View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2859-Insertion-6 (Length: 672)
Name: NF2859-Insertion-6
Description: NF2859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2859-Insertion-6 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 180; Significance: 7e-97; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 212 - 487
Target Start/End: Original strand, 12018516 - 12018785
Alignment:
| Q |
212 |
atgaatctaaaaatgcaaaaattgcttataaatatgatcgaaatgagtaatttataagttattttgagcttattagttctccaagataatgaannnnnnn |
311 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12018516 |
atgaatctaaaaatgcaaaagttgcttgtaaatatgaccgaaatgagtaattcataagttattttgagcttattagttctccaagataatga------tt |
12018609 |
T |
 |
| Q |
312 |
nnnnnnnnntaaatattatagtacaaaagcattacgtgatataattgaaatttcaactatgtttgtcccctaaaccaccgcatatcattcatttacagaa |
411 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12018610 |
ttttttttttaaatattatagtacaaaagcatcacgtgatataattgaaatttcaactatgtttgtcccctaaaccaccgcatatcattcatttacagaa |
12018709 |
T |
 |
| Q |
412 |
ccctaataattttaataaagaaaaatgatacaacgatttggggaactagaccaaaatctaagataacaatgaagat |
487 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||| ||||| |
|
|
| T |
12018710 |
ccctaataattttaataaagaaaaatgaaacaacgattcgggaaactagaccaaaacctaagataacaatcaagat |
12018785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 12018294 - 12018492
Alignment:
| Q |
7 |
attattaaagtcaatatatcatgcatgaaggctgggaaatagcctaaagtgtttcttaattgacttatttgagtttatctactgatataagttttgtatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
12018294 |
attattaaagtcaatatatcatgcatgaagactgggaaatagcctaaagtgtttcttaattgacgtatttgagtttattta--------agttttgtatt |
12018385 |
T |
 |
| Q |
107 |
atgatttgaaaaaggcttatgacatactccctctggtcagtcacatatataaacaacttttgattatttatgttcattaaataaatgatgtatatgggct |
206 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| || ||| |
|
|
| T |
12018386 |
attgtttgaaaaaggcttatgacatactccctctggtcggtcacatatataaacaattttttattatttatattcattaaataaatgttgtatctgagct |
12018485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 545 - 672
Target Start/End: Original strand, 12018780 - 12018902
Alignment:
| Q |
545 |
caagatgatgagaaaaagggtgcggtgcaaagcaagtaattaagcaacataagataacaatacttatgaatacagtttatagcttatnnnnnnntaattt |
644 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
12018780 |
caagatgatgagaaaaagagtgcggtgcaaagcaagtaa----gcaacataagataacaatacttatgaaaacagtttatagcttataaaaaaacaattt |
12018875 |
T |
 |
| Q |
645 |
gactttattttttctctttactataaaa |
672 |
Q |
| |
|
|||||||||||||||| ||||||||||| |
|
|
| T |
12018876 |
gactttattttttctc-ttactataaaa |
12018902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 7244580 - 7244618
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
7244580 |
attgacctatttgagtttatctattgatataagttttgt |
7244618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 17009507 - 17009539
Alignment:
| Q |
64 |
aattgacttatttgagtttatctactgatataa |
96 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
17009507 |
aattgacttatttgagtttatctactgacataa |
17009539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 39976138 - 39976174
Alignment:
| Q |
67 |
tgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
39976138 |
tgacttatttgagattatctactgacataagttttgt |
39976174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 11532994 - 11533042
Alignment:
| Q |
210 |
ttatgaatctaaaaatgcaaaaattgcttataaatatgatcgaaatgag |
258 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11532994 |
ttatgaatctaaaaaaataaaaattgcttataaatatgatcgaaatgag |
11533042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 2416457 - 2416419
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
2416457 |
attgacttatttgagtttatctactaacataagttttgt |
2416419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 37419593 - 37419625
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataag |
97 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
37419593 |
attgacttatttgagtttatctacttatataag |
37419625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 42419937 - 42419901
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagtttt |
101 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
42419937 |
attgacttatttgagtttatcttctgacataagtttt |
42419901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 13412796 - 13412729
Alignment:
| Q |
146 |
gtcacatatataaacaacttttgattatttatgttcattaaataaatgatgtatatgggctatattat |
213 |
Q |
| |
|
||||||| ||||| ||||||||| || || ||||||||||||||| |||||||| ||||| ||||||| |
|
|
| T |
13412796 |
gtcacatttataagcaacttttgctttttcatgttcattaaataactgatgtatctgggcaatattat |
13412729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 25606287 - 25606253
Alignment:
| Q |
64 |
aattgacttatttgagtttatctactgatataagt |
98 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25606287 |
aattgacgtatttgagtttatctactgatataagt |
25606253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 27043756 - 27043794
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
27043756 |
attgacttatttgagcttatctactgacataagttttgt |
27043794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 41336904 - 41336866
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
41336904 |
attgacttatttgagtttatctactcacataagttttgt |
41336866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 52315123 - 52315161
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
52315123 |
attgacttatttgagtttatctactgacgtaagttttgt |
52315161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 679436 - 679403
Alignment:
| Q |
64 |
aattgacttatttgagtttatctactgatataag |
97 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
679436 |
aattgacttatttgagtttatctactggtataag |
679403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 25447171 - 25447209
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25447171 |
attgacttatttgagtttatctactgacataagttttgt |
25447209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 33405118 - 33405155
