View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2859-Insertion-16 (Length: 357)

Name: NF2859-Insertion-16
Description: NF2859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2859-Insertion-16
NF2859-Insertion-16
[»] chr7 (51 HSPs)
chr7 (8-338)||(25333159-25333498)
chr7 (280-345)||(7175977-7176042)
chr7 (280-345)||(7275298-7275363)
chr7 (280-345)||(7799947-7800012)
chr7 (280-345)||(22119909-22119974)
chr7 (280-345)||(40543025-40543090)
chr7 (280-345)||(2103076-2103141)
chr7 (280-345)||(2751292-2751357)
chr7 (280-345)||(10091209-10091274)
chr7 (280-345)||(11997870-11997935)
chr7 (280-345)||(21217948-21218013)
chr7 (280-345)||(21835172-21835237)
chr7 (280-345)||(22299870-22299935)
chr7 (280-345)||(22703507-22703572)
chr7 (280-345)||(17197065-17197130)
chr7 (280-345)||(17212074-17212139)
chr7 (280-345)||(18044128-18044193)
chr7 (280-331)||(23854417-23854468)
chr7 (280-346)||(31713009-31713075)
chr7 (280-345)||(2344320-2344385)
chr7 (280-345)||(13332538-13332603)
chr7 (280-345)||(19421252-19421317)
chr7 (280-345)||(27009380-27009445)
chr7 (280-345)||(27312173-27312238)
chr7 (280-345)||(42913628-42913693)
chr7 (280-345)||(14199781-14199846)
chr7 (280-345)||(23012623-23012688)
chr7 (280-345)||(28089837-28089902)
chr7 (280-332)||(21370618-21370670)
chr7 (287-338)||(31273942-31273993)
chr7 (299-345)||(16374034-16374080)
chr7 (287-345)||(39145767-39145825)
chr7 (287-345)||(42814892-42814950)
chr7 (279-340)||(22264622-22264683)
chr7 (280-345)||(22696341-22696406)
chr7 (280-345)||(27704023-27704088)
chr7 (287-332)||(32849619-32849664)
chr7 (301-345)||(654819-654863)
chr7 (280-331)||(31197612-31197663)
chr7 (281-331)||(37473639-37473690)
chr7 (287-345)||(28646997-28647055)
chr7 (299-345)||(28950911-28950957)
chr7 (299-345)||(29861711-29861756)
chr7 (280-325)||(28003857-28003902)
chr7 (292-345)||(40332132-40332185)
chr7 (280-332)||(43785427-43785479)
chr7 (291-330)||(36772432-36772471)
chr7 (295-345)||(9718102-9718152)
chr7 (291-341)||(22638324-22638374)
chr7 (281-330)||(37693692-37693741)
chr7 (280-332)||(21574231-21574283)
[»] chr8 (39 HSPs)
chr8 (269-345)||(14632964-14633040)
chr8 (280-345)||(15259521-15259586)
chr8 (280-345)||(28193495-28193560)
chr8 (280-345)||(34237770-34237835)
chr8 (280-345)||(39349277-39349342)
chr8 (269-345)||(20469927-20470003)
chr8 (280-345)||(3734738-3734803)
chr8 (280-345)||(4698838-4698903)
chr8 (280-345)||(4718666-4718731)
chr8 (280-345)||(19471630-19471695)
chr8 (280-345)||(19542554-19542619)
chr8 (280-345)||(19590077-19590142)
chr8 (280-345)||(27746450-27746515)
chr8 (280-345)||(2618207-2618272)
chr8 (280-345)||(21603251-21603316)
chr8 (280-332)||(18532128-18532180)
chr8 (287-345)||(32879307-32879365)
chr8 (287-345)||(42643233-42643291)
chr8 (280-345)||(264514-264579)
chr8 (280-345)||(651342-651407)
chr8 (280-345)||(837077-837142)
chr8 (280-345)||(20305929-20305994)
chr8 (280-345)||(21092562-21092627)
chr8 (281-332)||(2166721-2166772)
chr8 (282-345)||(8765641-8765704)
chr8 (287-345)||(7558058-7558116)
chr8 (280-345)||(42328026-42328090)
chr8 (282-329)||(8042677-8042724)
chr8 (287-330)||(24018410-24018453)
chr8 (287-345)||(28088314-28088372)
chr8 (271-345)||(34610802-34610876)
chr8 (291-345)||(34694691-34694745)
chr8 (280-345)||(22200675-22200740)
chr8 (280-345)||(28964054-28964119)
chr8 (287-345)||(26168963-26169021)
chr8 (276-345)||(3403617-3403686)
chr8 (280-345)||(3794812-3794877)
chr8 (280-317)||(9047421-9047458)
chr8 (280-345)||(34639322-34639386)
[»] chr2 (44 HSPs)
chr2 (269-345)||(43374440-43374516)
chr2 (280-345)||(10582105-10582170)
chr2 (280-345)||(17324783-17324848)
chr2 (280-345)||(41314009-41314074)
chr2 (269-345)||(36242427-36242503)
chr2 (272-345)||(5394026-5394099)
chr2 (280-345)||(33827688-33827753)
chr2 (280-345)||(44946168-44946233)
chr2 (280-345)||(44976269-44976334)
chr2 (269-345)||(45271390-45271466)
chr2 (287-345)||(25293190-25293248)
chr2 (280-345)||(11941325-11941390)
chr2 (280-345)||(27290605-27290670)
chr2 (267-345)||(1191518-1191595)
chr2 (280-337)||(18976548-18976605)
chr2 (289-345)||(15037985-15038041)
chr2 (280-331)||(34516537-34516588)
chr2 (287-341)||(4852582-4852636)
chr2 (287-345)||(32845115-32845173)
chr2 (280-345)||(8192466-8192531)
chr2 (280-337)||(8258914-8258971)
chr2 (272-345)||(13266499-13266572)
chr2 (280-345)||(30466945-30467010)
chr2 (280-345)||(41329860-41329925)
chr2 (281-345)||(4567552-4567616)
chr2 (280-332)||(6714409-6714461)
chr2 (294-338)||(35171831-35171875)
chr2 (280-345)||(36390683-36390746)
chr2 (280-341)||(24196021-24196082)
chr2 (280-332)||(19849850-19849902)
chr2 (282-340)||(19054044-19054102)
chr2 (287-332)||(40997478-40997523)
chr2 (280-329)||(44610091-44610140)
chr2 (280-332)||(32526213-32526265)
chr2 (282-345)||(28194248-28194311)
chr2 (267-310)||(29698151-29698194)
chr2 (271-345)||(19525511-19525585)
chr2 (282-324)||(29361573-29361615)
chr2 (280-345)||(23787123-23787188)
chr2 (309-345)||(2140598-2140634)
chr2 (279-331)||(6099519-6099571)
chr2 (280-332)||(19605973-19606025)
chr2 (280-340)||(27269470-27269530)
chr2 (272-332)||(38341746-38341806)
[»] chr4 (41 HSPs)
chr4 (266-345)||(7392078-7392157)
chr4 (280-345)||(27528910-27528975)
chr4 (280-345)||(49287875-49287940)
chr4 (280-345)||(25852231-25852296)
chr4 (280-345)||(32986214-32986279)
chr4 (280-345)||(33696394-33696459)
chr4 (280-345)||(33992643-33992708)
chr4 (280-345)||(52983636-52983701)
chr4 (287-345)||(51535637-51535695)
chr4 (280-341)||(1985853-1985914)
chr4 (280-345)||(2351030-2351095)
chr4 (280-345)||(22625185-22625250)
chr4 (280-345)||(40058967-40059032)
chr4 (281-345)||(20078099-20078163)
chr4 (280-332)||(35229185-35229237)
chr4 (268-345)||(12500173-12500253)
chr4 (287-345)||(13873410-13873468)
chr4 (280-345)||(20566366-20566432)
chr4 (291-345)||(34844873-34844927)
chr4 (280-330)||(46714409-46714459)
chr4 (280-345)||(54127457-54127522)
chr4 (280-331)||(19660661-19660712)
chr4 (280-331)||(43719194-43719245)
chr4 (271-345)||(30879280-30879354)
chr4 (280-345)||(5609317-5609382)
chr4 (280-345)||(35674856-35674921)
chr4 (280-345)||(45787819-45787883)
chr4 (281-345)||(20527148-20527212)
chr4 (275-310)||(39288878-39288913)
chr4 (282-341)||(44343533-44343592)
chr4 (280-319)||(55961883-55961922)
chr4 (282-331)||(30938219-30938269)
chr4 (287-345)||(36131625-36131683)
chr4 (280-345)||(32942387-32942452)
chr4 (280-345)||(34835546-34835611)
chr4 (280-332)||(12710196-12710248)
chr4 (282-345)||(38869794-38869858)
chr4 (280-315)||(34722187-34722222)
chr4 (295-345)||(13584369-13584419)
chr4 (280-345)||(41621711-41621776)
chr4 (287-332)||(42245770-42245815)
[»] chr5 (43 HSPs)
chr5 (280-345)||(13038569-13038634)
chr5 (268-345)||(19456325-19456401)
chr5 (280-345)||(11926617-11926682)
chr5 (269-345)||(12398563-12398639)
chr5 (282-345)||(18207226-18207289)
chr5 (287-345)||(38684232-38684290)
chr5 (280-345)||(8484776-8484841)
chr5 (280-345)||(13108564-13108629)
chr5 (280-345)||(15641220-15641285)
chr5 (280-345)||(25586949-25587014)
chr5 (280-345)||(32059555-32059620)
chr5 (280-345)||(33709616-33709681)
chr5 (280-345)||(37495064-37495129)
chr5 (280-345)||(38631076-38631141)
chr5 (266-338)||(7151332-7151404)
chr5 (287-345)||(34310166-34310224)
chr5 (280-337)||(22392718-22392775)
chr5 (280-345)||(27498846-27498911)
chr5 (281-332)||(34049840-34049891)
chr5 (280-330)||(15971252-15971302)
chr5 (280-337)||(1827653-1827710)
chr5 (280-345)||(4603794-4603859)
chr5 (280-345)||(30485845-30485910)
chr5 (280-345)||(31288061-31288126)
chr5 (287-339)||(36954842-36954894)
chr5 (282-345)||(6014395-6014458)
chr5 (291-345)||(10869680-10869734)
chr5 (280-345)||(7085741-7085806)
chr5 (272-345)||(17015528-17015601)
chr5 (287-345)||(15931083-15931141)
chr5 (287-345)||(42193509-42193567)
chr5 (292-345)||(11465022-11465075)
chr5 (287-345)||(25750724-25750784)
chr5 (280-345)||(27487670-27487735)
chr5 (287-330)||(5067325-5067368)
chr5 (280-314)||(3715055-3715089)
chr5 (287-345)||(19145526-19145584)
chr5 (280-330)||(23270652-23270702)
chr5 (280-345)||(37397730-37397795)
chr5 (280-345)||(12317265-12317330)
chr5 (279-332)||(15485419-15485472)
chr5 (281-330)||(16616137-16616186)
chr5 (280-345)||(26009379-26009444)
[»] chr6 (29 HSPs)
chr6 (280-345)||(9238992-9239057)
chr6 (287-345)||(654261-654319)
chr6 (280-345)||(11448888-11448953)
chr6 (280-345)||(14212909-14212974)
chr6 (280-345)||(15360213-15360278)
chr6 (280-345)||(22576084-22576149)
chr6 (288-345)||(1344960-1345017)
chr6 (280-345)||(12591654-12591719)
chr6 (280-345)||(34147363-34147428)
chr6 (280-345)||(34159979-34160044)
chr6 (269-345)||(17706422-17706498)
chr6 (272-331)||(28968171-28968230)
chr6 (280-345)||(3222750-3222814)
chr6 (280-345)||(13753257-13753322)
chr6 (280-331)||(11007182-11007233)
chr6 (280-345)||(5360186-5360251)
chr6 (280-345)||(9208269-9208334)
chr6 (280-345)||(9843955-9844020)
chr6 (280-345)||(11840918-11840983)
chr6 (280-341)||(17149575-17149636)
chr6 (280-345)||(21982435-21982500)
chr6 (280-341)||(33718577-33718638)
chr6 (303-345)||(12390465-12390507)
chr6 (291-345)||(28672095-28672149)
chr6 (280-345)||(17081169-17081234)
chr6 (280-345)||(21148625-21148690)
chr6 (280-330)||(9690768-9690818)
chr6 (280-345)||(33499491-33499557)
chr6 (288-340)||(28741961-28742013)
[»] chr3 (51 HSPs)
chr3 (280-345)||(26108309-26108374)
chr3 (280-345)||(30807268-30807333)
chr3 (280-345)||(35492928-35492993)
chr3 (280-345)||(40940842-40940907)
chr3 (280-345)||(46576365-46576430)
chr3 (269-345)||(10083934-10084010)
chr3 (269-345)||(10190857-10190933)
chr3 (287-345)||(52821750-52821808)
chr3 (280-345)||(8456265-8456330)
chr3 (280-345)||(25289829-25289894)
chr3 (280-345)||(25379778-25379843)
chr3 (280-345)||(26174130-26174195)
chr3 (280-345)||(45529869-45529934)
chr3 (280-345)||(52455764-52455829)
chr3 (280-345)||(53424291-53424356)
chr3 (287-345)||(21362967-21363025)
chr3 (287-345)||(48977412-48977470)
chr3 (280-345)||(15566614-15566679)
chr3 (280-345)||(30257641-30257706)
chr3 (280-345)||(34492690-34492755)
chr3 (280-345)||(49258377-49258442)
chr3 (280-345)||(53234025-53234090)
chr3 (287-343)||(29915386-29915442)
chr3 (287-343)||(29964539-29964595)
chr3 (281-345)||(45272531-45272595)
chr3 (287-345)||(7485640-7485698)
chr3 (287-345)||(39041967-39042025)
chr3 (280-345)||(9853633-9853698)
chr3 (280-345)||(31537953-31538018)
chr3 (280-345)||(40133564-40133629)
chr3 (280-345)||(53288827-53288892)
chr3 (291-345)||(18177002-18177056)
chr3 (280-345)||(55287820-55287885)
chr3 (292-332)||(1692863-1692903)
chr3 (290-345)||(19857078-19857133)
chr3 (291-345)||(7470330-7470384)
chr3 (280-330)||(14343418-14343468)
chr3 (280-345)||(9842938-9843002)
chr3 (280-345)||(50583009-50583074)
chr3 (287-345)||(25344172-25344230)
chr3 (268-345)||(8958151-8958228)
chr3 (280-345)||(49167073-49167138)
chr3 (287-331)||(38732990-38733034)
chr3 (290-345)||(25017542-25017597)
chr3 (280-331)||(36660787-36660838)
chr3 (287-345)||(32151448-32151506)
chr3 (281-331)||(51532807-51532857)
chr3 (308-345)||(2511412-2511449)
chr3 (280-345)||(4252511-4252576)
chr3 (280-345)||(11390619-11390684)
chr3 (284-345)||(33398583-33398644)
[»] chr1 (43 HSPs)
chr1 (280-345)||(4621352-4621417)
chr1 (280-345)||(24674410-24674475)
chr1 (272-345)||(45859158-45859231)
chr1 (280-345)||(46113517-46113582)
chr1 (272-339)||(33905631-33905698)
chr1 (280-345)||(7197361-7197426)
chr1 (280-345)||(8077664-8077729)
chr1 (280-345)||(24122040-24122105)
chr1 (285-345)||(36156003-36156063)
chr1 (287-341)||(7766846-7766900)
chr1 (287-345)||(17935793-17935851)
chr1 (287-345)||(46607834-46607892)
chr1 (280-345)||(7578426-7578491)
chr1 (280-345)||(15059517-15059582)
chr1 (280-345)||(20487305-20487370)
chr1 (280-345)||(27454981-27455046)
chr1 (280-345)||(29057452-29057517)
chr1 (280-345)||(30677193-30677258)
chr1 (280-345)||(34778359-34778424)
chr1 (272-345)||(37351576-37351649)
chr1 (282-345)||(9500470-9500533)
chr1 (280-345)||(7946861-7946926)
chr1 (280-345)||(21726746-21726811)
chr1 (269-345)||(16539614-16539690)
chr1 (281-345)||(23734134-23734198)
chr1 (281-345)||(23741326-23741390)
chr1 (280-345)||(168218-168283)
chr1 (280-345)||(14258542-14258607)
chr1 (280-345)||(18646870-18646935)
chr1 (287-345)||(2272368-2272426)
chr1 (280-330)||(8779866-8779916)
chr1 (287-345)||(23232380-23232438)
chr1 (280-342)||(32930766-32930828)
chr1 (280-345)||(19034501-19034566)
chr1 (280-345)||(25237104-25237169)
chr1 (281-332)||(1818752-1818803)
chr1 (287-345)||(1378922-1378980)
