaatcttcctcatttgggggaactcaaaaattgtattggag |
6491223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 9096296 - 9096391
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaagga-ctcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
||||| |||||||||||||||||||| || || |||| ||| ||||| ||||||||||||| | |||| |||| |||||||||||||||||| |
|
|
| T |
9096296 |
gttcacttttcttcataatacaaaatcttcctaatttgggggaactcaacaattgtattggaggaggattttggagggtttatatgaattcttcaa |
9096391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 19389921 - 19389827
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
|||||||| ||||||||||||||||| | ||||||| | ||| |||||||||||||||| | |||| |||| |||| ||||||||||||| |
|
|
| T |
19389921 |
gttcatttatcttcataatacaaaatcctcctcatttggggaactaaaaaattgtattggaggaggattttggagggtttacatgaattcttcaa |
19389827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 5836864 - 5836901
Alignment:
| Q |
154 |
agttcatttttcttcataatacaaaatttttctcattt |
191 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
5836864 |
agttcatttttcttcataatacaaaactcttctcattt |
5836901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 6491427 - 6491390
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcatttt |
192 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||| |
|
|
| T |
6491427 |
gttcatttttcttcataatacaaaatcttcctcatttt |
6491390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 18671017 - 18671073
Alignment:
| Q |
162 |
tttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaa |
218 |
Q |
| |
|
|||||||||||||| |||| ||| |||||| | | ||| |||||||||||||||||| |
|
|
| T |
18671017 |
tttcttcataatactaaatctttttcatttgaggaactaaaaaattgtattggagaa |
18671073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 42777387 - 42777299
Alignment:
| Q |
160 |
tttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
||||| ||||||||||||||| || |||||||| |||||||||||||||||||| || |||| ||| |||| ||||||||||||| |
|
|
| T |
42777387 |
ttttttttcataatacaaaatcttcatcattttagaaactcaaaaattgtattggaggaagttttgaaagg-tttacatgaattcttcaa |
42777299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 53013583 - 53013619
Alignment:
| Q |
155 |
gttcatttttcttcataatacaaaatttttctcattt |
191 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| |
|
|
| T |
53013583 |
gttcatttttcttcataatacaaaatcttcctcattt |
53013619 |
T |
 |
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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 69038 - 68947
Alignment:
| Q |
159 |
atttttcttcataatacaaaatttttctcattttaaggactcaaaaattgtattgga-gaaaatttttcgaggatttatatgaattcttcaat |
250 |
Q |
| |
|
||||||||| |||||||||||| |||| |||||| | || ||||||||||||| || || | ||||| |||| |||| |||||||||||||| |
|
|
| T |
69038 |
atttttctttataatacaaaatctttcaaattttaggaacacaaaaattgtattagaggagagtttttggagg-tttacatgaattcttcaat |
68947 |
T |
 |
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Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 8439353 - 8439289
Alignment:
| Q |
249 |
atattatttataaatattaaattatcattctcttaaaaataatctttcatacaatataaaagatt |
313 |
Q |
| |
|
|||||| | ||||| ||||| |||||||||||| ||||||| | ||||| | ||||||||||||| |
|
|
| T |
8439353 |
atattaatcataaacattaatttatcattctctaaaaaatactttttcaaaaaatataaaagatt |
8439289 |
T |
 |
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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 26713883 - 26713935
Alignment:
| Q |
197 |
actcaaaaattgtattggagaaaatttttcgaggatttatatgaattcttcaa |
249 |
Q |
| |
|
|||||||||||||||||||| | |||| |||| |||||||||||||||||| |
|
|
| T |
26713883 |
actcaaaaattgtattggaggagggttttggagggtttatatgaattcttcaa |
26713935 |
T |
 |
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