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttg |
102 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
33405118 |
attgacttatttgagtttatctactgacataagttttg |
33405155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 26911735 - 26911699
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagtttt |
101 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26911735 |
attgacttatttgagtttatctactgacataagtttt |
26911699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 23545557 - 23545606
Alignment:
| Q |
212 |
atgaatctaaaaatgcaaaaattgcttataaatatgatcgaaatgagtaa |
261 |
Q |
| |
|
||||||||||||| |||||| ||||||||||| || ||||||||||||| |
|
|
| T |
23545557 |
atgaatctaaaaaaacaaaaagtgcttataaatgtggtcgaaatgagtaa |
23545606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 30672556 - 30672520
Alignment:
| Q |
212 |
atgaatctaaaaatgcaaaaattgcttataaatatga |
248 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
30672556 |
atgaatctaaaaatggaaaatttgcttataaatatga |
30672520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 34610735 - 34610771
Alignment:
| Q |
68 |
gacttatttgagtttatctactgatataagttttgta |
104 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
34610735 |
gacttatttgagcttatctactgacataagttttgta |
34610771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 36507018 - 36507050
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataag |
97 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
36507018 |
attggcttatttgagtttatctactgatataag |
36507050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000004; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 9210965 - 9210929
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagtttt |
101 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9210965 |
attgacttatttgagcttatctactgatataagtttt |
9210929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 19302488 - 19302527
Alignment:
| Q |
64 |
aattgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
19302488 |
aattgacttatttgagcttatctactgacataagttttgt |
19302527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 41040310 - 41040276
Alignment:
| Q |
64 |
aattgacttatttgagtttatctactgatataagt |
98 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
41040310 |
aattgatttatttgagtttatctactgatataagt |
41040276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 44822102 - 44822064
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
44822102 |
attgacttatttgagtttatctgctgacataagttttgt |
44822064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 34478336 - 34478291
Alignment:
| Q |
179 |
ttcattaaataaatgatgtatatgggctatattatgaatctaaaaa |
224 |
Q |
| |
|
|||||| | |||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
34478336 |
ttcatttactaaatgatgtatttggtctatattatgaatctaaaaa |
34478291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 43694493 - 43694530
Alignment:
| Q |
64 |
aattgacttatttgagtttatctactgatataagtttt |
101 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
43694493 |
aattgatttatttgagtttatctactaatataagtttt |
43694530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 1074194 - 1074232
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
1074194 |
attgacttatttgagtttatttactcatataagttttgt |
1074232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 38602471 - 38602433
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
38602471 |
attgacttatttgagcttatctactgacataagttttgt |
38602433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000006; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 9107234 - 9107196
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
9107234 |
attgacttatttgagtttatctagtgacataagttttgt |
9107196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 10640092 - 10640059
Alignment:
| Q |
70 |
cttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |
|
|
| T |
10640092 |
cttatttgagtttatctactgacataagttttgt |
10640059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 35445775 - 35445808
Alignment:
| Q |
70 |
cttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |
|
|
| T |
35445775 |
cttatttgagtttatctactgacataagttttgt |
35445808 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 6392581 - 6392613
Alignment:
| Q |
65 |
attgacttatttgagtttatctactgatataag |
97 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
6392581 |
attgacttatttgagtttatctactaatataag |
6392613 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 24089055 - 24089115
Alignment:
| Q |
153 |
atataaacaacttttgattatttatgttcattaaataaatgatgtatatgggctatattat |
213 |
Q |
| |
|
||||||||||||||| | | |||| ||||||| |||||||||||||| ||| | ||||||| |
|
|
| T |
24089055 |
atataaacaactttttactttttaggttcattcaataaatgatgtatgtggtccatattat |
24089115 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 35907846 - 35907906
Alignment:
| Q |
154 |
tataaacaacttttgattatttatgttcattaaataaatgatgtatatgggctatattatg |
214 |
Q |
| |
|
||||||||| |||||||| || | ||||||| ||| ||||||||||||| |||||||||| |
|
|
| T |
35907846 |
tataaacaaattttgatttttaaggttcattcaattaatgatgtatatgatctatattatg |
35907906 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 7351596 - 7351629
Alignment:
| Q |
64 |
aattgacttatttgagtttatctactgatataag |
97 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
7351596 |
aattgacttatttgagtttatctactgacataag |
7351629 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 1681855 - 1681891
Alignment:
| Q |
67 |
tgacttatttgagtttatctactgatataagttttgt |
103 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
1681855 |
tgacttatttgagtttatctattggtataagttttgt |
1681891 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 34910340 - 34910372
Alignment:
| Q |
70 |
cttatttgagtttatctactgatataagttttg |
102 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
34910340 |
cttatttgagtttatctactgatatcagttttg |
34910372 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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