chr1 (280-345)||(32729562-32729627)
chr1 (280-330)||(809239-809289)
chr1 (287-345)||(24217002-24217060)
chr1 (280-309)||(6776161-6776190)
chr1 (282-342)||(25496606-25496666)
chr1 (281-345)||(39964530-39964594)
[»] scaffold0019 (1 HSPs)
scaffold0019 (282-345)||(161828-161891)
[»] scaffold0623 (1 HSPs)
scaffold0623 (280-345)||(1171-1236)
[»] scaffold0576 (1 HSPs)
scaffold0576 (280-345)||(5197-5262)
[»] scaffold0366 (2 HSPs)
scaffold0366 (280-345)||(9414-9479)
scaffold0366 (280-345)||(12115-12180)
[»] scaffold0460 (1 HSPs)
scaffold0460 (280-345)||(8294-8359)
[»] scaffold0459 (1 HSPs)
scaffold0459 (280-345)||(10808-10873)
[»] scaffold0199 (1 HSPs)
scaffold0199 (280-345)||(8522-8587)
[»] scaffold0070 (1 HSPs)
scaffold0070 (280-345)||(40342-40407)
[»] scaffold0051 (1 HSPs)
scaffold0051 (280-345)||(52986-53051)
[»] scaffold0049 (1 HSPs)
scaffold0049 (280-345)||(66779-66844)
[»] scaffold0026 (1 HSPs)
scaffold0026 (280-345)||(97481-97546)
[»] scaffold0217 (1 HSPs)
scaffold0217 (281-345)||(7424-7488)
[»] scaffold0157 (1 HSPs)
scaffold0157 (268-345)||(20224-20304)
[»] scaffold0068 (1 HSPs)
scaffold0068 (287-345)||(41759-41817)
[»] scaffold0328 (1 HSPs)
scaffold0328 (288-341)||(15016-15069)
[»] scaffold0717 (1 HSPs)
scaffold0717 (280-332)||(86-138)
[»] scaffold0028 (1 HSPs)
scaffold0028 (280-345)||(27793-27858)
[»] scaffold0240 (1 HSPs)
scaffold0240 (287-330)||(12884-12927)
[»] scaffold0102 (1 HSPs)
scaffold0102 (302-345)||(39131-39174)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 338
Target Start/End: Original strand, 25333159 - 25333498
Alignment:
Q  8 ccaccttgacatcaaacctaccttcactttcacactcccttcttaccacnnnnnnnnnnatatataaacatggttttcttctgttgaaaaaatctaattt 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||    
T  25333159 ccacctcgacatcaaacctaccttcactttcacactcccttcttaccactttttttt---tatataaacatggttttcttctgttgaaaaaatctaattt 25333255  T
Q  108 aaacattgacaaacacattgagttgccacatcagtaaaattagttaattcaacannnnnnnngttgctgtcaaaattgattaaaatgttgatggaactag 207  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  25333256 aaacattgacaaacacattgagttgccacatcaataaaattagttaattcaacattttttttgttgctgtcaaaattgattaaaatgttgatggaactag 25333355  T
Q  208 caaatgcaaaagaggataaacttgaaaggttaaaatcgagcaattaaaacttgagagggtaaacccatttgg------------ggttggtttgggatct 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||| |||||||||    
T  25333356 caaatgcaaaagaggataaacttgaaaggttaaaatcgagcaattaaaacttgagagggtaaacccatttggggttggcttagtggttggcttgggatct 25333455  T
Q  296 tggagtttgctcctccagaggtctcaggttcgattccgtctgg 338  Q
    ||||||||||| |||||||||||||||||||||| || |||||    
T  25333456 tggagtttgcttctccagaggtctcaggttcgataccctctgg 25333498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 7176042 - 7175977
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7176042 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 7175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 7275298 - 7275363
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7275298 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 7275363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 7800012 - 7799947
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7800012 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 7799947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 22119909 - 22119974
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22119909 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 22119974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 40543090 - 40543025
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40543090 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 40543025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 2103076 - 2103141
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  2103076 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaat 2103141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 2751292 - 2751357
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  2751292 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaat 2751357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 10091209 - 10091274
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  10091209 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaat 10091274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 11997870 - 11997935
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  11997870 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaat 11997935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 21218013 - 21217948
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  21218013 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaat 21217948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 21835172 - 21835237
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  21835172 ggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaat 21835237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 22299870 - 22299935
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  22299870 ggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaat 22299935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 22703507 - 22703572
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  22703507 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaat 22703572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 17197130 - 17197065
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  17197130 ggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaat 17197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 17212074 - 17212139
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  17212074 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaat 17212139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 18044128 - 18044193
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  18044128 ggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaat 18044193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 23854417 - 23854468
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23854417 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 31713075 - 31713009
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaata 346  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||| | |||||||||||||    
T  31713075 ggttggtttgggatcttggagtttgctcctcgagaggtctcaggattgatttcctctggtgccaata 31713009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 2344320 - 2344385
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| || |||||| ||||||||| ||||||||||||    
T  2344320 ggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaat 2344385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 13332603 - 13332538
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||    
T  13332603 ggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaat 13332538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 19421252 - 19421317
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||| ||||    
T  19421252 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaat 19421317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 27009380 - 27009445
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| || |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  27009380 ggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaat 27009445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 27312173 - 27312238
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  27312173 ggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaat 27312238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 42913693 - 42913628
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||||    
T  42913693 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaat 42913628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 14199846 - 14199781
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||  |||||||    
T  14199846 ggttgatttggaatcttggagtttcctcctccagaggtctcaggttcgattccctctaatgccaat 14199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 23012688 - 23012623
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||| |||||| ||| ||||||||    
T  23012688 ggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaat 23012623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 28089837 - 28089902
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||||| || ||||||| ||||    
T  28089837 ggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaat 28089902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 21370618 - 21370670
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  21370618 ggttggtttgggatcttggagtttactccttcagatgtctcaggttcgattcc 21370670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 31273942 - 31273993
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctgg 338  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  31273942 ttgggatcttggagtttgctcctccagagctctcaagttcgattccctctgg 31273993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 16374034 - 16374080
Alignment:
Q  299 agtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  16374034 agtttgctcctccagaggtctcagattcgattccctctggtgccaat 16374080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 39145825 - 39145767
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||| | ||||||||||    
T  39145825 ttgggatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaat 39145767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 42814892 - 42814950
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||  || ||||||||||||||||| ||||||| ||||    
T  42814892 ttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaat 42814950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 22264683 - 22264622
Alignment:
Q  279 gggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtg 340  Q
    |||||||||||| |||||||||||||||||||   ||||||||| ||||||||| |||||||    
T  22264683 gggttggtttggaatcttggagtttgctcctctcaaggtctcagattcgattccctctggtg 22264622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 22696341 - 22696406
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| |||||||||||||||| ||||||||   |||||||||||| |||||| ||||||||||||    
T  22696341 ggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaat 22696406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 27704023 - 27704088
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| ||||||| ||||||||||| |||||||||||||||||||| | | ||||||||||    
T  27704023 ggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaat 27704088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 32849619 - 32849664
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||    
T  32849619 ttgggatcttggagtttgctcctccagaggtctcgggtttgattcc 32849664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 654863 - 654819
Alignment:
Q  301 tttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaat 654819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 31197612 - 31197663
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||| |||||    
T  31197612 ggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattc 31197663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 37473639 - 37473690
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctcc-agaggtctcaggttcgattc 331  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  37473639 gttggtttgggatctaggagtttgctcctccttgaggtctcaggttcgattc 37473690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 28646997 - 28647055
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||| |||| |||   ||||||||||||||||||| ||||||||||||    
T  28646997 ttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaat 28647055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 28950911 - 28950957
Alignment:
Q  299 agtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  28950911 agtttgctccttcagaggtctcaggttcgactccctctggtgccaat 28950957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 29861711 - 29861756
Alignment:
Q  299 agtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  29861711 agtttgctcctc-agaggtctcaggttcgattccctctggtgccaat 29861756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 28003857 - 28003902
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggtt 325  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||    
T  28003857 ggttggcttgggatcttggagtttgctcctccagaagtcttaggtt 28003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 40332132 - 40332185
Alignment:
