View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2859R-Insertion-15 (Length: 93)
Name: NF2859R-Insertion-15
Description: NF2859R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2859R-Insertion-15 |
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| [»] chr4 (2 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 82; Significance: 3e-39; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 3e-39
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 32224709 - 32224624
Alignment:
| Q |
8 |
agcatattctcctacggtcttctgaacattagctgcagcatttcccacagttgtctggacaccagctgcagcatttcccactgttg |
93 |
Q |
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| T |
32224709 |
agcatattctcctacggtcttctgaacattagctgcagcatttcccacagttgtctggacaccagctgcagcatttcccacagttg |
32224624 |
T |
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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 32229568 - 32229491
Alignment:
| Q |
8 |
agcatattctcctacggtcttctgaacattagctgcagcatttcccacagttgtctggacaccagctgcagcatttcc |
85 |
Q |
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| T |
32229568 |
agcataatctcctacagtcttatgaactccagctgcagcatttcccaaagttttctgggcaccagaagcagcatttcc |
32229491 |
T |
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