Q  292 atcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||| | ||||||||||||||||| | ||||||| ||||    
T  40332132 atcttggagtttgctcctctaaaggtctcaggttcgatttcctctggtgtcaat 40332185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 43785479 - 43785427
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||| |||||||||| ||| ||||||||||| |||||||| ||||||||||    
T  43785479 ggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattcc 43785427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 330
Target Start/End: Complemental strand, 36772471 - 36772432
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  36772471 gatcttggagtttgctcctctagaggtctcaggtttgatt 36772432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 9718152 - 9718102
Alignment:
Q  295 ttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||| | |||||| |||||||||| ||||||| ||||    
T  9718152 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaat 9718102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 22638324 - 22638374
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||||| |||||||||| | || ||||||||||||||||||| ||||||||    
T  22638324 gatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgc 22638374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 37693741 - 37693692
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    ||||||||||||||||||||| ||||||||   | |||||||||||||||    
T  37693741 gttggtttgggatcttggagtgtgctcctcttaatgtctcaggttcgatt 37693692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 21574283 - 21574231
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||||||| ||||||| ||||||||   ||||| |||||||||||||    
T  21574283 ggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcc 21574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 7e-31; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 14632964 - 14633040
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14632964 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 14633040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 15259586 - 15259521
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  15259586 ggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaat 15259521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 28193495 - 28193560
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28193495 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 28193560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 34237835 - 34237770
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34237835 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 34237770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 39349277 - 39349342
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39349277 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 39349342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 20469927 - 20470003
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  20469927 aacccatttgggattggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagagccaat 20470003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 3734803 - 3734738
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  3734803 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaat 3734738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4698903 - 4698838
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  4698903 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgtcaat 4698838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 4718666 - 4718731
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  4718666 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaat 4718731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 19471630 - 19471695
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  19471630 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaat 19471695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 19542554 - 19542619
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  19542554 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaat 19542619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 19590142 - 19590077
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  19590142 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaat 19590077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27746515 - 27746450
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  27746515 ggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaat 27746450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 2618207 - 2618272
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  2618207 ggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaat 2618272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 21603251 - 21603316
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||    
T  21603251 ggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaat 21603316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 18532128 - 18532180
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18532128 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 18532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 32879307 - 32879365
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  32879307 ttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaat 32879365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 42643291 - 42643233
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  42643291 ttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaat 42643233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 264579 - 264514
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  264579 ggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaat 264514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 651342 - 651407
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  651342 ggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaat 651407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 837077 - 837142
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  837077 ggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaat 837142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 20305929 - 20305994
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  20305929 ggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaat 20305994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 21092562 - 21092627
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  21092562 ggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaat 21092627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 2166721 - 2166772
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  2166721 gttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgattcc 2166772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 8765704 - 8765641
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| ||| |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  8765704 ttggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaat 8765641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 7558116 - 7558058
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||    
T  7558116 ttgggatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaat 7558058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 42328026 - 42328090
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||| |||||| |||| |||||||    
T  42328026 ggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaat 42328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 8042677 - 8042724
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgat 329  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||    
T  8042677 ttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 24018410 - 24018453
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||||||||||||||||||||||| |||||| ||||||||||    
T  24018410 ttgggatcttggagtttgctcctccaaaggtctgaggttcgatt 24018453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 28088314 - 28088372
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||| || |||||||||||||| ||||||||| | ||||| ||||    
T  28088314 ttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaat 28088372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 34610876 - 34610802
Alignment:
Q  271 cccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||| |||||| || |||| |||||||||| || |||||| |||| |||||||||||| |||| |||||||    
T  34610876 cccatttgtggttggcttaggattttggagtttgttcatccagatgtctgaggttcgattccctctgatgccaat 34610802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 34694745 - 34694691
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||   |||||| |||||||||||| ||||||||||||    
T  34694745 gatcttggagtttgctcctctcaaggtcttaggttcgattccatctggtgccaat 34694691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 22200740 - 22200675
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||| || |||   | ||||||||||||||||| ||| ||||||||    
T  22200740 ggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccctctagtgccaat 22200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 28964054 - 28964119
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||| |||||| |||||||||||||   |||| ||| |||||||||| ||||||||||||    
T  28964054 ggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgattccatctggtgccaat 28964119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 26169021 - 26168963
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||   |||||||||||| ||||||  ||| |||||||    
T  26169021 ttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaat 26168963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 3403686 - 3403617
Alignment:
Q  276 ttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||  || ||||||||||||||||| ||   |||||| | |||||||||| ||||||||||||    
T  3403686 ttggggttggcctgagatcttggagtttgctcatctcaaggtcttatgttcgattccatctggtgccaat 3403617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 3794812 - 3794877
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| || |||||||| ||||||||||||   |||||||| ||||| |||| ||||||||||||    
T  3794812 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaat 3794877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 9047458 - 9047421
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggt 317  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  9047458 ggttggtttgagatcttggagtttgctcctccaaaggt 9047421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 34639386 - 34639322
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||| ||||||||   |||||||||| |||| ||| ||||||||||||    
T  34639386 ggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcga-tccctctggtgccaat 34639322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 43374516 - 43374440
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  43374516 aacccatttggggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaat 43374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 10582170 - 10582105
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10582170 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 10582105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 17324783 - 17324848
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17324783 ggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 17324848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 41314009 - 41314074
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  41314009 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaat 41314074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 36242503 - 36242427
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||    
T  36242503 aacccatttggggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaat 36242427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 5394026 - 5394099
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  5394026 ccatttggggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaat 5394099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 33827753 - 33827688
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  33827753 ggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaat 33827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 44946233 - 44946168
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  44946233 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaat 44946168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 44976334 - 44976269
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  44976334 ggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaat 44976269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 45271390 - 45271466
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||||| ||| |||||||||| ||||||||||||    
T  45271390 aacccatttggggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaat 45271466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 25293190 - 25293248
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  25293190 ttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaat 25293248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 11941390 - 11941325
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  11941390 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaat 11941325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 27290605 - 27290670
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  27290605 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaat 27290670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 267 - 345
Target Start/End: Original strand, 1191518 - 1191595
Alignment:
Q  267 taaacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| |||| ||| || |||||    
T  1191518 taaacccatttggg-ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccctctagtaccaat 1191595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 18976605 - 18976548
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctg 337  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  18976605 ggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctg 18976548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 15037985 - 15038041
Alignment:
Q  289 gggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  15037985 gggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaat 15038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 34516588 - 34516537
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  34516588 ggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattc 34516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 4852582 - 4852636
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4852582 ttggaatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgc 4852636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 32845115 - 32845173
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||| | || |||||||||||||| ||||||||||||    
T  32845115 ttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaat 32845173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 8192531 - 8192466
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||| ||||||||   ||||||||||||||||||| ||||||||||||    
T  8192531 ggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaat 8192466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 8258914 - 8258971
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctg 337  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  8258914 ggttagtttgagatcttggagtttgctcctccagatgtctcaggttcgattccctctg 8258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 13266499 - 13266572
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| ||| ||||||||| |||||||||  |||||||||| |||||||||  ||||||||||||    
T  13266499 ccatttggggttggcttgagatcttggaatttgctcctttagaggtctcatgttcgattcactctggtgccaat 13266572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 30467010 - 30466945
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||||||||  |||| |||||||    
T  30467010 ggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaat 30466945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 41329860 - 41329925
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| |||||||||||| ||||||||||||||| |||| |||| ||||||||| ||||||||||||    
T  41329860 ggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctggtgccaat 41329925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 4567616 - 4567552
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| | ||||||||||||    
T  4567616 gttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctctggtgccaat 4567552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 6714461 - 6714409
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| ||||||    
T  6714461 ggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattcc 6714409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 35171831 - 35171875
Alignment:
Q  294 cttggagtttgctcctccagaggtctcaggttcgattccgtctgg 338  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctgg 35171875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 36390746 - 36390683
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||  ||||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  36390746 ggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatttcctctggtgccaat 36390683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 24196021 - 24196082
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||||| ||||||| |||| ||| |||||||||||||| |||||||||||||| ||||||||    
T  24196021 ggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccctctggtgc 24196082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 19849850 - 19849902
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||| |||||||||||||||||||||| |||||| | ||||||||||    
T  19849850 ggttggtttgagatcttggagtttgctcctccaaaggtcttaagttcgattcc 19849902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 19054044 - 19054102
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtg 340  Q
    |||| ||| ||||||||||| |||||||||| |||||||||||| |||||| |||||||    
T  19054044 ttggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattccttctggtg 19054102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 40997523 - 40997478
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||    
T  40997523 ttgggatcttggagtttgctcctccaaaggtctcatgttcaattcc 40997478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 44610091 - 44610140
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgat 329  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||||||    
T  44610091 ggttggcttgagatcttggagtttgctcttccaaaggtctcaggttcgat 44610140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 32526265 - 32526213
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    ||||| |||||||||||| ||||||||||||   |||||||||||||||||||    
T  32526265 ggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattcc 32526213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 28194311 - 28194248
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| ||||||||||||||| ||||||||   |||||| |||||||||||  ||||||||||||    
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaat 28194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 29698151 - 29698194
Alignment:
Q  267 taaacccatttggggttggtttgggatcttggagtttgctcctc 310  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||    
T  29698151 taaaccaatttggggttggcttgggatcttggaatttgctcctc 29698194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 19525585 - 19525511
Alignment:
Q  271 cccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| ||||||||| ||||||||||| ||| || | |||   || |||||||||||||||| ||||||||||||    
T  19525585 cccatctggggttggcttgggatcttgaagtgtgtttctctcaagatctcaggttcgattccctctggtgccaat 19525511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 29361573 - 29361615
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggt 324  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  29361573 ttggattgggatcttggagtttgctcctccaaagatctcaggt 29361615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 23787188 - 23787123
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||  || ||||| |||||| || || |||||||||||| |||||| ||||||||||||    
T  23787188 ggttggtttgaaattttggaatttgcttctacaaaggtctcaggtttgattccctctggtgccaat 23787123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 2140634 - 2140598
Alignment:
Q  309 tccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  2140634 tccagaggtctcaggttcgattccctctggtgtcaat 2140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 6099571 - 6099519
Alignment:
Q  279 gggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    ||||||| |||||| |||||||| ||||||||   ||||||||||||||||||    
T  6099571 gggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 6099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 19606025 - 19605973
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||| |||||||||||||||  |||||||   |||||||||||||||||||    
T  19606025 ggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattcc 19605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 27269530 - 27269470
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtg 340  Q
    |||||| |||||||||| ||||||||||||| | |||| | ||||| |||||| |||||||    
T  27269530 ggttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccctctggtg 27269470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 38341746 - 38341806
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    ||||||| |||||  ||||||||||| ||||||||||||   ||||||||| |||||||||    
T  38341746 ccatttgaggttgacttgggatcttgaagtttgctcctctcaaggtctcagattcgattcc 38341806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 7392157 - 7392078
Alignment:
Q  266 gtaaacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  7392157 gtaaacccatttggggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaat 7392078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27528975 - 27528910
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27528975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 27528910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 49287875 - 49287940
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  49287875 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaat 49287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 25852231 - 25852296
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  25852231 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaat 25852296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 32986214 - 32986279
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  32986214 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaat 32986279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 33696459 - 33696394
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  33696459 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaat 33696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 33992643 - 33992708
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  33992643 ggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaat 33992708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 52983636 - 52983701
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52983636 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 52983701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 51535637 - 51535695
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  51535637 ttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaat 51535695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 1985853 - 1985914
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  1985853 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgc 1985914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 2351030 - 2351095
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  2351030 ggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 2351095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 22625250 - 22625185
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  22625250 ggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaat 22625185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 40059032 - 40058967
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  40059032 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaat 40058967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 20078163 - 20078099
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaat 20078099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 35229185 - 35229237
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35229185 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 35229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 12500253 - 12500173
Alignment:
Q  268 aaacccatttggggttggt---ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| ||||||||||||||   ||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  12500253 aaactcatttggggttggtctattgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaat 12500173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 13873468 - 13873410
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  13873468 ttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaat 13873410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 20566366 - 20566432
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggt-ctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  20566366 ggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaat 20566432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 34844927 - 34844873
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  34844927 gatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaat 34844873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 46714409 - 46714459
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46714409 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 54127522 - 54127457
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||    
T  54127522 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaat 54127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 19660712 - 19660661
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  19660712 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattc 19660661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 43719245 - 43719194
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  43719245 ggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattc 43719194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 30879354 - 30879280
Alignment:
Q  271 cccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||| ||||||||||| ||  ||| | ||||| |||||| ||||||||||||    
T  30879354 cccatttggggttggtttgggatcttgtagtttgctccttcatgggttttaggtttgattccctctggtgccaat 30879280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 5609382 - 5609317
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||| | ||| |||||||||||||||||  ||||||||||||    
T  5609382 ggttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctggtgccaat 5609317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 35674921 - 35674856
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||| ||||||    
T  35674921 ggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaat 35674856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 45787883 - 45787819
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||| |||||||| ||||||||||||||| |||||||||||||||| |||| |||||||    
T  45787883 ggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccctctgatgccaat 45787819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 20527212 - 20527148
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||| ||| |||||||||| |||||||||||||||| ||| |||||| ||||| ||||||    
T  20527212 gttggtttgagattttggagtttgttcctccagaggtctcaagtttgattccctctggcgccaat 20527148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 310
Target Start/End: Original strand, 39288878 - 39288913
Alignment:
Q  275 tttggggttggtttgggatcttggagtttgctcctc 310  Q
    ||||||||||||||||||||||||||||||||||||    
T  39288878 tttggggttggtttgggatcttggagtttgctcctc 39288913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 44343533 - 44343592
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||| |||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||||    
T  44343533 ttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgc 44343592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 55961922 - 55961883
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtct 319  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  55961922 ggttggcttgggatcttggagtttgctcctccagaggtct 55961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 30938269 - 30938219
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctcc-agaggtctcaggttcgattc 331  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  30938269 ttggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattc 30938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 36131683 - 36131625
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||| |||||||| | ||||||||| ||||||||||||||||| | ||||||||||    
T  36131683 ttgggattttggagttcgttcctccagatgtctcaggttcgattccctatggtgccaat 36131625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 32942387 - 32942452
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| ||||||||||||| ||||||||||||| | |||||||||||  |||| |||||||    
T  32942387 ggttggcttgagatcttggagtttactcctccagaggtttaaggttcgattctctctgatgccaat 32942452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34835546 - 34835611
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| |||||||||||||   |||||||| |||||||||| ||||||| ||||    
T  34835546 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaat 34835611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 12710196 - 12710248
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||||||||||||||| |||| |||   |||||||||||||||||||    
T  12710196 ggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattcc 12710248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 38869794 - 38869858
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccaga-ggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| ||||||||| ||||| |||||||||  | |||||||||||||||||| ||||||||||||    
T  38869794 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaat 38869858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 315
Target Start/End: Original strand, 34722187 - 34722222
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagag 315  Q
    |||||| |||||||||||||||||||||||||||||    
T  34722187 ggttggcttgggatcttggagtttgctcctccagag 34722222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 13584419 - 13584369
Alignment:
Q  295 ttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||| | |||||| |||||||||| ||||||| ||||    
T  13584419 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaat 13584369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 41621776 - 41621711
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| ||||||||||||||||||||   |||||||| ||| |||| | ||||||||||||    
T  41621776 ggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaat 41621711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 42245770 - 42245815
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||| ||||||||||||| | ||||||| |||||||||||    
T  42245770 ttgggatcttagagtttgctcctctaaaggtctcgggttcgattcc 42245815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 13038634 - 13038569
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13038634 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 13038569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 19456401 - 19456325
Alignment:
Q  268 aaacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  19456401 aaacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcga-tccctctggtgccaat 19456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 11926682 - 11926617
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  11926682 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaat 11926617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 12398639 - 12398563
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||    
T  12398639 aacccatttggggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaat 12398563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 18207226 - 18207289
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  18207226 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaat 18207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 38684232 - 38684290
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38684232 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 38684290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 8484841 - 8484776
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  8484841 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaat 8484776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 13108629 - 13108564
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  13108629 ggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaat 13108564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 15641285 - 15641220
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  15641285 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaat 15641220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 25586949 - 25587014
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  25586949 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaat 25587014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 32059620 - 32059555
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  32059620 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaat 32059555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 33709681 - 33709616
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  33709681 ggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaat 33709616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 37495064 - 37495129
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37495064 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 37495129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 38631141 - 38631076
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  38631141 ggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaat 38631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 7151332 - 7151404
Alignment:
Q  266 gtaaacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctgg 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||| ||| |||||    
T  7151332 gtaaacccatttggggttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctgg 7151404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 34310166 - 34310224
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34310166 ttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 34310224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 22392718 - 22392775
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctg 337  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22392718 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 22392775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27498911 - 27498846
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  27498911 ggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaat 27498846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 34049840 - 34049891
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34049840 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 15971302 - 15971252
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15971302 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 15971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 1827710 - 1827653
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctg 337  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  1827710 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctg 1827653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 4603794 - 4603859
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| || ||||| |||||||||| ||||||||||||    
T  4603794 ggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaat 4603859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 30485845 - 30485910
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||  ||||||| ||||    
T  30485845 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtcaat 30485910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 31288126 - 31288061
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||||    
T  31288126 ggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaat 31288061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 36954842 - 36954894
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggt 339  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  36954842 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggt 36954894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 6014458 - 6014395
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||| | ||||||||||||    
T  6014458 ttggcttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaat 6014395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 10869734 - 10869680
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  10869734 gatcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaat 10869680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 7085806 - 7085741
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||| ||||    
T  7085806 ggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccctctagtgtcaat 7085741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 17015601 - 17015528
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| ||| ||||||| ||||| ||| | ||||||||||||||| |||||| ||||||||||||    
T  17015601 ccatttggggttggcttgagatcttgaagtttcctctttcagaggtctcaggtttgattccctctggtgccaat 17015528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 15931083 - 15931141
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||| || || | ||||||||||||||||| ||||||||||||    
T  15931083 ttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctctggtgccaat 15931141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 42193509 - 42193567
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||| | ||||||||||||||||||||| | |||| |||||||    
T  42193509 ttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaat 42193567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 11465075 - 11465022
Alignment:
Q  292 atcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||| | ||||||||||||||| | ||||||||||||    
T  11465075 atcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaat 11465022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 25750784 - 25750724
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcg--attccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||||| ||| |  ||||| ||||||||||||    
T  25750784 ttgggatcttggagtttgctcctccagaggtctcaagttggatattccttctggtgccaat 25750724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27487735 - 27487670
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||| ||| || | ||||||||||    
T  27487735 ggttgatttgggattttggagtttgctcttccagaggtctcaggtttgatcccatttggtgccaat 27487670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 5067325 - 5067368
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||||||| |||||||||||||||||| ||||||||||||||    
T  5067325 ttgggatcttcgagtttgctcctccagagatctcaggttcgatt 5067368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 3715089 - 3715055
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccaga 314  Q
    |||||||||||||||||||||||||||||||||||    
T  3715089 ggttggtttgggatcttggagtttgctcctccaga 3715055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 19145584 - 19145526
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||| ||||||||   ||||||| ||||||||||| ||||||||||||    
T  19145584 ttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaat 19145526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 23270702 - 23270652
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||| ||||||||||||||||||||| |||| |||||||| ||||||||    
T  23270702 ggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatt 23270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 37397730 - 37397795
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| |||||||||||||||||||||| |||||| ||||| ||||||  |||||| ||||    
T  37397730 ggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattccccctggtgtcaat 37397795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 12317330 - 12317265
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||| |||||||||||||||||||  |||||||| |||| |||| | ||||||| ||||    
T  12317330 ggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatttcatctggtgtcaat 12317265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 15485472 - 15485419
Alignment:
Q  279 gggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    ||||||| |||||| |||||||| ||||||||   |||||||||||||||||||    
T  15485472 gggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattcc 15485419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 16616137 - 16616186
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    ||||| |||||||||||||||||||||||| | || |||||| |||||||    
T  16616137 gttggcttgggatcttggagtttgctcctctaaagatctcagattcgatt 16616186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 26009444 - 26009379
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||  |||||| |||||| | |||| || ||||||||||| | ||||||||||    
T  26009444 ggttggtttgggatctcagagtttactcctcgaaaggtttccggttcgattccctttggtgccaat 26009379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 9238992 - 9239057
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9238992 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 9239057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 654319 - 654261
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  654319 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 654261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 11448888 - 11448953
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  11448888 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaat 11448953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 14212909 - 14212974
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14212909 ggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 14212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 15360278 - 15360213
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  15360278 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaat 15360213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 22576084 - 22576149
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  22576084 ggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaat 22576149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 1344960 - 1345017
Alignment:
Q  288 tgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  1344960 tgggatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaat 1345017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 12591654 - 12591719
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  12591654 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaat 12591719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34147363 - 34147428
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  34147363 ggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaat 34147428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34159979 - 34160044
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  34159979 ggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaat 34160044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 17706498 - 17706422
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||| |||||  |||||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||    
T  17706498 aacccatttgtggttgacttgggatcttggagtttgctcctccagaagtctcaagttcgattccttctggtgtcaat 17706422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 331
Target Start/End: Complemental strand, 28968230 - 28968171
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  28968230 ccatttggggttggcttgggatcttggagtttgctcctctagaggtctcagattcgattc 28968171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 3222814 - 3222750
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3222814 ggttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaat 3222750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 13753257 - 13753322
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  13753257 ggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaat 13753322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 11007182 - 11007233
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  11007182 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 11007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 5360251 - 5360186
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||  |||||||    
T  5360251 ggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaat 5360186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 9208269 - 9208334
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||   |||||||||||||||||||  |||||||||||    
T  9208269 ggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaat 9208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 9843955 - 9844020
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| | | ||||||| ||||    
T  9843955 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaat 9844020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 11840918 - 11840983
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||| || || ||||||||||||||||||||||| |||||||| ||||||||||||    
T  11840918 ggttggcttgggatattagaatttgctcctccagaggtctcaggctcgattccctctggtgccaat 11840983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 17149636 - 17149575
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||||| ||||||||    
T  17149636 ggttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgc 17149575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 21982500 - 21982435
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||   ||||||||||    
T  21982500 ggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaat 21982435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 33718638 - 33718577
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||  ||||||||    
T  33718638 ggttggtttgggatcttggagtttacttctccagagatctcaggttcgattctctctggtgc 33718577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 12390465 - 12390507
Alignment:
Q  303 tgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  12390465 tgctcctccagaggtctcaggttcgattccctctggtgccaat 12390507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 28672095 - 28672149
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  28672095 gatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaat 28672149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 17081234 - 17081169
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| || ||||||||||||||||||||||||| |||||| ||| |||||| ||||||| ||||    
T  17081234 ggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaat 17081169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 21148690 - 21148625
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||  | ||||||||||| |||||||||| ||| ||||||||    
T  21148690 ggttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccctctagtgccaat 21148625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 9690818 - 9690768
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||||||| ||| ||||||||||||| ||||||||||| ||||||||||    
T  9690818 ggttggtttgagattttggagtttgctcttccagaggtcttaggttcgatt 9690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 33499491 - 33499557
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttc-gattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||   ||||||||||||| |||||| ||||||| ||||    
T  33499491 ggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaat 33499557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 28742013 - 28741961
Alignment:
Q  288 tgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtg 340  Q
    |||||||||||||| ||||||||   ||||||||||||||||||  |||||||    
T  28742013 tgggatcttggagtgtgctcctctcaaggtctcaggttcgattcgttctggtg 28741961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 26108309 - 26108374
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26108309 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 26108374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 30807333 - 30807268
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30807333 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 30807268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 35492928 - 35492993
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35492928 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 35492993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 40940842 - 40940907
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40940842 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 40940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 46576365 - 46576430
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46576365 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 46576430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 10084010 - 10083934
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||    
T  10084010 aacccatttggggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaat 10083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 10190933 - 10190857
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||    
T  10190933 aacccatttggggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaat 10190857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 52821808 - 52821750
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52821808 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 52821750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 8456330 - 8456265
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8456330 ggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 8456265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 25289894 - 25289829
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  25289894 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaat 25289829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 25379778 - 25379843
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  25379778 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaat 25379843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 26174130 - 26174195
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  26174130 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaat 26174195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 45529934 - 45529869
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  45529934 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaat 45529869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 52455829 - 52455764
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52455829 ggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 52455764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 53424356 - 53424291
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  53424356 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaat 53424291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 21362967 - 21363025
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21362967 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaat 21363025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 48977412 - 48977470
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  48977412 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaat 48977470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 15566679 - 15566614
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  15566679 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaat 15566614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 30257641 - 30257706
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  30257641 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaat 30257706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 34492755 - 34492690
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  34492755 ggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaat 34492690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 49258442 - 49258377
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  49258442 ggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaat 49258377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 53234090 - 53234025
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  53234090 ggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaat 53234025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 29915442 - 29915386
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgcca 343  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29915442 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgcca 29915386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 29964595 - 29964539
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgcca 343  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29964595 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgcca 29964539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 45272595 - 45272531
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  45272595 gttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaat 45272531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 7485698 - 7485640
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  7485698 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaat 7485640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 39042025 - 39041967
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  39042025 ttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaat 39041967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 9853633 - 9853698
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||||    
T  9853633 ggttagtttgggatcttggagtttgctcctccaaaggtctcaggttcgattcccaccggtgccaat 9853698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 31538018 - 31537953
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  31538018 ggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaat 31537953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 40133629 - 40133564
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  40133629 ggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaat 40133564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 53288892 - 53288827
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| || ||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  53288892 ggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccctctggtgccaat 53288827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 18177056 - 18177002
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  18177056 gatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaat 18177002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 55287820 - 55287885
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||| ||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  55287820 ggttggcttggaatcttagagtttgctccttcagaggtttcaggttcgattccctctggtgccaat 55287885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 1692863 - 1692903
Alignment:
Q  292 atcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattcc 1692903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 19857078 - 19857133
Alignment:
Q  290 ggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||    
T  19857078 ggatcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaat 19857133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 7470384 - 7470330
Alignment:
Q  291 gatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||  |||||||    
T  7470384 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaat 7470330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 14343468 - 14343418
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |||||||    
T  14343468 ggttggtttgagatcttggagtttgctcctccagatgtctcagattcgatt 14343418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 9842938 - 9843002
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||||||||  |||||| ||||    
T  9842938 ggttggtttgggatcttggagttttctcctccagaggtctc-gattcgattcccactggtgtcaat 9843002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 50583009 - 50583074
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||   |||| |||||||||||| | |||| |||||||    
T  50583009 ggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaat 50583074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 25344230 - 25344172
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||| | ||||| ||||    
T  25344230 ttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaat 25344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 8958228 - 8958151
Alignment:
Q  268 aaacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||| |||  ||||||||||||||| ||||||| || |||||| | |||||||| | ||||||| ||||    
T  8958228 aaacccatttgggattgacttgggatcttggagtctgctccttcaaaggtcttatgttcgatttcctctggtgtcaat 8958151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 49167073 - 49167138
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| |||||||||||||||||||||| || | |||||||||||||  ||||||| ||||    
T  49167073 ggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaat 49167138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 38732990 - 38733034
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||    
T  38732990 ttggaatcttggagtttgttcctccagaggtctcaggtccgattc 38733034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 25017542 - 25017597
Alignment:
Q  290 ggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||| || ||| |||||||||||| ||| ||| ||||    
T  25017542 ggatcttggagtttgctcctccaaagatcttaggttcgattccatctagtgtcaat 25017597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 36660787 - 36660838
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    ||||||||| |||||||||||||||||||||   ||||||||||||| ||||    
T  36660787 ggttggtttaggatcttggagtttgctcctctcaaggtctcaggttcaattc 36660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 32151448 - 32151506
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||| |||| |||  ||||||||  ||| ||||||||    
T  32151448 ttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaat 32151506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 51532807 - 51532857
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 331  Q
    ||||||||| ||| |||||||||||| ||||| |||||||| |||||||||    
T  51532807 gttggtttgagattttggagtttgcttctccaaaggtctcatgttcgattc 51532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 2511449 - 2511412
Alignment:
Q  308 ctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  2511449 ctccataggtctcaggttcgattccctctggtgccaat 2511412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4252576 - 4252511
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| ||||||||||| ||||||||   |||||||| ||| |||||| ||||||||||||    
T  4252576 ggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaat 4252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 11390619 - 11390684
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||| ||||||||||||| |||||||| || | ||||||| |||| | ||||||| ||||    
T  11390619 ggttggtttgagatcttggagttttctcctccaaagatttcaggtttgatttcctctggtgtcaat 11390684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 33398644 - 33398583
Alignment:
Q  284 ggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| ||||||||| || | || ||||| |||||||||| ||| ||||||||    
T  33398644 ggtttgggatcttgtagtttgctcttctaaagatctcaagttcgattccctctagtgccaat 33398583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 4621417 - 4621352
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4621417 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 4621352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 24674410 - 24674475
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24674410 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 24674475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 45859231 - 45859158
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  45859231 ccatttggagttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaat 45859158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 46113582 - 46113517
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  46113582 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaat 46113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 33905698 - 33905631
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggt 339  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33905698 ccatttagggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggt 33905631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 7197426 - 7197361
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  7197426 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaat 7197361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 8077664 - 8077729
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8077664 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaat 8077729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 24122040 - 24122105
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  24122040 ggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaat 24122105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 36156063 - 36156003
Alignment:
Q  285 gtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  36156063 gtttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaat 36156003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 7766900 - 7766846
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7766900 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgc 7766846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 17935793 - 17935851
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  17935793 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaat 17935851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 46607834 - 46607892
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  46607834 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaat 46607892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 7578426 - 7578491
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  7578426 ggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaat 7578491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 15059582 - 15059517
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  15059582 ggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaat 15059517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 20487370 - 20487305
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  20487370 ggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaat 20487305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27455046 - 27454981
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  27455046 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaat 27454981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 29057517 - 29057452
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||    
T  29057517 ggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctcttgtgccaat 29057452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 30677193 - 30677258
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  30677193 ggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaat 30677258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34778359 - 34778424
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||    
T  34778359 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaat 34778424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 37351649 - 37351576
Alignment:
Q  272 ccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||| |||| |||||||    
T  37351649 ccatttgtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaat 37351576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 9500533 - 9500470
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctggtgccaat 9500470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 7946861 - 7946926
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  7946861 ggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaat 7946926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 21726746 - 21726811
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  21726746 ggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaat 21726811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 16539614 - 16539690
Alignment:
Q  269 aacccatttggggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||  ||||||    |||||||||||| |||||| ||||||||||||    
T  16539614 aacccatttggggttggtttgggatcttggagtgagctccttgcaaggtctcaggtttgattccctctggtgccaat 16539690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 23734134 - 23734198
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||    
T  23734134 gttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaat 23734198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 23741326 - 23741390
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||    
T  23741326 gttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaat 23741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 168218 - 168283
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||||||| ||||||||||||    
T  168218 ggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaat 168283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 14258607 - 14258542
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||| ||||||||| ||||| ||||||||||| |||||| |||||    
T  14258607 ggttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccctctggtaccaat 14258542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 18646870 - 18646935
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||| |||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  18646870 ggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctggtgccaat 18646935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 2272368 - 2272426
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  2272368 ttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaat 2272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 8779916 - 8779866
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  8779916 ggttgatttgggatcttggagtttgcttctccagaggtctcagcttcgatt 8779866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 23232438 - 23232380
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||| ||||| ||||||    
T  23232438 ttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaat 23232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 32930766 - 32930828
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgcc 342  Q
    ||||||||||| |||||||||||| ||||| ||||||||||| |||||||| | |||||||||    
T  32930766 ggttggtttggaatcttggagtttactccttcagaggtctcaagttcgatttcctctggtgcc 32930828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 19034566 - 19034501
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||||||||||||| ||||| | |||| ||||||||||||   ||||||||||||    
T  19034566 ggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaat 19034501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 25237169 - 25237104
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| |||||||||||||||||||||| |||   ||||||||||||||||||| ||| ||||||||    
T  25237169 ggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaat 25237104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 1818752 - 1818803
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||||    
T  1818752 gttggcttaggatcttggagtttgctcttccagaggtttcaggttcgattcc 1818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 1378922 - 1378980
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||| | |||||| |||||||| | ||||||| ||||    
T  1378922 ttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaat 1378980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 32729562 - 32729627
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||| |||||||||||||   | ||||||||||||||||| | ||||||||||    
T  32729562 ggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaat 32729627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 809239 - 809289
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||||||||||||||||||||| ||||||   |||||||||||| ||||    
T  809239 ggttggtttgggatcttggagtttactcctcttaaggtctcaggtttgatt 809289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 24217002 - 24217060
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||||||||||||| ||||||||   ||||||||||||||||| | | ||||||||||    
T  24217002 ttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaat 24217060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 309
Target Start/End: Original strand, 6776161 - 6776190
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcct 309  Q
    ||||||||||||||||||||||||||||||    
T  6776161 ggttggtttgggatcttggagtttgctcct 6776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 25496666 - 25496606
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgcc 342  Q
    |||| |||||||||||||| |||||||||   |||||||| |||||||||| ||| |||||    
T  25496666 ttggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccctctagtgcc 25496606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 39964530 - 39964594
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| ||| || |||||||| ||||||||   |||||||||||| |||||| ||||||||||||    
T  39964530 gttggcttgcgaccttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaat 39964594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 161828 - 161891
Alignment:
Q  282 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaat 161891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 1236 - 1171
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  1236 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaat 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 5262 - 5197
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  5262 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaat 5197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 9479 - 9414
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  9479 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaat 9414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 12180 - 12115
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  12180 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaat 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 8359 - 8294
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  8359 ggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaat 8294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 10873 - 10808
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  10873 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaat 10808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 8587 - 8522
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  8587 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaat 8522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 40342 - 40407
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| || |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  40342 ggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaat 40407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 53051 - 52986
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  53051 ggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaat 52986  T

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Target: scaffold0049 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 66779 - 66844
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  66779 ggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaat 66844  T

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Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 97546 - 97481
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  97546 ggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaat 97481  T

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Target: scaffold0217 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 7488 - 7424
Alignment:
Q  281 gttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  7488 gttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaat 7424  T

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Target: scaffold0157 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 20224 - 20304
Alignment:
Q  268 aaacccatttggggttggt---ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||| ||||||||||||||   ||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  20224 aaactcatttggggttggtctattgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaat 20304  T

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Target: scaffold0068 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 41817 - 41759
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  41817 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaat 41759  T

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Target: scaffold0328 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 15016 - 15069
Alignment:
Q  288 tgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgc 341  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  15016 tgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgc 15069  T

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Target: scaffold0717 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 138 - 86
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 332  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  138 ggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattcc 86  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 27793 - 27858
Alignment:
Q  280 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||| ||||||||||||||||   ||||||| ||||||||||| | ||||||||||    
T  27793 ggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccctgtggtgccaat 27858  T

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Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 12927 - 12884
Alignment:
Q  287 ttgggatcttggagtttgctcctccagaggtctcaggttcgatt 330  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  12927 ttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

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Target: scaffold0102 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 39131 - 39174
Alignment:
Q  302 ttgctcctccagaggtctcaggttcgattccgtctggtgccaat 345  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  39131 ttgctcctccagaggtctcaagttcgattccctctggtgccaat 39174  T

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